Csa1G043040 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G043040
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionZinc finger-homeodomain protein 3; contains IPR006456 (ZF-HD homeobox protein, Cys/His-rich dimerisation domain), IPR009057 (Homeodomain-like)
LocationChr1 : 4686982 .. 4687928 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACCCTCTCTCATTAGGGCTTGTTTGGCATCCCAAAAAAAATCACCATATCTCATTATATACTCAATCAAACAAATCAAAACTCTCACACACAAATTTTATTTTTCAAAGAAAAAGAAAGAAAACAATGGACGGAGAAAACTCAAACTATCATTACAGAGAATGCCTTCGGAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGTGAATTCACTCTCGACGACTCTTCTTCTCCAGCCAACCTCCTCCACTGCGCGGCCTGTGGCTGCCACCGTAACTTCCACCGCAAAGTCACCTACATCGCCGGAGGTGGCCGCTCCTCCGCCGCTACCGCCACCGACGACGACCTCATGGATTACGACCGCCACGCTGTCGTCGAGTACGCCGCTGCCGACACCGAGAGGAGCGGCGGCGGAAGTAAAAAACGGTTCCGTACGAAGTTCACGGCGGATCAGAAAGAGAAGATGTTGGCATTTGCGGAGAAATTAGGTTGGAAATTGCAGAGGAAAGATCTGGACGATGAGATCGAGAGGTTTTGCCGGAGCGTGGGAGTCACTCGCCAAGTTTTTAAGGTTTGGATGCATAATCATAAGAATTCTTTTTCTTCTAATTCTGCATCCACTGGAAATGCCTCTTCTCTAACACAGTAATTAAAGATTAATTAATTATAATTAATTAATCTTTATGTTAATGTGATAAATTAGAGTATAAAAAAAAAAATTAGAGGCCTAATTTTTCTCTCTTCCTTTTCAGATCCCTTTGTTATTCTTTGCTCTAAGGGGTCTAGTCTATATATCAATATATTGCCTTTTTGTTGTAATATATAAAACTAATTTTCTTATGAACAACAACAACAAAAAAATGTATGTTTTAATTTCTCTTTTTTATTTCCCCCCCATTTTTAAGTTTATTTTTGCCAATTTTTTTCATGAATAAA

mRNA sequence

ATGGACGGAGAAAACTCAAACTATCATTACAGAGAATGCCTTCGGAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGTGAATTCACTCTCGACGACTCTTCTTCTCCAGCCAACCTCCTCCACTGCGCGGCCTGTGGCTGCCACCGTAACTTCCACCGCAAAGTCACCTACATCGCCGGAGGTGGCCGCTCCTCCGCCGCTACCGCCACCGACGACGACCTCATGGATTACGACCGCCACGCTGTCGTCGAGTACGCCGCTGCCGACACCGAGAGGAGCGGCGGCGGAAGTAAAAAACGGTTCCGTACGAAGTTCACGGCGGATCAGAAAGAGAAGATGTTGGCATTTGCGGAGAAATTAGGTTGGAAATTGCAGAGGAAAGATCTGGACGATGAGATCGAGAGGTTTTGCCGGAGCGTGGGAGTCACTCGCCAAGTTTTTAAGGTTTGGATGCATAATCATAAGAATTCTTTTTCTTCTAATTCTGCATCCACTGGAAATGCCTCTTCTCTAACACAGTAA

Coding sequence (CDS)

ATGGACGGAGAAAACTCAAACTATCATTACAGAGAATGCCTTCGGAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGTGAATTCACTCTCGACGACTCTTCTTCTCCAGCCAACCTCCTCCACTGCGCGGCCTGTGGCTGCCACCGTAACTTCCACCGCAAAGTCACCTACATCGCCGGAGGTGGCCGCTCCTCCGCCGCTACCGCCACCGACGACGACCTCATGGATTACGACCGCCACGCTGTCGTCGAGTACGCCGCTGCCGACACCGAGAGGAGCGGCGGCGGAAGTAAAAAACGGTTCCGTACGAAGTTCACGGCGGATCAGAAAGAGAAGATGTTGGCATTTGCGGAGAAATTAGGTTGGAAATTGCAGAGGAAAGATCTGGACGATGAGATCGAGAGGTTTTGCCGGAGCGTGGGAGTCACTCGCCAAGTTTTTAAGGTTTGGATGCATAATCATAAGAATTCTTTTTCTTCTAATTCTGCATCCACTGGAAATGCCTCTTCTCTAACACAGTAA

