Carg06646 (gene) Silver-seed gourd

Overview
NameCarg06646
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionZinc finger homeodomain protein
LocationCucurbita_argyrosperma_scaffold_012 : 179570 .. 180115 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGGAGGGAATTCTCATTATCATTACAGAGAATGCCTACGGAACCATGCAGCGAATCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACTGTCGACGACACCTCTTCTCCGGGCAACCAGCTCTACTGCGCCGCCTGCAGCTGCCACCGCAACTTCCACCGCAAAGTCACATATATCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGACGCTTTTCCTCCGCCGCCCCCACGGCCGACAACCTCATGGACTACGACCGCCACGCCATCGTCGAGTACGCCGCCGCCGAGACCGGCGGCAGCAAAAAACGGTTCCGAACAAAGTTCACGACGGATCAGAAGGAAAAAATGCTGGCATTTGCAGAGAGATTGGGTTGGAAGTTGCAGAGGAAAGATCTGGACGAGGAGATCGAGAGGTTCTGCCGGAGCGTGGGGATCACTCGCCAAGTTTTCAAGGTTTGGATGCACAATCACAAGAATTCCTTCTCTTCAAATTCTGCATCCACTGGAAATGTCTCTTCTGTAACAAACCAAGATTAA

mRNA sequence

ATGGACGGAGGGAATTCTCATTATCATTACAGAGAATGCCTACGGAACCATGCAGCGAATCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACTGTCGACGACACCTCTTCTCCGGGCAACCAGCTCTACTGCGCCGCCTGCAGCTGCCACCGCAACTTCCACCGCAAAGTCACATATATCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGACGCTTTTCCTCCGCCGCCCCCACGGCCGACAACCTCATGGACTACGACCGCCACGCCATCGTCGAGTACGCCGCCGCCGAGACCGGCGGCAGCAAAAAACGGTTCCGAACAAAGTTCACGACGGATCAGAAGGAAAAAATGCTGGCATTTGCAGAGAGATTGGGTTGGAAGTTGCAGAGGAAAGATCTGGACGAGGAGATCGAGAGGTTCTGCCGGAGCGTGGGGATCACTCGCCAAGTTTTCAAGGTTTGGATGCACAATCACAAGAATTCCTTCTCTTCAAATTCTGCATCCACTGGAAATGTCTCTTCTGTAACAAACCAAGATTAA

Coding sequence (CDS)

ATGGACGGAGGGAATTCTCATTATCATTACAGAGAATGCCTACGGAACCATGCAGCGAATCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACTGTCGACGACACCTCTTCTCCGGGCAACCAGCTCTACTGCGCCGCCTGCAGCTGCCACCGCAACTTCCACCGCAAAGTCACATATATCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGACGCTTTTCCTCCGCCGCCCCCACGGCCGACAACCTCATGGACTACGACCGCCACGCCATCGTCGAGTACGCCGCCGCCGAGACCGGCGGCAGCAAAAAACGGTTCCGAACAAAGTTCACGACGGATCAGAAGGAAAAAATGCTGGCATTTGCAGAGAGATTGGGTTGGAAGTTGCAGAGGAAAGATCTGGACGAGGAGATCGAGAGGTTCTGCCGGAGCGTGGGGATCACTCGCCAAGTTTTCAAGGTTTGGATGCACAATCACAAGAATTCCTTCTCTTCAAATTCTGCATCCACTGGAAATGTCTCTTCTGTAACAAACCAAGATTAA

Protein sequence

MDGGNSHYHYRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKVTYIGGGGGGGGGGRFSSAAPTADNLMDYDRHAIVEYAAAETGGSKKRFRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVTNQD
Homology
[Close]
BLAST of Carg06646 vs. NCBI nr
Match: XP_022954731.1 (zinc-finger homeodomain protein 10-like [Cucurbita moschata])

HSP 1 Score: 327.4 bits (838), Expect = 3.1e-86
Identity = 167/181 (92.27%), Postives = 170/181 (93.92%), Query Frame = 0 

Query: 1   MDGGNSHYHYRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKVT 60
           MDG NSHYHYRECLRNHAANLGSYATDGCGEFT+DDTSSPGNQLYCAACSCHRNFHRKVT
Sbjct: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPGNQLYCAACSCHRNFHRKVT 60

