Csa1G166760 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G166760
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Protein FANTASTIC FOUR 3; contains IPR021410 (Protein of unknown function DUF3049)
Location	Chr1 : 10363098 .. 10364015 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCATCTTCTTCATTTTCCATTTCAACCATATAATAAACAGCACAGTTTATCAACTTCTCTTTCTCTCTTTCTATCTATATATCTCTCTCTCTGCAAACACTGCAGAGACTGGATAGCCATGGCTGCCTGTGGAAGCCTGCAACACATTTTTGAAAACCCATTACCCGAAAATTCAACTCTCTTTGAACACCTCTCATCATGGAACCAGATAATGCCCTTGAAGCCGACCGAACCATCGTCATTTACAGAGATCTTTGGAGAGCTTCATTTCAAAGAGAGTTTCGTTCCCCATTCTTTTTCATCATTGTCGTCTTTGACAGAATCATCGAACTCTCCATCCGCTGTTGATGACATATGGAAAGAACCATCGTCAAATGGTGAACGTGAACCATCCAGCTTCCATAGGAAAAGCAATAGCTTCTCGTCGACCAATTCCGAAAGCTTGCAACTTTGCACAGAAGGGCTTGGATATGAAAGCTTAGATGATGTTGAGGATTTGAAAGGGGTGATGGATGAAAAGGAATGGCAGGAGGATGAAGAGGAAAGGACCTTAAAAAAACAGATTAATTATCCAAATTTGAAGCCTGGAATGATTAACAGGACAAAATTAGCAAATATGGAAGATTTTCCTCCACCAATTTCTTGTATGGGAAAGAGTGGAAAGCCTTGGGTAGGTTTCAAATCTTATAGGTATGGTGGAAGGTTTATATTGAAGGAAGTGAGAGTTCCCACCCACGAATTTCTACATGCTTCCAGAGAAAATGGACGTTTGAAACTGCATATTCTTGTACCAAATGAGCAGACCAGAGAAGGTGAGGATGAGGCCGACGACAACAACAAGAACTGTGAAAATACTATTGGGAAATGTAAGGTTGAAACTAGGCCATGATGAAATAAGAGGCAATCACTTTCTTAG

mRNA sequence

ATGGCTGCCTGTGGAAGCCTGCAACACATTTTTGAAAACCCATTACCCGAAAATTCAACTCTCTTTGAACACCTCTCATCATGGAACCAGATAATGCCCTTGAAGCCGACCGAACCATCGTCATTTACAGAGATCTTTGGAGAGCTTCATTTCAAAGAGAGTTTCGTTCCCCATTCTTTTTCATCATTGTCGTCTTTGACAGAATCATCGAACTCTCCATCCGCTGTTGATGACATATGGAAAGAACCATCGTCAAATGGTGAACGTGAACCATCCAGCTTCCATAGGAAAAGCAATAGCTTCTCGTCGACCAATTCCGAAAGCTTGCAACTTTGCACAGAAGGGCTTGGATATGAAAGCTTAGATGATGTTGAGGATTTGAAAGGGGTGATGGATGAAAAGGAATGGCAGGAGGATGAAGAGGAAAGGACCTTAAAAAAACAGATTAATTATCCAAATTTGAAGCCTGGAATGATTAACAGGACAAAATTAGCAAATATGGAAGATTTTCCTCCACCAATTTCTTGTATGGGAAAGAGTGGAAAGCCTTGGGTAGGTTTCAAATCTTATAGGTATGGTGGAAGGTTTATATTGAAGGAAGTGAGAGTTCCCACCCACGAATTTCTACATGCTTCCAGAGAAAATGGACGTTTGAAACTGCATATTCTTGTACCAAATGAGCAGACCAGAGAAGGTGAGGATGAGGCCGACGACAACAACAAGAACTGTGAAAATACTATTGGGAAATGTAAGGTTGAAACTAGGCCATGA

Coding sequence (CDS)

