CsaV3_1G015000 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G015000
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Protein FANTASTIC FOUR like
Location	chr1 : 10633709 .. 10634479 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCTGTGGAAGCCTGCAACACATTTTTGAAAACCCATTACCCGAAAATTCAACTCTCTTTGAACACCTCTCATCATGGAACCAGATAATGCCCTTGAAGCCGACCGAACCATCGTCATTTACAGAGATCTTTGGAGAGCTTCATTTCAAAGAGAGTTTCGTTCCCCATTCTTTTTCATCATTGTCGTCTTTGACAGAATCATCGAACTCTCCATCCGCTGTTGATGACATATGGAAAGAACCATCGTCAAATGGTGAACGTGAACCATCCAGCTTCCATAGGAAAAGCAATAGCTTCTCGTCGACCAATTCCGAAAGCTTGCAACTTTGCACAGAAGGGCTTGGATATGAAAGCTTAGATGATGTTGAGGATTTGAAAGGGGTGATGGATGAAAAGGAATGGCAGGAGGATGAAGAGGAAAGGACCTTAAAAAAACAGATTAATTATCCAAATTTGAAGCCTGGAATGATTAACAGGACAAAATTAGCAAATATGGAAGATTTTCCTCCACCAATTTCTTGTATGGGAAAGAGTGGAAAGCCTTGGGTAGGTTTCAAATCTTATAGGTATGGTGGAAGGTTTATATTGAAGGAAGTGAGAGTTCCCACCCACGAATTTCTACATGCTTCCAGAGAAAATGGACGTTTGAAACTGCATATTCTTGTACCAAATGAGCAGACCAGAGAAGGTGAGGATGAGGCCGACGACAACAACAAGAACTGTGAAAATACTATTGGGAAATGTAAGGTTGAAACTAGGCCATGA

mRNA sequence

ATGGCTGCCTGTGGAAGCCTGCAACACATTTTTGAAAACCCATTACCCGAAAATTCAACTCTCTTTGAACACCTCTCATCATGGAACCAGATAATGCCCTTGAAGCCGACCGAACCATCGTCATTTACAGAGATCTTTGGAGAGCTTCATTTCAAAGAGAGTTTCGTTCCCCATTCTTTTTCATCATTGTCGTCTTTGACAGAATCATCGAACTCTCCATCCGCTGTTGATGACATATGGAAAGAACCATCGTCAAATGGTGAACGTGAACCATCCAGCTTCCATAGGAAAAGCAATAGCTTCTCGTCGACCAATTCCGAAAGCTTGCAACTTTGCACAGAAGGGCTTGGATATGAAAGCTTAGATGATGTTGAGGATTTGAAAGGGGTGATGGATGAAAAGGAATGGCAGGAGGATGAAGAGGAAAGGACCTTAAAAAAACAGATTAATTATCCAAATTTGAAGCCTGGAATGATTAACAGGACAAAATTAGCAAATATGGAAGATTTTCCTCCACCAATTTCTTGTATGGGAAAGAGTGGAAAGCCTTGGGTAGGTTTCAAATCTTATAGGTATGGTGGAAGGTTTATATTGAAGGAAGTGAGAGTTCCCACCCACGAATTTCTACATGCTTCCAGAGAAAATGGACGTTTGAAACTGCATATTCTTGTACCAAATGAGCAGACCAGAGAAGGTGAGGATGAGGCCGACGACAACAACAAGAACTGTGAAAATACTATTGGGAAATGTAAGGTTGAAACTAGGCCATGA

Coding sequence (CDS)