Protein sequence

MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ*
Homology
[Close]
BLAST of Csa1G043040 vs. Swiss-Prot
Match: ZHD2_ARATH (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.6e-37
Identity = 81/175 (46.29%), Postives = 99/175 (56.57%), Query Frame = 1 

Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYI 62
           G  +   YRECL+NHA ++G +A DGC EF         + L CAACGCHRNFHRK T  
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

Query: 63  AGGGRSSAATATDDDLMDYDRHAVVEY-----------AAADTE-----RSGGGSKKRFR 122
            GG      T  +     +     +             A+ D E      S GG+ KRFR
Sbjct: 102 IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFR 161

Query: 123 TKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNS 162
           TKFTA+QKEKMLAFAE+LGW++Q+ D D  +E+FC   GV RQV K+WMHN+KNS
Sbjct: 162 TKFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]
BLAST of Csa1G043040 vs. Swiss-Prot
Match: ZHD11_ORYSJ (Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. japonica GN=ZHD11 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.8e-35
Identity = 86/183 (46.99%), Postives = 102/183 (55.74%), Query Frame = 1 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKV-----TYIAG 69
           YREC+RNHAA LG+YA DGC E+T DD   PA LL CAACGCHRNFHRK         A 
Sbjct: 12  YRECMRNHAAKLGTYANDGCCEYTPDDGH-PAGLL-CAACGCHRNFHRKDFLDGRATAAA 71

Query: 70  GGRSSAATATDDDLM--------DYDRHAVVEYAAAD---TERSGG-GSKKRFRTKFTAD 129
           GG   A       L          Y   A +  A       +  GG G ++R RTKFT +
Sbjct: 72  GGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRTKFTEE 131

Query: 130 QKEKMLAFAEKLGWKLQRKDL-----DDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSA 171
           QK +ML FAE+LGW++ +++      DDE+ RFCR +GV RQVFKVWMHNHK        
Sbjct: 132 QKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHKAGGGGGGG 191

[Close]
BLAST of Csa1G043040 vs. Swiss-Prot
Match: ZHD11_ORYSI (Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. indica GN=ZHD11 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.8e-35
Identity = 86/183 (46.99%), Postives = 102/183 (55.74%), Query Frame = 1 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKV-----TYIAG 69
           YREC+RNHAA LG+YA DGC E+T DD   PA LL CAACGCHRNFHRK         A 
Sbjct: 12  YRECMRNHAAKLGTYANDGCCEYTPDDGH-PAGLL-CAACGCHRNFHRKDFLDGRATAAA 71

Query: 70  GGRSSAATATDDDLM--------DYDRHAVVEYAAAD---TERSGG-GSKKRFRTKFTAD 129
           GG   A       L          Y   A +  A       +  GG G ++R RTKFT +
Sbjct: 72  GGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRTKFTEE 131

Query: 130 QKEKMLAFAEKLGWKLQRKDL-----DDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSA 171
           QK +ML FAE+LGW++ +++      DDE+ RFCR +GV RQVFKVWMHNHK        
Sbjct: 132 QKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHKAGGGGGGG 191

[Close]
BLAST of Csa1G043040 vs. Swiss-Prot
Match: ZHD1_ARATH (Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 7.5e-33
Identity = 75/187 (40.11%), Postives = 102/187 (54.55%), Query Frame = 1 

Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRK-VTY 62
           G  S + +RECL+N A ++G +A DGCGEF         + L CAACGCHRNFHRK + Y
Sbjct: 68  GGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPY 127

Query: 63  -----------------------IAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSG 122
                                  ++     S A      L    R    +     +  +G
Sbjct: 128 FHHAPPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSSAEAG 187

Query: 123 GGSKKRFRTKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNH 166
           GG +KR RTKFTA+QKE+MLA AE++GW++QR+D D+ I+RFC+  GV RQV KVW+HN+
Sbjct: 188 GGIRKRHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLHNN 247