ATGGCTGCCTGTGGAAGCCTGCAACACATTTTTGAAAACCCATTACCCGAAAATTCAACTCTCTTTGAACACCTCTCATCATGGAACCAGATAATGCCCTTGAAGCCGACCGAACCATCGTCATTTACAGAGATCTTTGGAGAGCTTCATTTCAAAGAGAGTTTCGTTCCCCATTCTTTTTCATCATTGTCGTCTTTGACAGAATCATCGAACTCTCCATCCGCTGTTGATGACATATGGAAAGAACCATCGTCAAATGGTGAACGTGAACCATCCAGCTTCCATAGGAAAAGCAATAGCTTCTCGTCGACCAATTCCGAAAGCTTGCAACTTTGCACAGAAGGGCTTGGATATGAAAGCTTAGATGATGTTGAGGATTTGAAAGGGGTGATGGATGAAAAGGAATGGCAGGAGGATGAAGAGGAAAGGACCTTAAAAAAACAGATTAATTATCCAAATTTGAAGCCTGGAATGATTAACAGGACAAAATTAGCAAATATGGAAGATTTTCCTCCACCAATTTCTTGTATGGGAAAGAGTGGAAAGCCTTGGGTAGGTTTCAAATCTTATAGGTATGGTGGAAGGTTTATATTGAAGGAAGTGAGAGTTCCCACCCACGAATTTCTACATGCTTCCAGAGAAAATGGACGTTTGAAACTGCATATTCTTGTACCAAATGAGCAGACCAGAGAAGGTGAGGATGAGGCCGACGACAACAACAAGAACTGTGAAAATACTATTGGGAAATGTAAGGTTGAAACTAGGCCATGA

Protein sequence

MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSFSSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNNKNCENTIGKCKVETRP*

Homology

[Close]

BLAST of Csa1G166760 vs. Swiss-Prot
Match: FAF3_ARATH (Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana GN=FAF3 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.0e-11
Identity = 53/182 (29.12%), Postives = 84/182 (46.15%), Query Frame = 1


Query: 60  FSSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYE 119
           +SSL SL+  S+S +       + +++ E+E S + ++ +S  + + +SL LCTE LG E
Sbjct: 71  WSSLQSLSSGSSSST-------KTTTSSEKESSYYVQRPSSCRALSDQSLALCTENLGSE 130

Query: 120 SLDDVEDLK-----GVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPI 179
           S  DV D+       V  +   +   E RTLK             +R +  +  D PPP+
Sbjct: 131 SGSDVTDIDELFSLDVQTKNLGETTTETRTLK-------------SRKRSVSPSDLPPPL 190

Query: 180 SCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHE-FLHASRENGRLKLHILVPNEQTREGE 236
           + M   G   +  + +R  GR ++     P       A R NGRL+L IL  + +  E E
Sbjct: 191 TTM--RGFQCIQMRPHRENGRLVMTATNAPPRNGCFQADRSNGRLRLSILKDSNEFVENE 230

[Close]

BLAST of Csa1G166760 vs. TrEMBL
Match: A0A0A0LVU3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166760 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 2.4e-148
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60
           MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF
Sbjct: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60

Query: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120
           SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES
Sbjct: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120

Query: 121 LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS 180
           LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS
Sbjct: 121 LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS 180

Query: 181 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN 240
           GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN
Sbjct: 181 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN 240

Query: 241 KNCENTIGKCKVETRP 257
           KNCENTIGKCKVETRP
Sbjct: 241 KNCENTIGKCKVETRP 256

[Close]

BLAST of Csa1G166760 vs. TrEMBL
Match: B9SCV3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1281760 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.8e-59
Identity = 138/287 (48.08%), Postives = 173/287 (60.28%), Query Frame = 1


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60
           MAACGSLQHIFE PLPE  TL E LSSWN I  +KP E SSFTEIFGELHFKE+    S 
Sbjct: 1   MAACGSLQHIFEKPLPETPTLLESLSSWNPIKTIKPIEQSSFTEIFGELHFKENSESSSS 60

Query: 61  S---SLSSLTESSNSPSAVDDIWKEPSSNGEREPS------------------------- 120
           S    + S + SS S S +  I +  +SN  R  S                         
Sbjct: 61  SPSFPIPSFSSSSPSSSFIGLIPEAETSNLNRNDSFDSGCHTKKSTSLDSLLSTPKNYQY 120