Query: 61  YIXXXXXXXXXXXXXXXXPTADNLMDYDRHAIVEYAAAETGGSKKRFRTKFTTDQKEKML 120
           YI     XXXXXX     PTADNLMDY+RHAIVEYAAA+TGGSKKRFRTKFTTDQKEKML
Sbjct: 61  YI----GXXXXXXFSSAAPTADNLMDYERHAIVEYAAADTGGSKKRFRTKFTTDQKEKML 120

Query: 121 AFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVTNQ 180
           AFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVTNQ
Sbjct: 121 AFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVTNQ 177

Query: 181 D 182
           D
Sbjct: 181 D 177

[Close]
BLAST of Carg06646 vs. NCBI nr
Match: XP_023542338.1 (zinc-finger homeodomain protein 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.6 bits (836), Expect = 5.2e-86
Identity = 161/181 (88.95%), Postives = 163/181 (90.06%), Query Frame = 0 

Query: 1   MDGGNSHYHYRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKVT 60
           MDG NSHYHYRECLRNHAANLGSYATDGCGEFT+DDTSSP NQLYCAACSCHRNFHRKVT
Sbjct: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACSCHRNFHRKVT 60

Query: 61  YIXXXXXXXXXXXXXXXXPTADNLMDYDRHAIVEYAAAETGGSKKRFRTKFTTDQKEKML 120
           YI                PTADNLMDYDRHAIVEYAAA+TGGSKKRFRTKFTTDQKEKML
Sbjct: 61  YI------GGGGRFSSAAPTADNLMDYDRHAIVEYAAADTGGSKKRFRTKFTTDQKEKML 120

Query: 121 AFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVTNQ 180
           AFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVTNQ
Sbjct: 121 AFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVTNQ 175

Query: 181 D 182
           D
Sbjct: 181 D 175

[Close]
BLAST of Carg06646 vs. NCBI nr
Match: XP_022994948.1 (zinc-finger homeodomain protein 10-like [Cucurbita maxima])

HSP 1 Score: 323.9 bits (829), Expect = 3.4e-85
Identity = 159/181 (87.85%), Postives = 162/181 (89.50%), Query Frame = 0 

Query: 1   MDGGNSHYHYRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKVT 60
           MDG NSHYHYRECLRNHAANLGSYATDGCGEFT+DDTSSP NQLYCAAC+CHRNFHRKVT
Sbjct: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVT 60

Query: 61  YIXXXXXXXXXXXXXXXXPTADNLMDYDRHAIVEYAAAETGGSKKRFRTKFTTDQKEKML 120
           YI                PTADNLMDYDRHAIVEYAA +TGGSKKRFRTKFTTDQKEKML
Sbjct: 61  YI------GGSGRFSSAAPTADNLMDYDRHAIVEYAATDTGGSKKRFRTKFTTDQKEKML 120

Query: 121 AFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVTNQ 180
           AFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVTNQ
Sbjct: 121 AFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVTNQ 175

Query: 181 D 182
           D
Sbjct: 181 D 175

[Close]
BLAST of Carg06646 vs. NCBI nr
Match: XP_004137520.1 (PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis sativus] >KGN64200.1 Zinc finger homeodomain protein SZF-HD1 [Cucumis sativus])

HSP 1 Score: 286.2 bits (731), Expect = 7.8e-74
Identity = 148/182 (81.32%), Postives = 160/182 (87.91%), Query Frame = 0 

Query: 1   MDGGNSHYHYRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKVT 60
           MDG NS+YHYRECLRNHAA+LGSYATDGCGEFT+DD+SSP N L+CAAC CHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIXXXXXXXXXXXXXXXXPTADNLMDYDRHAIVEYAAAET----GGSKKRFRTKFTTDQK 120
           YI     XXXXXXX       D+LMDYDRHA+VEYAAA+T    GGSKKRFRTKFT DQK
Sbjct: 61  YIAGGGRXXXXXXXD------DDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQK 120

Query: 121 EKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSS 179
           EKMLAFAE+LGWKLQRKDLD+EIERFCRSVG+TRQVFKVWMHNHKNSFSSNSASTGN SS
Sbjct: 121 EKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASS 176