[Close]
BLAST of Csa1G043040 vs. Swiss-Prot
Match: ZHD3_ORYSJ (Zinc-finger homeodomain protein 3 OS=Oryza sativa subsp. japonica GN=ZHD3 PE=3 SV=3)

HSP 1 Score: 137.1 bits (344), Expect = 1.9e-31
Identity = 76/181 (41.99%), Postives = 99/181 (54.70%), Query Frame = 1 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAGGG--- 69
           YRECL+NHAA++G  ATDGCGEF         + L C+ACGCHRNFHRK    A      
Sbjct: 74  YRECLKNHAAAIGGSATDGCGEFMPGGEEGSLDALRCSACGCHRNFHRKELDAAAAPPLH 133

Query: 70  ----RSSAATATDDDLMDYDRHAVVEYAAADTE------------------RSGGGS--K 129
               +     A       +  H +V      T                   R GGG+  +
Sbjct: 134 HHHHQLLGVGAHPRGHGHHHHHLLVAALPPPTRMVMPLSAMHTSESDDAAARPGGGAAAR 193

Query: 130 KRFRTKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSF 164
           KRFRTKFTA+QK +ML FAE++GW+LQ+ + D  ++RFC+ VGV R+V KVWMHN+K++ 
Sbjct: 194 KRFRTKFTAEQKARMLGFAEEVGWRLQKLE-DAVVQRFCQEVGVKRRVLKVWMHNNKHTL 253

[Close]
BLAST of Csa1G043040 vs. TrEMBL
Match: A0A0A0LQK4_CUCSA (Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus GN=Csa_1G043040 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 2.5e-99
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAF 120
           YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAF
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAF 120

Query: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 178
           AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 177

[Close]
BLAST of Csa1G043040 vs. TrEMBL
Match: A0A059AWK7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00572 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.4e-62
Identity = 130/191 (68.06%), Postives = 146/191 (76.44%), Query Frame = 1 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           M+G+N N  YRECLRNHAASLGSYATDGCGEFTLDD+S  +  L CAACGCHRNFHRK+T
Sbjct: 1   MEGDNRNEAYRECLRNHAASLGSYATDGCGEFTLDDTSPGS--LQCAACGCHRNFHRKMT 60

Query: 61  YIAG------------GGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGS--KKRFR 120
           Y++             GGR +A      +L++Y R   +  AA   E  GGGS  KKRFR
Sbjct: 61  YVSAHAGSGGLMVCRSGGRDNAELC-GGELVEYGRGRQLNMAADSPESGGGGSGVKKRFR 120

Query: 121 TKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSN- 177
           TKFT DQKEKMLAFAEKLGWK+QRKD +DEIERFCRSVGV+RQVFKVWMHNHKNS SS+ 
Sbjct: 121 TKFTTDQKEKMLAFAEKLGWKMQRKDEEDEIERFCRSVGVSRQVFKVWMHNHKNSSSSST 180

[Close]
BLAST of Csa1G043040 vs. TrEMBL
Match: K7LEE9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G170500 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 8.6e-60
Identity = 120/172 (69.77%), Postives = 134/172 (77.91%), Query Frame = 1 

Query: 6   SNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAGG 65
           SNY YRECLRNHAASLGSYATDGCGEFTLD  S  +  L CAACGCHRNFHRKVT  A  
Sbjct: 58  SNYLYRECLRNHAASLGSYATDGCGEFTLDVDSVSSPSLQCAACGCHRNFHRKVTCPAVE 117

Query: 66  GRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAFAEKLG 125
           G   A T    D+M+Y     V       ERSGG SKKRFRTKF+A+QKEKML FAEKLG
Sbjct: 118 GGLQAVTGGSGDMMEYSGGGDVGRITEMGERSGG-SKKRFRTKFSAEQKEKMLGFAEKLG 177

Query: 126 WKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 178
           WKLQRK++DDEIERFC+SVGVTRQVFKVWMHNHKN+ ++++ S+ N SSLTQ
Sbjct: 178 WKLQRKEVDDEIERFCKSVGVTRQVFKVWMHNHKNNSNTSTNSSANLSSLTQ 228