Query: 121 -SFHRKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGVMDEKEWQEDEEERTLKKQINY 180
              HR  +SFS  N ESLQLCTEGLG+ES DDVEDLK  M+E    ++E+    +  +  
Sbjct: 121 AGCHRNGDSFSPRNYESLQLCTEGLGFESFDDVEDLKNDMNENRQHQEEKAGITRHSV-- 180

Query: 181 PNLKPGMINRTKLANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHA 240
              + G I R++L  +  FPPPISC+GKSGKPWV FKSYR+ GRF+LK+VR+P+ EFLHA
Sbjct: 181 LESQAGEIRRSRL-RIGAFPPPISCIGKSGKPWVSFKSYRHDGRFVLKQVRIPSQEFLHA 240

Query: 241 SRENGRLKLHILVPNE---QTREGEDE--ADDNNKNCENTIGKCKVE 254
            RE+GRLKLH + PN+   +  EGE+E   +D+ +     IG  +V+
Sbjct: 241 HREDGRLKLHFVQPNDGIHEEEEGEEENFTEDDEQEENEEIGNKEVQ 284

[Close]

BLAST of Csa1G166760 vs. TrEMBL
Match: F6HHF4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00570 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.6e-59
Identity = 140/289 (48.44%), Postives = 177/289 (61.25%), Query Frame = 1


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFV---- 60
           MAACGSLQHIFE PLPEN TL + LSSWNQI  +KP E  SFTEIFGELHFKE+      
Sbjct: 1   MAACGSLQHIFEKPLPENPTLMDTLSSWNQIKSMKPPEQPSFTEIFGELHFKENSELLSS 60

Query: 61  --------PHSFSSLSSLTESSNSPSAVD----------DIWKEPS--SNGEREPS-SFH 120
                   P + SS SSL+ +S++ S +D          + W E    + G   P  S H
Sbjct: 61  SSYLSSPHPPTSSSSSSLSSTSSTSSLIDFNPQLRIEKNENWGEKGEENKGPLNPYVSRH 120

Query: 121 RKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKG-VMDEKEWQEDEEERTLKKQINYPNL 180
           R S+SFSS  SESLQLCTEGLG+ES DDVED+   + D+ E QE+   R   ++  Y   
Sbjct: 121 RNSDSFSSMKSESLQLCTEGLGFESCDDVEDVHNEIKDDWENQEERVTRHSPRENAYTEF 180

Query: 181 KPGMINRTKLANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRE 240
           +    +RT+      FPPPISC+GKSGKPWV FKSYR+ GRF+LKE+R+P  E LHA RE
Sbjct: 181 RR---SRTQGGA---FPPPISCIGKSGKPWVSFKSYRHDGRFVLKEIRIPNQELLHACRE 240

Query: 241 NGRLKLHILVPNE----------QTREGEDEADDNNKNCENTIGKCKVE 254
           +GRLKLH + P+E          +  + EDE DDN++   +  G+ + E
Sbjct: 241 DGRLKLHFVQPDEILEEDEEQDVEDTDNEDEYDDNDEEDNDENGEHEAE 283

[Close]

BLAST of Csa1G166760 vs. TrEMBL
Match: A0A067KDV5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12692 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.8e-58
Identity = 136/275 (49.45%), Postives = 174/275 (63.27%), Query Frame = 1


Query: 1   MAACGSLQHIFENPLPEN-STLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKE------ 60
           MAACGSLQHIFE PL +  +TL E LSSWNQI P+KP E SSFTEIFGELHF+E      
Sbjct: 1   MAACGSLQHIFEKPLSQTPATLLESLSSWNQIKPVKPIEQSSFTEIFGELHFEENSQSTS 60

Query: 61  ---SFVPHSFSSLSSLTESSNSPSAVDDIWKEPSSNGERE----PS-------------- 120
              SF   SFSS SS        +A  +I K  + + + +    PS              
Sbjct: 61  SPPSFPVSSFSSASSSFIDIIPRAAPSNINKNDNIDNQNDNKKIPSLDFFSATPKNHQYT 120

Query: 121 SFHRKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGVMDEKEWQEDEEERTLKKQINYP 180
            FH+  +SFS  N E+LQLCTEGLG+ESLDDVEDLK  ++E +WQ  E++ +  +     
Sbjct: 121 GFHKNGDSFSPRNYENLQLCTEGLGFESLDDVEDLKNDINE-DWQHQEDKVSFTRHSALE 180

