CmaCh18G000910 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh18G000910
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionZinc finger homeodomain protein
LocationCma_Chr18 : 423553 .. 424080 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGGAGAGAATTCTCATTATCACTACAGAGAATGCCTACGGAACCATGCAGCGAATCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACTCTCGACGACACCTCTTCTCCGGCCAACCAACTTTACTGCGCCGCCTGCAACTGCCACCGCAACTTCCACCGCAAAGTCACGTATATCGGCGGCAGCGGACGTTTTTCCTCCGCCGCCCCCACCGCCGACAACCTCATGGACTACGACCGTCACGCCATCGTCGAGTACGCCGCCACCGACACCGGCGGCAGCAAAAAACGGTTCCGAACAAAGTTCACGACGGATCAGAAGGAAAAAATGCTGGCATTTGCAGAGAGATTGGGTTGGAAGTTGCAGAGGAAAGATCTGGACGAGGAGATCGAGAGGTTCTGTCGGAGCGTGGGGATCACTCGCCAAGTTTTCAAGGTTTGGATGCACAATCACAAGAATTCCTTCTCTTCAAATTCTGCTTCCACTGGAAATGTCTCTTCTGTAACAAACCAAGATTAA

mRNA sequence

ATGGACGGAGAGAATTCTCATTATCACTACAGAGAATGCCTACGGAACCATGCAGCGAATCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACTCTCGACGACACCTCTTCTCCGGCCAACCAACTTTACTGCGCCGCCTGCAACTGCCACCGCAACTTCCACCGCAAAGTCACGTATATCGGCGGCAGCGGACGTTTTTCCTCCGCCGCCCCCACCGCCGACAACCTCATGGACTACGACCGTCACGCCATCGTCGAGTACGCCGCCACCGACACCGGCGGCAGCAAAAAACGGTTCCGAACAAAGTTCACGACGGATCAGAAGGAAAAAATGCTGGCATTTGCAGAGAGATTGGGTTGGAAGTTGCAGAGGAAAGATCTGGACGAGGAGATCGAGAGGTTCTGTCGGAGCGTGGGGATCACTCGCCAAGTTTTCAAGGTTTGGATGCACAATCACAAGAATTCCTTCTCTTCAAATTCTGCTTCCACTGGAAATGTCTCTTCTGTAACAAACCAAGATTAA

Coding sequence (CDS)

ATGGACGGAGAGAATTCTCATTATCACTACAGAGAATGCCTACGGAACCATGCAGCGAATCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACTCTCGACGACACCTCTTCTCCGGCCAACCAACTTTACTGCGCCGCCTGCAACTGCCACCGCAACTTCCACCGCAAAGTCACGTATATCGGCGGCAGCGGACGTTTTTCCTCCGCCGCCCCCACCGCCGACAACCTCATGGACTACGACCGTCACGCCATCGTCGAGTACGCCGCCACCGACACCGGCGGCAGCAAAAAACGGTTCCGAACAAAGTTCACGACGGATCAGAAGGAAAAAATGCTGGCATTTGCAGAGAGATTGGGTTGGAAGTTGCAGAGGAAAGATCTGGACGAGGAGATCGAGAGGTTCTGTCGGAGCGTGGGGATCACTCGCCAAGTTTTCAAGGTTTGGATGCACAATCACAAGAATTCCTTCTCTTCAAATTCTGCTTCCACTGGAAATGTCTCTTCTGTAACAAACCAAGATTAA

Protein sequence

MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVTYIGGSGRFSSAAPTADNLMDYDRHAIVEYAATDTGGSKKRFRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVTNQD
Homology
[Close]
BLAST of CmaCh18G000910 vs. Swiss-Prot
Match: ZHD2_ARATH (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.8e-34
Identity = 81/177 (45.76%), Postives = 98/177 (55.37%), Query Frame = 1 

Query: 3   GENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVT-Y 62
           G  +   YRECL+NHA N+G +A DGC EF         + L CAAC CHRNFHRK T  
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

Query: 63  IGGSGR---------------------FSSAAPTADNLMDYDRHAIVEYAATDTGGSKKR 122
           IGG                         S AAP        D         + +GG+ KR
Sbjct: 102 IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSN--PSSSGGTTKR 161