[Close]
BLAST of Csa1G043040 vs. TrEMBL
Match: Q5IR72_SOYBN (Zinc finger homeodomain protein SZF-HD1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 8.6e-60
Identity = 120/172 (69.77%), Postives = 134/172 (77.91%), Query Frame = 1 

Query: 6   SNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAGG 65
           SNY YRECLRNHAASLGSYATDGCGEFTLD  S  +  L CAACGCHRNFHRKVT  A  
Sbjct: 11  SNYLYRECLRNHAASLGSYATDGCGEFTLDVDSVSSPSLQCAACGCHRNFHRKVTCPAVE 70

Query: 66  GRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAFAEKLG 125
           G   A T    D+M+Y     V       ERSGG SKKRFRTKF+A+QKEKML FAEKLG
Sbjct: 71  GGLQAVTGGSGDMMEYSGGGDVGRITEMGERSGG-SKKRFRTKFSAEQKEKMLGFAEKLG 130

Query: 126 WKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 178
           WKLQRK++DDEIERFC+SVGVTRQVFKVWMHNHKN+ ++++ S+ N SSLTQ
Sbjct: 131 WKLQRKEVDDEIERFCKSVGVTRQVFKVWMHNHKNNSNTSTNSSANLSSLTQ 181

[Close]
BLAST of Csa1G043040 vs. TrEMBL
Match: M5WVJ3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011508mg PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.8e-57
Identity = 127/200 (63.50%), Postives = 139/200 (69.50%), Query Frame = 1 

Query: 4   ENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIA 63
           +N+N  YRECLRNHAASLGSYATDGCGEFTLDD+S     L CAACGCHRNFHR+VTY A
Sbjct: 8   QNTNEVYRECLRNHAASLGSYATDGCGEFTLDDASPGG--LQCAACGCHRNFHRRVTYAA 67

Query: 64  -------GGGRSSA----------ATATDDDLMDYDRHAVVEYAAADTERSGGGS----- 123
                  G GRSS            +++       D     +    D    GGGS     
Sbjct: 68  TSSQAAGGSGRSSGHHHHHHNRVIMSSSSRGRDPSDNTIATQDQLMDYNAGGGGSPDSGD 127

Query: 124 ----KKRFRTKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHN 177
               KKRFRTKFTA+QKEKMLAFAEKLGWKLQRKDL+DEIERFCRS+GV+RQVFKVWMHN
Sbjct: 128 RMSGKKRFRTKFTAEQKEKMLAFAEKLGWKLQRKDLEDEIERFCRSIGVSRQVFKVWMHN 187

[Close]
BLAST of Csa1G043040 vs. TAIR10
Match: AT4G24660.1 (AT4G24660.1 homeobox protein 22)

HSP 1 Score: 155.2 bits (391), Expect = 3.7e-38
Identity = 81/175 (46.29%), Postives = 99/175 (56.57%), Query Frame = 1 

Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYI 62
           G  +   YRECL+NHA ++G +A DGC EF         + L CAACGCHRNFHRK T  
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

Query: 63  AGGGRSSAATATDDDLMDYDRHAVVEY-----------AAADTE-----RSGGGSKKRFR 122
            GG      T  +     +     +             A+ D E      S GG+ KRFR
Sbjct: 102 IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFR 161

Query: 123 TKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNS 162
           TKFTA+QKEKMLAFAE+LGW++Q+ D D  +E+FC   GV RQV K+WMHN+KNS
Sbjct: 162 TKFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]
BLAST of Csa1G043040 vs. TAIR10
Match: AT5G65410.1 (AT5G65410.1 homeobox protein 25)

HSP 1 Score: 141.7 bits (356), Expect = 4.2e-34
Identity = 75/187 (40.11%), Postives = 102/187 (54.55%), Query Frame = 1 

Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRK-VTY 62
           G  S + +RECL+N A ++G +A DGCGEF         + L CAACGCHRNFHRK + Y
Sbjct: 68  GGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPY 127

Query: 63  -----------------------IAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSG 122
                                  ++     S A      L    R    +     +  +G
Sbjct: 128 FHHAPPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSSAEAG 187

Query: 123 GGSKKRFRTKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNH 166
           GG +KR RTKFTA+QKE+MLA AE++GW++QR+D D+ I+RFC+  GV RQV KVW+HN+
Sbjct: 188 GGIRKRHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLHNN 247