ATGGCTGCCTGTGGAAGCCTGCAACACATTTTTGAAAACCCATTACCCGAAAATTCAACTCTCTTTGAACACCTCTCATCATGGAACCAGATAATGCCCTTGAAGCCGACCGAACCATCGTCATTTACAGAGATCTTTGGAGAGCTTCATTTCAAAGAGAGTTTCGTTCCCCATTCTTTTTCATCATTGTCGTCTTTGACAGAATCATCGAACTCTCCATCCGCTGTTGATGACATATGGAAAGAACCATCGTCAAATGGTGAACGTGAACCATCCAGCTTCCATAGGAAAAGCAATAGCTTCTCGTCGACCAATTCCGAAAGCTTGCAACTTTGCACAGAAGGGCTTGGATATGAAAGCTTAGATGATGTTGAGGATTTGAAAGGGGTGATGGATGAAAAGGAATGGCAGGAGGATGAAGAGGAAAGGACCTTAAAAAAACAGATTAATTATCCAAATTTGAAGCCTGGAATGATTAACAGGACAAAATTAGCAAATATGGAAGATTTTCCTCCACCAATTTCTTGTATGGGAAAGAGTGGAAAGCCTTGGGTAGGTTTCAAATCTTATAGGTATGGTGGAAGGTTTATATTGAAGGAAGTGAGAGTTCCCACCCACGAATTTCTACATGCTTCCAGAGAAAATGGACGTTTGAAACTGCATATTCTTGTACCAAATGAGCAGACCAGAGAAGGTGAGGATGAGGCCGACGACAACAACAAGAACTGTGAAAATACTATTGGGAAATGTAAGGTTGAAACTAGGCCATGA

Protein sequence

MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSFSSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNNKNCENTIGKCKVETRP

Homology

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BLAST of CsaV3_1G015000 vs. NCBI nr
Match: XP_004139585.1 (PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus] >KGN64947.1 hypothetical protein Csa_1G166760 [Cucumis sativus])

HSP 1 Score: 521.5 bits (1342), Expect = 1.6e-144
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60
           MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF
Sbjct: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60

Query: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120
           SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES
Sbjct: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120

Query: 121 LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS 180
           LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS
Sbjct: 121 LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS 180

Query: 181 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN 240
           GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN
Sbjct: 181 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN 240

Query: 241 KNCENTIGKCKVETRP 257
           KNCENTIGKCKVETRP
Sbjct: 241 KNCENTIGKCKVETRP 256

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BLAST of CsaV3_1G015000 vs. NCBI nr
Match: XP_008461212.1 (PREDICTED: protein FAF-like, chloroplastic [Cucumis melo])

HSP 1 Score: 494.2 bits (1271), Expect = 2.7e-136
Identity = 244/257 (94.94%), Postives = 249/257 (96.89%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60
           MAACGSLQHIFENPLPEN TL EHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF
Sbjct: 1   MAACGSLQHIFENPLPENPTLLEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60

Query: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120
           SSLSSLTESSNS SA DD+WKEP SNGEREPS+FHRKSNSFSSTNSESLQLCTEGLGYES
Sbjct: 61  SSLSSLTESSNSTSAADDLWKEPLSNGEREPSNFHRKSNSFSSTNSESLQLCTEGLGYES 120

Query: 121 LDDVEDLKGVMDEKEW-QEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGK 180
           LDDVEDLKGVMDEKEW +EDEEERTLKKQI YPNLKPGMINRTK ANMEDFPPPISCMGK
Sbjct: 121 LDDVEDLKGVMDEKEWPKEDEEERTLKKQIQYPNLKPGMINRTKSANMEDFPPPISCMGK 180

Query: 181 SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN 240
           SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN
Sbjct: 181 SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN 240

Query: 241 NKNCENTIGKCKVETRP 257
           ++NCENTIGKCKVETRP
Sbjct: 241 HENCENTIGKCKVETRP 257

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BLAST of CsaV3_1G015000 vs. NCBI nr
Match: XP_022142424.1 (protein FANTASTIC FOUR 3-like [Momordica charantia])

HSP 1 Score: 339.3 bits (869), Expect = 1.1e-89
Identity = 178/236 (75.42%), Postives = 197/236 (83.47%), Query Frame = 0