Query: 123 FRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNS 158
           FRTKFT +QKEKMLAFAERLGW++Q+ D D  +E+FC   G+ RQV K+WMHN+KNS
Sbjct: 162 FRTKFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]
BLAST of CmaCh18G000910 vs. Swiss-Prot
Match: ZHD11_ORYSJ (Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. japonica GN=ZHD11 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.7e-33
Identity = 82/183 (44.81%), Postives = 101/183 (55.19%), Query Frame = 1 

Query: 10  YRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRK-------VTYI 69
           YREC+RNHAA LG+YA DGC E+T DD   PA  L CAAC CHRNFHRK           
Sbjct: 12  YRECMRNHAAKLGTYANDGCCEYTPDD-GHPAG-LLCAACGCHRNFHRKDFLDGRATAAA 71

Query: 70  GGSGRFSSA------APTADNLMDYDRHAIVEYAATDTGG--------SKKRFRTKFTTD 129
           GG+G           AP       Y   A +  A    GG         ++R RTKFT +
Sbjct: 72  GGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRTKFTEE 131

Query: 130 QKEKMLAFAERLGWKLQRKDL-----DEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSA 167
           QK +ML FAERLGW++ +++      D+E+ RFCR +G+ RQVFKVWMHNHK        
Sbjct: 132 QKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHKAGGGGGGG 191

[Close]
BLAST of CmaCh18G000910 vs. Swiss-Prot
Match: ZHD11_ORYSI (Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. indica GN=ZHD11 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.7e-33
Identity = 82/183 (44.81%), Postives = 101/183 (55.19%), Query Frame = 1 

Query: 10  YRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRK-------VTYI 69
           YREC+RNHAA LG+YA DGC E+T DD   PA  L CAAC CHRNFHRK           
Sbjct: 12  YRECMRNHAAKLGTYANDGCCEYTPDD-GHPAG-LLCAACGCHRNFHRKDFLDGRATAAA 71

Query: 70  GGSGRFSSA------APTADNLMDYDRHAIVEYAATDTGG--------SKKRFRTKFTTD 129
           GG+G           AP       Y   A +  A    GG         ++R RTKFT +
Sbjct: 72  GGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRTKFTEE 131

Query: 130 QKEKMLAFAERLGWKLQRKDL-----DEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSA 167
           QK +ML FAERLGW++ +++      D+E+ RFCR +G+ RQVFKVWMHNHK        
Sbjct: 132 QKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHKAGGGGGGG 191

[Close]
BLAST of CmaCh18G000910 vs. Swiss-Prot
Match: ZHD1_ARATH (Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.9e-31
Identity = 76/189 (40.21%), Postives = 100/189 (52.91%), Query Frame = 1 

Query: 3   GENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRK-VTY 62
           G  S + +RECL+N A N+G +A DGCGEF         + L CAAC CHRNFHRK + Y
Sbjct: 68  GGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPY 127

Query: 63  IGGSGRFSSAAPTADNLMDYDRHAIVEY-----------------------------AAT 122
              +       P       Y   A V Y                             +A 
Sbjct: 128 FHHAPPQHQPPPPPPGF--YRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSSAE 187

Query: 123 DTGGSKKRFRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMH 162
             GG +KR RTKFT +QKE+MLA AER+GW++QR+D DE I+RFC+  G+ RQV KVW+H
Sbjct: 188 AGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLH 247

[Close]
BLAST of CmaCh18G000910 vs. Swiss-Prot
Match: ZHD4_ARATH (Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana GN=ZHD4 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.9e-30
Identity = 75/193 (38.86%), Postives = 101/193 (52.33%), Query Frame = 1 

Query: 10  YRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRK----------- 69
           Y+ECL+NHAA +G  ATDGCGEF           L C+ACNCHRNFHRK           
Sbjct: 90  YKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRKEVEGELAATAM 149

Query: 70  ---------------------------VTYIGGSG-RFSSAAPTADNLMDYDRHAIVEYA 129
                                      +  IG S  R+      +++ M+ D       +
Sbjct: 150 SPYHQHPPHRKLMLNHQKIRSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTASRS 209

Query: 130 ATDTG-GSKKRFRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKV 163
             +     KKRFRTKFT +QKEKML+FAE++GWK+QR++ D  ++RFC  +G+ R+V KV
Sbjct: 210 LPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQE-DCVVQRFCEEIGVKRRVLKV 269