[Close]
BLAST of Carg06646 vs. NCBI nr
Match: XP_022924045.1 (zinc-finger homeodomain protein 8-like [Cucurbita moschata] >XP_023001812.1 zinc-finger homeodomain protein 8-like [Cucurbita maxima] >XP_023519958.1 zinc-finger homeodomain protein 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.2 bits (674), Expect = 3.2e-67
Identity = 132/182 (72.53%), Postives = 146/182 (80.22%), Query Frame = 0 

Query: 1   MDGGNSHYHYRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKVT 60
           MDG NS+YHYRECLRNHAA+LGSYATDGCGEFT+DDTSSP N L+C AC CHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60

Query: 61  YIXXXXXXXXXXXXXXXXPTADNLMDYDRHAIVEYAAAET----GGSKKRFRTKFTTDQK 120
           YI                 TAD+LMDYD+      AA +T    GG KKRFRTKFT DQ+
Sbjct: 61  YI--------AGGGRSSAATADDLMDYDQ------AATDTERSGGGGKKRFRTKFTADQR 120

Query: 121 EKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSS 179
           EKMLAFAE+LGWKLQR+DLD+EIERFCRSVG+TRQVFKVWMHNHKNSFSSNSASTGN SS
Sbjct: 121 EKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASS 168

[Close]
BLAST of Carg06646 vs. TAIR10
Match: AT4G24660.1 (homeobox protein 22)

HSP 1 Score: 132.1 bits (331), Expect = 3.4e-31
Identity = 74/175 (42.29%), Postives = 88/175 (50.29%), Query Frame = 0 

Query: 3   GGNSHYHYRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKVT-- 62
           G  +   YRECL+NHA N+G +A DGC EF         + L CAAC CHRNFHRK T  
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

Query: 63  -----------YIXXXXXXXXXXXXXXXXPTAD-NLMDYDRHAIVEYAAAETGGSKKRFR 122
                      Y                 P A                        KRFR
Sbjct: 102 IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPXXXXXXXXXXXXXXXXXXXXKRFR 161

Query: 123 TKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNS 164
           TKFT +QKEKMLAFAERLGW++Q+ D D  +E+FC   G+ RQV K+WMHN+KNS
Sbjct: 162 TKFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]
BLAST of Carg06646 vs. TAIR10
Match: AT5G65410.1 (homeobox protein 25)

HSP 1 Score: 129.0 bits (323), Expect = 2.9e-30
Identity = 87/182 (47.80%), Postives = 112/182 (61.54%), Query Frame = 0 

Query: 8   YHYRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRK-VTYIXXXX 67
           + +RECL+N A N+G +A DGCGEF         + L CAAC CHRNFHRK + Y XXXX
Sbjct: 73  FRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPYXXXXX 132

Query: 68  XXXXXXXXXXXXPTADNLMDYDRHAI--------------------VEYAAAETGGS-KK 127
           XXXXXXXXXXXX                                  +E ++AE GG  +K
Sbjct: 133 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMETSSAEAGGGIRK 192

Query: 128 RFRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFS 168
           R RTKFT +QKE+MLA AER+GW++QR+D DE I+RFC+  G+ RQV KVW+HN+K++  
Sbjct: 193 RHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLHNNKHTLG 252

[Close]
BLAST of Carg06646 vs. TAIR10
Match: AT1G14440.1 (homeobox protein 31)

HSP 1 Score: 125.2 bits (313), Expect = 4.2e-29
Identity = 73/195 (37.44%), Postives = 100/195 (51.28%), Query Frame = 0 

Query: 10  YRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKVTYIXXXXXXX 69
           Y+ECL+NHAA +G  ATDGCGEF           L C+AC+CHRNFHRK   +       
Sbjct: 90  YKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRK--EVEGELAAT 149

Query: 70  XXXXXXXXXPTADNLMDYDR------HAIV-----------------EYAAAETG----- 129
                    P    ++++ +      H ++                 E    E G     
Sbjct: 150 AMSPYHQHPPHRKLMLNHQKIRSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTAS 209

Query: 130 --------GSKKRFRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVF 169
                     KKRFRTKFT +QKEKML+FAE++GWK+QR++ D  ++RFC  +G+ R+V 
Sbjct: 210 RSLPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQE-DCVVQRFCEEIGVKRRVL 269

[Close]
BLAST of Carg06646 vs. TAIR10
Match: AT3G28920.1 (homeobox protein 34)