Query: 2   AACGSLQHIFENPLPE-NSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 61
           AACGSLQHIFE PLPE N +L E LSSWNQI+P+KPTE SSFTEIFGELHFKESFVP S 
Sbjct: 3   AACGSLQHIFETPLPEKNPSLLETLSSWNQILPVKPTEQSSFTEIFGELHFKESFVPPSP 62

Query: 62  SSLSSLTESSNSPSAV--DDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGY 121
           S     T+S+ + +AV  +  WKEP  NG  E SSFH +SNSFSSTNSESLQLCTEGLGY
Sbjct: 63  SLSPPFTDSNAAAAAVSANSPWKEPFLNG--ESSSFHGRSNSFSSTNSESLQLCTEGLGY 122

Query: 122 ESLDDVEDLKGVMDEKEWQEDEEERTL---KKQINYPNLKPGMINRTKLANMEDFPPPIS 181
           ESLDDVEDLKG M+E+EWQ + EE ++   K+QI Y NLKPGMI R++ ANM DFPPPIS
Sbjct: 123 ESLDDVEDLKGEMEEEEWQREVEEESVALKKQQIQYQNLKPGMIRRSRSANMADFPPPIS 182

Query: 182 CMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTRE 232
           CMGKSG PWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHIL+PNEQT E
Sbjct: 183 CMGKSGMPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILLPNEQTIE 236

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BLAST of CsaV3_1G015000 vs. NCBI nr
Match: XP_022967100.1 (protein FAF-like, chloroplastic [Cucurbita maxima])

HSP 1 Score: 326.6 bits (836), Expect = 7.4e-86
Identity = 177/236 (75.00%), Postives = 192/236 (81.36%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPT-EPSSFTEIFGELHFKESFVPHS 60
           MAACGSLQHIFE PLPEN TL + LSSW+QI+ + P+ + SSFTEIFGELHFKESFVP  
Sbjct: 1   MAACGSLQHIFETPLPENPTLLDTLSSWSQIISVTPSQQQSSFTEIFGELHFKESFVPPL 60

Query: 61  FSSLSSLTESSNSPSA--VDDI-WKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGL 120
              LS    +S SP+A  VD I WKEPSSNG  E SS H +SNSFSSTNSESLQLCTEGL
Sbjct: 61  SPQLSLTESNSPSPAAATVDIIPWKEPSSNG--ESSSSHGRSNSFSSTNSESLQLCTEGL 120

Query: 121 GYESLDDVEDLKGVMDEKEWQE-DEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPIS 180
           GYESLDD EDL+G MDE+EWQ       TLKKQI  P   PGMI RTK AN++DFPPPIS
Sbjct: 121 GYESLDDGEDLEGGMDEQEWQRXXXXXXTLKKQIQDPIWNPGMIKRTKSANVDDFPPPIS 180

Query: 181 CMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTRE 232
           CMG SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILVPN+QTRE
Sbjct: 181 CMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTRE 234

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BLAST of CsaV3_1G015000 vs. NCBI nr
Match: XP_022945205.1 (uncharacterized protein LOC111449517 isoform X1 [Cucurbita moschata])

HSP 1 Score: 314.3 bits (804), Expect = 3.8e-82
Identity = 171/237 (72.15%), Postives = 186/237 (78.48%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTE-PSSFTEIFGELHFKESFVPHS 60
           MAACGSLQHIFE PLPEN TL + LSSW+QI+ + P+E  SSFTEIFGELHFKESFVP  
Sbjct: 73  MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVPPL 132

Query: 61  FSSLSSLTESSNSPSAVDDI-WKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGY 120
              LS    +S SP+AV  I WKEP SNG  E SS H +SNSFSSTNSESLQLCTEGLGY
Sbjct: 133 SPQLSLTESNSPSPAAVGIIPWKEPLSNG--ESSSSHGRSNSFSSTNSESLQLCTEGLGY 192