Query: 181 NLKPGMINRTKLANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHAS 240
           N + G I R++ +    FPPPISC+GKSGKPWV FKSYR+ GRF+LK++  P+ EFLHA 
Sbjct: 181 N-QSGEIRRSRSSGRA-FPPPISCIGKSGKPWVSFKSYRHDGRFVLKQILTPSQEFLHAH 240

Query: 241 RENGRLKLHILVPNEQTREGEDEADD--NNKNCEN 246
           RENGRLKLH++ P ++  E EDE ++    +N EN
Sbjct: 241 RENGRLKLHLVQPRDEILEEEDEDEEVVEEENEEN 272

[Close]

BLAST of Csa1G166760 vs. TrEMBL
Match: A0A061GV87_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_041386 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.2e-57
Identity = 147/303 (48.51%), Postives = 173/303 (57.10%), Query Frame = 1


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMP-LKPTEPSSFTEIFGELHFKE------ 60
           MAACGSLQHIFENPLPEN TL E LSSWNQI P +KP EPSSFTEIFGELHFKE      
Sbjct: 1   MAACGSLQHIFENPLPENPTLLESLSSWNQIKPAIKPIEPSSFTEIFGELHFKENSKSSS 60

Query: 61  --SFVPHSFSSLSSLTESSNSPS---AVDDIWKEPSSNGERE------PSS--FHRKSNS 120
             SF    FSS S +  S  + +   + +D + E   N  R       PS+    + +N 
Sbjct: 61  ASSFPISPFSSTSIIDLSPQNSAFKLSKNDTFNENDENNNRSSPPEIFPSTPEITKYTNC 120

Query: 121 FSST-----NSESLQLCTEGLGYESLDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLK 180
              +     NSESLQLCTEGLG+ES DDVEDLK  M E  WQ  EE             K
Sbjct: 121 HKKSESFSWNSESLQLCTEGLGFESSDDVEDLKNEMKE-GWQSKEE-------------K 180

Query: 181 PGMINRTKLANMED--------------FPPPISCMGKSGKPWVGFKSYRYGGRFILKEV 240
              IN TK    E+              FPPPISC+GKSGKPWV FKSYR  GRF+LKEV
Sbjct: 181 ESSINTTKHTTTENLCGEFRRPRTRGGAFPPPISCIGKSGKPWVCFKSYRQDGRFVLKEV 240

Query: 241 RVPTHEFLHASRENGRLKLHILVPN---------EQTREGEDEADDNNKNCENTIGKCKV 256
           R+PT EFLHA RE+GRLKLH + P          E+  E EDE +D  +    +I + K 
Sbjct: 241 RIPTQEFLHACREDGRLKLHFVQPEDEILEEEGFEEEEEEEDELEDLEEGTHGSIDEDKE 289

[Close]

BLAST of Csa1G166760 vs. TAIR10
Match: AT5G22390.1 (AT5G22390.1 Protein of unknown function (DUF3049))

HSP 1 Score: 89.7 bits (221), Expect = 2.8e-18
Identity = 78/252 (30.95%), Postives = 112/252 (44.44%), Query Frame = 1


Query: 1   MAACGSLQHIFENPLPENS--TLFEHLSS---WNQIMPLKPTE-----PSSFTEIFGELH 60
           MAA GS   IF+NP  +NS  +  + LSS   WN    L  T      P  FTEIFGELH
Sbjct: 1   MAAYGSFHRIFDNPRQDNSPKSFLDTLSSSSPWNPSKGLHVTTHHDETPPPFTEIFGELH 60

Query: 61  FKESFVPHSFSSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQ 120
           F+ES   HS    +S  E+S+     + +  E     E E      K N     + + ++
Sbjct: 61  FRES--SHSSYEKTS-AENSSLQLCTEGLGSESYYGLEDE------KVNGDGDGDDDEIE 120

Query: 121 LCTEGLGYESLDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDF 180
           +  +              G  DE+EW+   +ER                        +++
Sbjct: 121 VKGKD------------NGSNDEEEWEPRRKER------------------------KEY 180