HSP 1 Score: 124.0 bits (310), Expect = 9.3e-29
Identity = 92/219 (42.01%), Postives = 120/219 (54.79%), Query Frame = 0 

Query: 10  YRECLRNHAANLGSYATDGCGEFTVDDTSSPGN--QLYCAACSCHRNFHRKVTYIXXXXX 69
           Y+ECL+NHAA +G +A DGCGEF    +S+P +   L CAAC CHRNFHR     XXXXX
Sbjct: 52  YKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRXXXXXXXXXX 111

Query: 70  XXXXXXXXXXXPTADN-------------------------------------------- 129
           XXXXXXXXXXX                                                 
Sbjct: 112 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTA 171

Query: 130 -LMDYDRHAIVEYAAAETGGSKKRFRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERF 182
              D +  A   + +A T GS+KRFRTKF+++QKEKM  FA+R+GWK+Q++D ++E+  F
Sbjct: 172 PFSDLNFAAAANHLSA-TPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRD-EDEVRDF 231

[Close]
BLAST of Carg06646 vs. TAIR10
Match: AT2G18350.1 (homeobox protein 24)

HSP 1 Score: 120.9 bits (302), Expect = 7.9e-28
Identity = 66/179 (36.87%), Postives = 90/179 (50.28%), Query Frame = 0 

Query: 10  YRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKV---TYIXXXX 69
           YREC +NHAA+ G +  DGCGEF           L CAAC CHR+FHRK     ++    
Sbjct: 82  YRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFN 141

Query: 70  XXXXXXXXXXXXPTADNLMDYDRHAIVEYAAAETGGS----------------------K 129
                         +  +M +         AAE+                         K
Sbjct: 142 SFGHSQRPLGSRHVSPIMMSFGG---XXXCAAESSTEDLNKFHQSFSGYGVDQFHHYQPK 201

Query: 130 KRFRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNS 164
           KRFRTKF  +QKEKM+ FAE++GW++ + + D+E+ RFCR + + RQVFKVWMHN+K +
Sbjct: 202 KRFRTKFNEEQKEKMMEFAEKIGWRMTKLE-DDEVNRFCREIKVKRQVFKVWMHNNKQA 256

[Close]
BLAST of Carg06646 vs. Swiss-Prot
Match: sp|Q9SB61|ZHD2_ARATH (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.2e-30
Identity = 74/175 (42.29%), Postives = 88/175 (50.29%), Query Frame = 0 

Query: 3   GGNSHYHYRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKVT-- 62
           G  +   YRECL+NHA N+G +A DGC EF         + L CAAC CHRNFHRK T  
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

Query: 63  -----------YIXXXXXXXXXXXXXXXXPTAD-NLMDYDRHAIVEYAAAETGGSKKRFR 122
                      Y                 P A                        KRFR
Sbjct: 102 IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPXXXXXXXXXXXXXXXXXXXXKRFR 161

Query: 123 TKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNS 164
           TKFT +QKEKMLAFAERLGW++Q+ D D  +E+FC   G+ RQV K+WMHN+KNS
Sbjct: 162 TKFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]
BLAST of Carg06646 vs. Swiss-Prot
Match: sp|Q9FKP8|ZHD1_ARATH (Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.2e-29
Identity = 87/182 (47.80%), Postives = 112/182 (61.54%), Query Frame = 0 

Query: 8   YHYRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRK-VTYIXXXX 67
           + +RECL+N A N+G +A DGCGEF         + L CAAC CHRNFHRK + Y XXXX
Sbjct: 73  FRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPYXXXXX 132

Query: 68  XXXXXXXXXXXXPTADNLMDYDRHAI--------------------VEYAAAETGGS-KK 127
           XXXXXXXXXXXX                                  +E ++AE GG  +K
Sbjct: 133 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMETSSAEAGGGIRK 192

Query: 128 RFRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFS 168
           R RTKFT +QKE+MLA AER+GW++QR+D DE I+RFC+  G+ RQV KVW+HN+K++  
Sbjct: 193 RHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLHNNKHTLG 252

[Close]
BLAST of Carg06646 vs. Swiss-Prot
Match: sp|Q9M9S0|ZHD4_ARATH (Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZHD4 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 7.5e-28
Identity = 73/195 (37.44%), Postives = 100/195 (51.28%), Query Frame = 0 