Query: 121 ESLDDVEDLKGVMD-EKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCM 180
           ESLDD EDLKG MD              KKQI  P  KPGMI RTK AN++DFPPPISCM
Sbjct: 193 ESLDDGEDLKGGMDXXXXXXXXXXXXXXKKQIQNPIWKPGMIKRTKSANVDDFPPPISCM 252

Query: 181 GKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGED 235
           G SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILVPN+QTR+ ++
Sbjct: 253 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTRDAKE 307

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BLAST of CsaV3_1G015000 vs. TAIR10
Match: AT5G22390.1 (Protein of unknown function (DUF3049))

HSP 1 Score: 78.6 bits (192), Expect = 6.4e-15
Identity = 72/228 (31.58%), Postives = 95/228 (41.67%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENS--TLFEHLSS---WNQIMPLKPT-----EPSSFTEIFGELH 60
           MAA GS   IF+NP  +NS  +  + LSS   WN    L  T      P  FTEIFGELH
Sbjct: 1   MAAYGSFHRIFDNPRQDNSPKSFLDTLSSSSPWNPSKGLHVTTHHDETPPPFTEIFGELH 60

Query: 61  FKESFVPHSFSSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQ 120
           F+ES                                     SS+ +     +S  + SLQ
Sbjct: 61  FRES-----------------------------------SHSSYEK-----TSAENSSLQ 120

Query: 121 LCTEGLGYESLDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDF 180
           LCTEGLG ES   +ED     ++                             +    +++
Sbjct: 121 LCTEGLGSESYYGLED-----EKVNXXXXXXXXXXXXXXXXXXXXXXXXXXXRRKERKEY 175

Query: 181 PPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRL 219
           PP ++ M         FK+YR  GR +L+EVR+P  EFL ASRE+GRL
Sbjct: 181 PPAMTRM--------SFKTYRKEGRLVLEEVRIPRREFLRASREDGRL 175

[Close]

BLAST of CsaV3_1G015000 vs. TAIR10
Match: AT1G54740.1 (Protein of unknown function (DUF3049))

HSP 1 Score: 58.9 bits (141), Expect = 5.2e-09
Identity = 42/126 (33.33%), Postives = 58/126 (46.03%), Query Frame = 0


Query: 104 TNSESLQLCTEGLGYESLD------DVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPG 163
           T S  L LCTE LG+ES D      +VE+      E E +  E +R   K+         
Sbjct: 31  TQSHGLMLCTEYLGFESYDMRMSDNEVENKMTCHAEVETERVEAKRRKTKE--------- 90

Query: 164 MINRTKLANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGR 223
             N    A  + FPPP+S +   G+ +   +  R  GR  L +V V   E  H SR +GR
Sbjct: 91  --NVVVQAQKKQFPPPLSSLNSRGQRYFYLRPVRKDGRLELTQVMVDRPEIFHVSRVDGR 145

[Close]

BLAST of CsaV3_1G015000 vs. TAIR10
Match: AT1G22110.1 (structural constituent of ribosome)

HSP 1 Score: 53.5 bits (127), Expect = 2.2e-07
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 169 DFPPPISCMGKSGK-----PWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHIL 224
           +FPPPI  + ++G      PWV  +     GR IL+E +V  HE+  A+R NGRL LH++
Sbjct: 101 EFPPPIPLLAQTGNLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTLHLV 160

[Close]

BLAST of CsaV3_1G015000 vs. TAIR10
Match: AT5G19260.1 (Protein of unknown function (DUF3049))

HSP 1 Score: 50.8 bits (120), Expect = 1.4e-06
Identity = 42/145 (28.97%), Postives = 65/145 (44.83%), Query Frame = 0


Query: 96  RKSNSFSSTNSESLQLCTEGLGYESLDDVEDLK-----GVMDEKEWQEDEEERTLKKQIN 155
           ++ +S  + + +SL LCTE LG ES  DV D+       V  +   +   E RTLK    
Sbjct: 100 QRPSSCRALSDQSLALCTENLGSESGSDVTDIDELFSLDVQTKNLGETTTETRTLK---- 159

Query: 156 YPNLKPGMINRTKLANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHE-FL 215
                    +R +  +  D PPP++ M   G   +  + +R  GR ++     P      
Sbjct: 160 ---------SRKRSVSPSDLPPPLTTM--RGFQCIQMRPHRENGRLVMTATNAPPRNGCF 219

Query: 216 HASRENGRLKLHILVPNEQTREGED 235
            A R NGRL+L IL  + +  E E+
Sbjct: 220 QADRSNGRLRLSILKDSNEFVENEE 229

[Close]

BLAST of CsaV3_1G015000 vs. TAIR10
Match: AT5G22090.1 (Protein of unknown function (DUF3049))

HSP 1 Score: 42.4 bits (98), Expect = 5.1e-04
Identity = 42/163 (25.77%), Postives = 65/163 (39.88%), Query Frame = 0


Query: 91  PSSFHRKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGVMDEKEWQ-EDEEERTLKKQI 150
           P   H      SS + +SL++CTE LG E+  D        +  + + E  +E  L   +
Sbjct: 131 PPYVHPLMKRASSLSEKSLEICTESLGSETGCDGFSSHASSETGDAEIEIHDETNLVVNV 190

Query: 151 NYPNLKPGMI--------------NRTKLANMEDFPPPISCMGKSGKPWVGFKSYRYGGR 210
               ++                  N         FPPPI  +       +  K+ R  GR
Sbjct: 191 TETKVEXXXXXXXXXXXXXXXXXPNHIIELPPGSFPPPIRSLSSQSGSSLHMKTRRDNGR 250

Query: 211 FILKEVRVPTHEFLHASRENGRLKLHIL-VPNEQTREGEDEAD 238
            +L+ V +P+H    A R++GRL L    + NE   + EDE D
Sbjct: 251 LVLEAVSMPSHNNFSAKRQDGRLLLTFAEISNEPNYDKEDEID 293

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BLAST of CsaV3_1G015000 vs. Swiss-Prot
Match: sp|Q6NMR8|FAF3_ARATH (Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana OX=3702 GN=FAF3 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.6e-05
Identity = 42/145 (28.97%), Postives = 65/145 (44.83%), Query Frame = 0


Query: 96  RKSNSFSSTNSESLQLCTEGLGYESLDDVEDLK-----GVMDEKEWQEDEEERTLKKQIN 155
           ++ +S  + + +SL LCTE LG ES  DV D+       V  +   +   E RTLK    
Sbjct: 100 QRPSSCRALSDQSLALCTENLGSESGSDVTDIDELFSLDVQTKNLGETTTETRTLK---- 159

Query: 156 YPNLKPGMINRTKLANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHE-FL 215
                    +R +  +  D PPP++ M   G   +  + +R  GR ++     P      
Sbjct: 160 ---------SRKRSVSPSDLPPPLTTM--RGFQCIQMRPHRENGRLVMTATNAPPRNGCF 219

Query: 216 HASRENGRLKLHILVPNEQTREGED 235
            A R NGRL+L IL  + +  E E+
Sbjct: 220 QADRSNGRLRLSILKDSNEFVENEE 229

[Close]

BLAST of CsaV3_1G015000 vs. TrEMBL
Match: tr|A0A0A0LVU3|A0A0A0LVU3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G166760 PE=4 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 1.0e-144
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60
           MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF
Sbjct: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60

Query: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120
           SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES
Sbjct: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120

Query: 121 LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS 180
           LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS
Sbjct: 121 LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS 180

Query: 181 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN 240
           GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN
Sbjct: 181 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN 240

Query: 241 KNCENTIGKCKVETRP 257
           KNCENTIGKCKVETRP
Sbjct: 241 KNCENTIGKCKVETRP 256

[Close]