[Close]
BLAST of CmaCh18G000910 vs. TrEMBL
Match: A0A0A0LQK4_CUCSA (Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus GN=Csa_1G043040 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.1e-82
Identity = 150/176 (85.23%), Postives = 161/176 (91.48%), Query Frame = 1 

Query: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVT 60
           MDGENS+YHYRECLRNHAA+LGSYATDGCGEFTLDD+SSPAN L+CAAC CHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIGGSGRFSSAAPTADNLMDYDRHAIVEYAATDT----GGSKKRFRTKFTTDQKEKMLAF 120
           YI G GR S+A  T D+LMDYDRHA+VEYAA DT    GGSKKRFRTKFT DQKEKMLAF
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAF 120

Query: 121 AERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVT 173
           AE+LGWKLQRKDLD+EIERFCRSVG+TRQVFKVWMHNHKNSFSSNSASTGN SS+T
Sbjct: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLT 176

[Close]
BLAST of CmaCh18G000910 vs. TrEMBL
Match: A0A059AWK7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00572 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.4e-56
Identity = 124/192 (64.58%), Postives = 142/192 (73.96%), Query Frame = 1 

Query: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVT 60
           M+G+N +  YRECLRNHAA+LGSYATDGCGEFTLDDTS     L CAAC CHRNFHRK+T
Sbjct: 1   MEGDNRNEAYRECLRNHAASLGSYATDGCGEFTLDDTSP--GSLQCAACGCHRNFHRKMT 60

Query: 61  YI------GG-----SGRFSSAAPTADNLMDYDRHAIVEYAATDT----GGS--KKRFRT 120
           Y+      GG     SG   +A      L++Y R   +  AA       GGS  KKRFRT
Sbjct: 61  YVSAHAGSGGLMVCRSGGRDNAELCGGELVEYGRGRQLNMAADSPESGGGGSGVKKRFRT 120

Query: 121 KFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSN-S 175
           KFTTDQKEKMLAFAE+LGWK+QRKD ++EIERFCRSVG++RQVFKVWMHNHKNS SS+ S
Sbjct: 121 KFTTDQKEKMLAFAEKLGWKMQRKDEEDEIERFCRSVGVSRQVFKVWMHNHKNSSSSSTS 180

[Close]
BLAST of CmaCh18G000910 vs. TrEMBL
Match: U5FLX4_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0015s05220g PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.2e-53
Identity = 113/188 (60.11%), Postives = 134/188 (71.28%), Query Frame = 1 

Query: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVT 60
           M+ +N++  Y+ECLRNHAA+LGSYATDGCGEFTLDDTSSP + L CAAC CHRNFHRKVT
Sbjct: 1   MESDNTNDLYKECLRNHAASLGSYATDGCGEFTLDDTSSPYS-LQCAACGCHRNFHRKVT 60

Query: 61  YIGGSGRFS------SAAPTADNLMDY-------DRHAIVEYAATDTGGSKKRFRTKFTT 120
           Y   S R        S+      ++DY       D    V    +     KKR+RTKFT 
Sbjct: 61  YSNSSNRRDHIMHPPSSETVVMEMIDYAEGNNERDFRPPVMVVESGERSGKKRYRTKFTP 120

Query: 121 DQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGN 176
           +QKEKML FAE+LGWKLQRKD ++E+E FCR +GI+RQVFKVWMHNHKNS SS SASTGN
Sbjct: 121 EQKEKMLGFAEKLGWKLQRKDEEDEVESFCRGIGISRQVFKVWMHNHKNSSSSTSASTGN 180

[Close]
BLAST of CmaCh18G000910 vs. TrEMBL
Match: M5WVJ3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011508mg PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.5e-53
Identity = 120/202 (59.41%), Postives = 136/202 (67.33%), Query Frame = 1 

Query: 4   ENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVTYI- 63
           +N++  YRECLRNHAA+LGSYATDGCGEFTLDD S     L CAAC CHRNFHR+VTY  
Sbjct: 8   QNTNEVYRECLRNHAASLGSYATDGCGEFTLDDASPGG--LQCAACGCHRNFHRRVTYAA 67

Query: 64  ------GGSGRFS-----------------------SAAPTADNLMDYDRHAIVEYAATD 123
                 GGSGR S                       +   T D LMDY+        + D
Sbjct: 68  TSSQAAGGSGRSSGHHHHHHNRVIMSSSSRGRDPSDNTIATQDQLMDYNAGGGGSPDSGD 127