[Close]
BLAST of Csa1G043040 vs. TAIR10
Match: AT2G18350.1 (AT2G18350.1 homeobox protein 24)

HSP 1 Score: 136.3 bits (342), Expect = 1.8e-32
Identity = 75/179 (41.90%), Postives = 93/179 (51.96%), Query Frame = 1 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRK----------- 69
           YREC +NHAAS G +  DGCGEF           L CAAC CHR+FHRK           
Sbjct: 82  YRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFN 141

Query: 70  ----------------VTYIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSK 129
                           +    GGG   AA ++ +DL  +  H        D +      K
Sbjct: 142 SFGHSQRPLGSRHVSPIMMSFGGGGGCAAESSTEDLNKF--HQSFSGYGVD-QFHHYQPK 201

Query: 130 KRFRTKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNS 162
           KRFRTKF  +QKEKM+ FAEK+GW++ + + DDE+ RFCR + V RQVFKVWMHN+K +
Sbjct: 202 KRFRTKFNEEQKEKMMEFAEKIGWRMTKLE-DDEVNRFCREIKVKRQVFKVWMHNNKQA 256

[Close]
BLAST of Csa1G043040 vs. TAIR10
Match: AT3G50890.1 (AT3G50890.1 homeobox protein 28)

HSP 1 Score: 127.5 bits (319), Expect = 8.3e-30
Identity = 73/191 (38.22%), Postives = 94/191 (49.21%), Query Frame = 1 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAGGGRSS 69
           YREC +NHAAS G +  DGC EF           L CAAC CHR+FHRK  Y   G R+S
Sbjct: 60  YRECQKNHAASTGGHVVDGCCEFMAGGEEGTLGALKCAACNCHRSFHRKEVY---GHRNS 119

Query: 70  ----------AATATDDDLMDYDRHAVVEYAAADTERSGGGSK----------------- 129
                     A  +++        H   E     +  S    K                 
Sbjct: 120 KQDHQLMITPAFYSSNSSYKPRVMHPTGEIGRRTSSSSEDMKKILSHRNQNVDGKSLMMM 179

Query: 130 -----KRFRTKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHN 169
                KR RTK   +QKEKM  FAE+LGW++Q+KD ++EI++FCR V + RQVFKVWMHN
Sbjct: 180 MMRKKKRVRTKINEEQKEKMKEFAERLGWRMQKKD-EEEIDKFCRMVNLRRQVFKVWMHN 239

[Close]
BLAST of Csa1G043040 vs. TAIR10
Match: AT5G15210.1 (AT5G15210.1 homeobox protein 30)

HSP 1 Score: 122.9 bits (307), Expect = 2.0e-28
Identity = 75/195 (38.46%), Postives = 98/195 (50.26%), Query Frame = 1 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLD---DSSSPANLLHCAACGCHRNFHRKVT------ 69
           Y+ECL+NHAA +G +A DGCGEF      +S+ PA+L  CAACGCHRNFHR+        
Sbjct: 56  YKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLT-CAACGCHRNFHRREEDPSSLS 115

Query: 70  ----------------------YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSG 129
                                 ++AG        + DDD           Y         
Sbjct: 116 AIVPAIEFRPHNRHQLPPPPPPHLAG------IRSPDDDDSASPPPISSSYMLLALSGGR 175

Query: 130 GG-------SKKRFRTKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVF 167
           GG       S+KRFRTKF+  QKEKM  F+E++GW++ + D D  ++ FCR +GV + VF
Sbjct: 176 GGANTAVPMSRKRFRTKFSQYQKEKMFEFSERVGWRMPKAD-DVVVKEFCREIGVDKSVF 235

[Close]
BLAST of Csa1G043040 vs. NCBI nr
Match: gi|449439493|ref|XP_004137520.1| (PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis sativus])

HSP 1 Score: 369.4 bits (947), Expect = 3.6e-99
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAF 120
           YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAF
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAF 120

Query: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 178
           AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 177

[Close]
BLAST of Csa1G043040 vs. NCBI nr
Match: gi|659066933|ref|XP_008467173.1| (PREDICTED: zinc-finger homeodomain protein 10-like [Cucumis melo])