Query: 181 PPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTR 240
           PP ++ M         FK+YR  GR +L+EVR+P  EFL ASRE+GRL+L ++ P +   
Sbjct: 181 PPAMTRM--------SFKTYRKEGRLVLEEVRIPRREFLRASREDGRLRLKLVQPEDD-- 195

Query: 241 EGEDEADDNNKN 243
              DE ++N K+
Sbjct: 241 --HDEEEENEKD 195

[Close]

BLAST of Csa1G166760 vs. TAIR10
Match: AT5G19260.1 (AT5G19260.1 Protein of unknown function (DUF3049))

HSP 1 Score: 68.9 bits (167), Expect = 5.1e-12
Identity = 53/182 (29.12%), Postives = 84/182 (46.15%), Query Frame = 1


Query: 60  FSSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYE 119
           +SSL SL+  S+S +       + +++ E+E S + ++ +S  + + +SL LCTE LG E
Sbjct: 71  WSSLQSLSSGSSSST-------KTTTSSEKESSYYVQRPSSCRALSDQSLALCTENLGSE 130

Query: 120 SLDDVEDLK-----GVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPI 179
           S  DV D+       V  +   +   E RTLK             +R +  +  D PPP+
Sbjct: 131 SGSDVTDIDELFSLDVQTKNLGETTTETRTLK-------------SRKRSVSPSDLPPPL 190

Query: 180 SCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHE-FLHASRENGRLKLHILVPNEQTREGE 236
           + M   G   +  + +R  GR ++     P       A R NGRL+L IL  + +  E E
Sbjct: 191 TTM--RGFQCIQMRPHRENGRLVMTATNAPPRNGCFQADRSNGRLRLSILKDSNEFVENE 230

[Close]

BLAST of Csa1G166760 vs. TAIR10
Match: AT1G22110.1 (AT1G22110.1 structural constituent of ribosome)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-09
Identity = 55/196 (28.06%), Postives = 89/196 (45.41%), Query Frame = 1


Query: 64  SSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYESLDD 123
           SS ++SS+S ++  D  +  S N ++  +S    S+  S T+S S     + +G ES  D
Sbjct: 5   SSSSDSSSSMASSSD--QSLSINSDQ--TSPFVTSSMLSRTSSSSSSAVGDYIGTESCFD 64

Query: 124 VEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKSGK- 183
           +       DE           +K +  Y   +       + A   +FPPPI  + ++G  
Sbjct: 65  ILSA----DEGNDVVSVASEPVKSRFRYGGRRREE-REARAAAAREFPPPIPLLAQTGNL 124

Query: 184 ----PWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHIL--------VPNEQTR 243
               PWV  +     GR IL+E +V  HE+  A+R NGRL LH++        +P E + 
Sbjct: 125 LPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTLHLVPLDDDVFDLPQEPSH 184

Query: 244 -EGEDEADDNNKNCEN 246
            + +DE DD+  + E+
Sbjct: 185 YQSDDEEDDDECDDED 191

[Close]

BLAST of Csa1G166760 vs. NCBI nr
Match: gi|449443640|ref|XP_004139585.1| (PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus])

HSP 1 Score: 532.7 bits (1371), Expect = 3.5e-148
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60
           MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF
Sbjct: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60

Query: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120
           SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES
Sbjct: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120

Query: 121 LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS 180
           LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS
Sbjct: 121 LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS 180

Query: 181 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN 240
           GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN
Sbjct: 181 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN 240

Query: 241 KNCENTIGKCKVETRP 257
           KNCENTIGKCKVETRP
Sbjct: 241 KNCENTIGKCKVETRP 256

[Close]

BLAST of Csa1G166760 vs. NCBI nr
Match: gi|659071648|ref|XP_008461212.1| (PREDICTED: protein FANTASTIC FOUR 4-like [Cucumis melo])

HSP 1 Score: 505.4 bits (1300), Expect = 6.0e-140
Identity = 244/257 (94.94%), Postives = 249/257 (96.89%), Query Frame = 1


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60
           MAACGSLQHIFENPLPEN TL EHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF
Sbjct: 1   MAACGSLQHIFENPLPENPTLLEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60