BLAST of CsaV3_1G015000 vs. TrEMBL
Match: tr|A0A1S3CEL7|A0A1S3CEL7_CUCME (protein FAF-like, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499860 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 1.8e-136
Identity = 244/257 (94.94%), Postives = 249/257 (96.89%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60
           MAACGSLQHIFENPLPEN TL EHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF
Sbjct: 1   MAACGSLQHIFENPLPENPTLLEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60

Query: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120
           SSLSSLTESSNS SA DD+WKEP SNGEREPS+FHRKSNSFSSTNSESLQLCTEGLGYES
Sbjct: 61  SSLSSLTESSNSTSAADDLWKEPLSNGEREPSNFHRKSNSFSSTNSESLQLCTEGLGYES 120

Query: 121 LDDVEDLKGVMDEKEW-QEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGK 180
           LDDVEDLKGVMDEKEW +EDEEERTLKKQI YPNLKPGMINRTK ANMEDFPPPISCMGK
Sbjct: 121 LDDVEDLKGVMDEKEWPKEDEEERTLKKQIQYPNLKPGMINRTKSANMEDFPPPISCMGK 180

Query: 181 SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN 240
           SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN
Sbjct: 181 SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN 240

Query: 241 NKNCENTIGKCKVETRP 257
           ++NCENTIGKCKVETRP
Sbjct: 241 HENCENTIGKCKVETRP 257

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BLAST of CsaV3_1G015000 vs. TrEMBL
Match: tr|A0A061GV87|A0A061GV87_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_041386 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56
Identity = 146/273 (53.48%), Postives = 163/273 (59.71%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMP-LKPTEPSSFTEIFGELHFKE------ 60
           MAACGSLQHIFENPLPEN TL E LSSWNQI P +KP EPSSFTEIFGELHFKE      
Sbjct: 1   MAACGSLQHIFENPLPENPTLLESLSSWNQIKPAIKPIEPSSFTEIFGELHFKENSKSSS 60

Query: 61  --SFVPHSFSSLSSLTESSNSPS---AVDDIWKEPSSNGERE--PSSF------------ 120
             SF    FSS S +  S  + +   + +D + E   N  R   P  F            
Sbjct: 61  ASSFPISPFSSTSIIDLSPQNSAFKLSKNDTFNENDENNNRSSPPEIFPSTPEITKYTNC 120

Query: 121 HRKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNL 180
           H+KS SF S NSESLQLCTEGLG+ES DDVEDLK  M E  WQ  EE             
Sbjct: 121 HKKSESF-SWNSESLQLCTEGLGFESSDDVEDLKNEMKE-GWQSKEE------------- 180

Query: 181 KPGMINRTKLANMED--------------FPPPISCMGKSGKPWVGFKSYRYGGRFILKE 234
           K   IN TK    E+              FPPPISC+GKSGKPWV FKSYR  GRF+LKE
Sbjct: 181 KESSINTTKHTTTENLCGEFRRPRTRGGAFPPPISCIGKSGKPWVCFKSYRQDGRFVLKE 240

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BLAST of CsaV3_1G015000 vs. TrEMBL
Match: tr|A0A2C9VY91|A0A2C9VY91_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G003000 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.5e-54
Identity = 133/262 (50.76%), Postives = 158/262 (60.31%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKE------- 60
           MAACGSL HIFENPLPE   L E LSSWNQI P+K  + SSFTEIFGELHFKE       
Sbjct: 1   MAACGSLHHIFENPLPETPALLESLSSWNQIKPVKSIDQSSFTEIFGELHFKENSHSSSS 60

Query: 61  --SFVPHSFSSLSSL----------------------TESSNSPSAVDDIWKEPSSNGER 120
             SF   SFSS SS                        ES NSPS   D +   S N   
Sbjct: 61  SPSFPVSSFSSPSSSFIDLIPHPPTSNLNKNGNLGNGHESKNSPSL--DFFSTTSKN--H 120