HSP 1 Score: 358.6 bits (919), Expect = 6.3e-96
Identity = 176/179 (98.32%), Postives = 176/179 (98.32%), Query Frame = 1 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGG-RSSAATATDDDLMDYDRHAVVEYAAADTERS-GGGSKKRFRTKFTADQKEKML 120
           YIAGGG RSSAATATDDDLMDYDRHAVVEYAAADTERS GGGSKKRFRTKFT DQKEKML
Sbjct: 61  YIAGGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGGSKKRFRTKFTVDQKEKML 120

Query: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 178
           AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179

[Close]
BLAST of Csa1G043040 vs. NCBI nr
Match: gi|702433639|ref|XP_010069461.1| (PREDICTED: zinc-finger homeodomain protein 11-like [Eucalyptus grandis])

HSP 1 Score: 246.5 bits (628), Expect = 3.5e-62
Identity = 130/191 (68.06%), Postives = 146/191 (76.44%), Query Frame = 1 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60
           M+G+N N  YRECLRNHAASLGSYATDGCGEFTLDD+S  +  L CAACGCHRNFHRK+T
Sbjct: 1   MEGDNRNEAYRECLRNHAASLGSYATDGCGEFTLDDTSPGS--LQCAACGCHRNFHRKMT 60

Query: 61  YIAG------------GGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGS--KKRFR 120
           Y++             GGR +A      +L++Y R   +  AA   E  GGGS  KKRFR
Sbjct: 61  YVSAHAGSGGLMVCRSGGRDNAELC-GGELVEYGRGRQLNMAADSPESGGGGSGVKKRFR 120

Query: 121 TKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSN- 177
           TKFT DQKEKMLAFAEKLGWK+QRKD +DEIERFCRSVGV+RQVFKVWMHNHKNS SS+ 
Sbjct: 121 TKFTTDQKEKMLAFAEKLGWKMQRKDEEDEIERFCRSVGVSRQVFKVWMHNHKNSSSSST 180

[Close]
BLAST of Csa1G043040 vs. NCBI nr
Match: gi|947090324|gb|KRH38989.1| (hypothetical protein GLYMA_09G170500 [Glycine max])

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-59
Identity = 120/172 (69.77%), Postives = 134/172 (77.91%), Query Frame = 1 

Query: 6   SNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAGG 65
           SNY YRECLRNHAASLGSYATDGCGEFTLD  S  +  L CAACGCHRNFHRKVT  A  
Sbjct: 58  SNYLYRECLRNHAASLGSYATDGCGEFTLDVDSVSSPSLQCAACGCHRNFHRKVTCPAVE 117

Query: 66  GRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAFAEKLG 125
           G   A T    D+M+Y     V       ERSGG SKKRFRTKF+A+QKEKML FAEKLG
Sbjct: 118 GGLQAVTGGSGDMMEYSGGGDVGRITEMGERSGG-SKKRFRTKFSAEQKEKMLGFAEKLG 177

Query: 126 WKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 178
           WKLQRK++DDEIERFC+SVGVTRQVFKVWMHNHKN+ ++++ S+ N SSLTQ
Sbjct: 178 WKLQRKEVDDEIERFCKSVGVTRQVFKVWMHNHKNNSNTSTNSSANLSSLTQ 228

[Close]
BLAST of Csa1G043040 vs. NCBI nr
Match: gi|351723643|ref|NP_001237542.1| (zinc finger homeodomain protein SZF-HD1 [Glycine max])

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-59
Identity = 120/172 (69.77%), Postives = 134/172 (77.91%), Query Frame = 1 

Query: 6   SNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAGG 65
           SNY YRECLRNHAASLGSYATDGCGEFTLD  S  +  L CAACGCHRNFHRKVT  A  
Sbjct: 11  SNYLYRECLRNHAASLGSYATDGCGEFTLDVDSVSSPSLQCAACGCHRNFHRKVTCPAVE 70

Query: 66  GRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAFAEKLG 125
           G   A T    D+M+Y     V       ERSGG SKKRFRTKF+A+QKEKML FAEKLG
Sbjct: 71  GGLQAVTGGSGDMMEYSGGGDVGRITEMGERSGG-SKKRFRTKFSAEQKEKMLGFAEKLG 130

