CsaV3_1G007410 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTCTCTTAAAAATCATAGTTTAAATCTTTCTATGGATCCGGTAAATTTTTTATATGAATCACACATGCATGTATGTATACATACATGCATGTATATCTTTGTATTATGTGAGCTTGATATAATATATACACACATACATAAAAGTGAATCACTTTTAATCAAAACTTGAGTACCCTCTCTCATTAGGGCTTGTTTGGCATCCCAAAAAAAATCACCATATCTCATTATATACTCAATCAAACAAATCAAAACTCTCACACACAAATTTTATTTTTCAAAGAAAAAGAAAGAAAACAATGGACGGAGAAAACTCAAACTATCATTACAGAGAATGCCTTCGGAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGTGAATTCACTCTCGACGACTCTTCTTCTCCAGCCAACCTCCTCCACTGCGCGGCCTGTGGCTGCCACCGTAACTTCCACCGCAAAGTCACCTACATCGCCGGAGGTGGCCGCTCCTCCGCCGCTACCGCCACCGACGACGACCTCATGGATTACGACCGCCACGCTGTCGTCGAGTACGCCGCTGCCGACACCGAGAGGAGCGGCGGCGGAAGTAAAAAACGGTTCCGTACGAAGTTCACGGCGGATCAGAAAGAGAAGATGTTGGCATTTGCGGAGAAATTAGGTTGGAAATTGCAGAGGAAAGATCTGGACGATGAGATCGAGAGGTTTTGCCGGAGCGTGGGAGTCACTCGCCAAGTTTTTAAGGTTTGGATGCATAATCATAAGAATTCTTTTTCTTCTAATTCTGCATCCACTGGAAATGCCTCTTCTCTAACACAGTAATTAAAGATTAATTAATTATAATTAATTAATCTTTATGTTAATGTGATAAATTAGAGTATAAAAAAAAAAATTAGAGGCCTAATTTTTCTCTCTTCCTTTTCAGATCCCTTTGTTATTCTTTGCTCTAAGGGGTCTAGTCTATATATCAATATATTGCCTTTTTGTTGTAATATATAAAACTAATTTTCTTATGAACAACAACAACAAAAAAATGTATGTTTTAATTTCTCTTTTTTATTTCCCCCCCATTTTTAAGTTTATTTTTGCCAATTTTTTTCATGAATAAACTGACACTGACCCATGCATAGAACAGACGACAGGCTCTGATCTCTGAATTATTGACCATTTTCCTGTTTCTTCCTTCAATTATTGGTTCATCTTTTTTTTAAC ATGGACGGAGAAAACTCAAACTATCATTACAGAGAATGCCTTCGGAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGTGAATTCACTCTCGACGACTCTTCTTCTCCAGCCAACCTCCTCCACTGCGCGGCCTGTGGCTGCCACCGTAACTTCCACCGCAAAGTCACCTACATCGCCGGAGGTGGCCGCTCCTCCGCCGCTACCGCCACCGACGACGACCTCATGGATTACGACCGCCACGCTGTCGTCGAGTACGCCGCTGCCGACACCGAGAGGAGCGGCGGCGGAAGTAAAAAACGGTTCCGTACGAAGTTCACGGCGGATCAGAAAGAGAAGATGTTGGCATTTGCGGAGAAATTAGGTTGGAAATTGCAGAGGAAAGATCTGGACGATGAGATCGAGAGGTTTTGCCGGAGCGTGGGAGTCACTCGCCAAGTTTTTAAGGTTTGGATGCATAATCATAAGAATTCTTTTTCTTCTAATTCTGCATCCACTGGAAATGCCTCTTCTCTAACACAGTAA ATGGACGGAGAAAACTCAAACTATCATTACAGAGAATGCCTTCGGAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGTGAATTCACTCTCGACGACTCTTCTTCTCCAGCCAACCTCCTCCACTGCGCGGCCTGTGGCTGCCACCGTAACTTCCACCGCAAAGTCACCTACATCGCCGGAGGTGGCCGCTCCTCCGCCGCTACCGCCACCGACGACGACCTCATGGATTACGACCGCCACGCTGTCGTCGAGTACGCCGCTGCCGACACCGAGAGGAGCGGCGGCGGAAGTAAAAAACGGTTCCGTACGAAGTTCACGGCGGATCAGAAAGAGAAGATGTTGGCATTTGCGGAGAAATTAGGTTGGAAATTGCAGAGGAAAGATCTGGACGATGAGATCGAGAGGTTTTGCCGGAGCGTGGGAGTCACTCGCCAAGTTTTTAAGGTTTGGATGCATAATCATAAGAATTCTTTTTCTTCTAATTCTGCATCCACTGGAAATGCCTCTTCTCTAACACAGTAA MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
BLAST of CsaV3_1G007410 vs. NCBI nr
Match: XP_004137520.1 (PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis sativus] >KGN64200.1 Zinc finger homeodomain protein SZF-HD1 [Cucumis sativus]) HSP 1 Score: 350.5 bits (898), Expect = 3.3e-93 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. NCBI nr
Match: XP_022924045.1 (zinc-finger homeodomain protein 8-like [Cucurbita moschata] >XP_023001812.1 zinc-finger homeodomain protein 8-like [Cucurbita maxima] >XP_023519958.1 zinc-finger homeodomain protein 8-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 310.1 bits (793), Expect = 5.0e-81 Identity = 153/177 (86.44%), Postives = 158/177 (89.27%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. NCBI nr
Match: XP_023542338.1 (zinc-finger homeodomain protein 5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 310.1 bits (793), Expect = 5.0e-81 Identity = 149/176 (84.66%), Postives = 159/176 (90.34%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. NCBI nr
Match: XP_022994948.1 (zinc-finger homeodomain protein 10-like [Cucurbita maxima]) HSP 1 Score: 306.2 bits (783), Expect = 7.2e-80 Identity = 147/176 (83.52%), Postives = 157/176 (89.20%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. NCBI nr