Query: 124 TGGSKKRFRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHN 175
               KKRFRTKFT +QKEKMLAFAE+LGWKLQRKDL++EIERFCRS+G++RQVFKVWMHN
Sbjct: 128 RMSGKKRFRTKFTAEQKEKMLAFAEKLGWKLQRKDLEDEIERFCRSIGVSRQVFKVWMHN 187

[Close]
BLAST of CmaCh18G000910 vs. TrEMBL
Match: A0A072UBE0_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_6g073013 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.2e-52
Identity = 109/173 (63.01%), Postives = 132/173 (76.30%), Query Frame = 1 

Query: 5   NSHYHYRECLRNHAANLGSYATDGCGEFTLDDTS-SPANQLYCAACNCHRNFHRKVTYIG 64
           + +Y YRECLRNHAA+LGSYATDGCGEFT+DD+S S  N L CAAC CHRNFHRK+T I 
Sbjct: 14  SQNYIYRECLRNHAASLGSYATDGCGEFTIDDSSPSAVNSLQCAACGCHRNFHRKITAI- 73

Query: 65  GSGRFSSAAPTADNLMDYDRHAIVEYAATDTGGSKKRFRTKFTTDQKEKMLAFAERLGWK 124
            +   ++AA  +D +M+Y          + + G +KR+RTKFT DQKEKM+ FAE+LGWK
Sbjct: 74  -TRESAAAAAMSDQMMEYSGGG-----GSGSDGRRKRYRTKFTPDQKEKMMGFAEKLGWK 133

Query: 125 LQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSA--STGNVSSVTNQ 175
           LQRK+LDEEIERFC SVG++RQVFKVWMHNHKNS  SNS+  STGN +S   Q
Sbjct: 134 LQRKELDEEIERFCESVGVSRQVFKVWMHNHKNSCFSNSSDPSTGNANSSLTQ 179

[Close]
BLAST of CmaCh18G000910 vs. TAIR10
Match: AT4G24660.1 (AT4G24660.1 homeobox protein 22)

HSP 1 Score: 147.1 bits (370), Expect = 9.9e-36
Identity = 81/177 (45.76%), Postives = 98/177 (55.37%), Query Frame = 1 

Query: 3   GENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVT-Y 62
           G  +   YRECL+NHA N+G +A DGC EF         + L CAAC CHRNFHRK T  
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

Query: 63  IGGSGR---------------------FSSAAPTADNLMDYDRHAIVEYAATDTGGSKKR 122
           IGG                         S AAP        D         + +GG+ KR
Sbjct: 102 IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSN--PSSSGGTTKR 161

Query: 123 FRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNS 158
           FRTKFT +QKEKMLAFAERLGW++Q+ D D  +E+FC   G+ RQV K+WMHN+KNS
Sbjct: 162 FRTKFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]
BLAST of CmaCh18G000910 vs. TAIR10
Match: AT5G65410.1 (AT5G65410.1 homeobox protein 25)

HSP 1 Score: 135.2 bits (339), Expect = 3.9e-32
Identity = 76/189 (40.21%), Postives = 100/189 (52.91%), Query Frame = 1 

Query: 3   GENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRK-VTY 62
           G  S + +RECL+N A N+G +A DGCGEF         + L CAAC CHRNFHRK + Y
Sbjct: 68  GGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPY 127

Query: 63  IGGSGRFSSAAPTADNLMDYDRHAIVEY-----------------------------AAT 122
              +       P       Y   A V Y                             +A 
Sbjct: 128 FHHAPPQHQPPPPPPGF--YRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSSAE 187

Query: 123 DTGGSKKRFRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMH 162
             GG +KR RTKFT +QKE+MLA AER+GW++QR+D DE I+RFC+  G+ RQV KVW+H
Sbjct: 188 AGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLH 247

[Close]
BLAST of CmaCh18G000910 vs. TAIR10
Match: AT1G14440.1 (AT1G14440.1 homeobox protein 31)

HSP 1 Score: 132.1 bits (331), Expect = 3.3e-31
Identity = 75/193 (38.86%), Postives = 101/193 (52.33%), Query Frame = 1 