Query: 10  YRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKVTYIXXXXXXX 69
           Y+ECL+NHAA +G  ATDGCGEF           L C+AC+CHRNFHRK   +       
Sbjct: 90  YKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRK--EVEGELAAT 149

Query: 70  XXXXXXXXXPTADNLMDYDR------HAIV-----------------EYAAAETG----- 129
                    P    ++++ +      H ++                 E    E G     
Sbjct: 150 AMSPYHQHPPHRKLMLNHQKIRSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTAS 209

Query: 130 --------GSKKRFRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVF 169
                     KKRFRTKFT +QKEKML+FAE++GWK+QR++ D  ++RFC  +G+ R+V 
Sbjct: 210 RSLPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQE-DCVVQRFCEEIGVKRRVL 269

[Close]
BLAST of Carg06646 vs. Swiss-Prot
Match: sp|Q9LHF0|ZHD9_ARATH (Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.7e-27
Identity = 92/219 (42.01%), Postives = 120/219 (54.79%), Query Frame = 0 

Query: 10  YRECLRNHAANLGSYATDGCGEFTVDDTSSPGN--QLYCAACSCHRNFHRKVTYIXXXXX 69
           Y+ECL+NHAA +G +A DGCGEF    +S+P +   L CAAC CHRNFHR     XXXXX
Sbjct: 52  YKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRXXXXXXXXXX 111

Query: 70  XXXXXXXXXXXPTADN-------------------------------------------- 129
           XXXXXXXXXXX                                                 
Sbjct: 112 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTA 171

Query: 130 -LMDYDRHAIVEYAAAETGGSKKRFRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERF 182
              D +  A   + +A T GS+KRFRTKF+++QKEKM  FA+R+GWK+Q++D ++E+  F
Sbjct: 172 PFSDLNFAAAANHLSA-TPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRD-EDEVRDF 231

[Close]
BLAST of Carg06646 vs. Swiss-Prot
Match: sp|Q9ZPW7|ZHD6_ARATH (Zinc-finger homeodomain protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZHD6 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-26
Identity = 66/179 (36.87%), Postives = 90/179 (50.28%), Query Frame = 0 

Query: 10  YRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKV---TYIXXXX 69
           YREC +NHAA+ G +  DGCGEF           L CAAC CHR+FHRK     ++    
Sbjct: 82  YRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFN 141

Query: 70  XXXXXXXXXXXXPTADNLMDYDRHAIVEYAAAETGGS----------------------K 129
                         +  +M +         AAE+                         K
Sbjct: 142 SFGHSQRPLGSRHVSPIMMSFGG---XXXCAAESSTEDLNKFHQSFSGYGVDQFHHYQPK 201

Query: 130 KRFRTKFTTDQKEKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNS 164
           KRFRTKF  +QKEKM+ FAE++GW++ + + D+E+ RFCR + + RQVFKVWMHN+K +
Sbjct: 202 KRFRTKFNEEQKEKMMEFAEKIGWRMTKLE-DDEVNRFCREIKVKRQVFKVWMHNNKQA 256

[Close]
BLAST of Carg06646 vs. TrEMBL
Match: tr|A0A0A0LQK4|A0A0A0LQK4_CUCSA (Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G043040 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 5.2e-74
Identity = 148/182 (81.32%), Postives = 160/182 (87.91%), Query Frame = 0 

Query: 1   MDGGNSHYHYRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKVT 60
           MDG NS+YHYRECLRNHAA+LGSYATDGCGEFT+DD+SSP N L+CAAC CHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIXXXXXXXXXXXXXXXXPTADNLMDYDRHAIVEYAAAET----GGSKKRFRTKFTTDQK 120
           YI     XXXXXXX       D+LMDYDRHA+VEYAAA+T    GGSKKRFRTKFT DQK
Sbjct: 61  YIAGGGRXXXXXXXD------DDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQK 120

Query: 121 EKMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSS 179
           EKMLAFAE+LGWKLQRKDLD+EIERFCRSVG+TRQVFKVWMHNHKNSFSSNSASTGN SS
Sbjct: 121 EKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASS 176

[Close]
BLAST of Carg06646 vs. TrEMBL
Match: tr|A0A1S3CU70|A0A1S3CU70_CUCME (zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 4.3e-60
Identity = 135/178 (75.84%), Postives = 144/178 (80.90%), Query Frame = 0 