Query: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120
           SSLSSLTESSNS SA DD+WKEP SNGEREPS+FHRKSNSFSSTNSESLQLCTEGLGYES
Sbjct: 61  SSLSSLTESSNSTSAADDLWKEPLSNGEREPSNFHRKSNSFSSTNSESLQLCTEGLGYES 120

Query: 121 LDDVEDLKGVMDEKEW-QEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGK 180
           LDDVEDLKGVMDEKEW +EDEEERTLKKQI YPNLKPGMINRTK ANMEDFPPPISCMGK
Sbjct: 121 LDDVEDLKGVMDEKEWPKEDEEERTLKKQIQYPNLKPGMINRTKSANMEDFPPPISCMGK 180

Query: 181 SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN 240
           SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN
Sbjct: 181 SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN 240

Query: 241 NKNCENTIGKCKVETRP 257
           ++NCENTIGKCKVETRP
Sbjct: 241 HENCENTIGKCKVETRP 257

[Close]

BLAST of Csa1G166760 vs. NCBI nr
Match: gi|255565665|ref|XP_002523822.1| (PREDICTED: protein FAF-like, chloroplastic [Ricinus communis])

HSP 1 Score: 236.9 bits (603), Expect = 4.0e-59
Identity = 138/287 (48.08%), Postives = 173/287 (60.28%), Query Frame = 1


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60
           MAACGSLQHIFE PLPE  TL E LSSWN I  +KP E SSFTEIFGELHFKE+    S 
Sbjct: 1   MAACGSLQHIFEKPLPETPTLLESLSSWNPIKTIKPIEQSSFTEIFGELHFKENSESSSS 60

Query: 61  S---SLSSLTESSNSPSAVDDIWKEPSSNGEREPS------------------------- 120
           S    + S + SS S S +  I +  +SN  R  S                         
Sbjct: 61  SPSFPIPSFSSSSPSSSFIGLIPEAETSNLNRNDSFDSGCHTKKSTSLDSLLSTPKNYQY 120

Query: 121 -SFHRKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGVMDEKEWQEDEEERTLKKQINY 180
              HR  +SFS  N ESLQLCTEGLG+ES DDVEDLK  M+E    ++E+    +  +  
Sbjct: 121 AGCHRNGDSFSPRNYESLQLCTEGLGFESFDDVEDLKNDMNENRQHQEEKAGITRHSV-- 180

Query: 181 PNLKPGMINRTKLANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHA 240
              + G I R++L  +  FPPPISC+GKSGKPWV FKSYR+ GRF+LK+VR+P+ EFLHA
Sbjct: 181 LESQAGEIRRSRL-RIGAFPPPISCIGKSGKPWVSFKSYRHDGRFVLKQVRIPSQEFLHA 240

Query: 241 SRENGRLKLHILVPNE---QTREGEDE--ADDNNKNCENTIGKCKVE 254
            RE+GRLKLH + PN+   +  EGE+E   +D+ +     IG  +V+
Sbjct: 241 HREDGRLKLHFVQPNDGIHEEEEGEEENFTEDDEQEENEEIGNKEVQ 284

[Close]

BLAST of Csa1G166760 vs. NCBI nr
Match: gi|731394549|ref|XP_010651876.1| (PREDICTED: suppressor protein SRP40 [Vitis vinifera])

HSP 1 Score: 236.5 bits (602), Expect = 5.2e-59
Identity = 140/289 (48.44%), Postives = 177/289 (61.25%), Query Frame = 1


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFV---- 60
           MAACGSLQHIFE PLPEN TL + LSSWNQI  +KP E  SFTEIFGELHFKE+      
Sbjct: 1   MAACGSLQHIFEKPLPENPTLMDTLSSWNQIKSMKPPEQPSFTEIFGELHFKENSELLSS 60

Query: 61  --------PHSFSSLSSLTESSNSPSAVD----------DIWKEPS--SNGEREPS-SFH 120
                   P + SS SSL+ +S++ S +D          + W E    + G   P  S H
Sbjct: 61  SSYLSSPHPPTSSSSSSLSSTSSTSSLIDFNPQLRIEKNENWGEKGEENKGPLNPYVSRH 120