Query: 10  YRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRK----------- 69
           Y+ECL+NHAA +G  ATDGCGEF           L C+ACNCHRNFHRK           
Sbjct: 90  YKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRKEVEGELAATAM 149

Query: 70  ---------------------------VTYIGGSG-RFSSAAPTADNLMDYDRHAIVEYA 129
                                      +  IG S  R+      +++ M+ D       +
Sbjct: 150 SPYHQHPPHRKLMLNHQKIRSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTASRS 209

Query: 130 ATDTG-GSKKRFRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKV 163
             +     KKRFRTKFT +QKEKML+FAE++GWK+QR++ D  ++RFC  +G+ R+V KV
Sbjct: 210 LPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQE-DCVVQRFCEEIGVKRRVLKV 269

[Close]
BLAST of CmaCh18G000910 vs. TAIR10
Match: AT3G50890.1 (AT3G50890.1 homeobox protein 28)

HSP 1 Score: 131.0 bits (328), Expect = 7.4e-31
Identity = 74/188 (39.36%), Postives = 99/188 (52.66%), Query Frame = 1 

Query: 10  YRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVTYIGGSGR-- 69
           YREC +NHAA+ G +  DGC EF           L CAACNCHR+FHRK  Y   + +  
Sbjct: 60  YRECQKNHAASTGGHVVDGCCEFMAGGEEGTLGALKCAACNCHRSFHRKEVYGHRNSKQD 119

Query: 70  ---------FSSAAPTADNLM-------------DYDRHAIVEYAATDTGGS-------- 129
                    +SS +     +M               D   I+ +   +  G         
Sbjct: 120 HQLMITPAFYSSNSSYKPRVMHPTGEIGRRTSSSSEDMKKILSHRNQNVDGKSLMMMMMR 179

Query: 130 -KKRFRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKN 165
            KKR RTK   +QKEKM  FAERLGW++Q+KD +EEI++FCR V + RQVFKVWMHN+K 
Sbjct: 180 KKKRVRTKINEEQKEKMKEFAERLGWRMQKKD-EEEIDKFCRMVNLRRQVFKVWMHNNKQ 239

[Close]
BLAST of CmaCh18G000910 vs. TAIR10
Match: AT2G18350.1 (AT2G18350.1 homeobox protein 24)

HSP 1 Score: 128.6 bits (322), Expect = 3.7e-30
Identity = 67/176 (38.07%), Postives = 92/176 (52.27%), Query Frame = 1 

Query: 10  YRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRK----------- 69
           YREC +NHAA+ G +  DGCGEF           L CAAC+CHR+FHRK           
Sbjct: 82  YRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFN 141

Query: 70  -----------------VTYIGGSGRFSSAAPTADNLMDYDRHAIVEYAATDTGGSKKRF 129
                            +   GG G  ++ + T D    +   +            KKRF
Sbjct: 142 SFGHSQRPLGSRHVSPIMMSFGGGGGCAAESSTEDLNKFHQSFSGYGVDQFHHYQPKKRF 201

Query: 130 RTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNS 158
           RTKF  +QKEKM+ FAE++GW++ + + D+E+ RFCR + + RQVFKVWMHN+K +
Sbjct: 202 RTKFNEEQKEKMMEFAEKIGWRMTKLE-DDEVNRFCREIKVKRQVFKVWMHNNKQA 256

[Close]
BLAST of CmaCh18G000910 vs. NCBI nr
Match: gi|449439493|ref|XP_004137520.1| (PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis sativus])

HSP 1 Score: 313.2 bits (801), Expect = 3.0e-82
Identity = 150/176 (85.23%), Postives = 161/176 (91.48%), Query Frame = 1 

Query: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVT 60
           MDGENS+YHYRECLRNHAA+LGSYATDGCGEFTLDD+SSPAN L+CAAC CHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIGGSGRFSSAAPTADNLMDYDRHAIVEYAATDT----GGSKKRFRTKFTTDQKEKMLAF 120
           YI G GR S+A  T D+LMDYDRHA+VEYAA DT    GGSKKRFRTKFT DQKEKMLAF
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAF 120

Query: 121 AERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVT 173
           AE+LGWKLQRKDLD+EIERFCRSVG+TRQVFKVWMHNHKNSFSSNSASTGN SS+T
Sbjct: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLT 176

[Close]
BLAST of CmaCh18G000910 vs. NCBI nr
Match: gi|659066933|ref|XP_008467173.1| (PREDICTED: zinc-finger homeodomain protein 10-like [Cucumis melo])