Query: 1   MDGGNSHYHYRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKVT 60
           MDG NS+YHYRECLRNHAA+LGSYATDGCGEFT+DD+SSP N L+CAAC CHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIXXXXXXXXXXXXXXXXPTADNLMDYDRHAIVEYAAAETGGSKKRFRTKFTTDQKEKML 120
           YIXXXXXXXXXXXXXXXX                            FRTKFT DQKEKML
Sbjct: 61  YIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRTKFTVDQKEKML 120

Query: 121 AFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVT 179
           AFAE+LGWKLQRKDLD+EIERFCRSVG+TRQVFKVWMHNHKNSFSSNSASTGN SS+T
Sbjct: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLT 178

[Close]
BLAST of Carg06646 vs. TrEMBL
Match: tr|A0A2I4EVI3|A0A2I4EVI3_9ROSI (zinc-finger homeodomain protein 11-like OS=Juglans regia OX=51240 GN=LOC108993100 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 7.8e-54
Identity = 119/178 (66.85%), Postives = 132/178 (74.16%), Query Frame = 0 

Query: 10  YRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKVTY----IXXX 69
           YRECLRNHAA+LGSYATDGCGEFT+DD SSPG  L CAAC CHRNFHRKVTY    +   
Sbjct: 16  YRECLRNHAASLGSYATDGCGEFTLDD-SSPG-CLQCAACGCHRNFHRKVTYVPTHVRGG 75

Query: 70  XXXXXXXXXXXXXPTADNLMDY---DRHAIVEYA--AAETGGSKKRFRTKFTTDQKEKML 129
                         T   LMDY    R A++  +  AAE   SKKRFRTKFT DQKEKML
Sbjct: 76  GASYSSRGGREVPETTAELMDYTGGGRQAVMVESGEAAERNFSKKRFRTKFTQDQKEKML 135

Query: 130 AFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVT 179
           AFAE+L WKLQRKDLD+EIERFCR VG++RQVFKVWMHNHKN+ SS+SASTGN SS+T
Sbjct: 136 AFAEKLEWKLQRKDLDDEIERFCRGVGVSRQVFKVWMHNHKNASSSSSASTGNASSLT 191

[Close]
BLAST of Carg06646 vs. TrEMBL
Match: tr|A0A2N9I0P1|A0A2N9I0P1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45303 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.2e-51
Identity = 113/181 (62.43%), Postives = 130/181 (71.82%), Query Frame = 0 

Query: 1   MDGGNSHYHYRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKVT 60
           M+  N++  YRECLRNHAA+LGSYATDGCGEFT+D+T SPG+ L CAAC CHRNFHRKVT
Sbjct: 1   MEAENTNDIYRECLRNHAASLGSYATDGCGEFTLDNT-SPGS-LQCAACGCHRNFHRKVT 60

Query: 61  YI---XXXXXXXXXXXXXXXXPTADNLMDYDRHAIVEYAAAETGGSKKRFRTKFTTDQKE 120
           Y+                    T   LMDY               +KKRFRTKFT DQKE
Sbjct: 61  YVPPHGRGVVVSCSSRGQEQETTXTELMDYSGGG----GDMADRSNKKRFRTKFTPDQKE 120

Query: 121 KMLAFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSV 179
           KMLAFAE+LGWKLQRKDL++EIERFCR VG++RQVFKVWMHNHKN  S++SASTGN SS+
Sbjct: 121 KMLAFAEKLGWKLQRKDLEDEIERFCRGVGVSRQVFKVWMHNHKNLNSASSASTGNASSL 175

[Close]
BLAST of Carg06646 vs. TrEMBL
Match: tr|A0A061FW93|A0A061FW93_THECC (ZF-HD homeobox protein OS=Theobroma cacao OX=3641 GN=TCM_013233 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.3e-50
Identity = 105/171 (61.40%), Postives = 124/171 (72.51%), Query Frame = 0 

Query: 10  YRECLRNHAANLGSYATDGCGEFTVDDTSSPGNQLYCAACSCHRNFHRKVTYIXXXXXXX 69
           YRECLRNHAA+LGSYATDGCGEFT+DDT SP N L CAAC CHRNFHRKV+Y        
Sbjct: 10  YRECLRNHAASLGSYATDGCGEFTLDDT-SPSN-LQCAACGCHRNFHRKVSYCSSSRSHG 69