Query: 121 RKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKG-VMDEKEWQEDEEERTLKKQINYPNL 180
           R S+SFSS  SESLQLCTEGLG+ES DDVED+   + D+ E QE+   R   ++  Y   
Sbjct: 121 RNSDSFSSMKSESLQLCTEGLGFESCDDVEDVHNEIKDDWENQEERVTRHSPRENAYTEF 180

Query: 181 KPGMINRTKLANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRE 240
           +    +RT+      FPPPISC+GKSGKPWV FKSYR+ GRF+LKE+R+P  E LHA RE
Sbjct: 181 RR---SRTQGGA---FPPPISCIGKSGKPWVSFKSYRHDGRFVLKEIRIPNQELLHACRE 240

Query: 241 NGRLKLHILVPNE----------QTREGEDEADDNNKNCENTIGKCKVE 254
           +GRLKLH + P+E          +  + EDE DDN++   +  G+ + E
Sbjct: 241 DGRLKLHFVQPDEILEEDEEQDVEDTDNEDEYDDNDEEDNDENGEHEAE 283

[Close]

BLAST of Csa1G166760 vs. NCBI nr
Match: gi|802621744|ref|XP_012076118.1| (PREDICTED: protein FANTASTIC FOUR 1 [Jatropha curcas])

HSP 1 Score: 234.2 bits (596), Expect = 2.6e-58
Identity = 136/275 (49.45%), Postives = 174/275 (63.27%), Query Frame = 1


Query: 1   MAACGSLQHIFENPLPEN-STLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKE------ 60
           MAACGSLQHIFE PL +  +TL E LSSWNQI P+KP E SSFTEIFGELHF+E      
Sbjct: 1   MAACGSLQHIFEKPLSQTPATLLESLSSWNQIKPVKPIEQSSFTEIFGELHFEENSQSTS 60

Query: 61  ---SFVPHSFSSLSSLTESSNSPSAVDDIWKEPSSNGERE----PS-------------- 120
              SF   SFSS SS        +A  +I K  + + + +    PS              
Sbjct: 61  SPPSFPVSSFSSASSSFIDIIPRAAPSNINKNDNIDNQNDNKKIPSLDFFSATPKNHQYT 120

Query: 121 SFHRKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGVMDEKEWQEDEEERTLKKQINYP 180
            FH+  +SFS  N E+LQLCTEGLG+ESLDDVEDLK  ++E +WQ  E++ +  +     
Sbjct: 121 GFHKNGDSFSPRNYENLQLCTEGLGFESLDDVEDLKNDINE-DWQHQEDKVSFTRHSALE 180

Query: 181 NLKPGMINRTKLANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHAS 240
           N + G I R++ +    FPPPISC+GKSGKPWV FKSYR+ GRF+LK++  P+ EFLHA 
Sbjct: 181 N-QSGEIRRSRSSGRA-FPPPISCIGKSGKPWVSFKSYRHDGRFVLKQILTPSQEFLHAH 240

Query: 241 RENGRLKLHILVPNEQTREGEDEADD--NNKNCEN 246
           RENGRLKLH++ P ++  E EDE ++    +N EN
Sbjct: 241 RENGRLKLHLVQPRDEILEEEDEDEEVVEEENEEN 272

The following BLAST results are available for this feature:

BLAST of Csa1G166760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAF3_ARATH	9.0e-11	29.12	Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana GN=FAF3 PE=2 SV=1	[more]

BLAST of Csa1G166760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVU3_CUCSA	2.4e-148	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166760 PE=4 SV=1	[more]
B9SCV3_RICCO	2.8e-59	48.08	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1281760 PE=4 SV=1	[more]
F6HHF4_VITVI	3.6e-59	48.44	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00570 PE=4 SV=...	[more]
A0A067KDV5_JATCU	1.8e-58	49.45	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12692 PE=4 SV=1	[more]
A0A061GV87_THECC	1.2e-57	48.51	Uncharacterized protein OS=Theobroma cacao GN=TCM_041386 PE=4 SV=1	[more]

BLAST of Csa1G166760 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22390.1	2.8e-18	30.95	Protein of unknown function (DUF3049)	[more]
AT5G19260.1	5.1e-12	29.12	Protein of unknown function (DUF3049)	[more]
AT1G22110.1	1.8e-09	28.06	structural constituent of ribosome	[more]