HSP 1 Score: 310.5 bits (794), Expect = 1.9e-81
Identity = 151/178 (84.83%), Postives = 162/178 (91.01%), Query Frame = 1 

Query: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVT 60
           MDGENS+YHYRECLRNHAA+LGSYATDGCGEFTLDD+SSPAN L+CAAC CHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YI-GGSGRFSSAAPTADNLMDYDRHAIVEYAATDT-----GGSKKRFRTKFTTDQKEKML 120
           YI GG GR S+A  T D+LMDYDRHA+VEYAA DT     GGSKKRFRTKFT DQKEKML
Sbjct: 61  YIAGGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGGSKKRFRTKFTVDQKEKML 120

Query: 121 AFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVT 173
           AFAE+LGWKLQRKDLD+EIERFCRSVG+TRQVFKVWMHNHKNSFSSNSASTGN SS+T
Sbjct: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLT 178

[Close]
BLAST of CmaCh18G000910 vs. NCBI nr
Match: gi|702433639|ref|XP_010069461.1| (PREDICTED: zinc-finger homeodomain protein 11-like [Eucalyptus grandis])

HSP 1 Score: 224.9 bits (572), Expect = 1.1e-55
Identity = 124/192 (64.58%), Postives = 142/192 (73.96%), Query Frame = 1 

Query: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVT 60
           M+G+N +  YRECLRNHAA+LGSYATDGCGEFTLDDTS     L CAAC CHRNFHRK+T
Sbjct: 1   MEGDNRNEAYRECLRNHAASLGSYATDGCGEFTLDDTSP--GSLQCAACGCHRNFHRKMT 60

Query: 61  YI------GG-----SGRFSSAAPTADNLMDYDRHAIVEYAATDT----GGS--KKRFRT 120
           Y+      GG     SG   +A      L++Y R   +  AA       GGS  KKRFRT
Sbjct: 61  YVSAHAGSGGLMVCRSGGRDNAELCGGELVEYGRGRQLNMAADSPESGGGGSGVKKRFRT 120

Query: 121 KFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSN-S 175
           KFTTDQKEKMLAFAE+LGWK+QRKD ++EIERFCRSVG++RQVFKVWMHNHKNS SS+ S
Sbjct: 121 KFTTDQKEKMLAFAEKLGWKMQRKDEEDEIERFCRSVGVSRQVFKVWMHNHKNSSSSSTS 180

[Close]
BLAST of CmaCh18G000910 vs. NCBI nr
Match: gi|743878022|ref|XP_011035531.1| (PREDICTED: zinc-finger homeodomain protein 4-like [Populus euphratica])

HSP 1 Score: 219.2 bits (557), Expect = 5.8e-54
Identity = 115/189 (60.85%), Postives = 138/189 (73.02%), Query Frame = 1 

Query: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVT 60
           M+ +N++  Y+ECLRNHAA+LGSYATDGCGEFTLDDTSSP + L CAAC CHRNFHRKVT
Sbjct: 1   MESDNTNDLYKECLRNHAASLGSYATDGCGEFTLDDTSSPYS-LQCAACGCHRNFHRKVT 60

Query: 61  YIGGSGRFS------SAAPTADNLMDYD--------RHAIVEYAATDTGGSKKRFRTKFT 120
           Y   S R        S+     +++DY         R  ++   + D  G KKR RTKFT
Sbjct: 61  YSNSSNRRDHIMHPPSSETVVMDMIDYAEGNNERDFRPPVMVVESGDRSG-KKRHRTKFT 120

Query: 121 TDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTG 176
            +QKEKML FAE+LGWKLQRKD ++E+ERFCR +GI+RQVFKVWMHNHKNS SS SASTG
Sbjct: 121 PEQKEKMLGFAEKLGWKLQRKDEEDEVERFCRGIGISRQVFKVWMHNHKNSSSSTSASTG 180

[Close]
BLAST of CmaCh18G000910 vs. NCBI nr
Match: gi|566205929|ref|XP_006374228.1| (hypothetical protein POPTR_0015s05220g, partial [Populus trichocarpa])

HSP 1 Score: 217.6 bits (553), Expect = 1.7e-53
Identity = 113/188 (60.11%), Postives = 134/188 (71.28%), Query Frame = 1 