Match: XP_022954731.1 (zinc-finger homeodomain protein 10-like [Cucurbita moschata]) HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75 Identity = 145/178 (81.46%), Postives = 156/178 (87.64%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. TAIR10
Match: AT4G24660.1 (homeobox protein 22) HSP 1 Score: 139.0 bits (349), Expect = 2.8e-33 Identity = 74/175 (42.29%), Postives = 93/175 (53.14%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. TAIR10
Match: AT1G14440.1 (homeobox protein 31) HSP 1 Score: 131.3 bits (329), Expect = 5.7e-31 Identity = 76/196 (38.78%), Postives = 97/196 (49.49%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. TAIR10
Match: AT2G18350.1 (homeobox protein 24) HSP 1 Score: 129.0 bits (323), Expect = 2.8e-30 Identity = 75/176 (42.61%), Postives = 95/176 (53.98%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. TAIR10
Match: AT5G65410.1 (homeobox protein 25) HSP 1 Score: 129.0 bits (323), Expect = 2.8e-30 Identity = 76/182 (41.76%), Postives = 102/182 (56.04%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. TAIR10
Match: AT3G28920.1 (homeobox protein 34) HSP 1 Score: 127.9 bits (320), Expect = 6.3e-30 Identity = 85/210 (40.48%), Postives = 112/210 (53.33%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. Swiss-Prot
Match: sp|Q9SB61|ZHD2_ARATH (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.0e-32 Identity = 74/175 (42.29%), Postives = 93/175 (53.14%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. Swiss-Prot
Match: sp|Q9M9S0|ZHD4_ARATH (Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZHD4 PE=1 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.0e-29 Identity = 76/196 (38.78%), Postives = 97/196 (49.49%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. Swiss-Prot
Match: sp|Q9FKP8|ZHD1_ARATH (Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 5.1e-29 Identity = 76/182 (41.76%), Postives = 102/182 (56.04%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. Swiss-Prot
Match: sp|Q9ZPW7|ZHD6_ARATH (Zinc-finger homeodomain protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZHD6 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 5.1e-29 Identity = 75/176 (42.61%), Postives = 95/176 (53.98%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. Swiss-Prot
Match: sp|Q9LHF0|ZHD9_ARATH (Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.1e-28 Identity = 85/210 (40.48%), Postives = 112/210 (53.33%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. TrEMBL
Match: tr|A0A0A0LQK4|A0A0A0LQK4_CUCSA (Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G043040 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 2.2e-93 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. TrEMBL
Match: tr|A0A1S3CU70|A0A1S3CU70_CUCME (zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 PE=4 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 5.1e-66 Identity = 141/179 (78.77%), Postives = 141/179 (78.77%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. TrEMBL
Match: tr|A0A2N9I0P1|A0A2N9I0P1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45303 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 6.7e-58 Identity = 119/178 (66.85%), Postives = 137/178 (76.97%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. TrEMBL
Match: tr|A0A2I4EVI3|A0A2I4EVI3_9ROSI (zinc-finger homeodomain protein 11-like OS=Juglans regia OX=51240 GN=LOC108993100 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 8.7e-58 Identity = 129/185 (69.73%), Postives = 139/185 (75.14%), Query Frame = 0
BLAST of CsaV3_1G007410 vs. TrEMBL
Match: tr|K7LEE9|K7LEE9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_09G170500 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.4e-55 Identity = 117/172 (68.02%), Postives = 128/172 (74.42%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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