BLAST of Csa1G166760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443640\|ref\|XP_004139585.1\|	3.5e-148	100.00	PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus]	[more]
gi\|659071648\|ref\|XP_008461212.1\|	6.0e-140	94.94	PREDICTED: protein FANTASTIC FOUR 4-like [Cucumis melo]	[more]
gi\|255565665\|ref\|XP_002523822.1\|	4.0e-59	48.08	PREDICTED: protein FAF-like, chloroplastic [Ricinus communis]	[more]
gi\|731394549\|ref\|XP_010651876.1\|	5.2e-59	48.44	PREDICTED: suppressor protein SRP40 [Vitis vinifera]	[more]
gi\|802621744\|ref\|XP_012076118.1\|	2.6e-58	49.45	PREDICTED: protein FANTASTIC FOUR 1 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021410	FAF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003676	nucleic acid binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU117041	cucumber EST collection version 3.0	transcribed_cluster
CU177362	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G166760.1	Csa1G166760.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU177362	CU177362	transcribed_cluster
CU117041	CU117041	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 170..221 score: 2.9
None	No IPR available	PANTHER	PTHR33155	FAMILY NOT NAMED	coord: 1..240 score: 8.9
None	No IPR available	PANTHER	PTHR33155:SF9	SUBFAMILY NOT NAMED	coord: 1..240 score: 8.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G166760	Cla008637	Watermelon (97103) v1	cuwmB065
Csa1G166760	MELO3C004685	Melon (DHL92) v3.5.1	cumeB015
Csa1G166760	ClCG02G022240	Watermelon (Charleston Gray)	cuwcgB028
Csa1G166760	ClCG01G012170	Watermelon (Charleston Gray)	cuwcgB016
Csa1G166760	Lsi03G001260	Bottle gourd (USVL1VR-Ls)	culsiB046
Csa1G166760	Lsi10G011540	Bottle gourd (USVL1VR-Ls)	culsiB005
Csa1G166760	MELO3C004685.2	Melon (DHL92) v3.6.1	cumedB010
Csa1G166760	Cla97C01G011530	Watermelon (97103) v2	cuwmbB007
Csa1G166760	Cla97C02G048340	Watermelon (97103) v2	cuwmbB026
Csa1G166760	Bhi08G000032	Wax gourd	cuwgoB049
Csa1G166760	CSPI01G14890	Wild cucumber (PI 183967)	cpicuB000
Csa1G166760	Cucsa.319780	Cucumber (Gy14) v1	cgycuB457
Csa1G166760	CmaCh02G013210	Cucurbita maxima (Rimu)	cmacuB579
Csa1G166760	CmaCh18G006510	Cucurbita maxima (Rimu)	cmacuB399
Csa1G166760	CmoCh02G013610	Cucurbita moschata (Rifu)	cmocuB569
Csa1G166760	CsGy1G014700	Cucumber (Gy14) v2	cgybcuB001
Csa1G166760	Carg02640	Silver-seed gourd	carcuB0931

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G166760	Melon (DHL92) v3.6.1	cumedB061
Csa1G166760	Melon (DHL92) v3.6.1	cumedB078
Csa1G166760	Silver-seed gourd	carcuB0000
Csa1G166760	Watermelon (97103) v2	cuwmbB009
Csa1G166760	Watermelon (97103) v2	cuwmbB018
Csa1G166760	Cucumber (Chinese Long) v2	cucuB016
Csa1G166760	Cucumber (Gy14) v1	cgycuB342
Csa1G166760	Cucurbita moschata (Rifu)	cmocuB383
Csa1G166760	Melon (DHL92) v3.5.1	cumeB068
Csa1G166760	Watermelon (Charleston Gray)	cuwcgB006
Csa1G166760	Watermelon (97103) v1	cuwmB007
Csa1G166760	Watermelon (97103) v1	cuwmB042
Csa1G166760	Watermelon (97103) v1	cuwmB057
Csa1G166760	Cucurbita pepo (Zucchini)	cpecuB020
Csa1G166760	Cucurbita pepo (Zucchini)	cpecuB848
Csa1G166760	Bottle gourd (USVL1VR-Ls)	culsiB021