Query: 126 WKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 178
           WKLQRK++DDEIERFC+SVGVTRQVFKVWMHNHKN+ ++++ S+ N SSLTQ
Sbjct: 131 WKLQRKEVDDEIERFCKSVGVTRQVFKVWMHNHKNNSNTSTNSSANLSSLTQ 181

The following BLAST results are available for this feature:
BLAST of Csa1G043040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZHD2_ARATH6.6e-3746.29Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1[more]
ZHD11_ORYSJ2.8e-3546.99Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. japonica GN=ZHD11 PE=3... [more]
ZHD11_ORYSI2.8e-3546.99Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. indica GN=ZHD11 PE=3 S... [more]
ZHD1_ARATH7.5e-3340.11Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1[more]
ZHD3_ORYSJ1.9e-3141.99Zinc-finger homeodomain protein 3 OS=Oryza sativa subsp. japonica GN=ZHD3 PE=3 S... [more]
BLAST of Csa1G043040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQK4_CUCSA2.5e-99100.00Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus GN=Csa_1G043040 PE=4 ... [more]
A0A059AWK7_EUCGR2.4e-6268.06Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00572 PE=4 SV=1[more]
K7LEE9_SOYBN8.6e-6069.77Uncharacterized protein OS=Glycine max GN=GLYMA_09G170500 PE=4 SV=1[more]
Q5IR72_SOYBN8.6e-6069.77Zinc finger homeodomain protein SZF-HD1 OS=Glycine max PE=2 SV=1[more]
M5WVJ3_PRUPE1.8e-5763.50Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011508mg PE=4 SV=1[more]
BLAST of Csa1G043040 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24660.13.7e-3846.29 homeobox protein 22[more]
AT5G65410.14.2e-3440.11 homeobox protein 25[more]
AT2G18350.11.8e-3241.90 homeobox protein 24[more]
AT3G50890.18.3e-3038.22 homeobox protein 28[more]
AT5G15210.12.0e-2838.46 homeobox protein 30[more]
BLAST of Csa1G043040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449439493|ref|XP_004137520.1|3.6e-99100.00PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis sativus][more]
gi|659066933|ref|XP_008467173.1|6.3e-9698.32PREDICTED: zinc-finger homeodomain protein 10-like [Cucumis melo][more]
gi|702433639|ref|XP_010069461.1|3.5e-6268.06PREDICTED: zinc-finger homeodomain protein 11-like [Eucalyptus grandis][more]
gi|947090324|gb|KRH38989.1|1.2e-5969.77hypothetical protein GLYMA_09G170500 [Glycine max][more]
gi|351723643|ref|NP_001237542.1|1.2e-5969.77zinc finger homeodomain protein SZF-HD1 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006455Homeodomain_ZF_HD
IPR006456ZF_HD_homeobox_Cys/His_dimer
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU095388cucumber EST collection version 3.0transcribed_cluster
CU106439cucumber EST collection version 3.0transcribed_cluster
CU161945cucumber EST collection version 3.0transcribed_cluster
CU164726cucumber EST collection version 3.0transcribed_cluster
CU172581cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G043040.1Csa1G043040.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU095388CU095388transcribed_cluster
CU161945CU161945transcribed_cluster
CU106439CU106439transcribed_cluster
CU172581CU172581transcribed_cluster
CU164726CU164726transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006455Homeodomain, ZF-HD classTIGRFAMsTIGR01565TIGR01565coord: 102..160
score: 5.5
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPRODOMPD125774coord: 10..58
score: 3.0
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPFAMPF04770ZF-HD_dimercoord: 8..60
score: 1.2
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainTIGRFAMsTIGR01566TIGR01566coord: 9..58
score: 1.4
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPROFILEPS51523ZF_HD_DIMERcoord: 10..59
score: 23
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 93..163
score: 3.0
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 95..161
score: 7.17
NoneNo IPR availablePANTHERPTHR31948FAMILY NOT NAMEDcoord: 4..177
score: 2.4
NoneNo IPR availablePANTHERPTHR31948:SF16ZINC-FINGER HOMEODOMAIN PROTEIN 14coord: 4..177
score: 2.4