CU117041 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU117041
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 10363858 .. 10364093 (-)
Sequence length238
The following sequences are available for this feature:

transcribed_cluster sequence

GTGAAAAAGAAGGTTCAAACGACAATATTCATCATTTTATAGAAGAGAAGTTGACAAGTCTAATCTTGAAATATTCTACCTAAGAAAGTGATTGCCTCTTATTTCATCATGGCCTAGTTTCAACCTTACATTTCCCAATAGTATTTTCACAGTTCTTGTTGTTGTCGTCGGCCTCATCCTCACCTTCTCCGGGTCTGCTCATTTGGTACAAGAATATGCAGTTTCAAACGTCCATTTT
Library categoryESTs
fruit (8DPP) library2
BLAST of CU117041 vs. TrEMBL
Match: A0A0A0LVU3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166760 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.4e-07
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = -1

Query: 110 EGEDEADDNNKNCENTIGKCKVETRP 169
           EGEDEADDNNKNCENTIGKCKVETRP
Sbjct: 231 EGEDEADDNNKNCENTIGKCKVETRP 256

Query: 170 188
           
Sbjct: 291 256

BLAST of CU117041 vs. NCBI nr
Match: gi|449443640|ref|XP_004139585.1| (PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus])

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-06
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = -1

Query: 110 EGEDEADDNNKNCENTIGKCKVETRP 169
           EGEDEADDNNKNCENTIGKCKVETRP
Sbjct: 231 EGEDEADDNNKNCENTIGKCKVETRP 256

Query: 170 188
           
Sbjct: 291 256

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LVU3_CUCSA8.4e-07100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166760 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449443640|ref|XP_004139585.1|1.6e-06100.00PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G166760Csa1G166760gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02NAHRIFKNP3UI02NAHRIEST
FKNP3UI02OG1TWFKNP3UI02OG1TWEST