Query: 121 EPSSFHRKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGVMDEKEWQEDEEERTLKKQI 180
           + +  H+  + FS  N ESLQLCTEGLG+ES DDVED+K  ++   WQ  EE   + +  
Sbjct: 121 QYTGGHKNGDIFSPRNYESLQLCTEGLGFESFDDVEDMKNDIN-GNWQHQEENVNITRHS 180

Query: 181 NYPNLKPGMINRTKLANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFL 232
              N   G I R +L+    FPPPISC+GKSGKPWV FKSYR  GRF+LK+VR+P+ EFL
Sbjct: 181 TLEN-PSGEIRRPRLSG-RAFPPPISCIGKSGKPWVSFKSYRQDGRFVLKQVRIPSQEFL 240

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BLAST of CsaV3_1G015000 vs. TrEMBL
Match: tr|B9SCV3|B9SCV3_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1281760 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.5e-53
Identity = 128/265 (48.30%), Postives = 159/265 (60.00%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKES------ 60
           MAACGSLQHIFE PLPE  TL E LSSWN I  +KP E SSFTEIFGELHFKE+      
Sbjct: 1   MAACGSLQHIFEKPLPETPTLLESLSSWNPIKTIKPIEQSSFTEIFGELHFKENSEXXXX 60

Query: 61  ------------FVPHSFSSLSSLTESSN--------------SPSAVDDIWKEPSSNGE 120
                           SF  L    E+SN                +++D +   P +   
Sbjct: 61  XXXXXXXXXXXXXXXXSFIGLIPEAETSNLNRNDSFDSGCHTKKSTSLDSLLSTPKN--- 120

Query: 121 REPSSFHRKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGVMDEKEWQEDEEERTLKKQ 180
            + +  HR  +SFS  N ESLQLCTEGLG+ES DDVEDLK  M+E    ++E+    +  
Sbjct: 121 YQYAGCHRNGDSFSPRNYESLQLCTEGLGFESFDDVEDLKNDMNENRQHQEEKAGITRHS 180

Query: 181 INYPNLKPGMINRTKLANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEF 234
           +     + G I R++L  +  FPPPISC+GKSGKPWV FKSYR+ GRF+LK+VR+P+ EF
Sbjct: 181 V--LESQAGEIRRSRL-RIGAFPPPISCIGKSGKPWVSFKSYRHDGRFVLKQVRIPSQEF 240

The following BLAST results are available for this feature:

BLAST of CsaV3_1G015000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139585.1	1.6e-144	100.00	PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus] >KGN64947.1 hypothe...	[more]
XP_008461212.1	2.7e-136	94.94	PREDICTED: protein FAF-like, chloroplastic [Cucumis melo]	[more]
XP_022142424.1	1.1e-89	75.42	protein FANTASTIC FOUR 3-like [Momordica charantia]	[more]
XP_022967100.1	7.4e-86	75.00	protein FAF-like, chloroplastic [Cucurbita maxima]	[more]
XP_022945205.1	3.8e-82	72.15	uncharacterized protein LOC111449517 isoform X1 [Cucurbita moschata]	[more]

BLAST of CsaV3_1G015000 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22390.1	6.4e-15	31.58	Protein of unknown function (DUF3049)	[more]
AT1G54740.1	5.2e-09	33.33	Protein of unknown function (DUF3049)	[more]
AT1G22110.1	2.2e-07	41.67	structural constituent of ribosome	[more]
AT5G19260.1	1.4e-06	28.97	Protein of unknown function (DUF3049)	[more]
AT5G22090.1	5.1e-04	25.77	Protein of unknown function (DUF3049)	[more]

BLAST of CsaV3_1G015000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NMR8\|FAF3_ARATH	2.6e-05	28.97	Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana OX=3702 GN=FAF3 PE=2 SV=1	[more]