Query: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVT 60
           M+ +N++  Y+ECLRNHAA+LGSYATDGCGEFTLDDTSSP + L CAAC CHRNFHRKVT
Sbjct: 1   MESDNTNDLYKECLRNHAASLGSYATDGCGEFTLDDTSSPYS-LQCAACGCHRNFHRKVT 60

Query: 61  YIGGSGRFS------SAAPTADNLMDY-------DRHAIVEYAATDTGGSKKRFRTKFTT 120
           Y   S R        S+      ++DY       D    V    +     KKR+RTKFT 
Sbjct: 61  YSNSSNRRDHIMHPPSSETVVMEMIDYAEGNNERDFRPPVMVVESGERSGKKRYRTKFTP 120

Query: 121 DQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGN 176
           +QKEKML FAE+LGWKLQRKD ++E+E FCR +GI+RQVFKVWMHNHKNS SS SASTGN
Sbjct: 121 EQKEKMLGFAEKLGWKLQRKDEEDEVESFCRGIGISRQVFKVWMHNHKNSSSSTSASTGN 180

The following BLAST results are available for this feature:
BLAST of CmaCh18G000910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZHD2_ARATH1.8e-3445.76Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1[more]
ZHD11_ORYSJ5.7e-3344.81Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. japonica GN=ZHD11 PE=3... [more]
ZHD11_ORYSI5.7e-3344.81Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. indica GN=ZHD11 PE=3 S... [more]
ZHD1_ARATH6.9e-3140.21Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1[more]
ZHD4_ARATH5.9e-3038.86Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana GN=ZHD4 PE=1 SV=1[more]
BLAST of CmaCh18G000910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQK4_CUCSA2.1e-8285.23Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus GN=Csa_1G043040 PE=4 ... [more]
A0A059AWK7_EUCGR7.4e-5664.58Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00572 PE=4 SV=1[more]
U5FLX4_POPTR1.2e-5360.11Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0015s05220g P... [more]
M5WVJ3_PRUPE1.5e-5359.41Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011508mg PE=4 SV=1[more]
A0A072UBE0_MEDTR2.2e-5263.01Uncharacterized protein OS=Medicago truncatula GN=MTR_6g073013 PE=4 SV=1[more]
BLAST of CmaCh18G000910 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24660.19.9e-3645.76 homeobox protein 22[more]
AT5G65410.13.9e-3240.21 homeobox protein 25[more]
AT1G14440.13.3e-3138.86 homeobox protein 31[more]
AT3G50890.17.4e-3139.36 homeobox protein 28[more]
AT2G18350.13.7e-3038.07 homeobox protein 24[more]
BLAST of CmaCh18G000910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449439493|ref|XP_004137520.1|3.0e-8285.23PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis sativus][more]
gi|659066933|ref|XP_008467173.1|1.9e-8184.83PREDICTED: zinc-finger homeodomain protein 10-like [Cucumis melo][more]
gi|702433639|ref|XP_010069461.1|1.1e-5564.58PREDICTED: zinc-finger homeodomain protein 11-like [Eucalyptus grandis][more]
gi|743878022|ref|XP_011035531.1|5.8e-5460.85PREDICTED: zinc-finger homeodomain protein 4-like [Populus euphratica][more]
gi|566205929|ref|XP_006374228.1|1.7e-5360.11hypothetical protein POPTR_0015s05220g, partial [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006455Homeodomain_ZF_HD
IPR006456ZF_HD_homeobox_Cys/His_dimer
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G000910.1CmaCh18G000910.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006455Homeodomain, ZF-HD classTIGRFAMsTIGR01565TIGR01565coord: 98..156
score: 6.6
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPRODOMPD125774coord: 10..58
score: 2.0
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPFAMPF04770ZF-HD_dimercoord: 8..60
score: 8.3
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainTIGRFAMsTIGR01566TIGR01566coord: 9..58
score: 1.6
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPROFILEPS51523ZF_HD_DIMERcoord: 10..59
score: 23
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 94..159
score: 4.5
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 93..157
score: 1.21
NoneNo IPR availablePANTHERPTHR31948FAMILY NOT NAMEDcoord: 8..173
score: 1.7
NoneNo IPR availablePANTHERPTHR31948:SF16ZINC-FINGER HOMEODOMAIN PROTEIN 14coord: 8..173
score: 1.7