Query: 70  XXXXXXXXXPTADNLMDYDRHAIVEYAAAETGGSKKRFRTKFTTDQKEKMLAFAERLGWK 129
                       D      R  +VE   A     KKRFRTKFT +QKEKML FAE+LGWK
Sbjct: 70  DPENTVELIDYGDGGSGGRRPVVVESTGAADRCGKKRFRTKFTAEQKEKMLGFAEKLGWK 129

Query: 130 LQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVTNQ 181
           LQR+D ++E+E+FCR++G++RQVFKVWMHNHK+S S++SAST NVSS+T Q
Sbjct: 130 LQRRDEEDEVEKFCRAIGVSRQVFKVWMHNHKSSSSTSSASTCNVSSLTTQ 178

The following BLAST results are available for this feature:
BLAST of Carg06646 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022954731.13.1e-8692.27zinc-finger homeodomain protein 10-like [Cucurbita moschata][more]
XP_023542338.15.2e-8688.95zinc-finger homeodomain protein 5-like [Cucurbita pepo subsp. pepo][more]
XP_022994948.13.4e-8587.85zinc-finger homeodomain protein 10-like [Cucurbita maxima][more]
XP_004137520.17.8e-7481.32PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis sativus] >KGN64200.1 ... [more]
XP_022924045.13.2e-6772.53zinc-finger homeodomain protein 8-like [Cucurbita moschata] >XP_023001812.1 zinc... [more]
BLAST of Carg06646 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24660.13.4e-3142.29homeobox protein 22[more]
AT5G65410.12.9e-3047.80homeobox protein 25[more]
AT1G14440.14.2e-2937.44homeobox protein 31[more]
AT3G28920.19.3e-2942.01homeobox protein 34[more]
AT2G18350.17.9e-2836.87homeobox protein 24[more]
BLAST of Carg06646 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SB61|ZHD2_ARATH6.2e-3042.29Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S... [more]
sp|Q9FKP8|ZHD1_ARATH5.2e-2947.80Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S... [more]
sp|Q9M9S0|ZHD4_ARATH7.5e-2837.44Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZHD4 PE=1 S... [more]
sp|Q9LHF0|ZHD9_ARATH1.7e-2742.01Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 S... [more]
sp|Q9ZPW7|ZHD6_ARATH1.4e-2636.87Zinc-finger homeodomain protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZHD6 PE=1 S... [more]
BLAST of Carg06646 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LQK4|A0A0A0LQK4_CUCSA5.2e-7481.32Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G0430... [more]
tr|A0A1S3CU70|A0A1S3CU70_CUCME4.3e-6075.84zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 P... [more]
tr|A0A2I4EVI3|A0A2I4EVI3_9ROSI7.8e-5466.85zinc-finger homeodomain protein 11-like OS=Juglans regia OX=51240 GN=LOC10899310... [more]
tr|A0A2N9I0P1|A0A2N9I0P1_FAGSY1.2e-5162.43Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45303 PE=4 SV=1[more]
tr|A0A061FW93|A0A061FW93_THECC2.3e-5061.40ZF-HD homeobox protein OS=Theobroma cacao OX=3641 GN=TCM_013233 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR006455Homeodomain_ZF_HD
IPR006456ZF_HD_homeobox_Cys/His_dimer
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06646-RACarg06646-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 93..168
e-value: 3.5E-32
score: 112.2
NoneNo IPR availablePANTHERPTHR31948:SF16ZINC-FINGER HOMEODOMAIN PROTEIN 13-RELATEDcoord: 7..173
NoneNo IPR availablePANTHERPTHR31948FAMILY NOT NAMEDcoord: 7..173
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPFAMPF04770ZF-HD_dimercoord: 8..60
e-value: 4.5E-23
score: 81.2
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainTIGRFAMTIGR01566TIGR01566coord: 9..58
e-value: 7.1E-22
score: 75.6
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPRODOMPD125774coord: 10..58
e-value: 9.0E-16
score: 202.0
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPROSITEPS51523ZF_HD_DIMERcoord: 10..59
score: 22.972
IPR006455Homeodomain, ZF-HD classTIGRFAMTIGR01565TIGR01565coord: 104..162
e-value: 7.0E-28
score: 94.3
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 99..163