BLAST of CsaV3_1G015000 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LVU3\|A0A0A0LVU3_CUCSA	1.0e-144	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G166760 PE=4 SV=1	[more]
tr\|A0A1S3CEL7\|A0A1S3CEL7_CUCME	1.8e-136	94.94	protein FAF-like, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499860 PE=4 SV=...	[more]
tr\|A0A061GV87\|A0A061GV87_THECC	1.1e-56	53.48	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_041386 PE=4 SV=1	[more]
tr\|A0A2C9VY91\|A0A2C9VY91_MANES	6.5e-54	50.76	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G003000 PE=4 SV=...	[more]
tr\|B9SCV3\|B9SCV3_RICCO	2.5e-53	48.30	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1281760 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021410	FAF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G015000.1	CsaV3_1G015000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 170..221 e-value: 2.6E-20 score: 72.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..256
None	No IPR available	PANTHER	PTHR33155	FAMILY NOT NAMED	coord: 1..242
None	No IPR available	PANTHER	PTHR33155:SF9	SUBFAMILY NOT NAMED	coord: 1..242

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G015000	CSPI01G14890	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G015000	Cucsa.319780	Cucumber (Gy14) v1	cgycucB496
CsaV3_1G015000	CmaCh18G006510	Cucurbita maxima (Rimu)	cmacucB0473
CsaV3_1G015000	CmaCh02G013210	Cucurbita maxima (Rimu)	cmacucB0694
CsaV3_1G015000	CsGy1G014700	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G015000	Cla008637	Watermelon (97103) v1	cucwmB074
CsaV3_1G015000	MELO3C004685	Melon (DHL92) v3.5.1	cucmeB010
CsaV3_1G015000	ClCG01G012170	Watermelon (Charleston Gray)	cucwcgB019
CsaV3_1G015000	ClCG02G022240	Watermelon (Charleston Gray)	cucwcgB030
CsaV3_1G015000	Lsi03G001260	Bottle gourd (USVL1VR-Ls)	cuclsiB050
CsaV3_1G015000	Lsi10G011540	Bottle gourd (USVL1VR-Ls)	cuclsiB005
CsaV3_1G015000	MELO3C004685.2	Melon (DHL92) v3.6.1	cucmedB009
CsaV3_1G015000	Cla97C01G011530	Watermelon (97103) v2	cucwmbB006
CsaV3_1G015000	Cla97C02G048340	Watermelon (97103) v2	cucwmbB025
CsaV3_1G015000	Bhi08G000032	Wax gourd	cucwgoB051

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_1G015000	CsaV3_1G015910	Cucumber (Chinese Long) v3	cuccucB001

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G015000	Cucumber (Chinese Long) v3	cuccucB023
CsaV3_1G015000	Cucumber (Chinese Long) v3	cuccucB046
CsaV3_1G015000	Silver-seed gourd	carcucB0000
CsaV3_1G015000	Cucurbita maxima (Rimu)	cmacucB0476
CsaV3_1G015000	Cucurbita maxima (Rimu)	cmacucB0962
CsaV3_1G015000	Cucurbita moschata (Rifu)	cmocucB0460
CsaV3_1G015000	Cucurbita moschata (Rifu)	cmocucB0951
CsaV3_1G015000	Cucurbita pepo (Zucchini)	cpecucB0024
CsaV3_1G015000	Cucurbita pepo (Zucchini)	cpecucB1044
CsaV3_1G015000	Bottle gourd (USVL1VR-Ls)	cuclsiB021
CsaV3_1G015000	Melon (DHL92) v3.5.1	cucmeB072
CsaV3_1G015000	Watermelon (97103) v1	cucwmB009
CsaV3_1G015000	Watermelon (97103) v1	cucwmB049
CsaV3_1G015000	Watermelon (97103) v1	cucwmB063
CsaV3_1G015000	Watermelon (97103) v2	cucwmbB008
CsaV3_1G015000	Watermelon (97103) v2	cucwmbB017