CmaCh13G009700 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh13G009700
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionZinc finger homeodomain protein
LocationCma_Chr13 : 7560165 .. 7560674 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGGAGAGAACTCCAACTATCATTACAGAGAATGCCTCCGGAACCATGCAGCCAGTCTGGGCAGTTACGCCACCGATGGCTGCGGCGAATTCACCCTCGACGACACCTCCTCTCCGACCAACAACCTCCACTGCGTTGCTTGCGGCTGCCACCGTAACTTCCACCGCAAAATCACTTACATCGCCGGCGGTGGCCGCTCTTCCGCCGCCACCGCAGACGATCTCATGGACTACGACCAAGCCGCAACCGATACCGAGAGGAGCGGCGGCGGAGGAAAAAAACGGTTCCGTACGAAGTTCACGGCGGATCAGAGAGAGAAGATGCTGGCATTTGCAGAGAAATTAGGTTGGAAATTGCAGAGAAGAGATCTTGACGACGAGATCGAGAGGTTCTGCCGGAGCGTGGGCGTCACTCGCCAGGTTTTCAAGGTTTGGATGCACAATCACAAGAATTCTTTTTCTTCTAATTCTGCATCCACTGGAAATGCCTCTTCTCTAACACAGTAA

mRNA sequence

ATGGACGGAGAGAACTCCAACTATCATTACAGAGAATGCCTCCGGAACCATGCAGCCAGTCTGGGCAGTTACGCCACCGATGGCTGCGGCGAATTCACCCTCGACGACACCTCCTCTCCGACCAACAACCTCCACTGCGTTGCTTGCGGCTGCCACCGTAACTTCCACCGCAAAATCACTTACATCGCCGGCGGTGGCCGCTCTTCCGCCGCCACCGCAGACGATCTCATGGACTACGACCAAGCCGCAACCGATACCGAGAGGAGCGGCGGCGGAGGAAAAAAACGGTTCCGTACGAAGTTCACGGCGGATCAGAGAGAGAAGATGCTGGCATTTGCAGAGAAATTAGGTTGGAAATTGCAGAGAAGAGATCTTGACGACGAGATCGAGAGGTTCTGCCGGAGCGTGGGCGTCACTCGCCAGGTTTTCAAGGTTTGGATGCACAATCACAAGAATTCTTTTTCTTCTAATTCTGCATCCACTGGAAATGCCTCTTCTCTAACACAGTAA

Coding sequence (CDS)

ATGGACGGAGAGAACTCCAACTATCATTACAGAGAATGCCTCCGGAACCATGCAGCCAGTCTGGGCAGTTACGCCACCGATGGCTGCGGCGAATTCACCCTCGACGACACCTCCTCTCCGACCAACAACCTCCACTGCGTTGCTTGCGGCTGCCACCGTAACTTCCACCGCAAAATCACTTACATCGCCGGCGGTGGCCGCTCTTCCGCCGCCACCGCAGACGATCTCATGGACTACGACCAAGCCGCAACCGATACCGAGAGGAGCGGCGGCGGAGGAAAAAAACGGTTCCGTACGAAGTTCACGGCGGATCAGAGAGAGAAGATGCTGGCATTTGCAGAGAAATTAGGTTGGAAATTGCAGAGAAGAGATCTTGACGACGAGATCGAGAGGTTCTGCCGGAGCGTGGGCGTCACTCGCCAGGTTTTCAAGGTTTGGATGCACAATCACAAGAATTCTTTTTCTTCTAATTCTGCATCCACTGGAAATGCCTCTTCTCTAACACAGTAA

Protein sequence

MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKITYIAGGGRSSAATADDLMDYDQAATDTERSGGGGKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Homology
[Close]
BLAST of CmaCh13G009700 vs. Swiss-Prot
Match: ZHD2_ARATH (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-34
Identity = 79/175 (45.14%), Postives = 96/175 (54.86%), Query Frame = 1 

Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKITYI 62
           G  +   YRECL+NHA ++G +A DGC EF         + L C ACGCHRNFHRK T  
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

Query: 63  AGGGRSSAAT-----------------ADDLMDY-------DQAATDTERSGGGGKKRFR 122
            GG      T                       Y       D+  T    S GG  KRFR
Sbjct: 102 IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFR 161

Query: 123 TKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNS 154
           TKFTA+Q+EKMLAFAE+LGW++Q+ D D  +E+FC   GV RQV K+WMHN+KNS
Sbjct: 162 TKFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]
BLAST of CmaCh13G009700 vs. Swiss-Prot
Match: ZHD11_ORYSJ (Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. japonica GN=ZHD11 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.2e-33
Identity = 81/183 (44.26%), Postives = 100/183 (54.64%), Query Frame = 1 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRK------ITYIA 69
           YREC+RNHAA LG+YA DGC E+T DD       L C ACGCHRNFHRK       T  A
Sbjct: 12  YRECMRNHAAKLGTYANDGCCEYTPDD--GHPAGLLCAACGCHRNFHRKDFLDGRATAAA 71

Query: 70  GGGRSSAATADDLMD----------YDQAATDTERSGG---------GGKKRFRTKFTAD 129
           GG   +      ++              AA      GG         GG++R RTKFT +
Sbjct: 72  GGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRTKFTEE 131

Query: 130 QREKMLAFAEKLGWKLQRRDL-----DDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSA 163
           Q+ +ML FAE+LGW++ +R+      DDE+ RFCR +GV RQVFKVWMHNHK        
Sbjct: 132 QKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHKAGGGGGGG 191

[Close]
BLAST of CmaCh13G009700 vs. Swiss-Prot
Match: ZHD11_ORYSI (Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. indica GN=ZHD11 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.2e-33
Identity = 81/183 (44.26%), Postives = 100/183 (54.64%), Query Frame = 1 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRK------ITYIA 69
           YREC+RNHAA LG+YA DGC E+T DD       L C ACGCHRNFHRK       T  A
Sbjct: 12  YRECMRNHAAKLGTYANDGCCEYTPDD--GHPAGLLCAACGCHRNFHRKDFLDGRATAAA 71

Query: 70  GGGRSSAATADDLMD----------YDQAATDTERSGG---------GGKKRFRTKFTAD 129
           GG   +      ++              AA      GG         GG++R RTKFT +
Sbjct: 72  GGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRTKFTEE 131

Query: 130 QREKMLAFAEKLGWKLQRRDL-----DDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSA 163
           Q+ +ML FAE+LGW++ +R+      DDE+ RFCR +GV RQVFKVWMHNHK        
Sbjct: 132 QKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHKAGGGGGGG 191

[Close]
BLAST of CmaCh13G009700 vs. Swiss-Prot
Match: ZHD1_ARATH (Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.8e-31
Identity = 74/187 (39.57%), Postives = 102/187 (54.55%), Query Frame = 1 

Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRK-ITY 62
           G  S + +RECL+N A ++G +A DGCGEF         + L C ACGCHRNFHRK + Y
Sbjct: 68  GGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPY 127

Query: 63  IAGGG---------------------RSSAATADDLM----------DYDQAATDTERSG 122
                                     R   + A  L             D   T +  +G
Sbjct: 128 FHHAPPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSSAEAG 187

Query: 123 GGGKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNH 158
           GG +KR RTKFTA+Q+E+MLA AE++GW++QR+D D+ I+RFC+  GV RQV KVW+HN+
Sbjct: 188 GGIRKRHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLHNN 247

[Close]
BLAST of CmaCh13G009700 vs. Swiss-Prot
Match: ZHD6_ARATH (Zinc-finger homeodomain protein 6 OS=Arabidopsis thaliana GN=ZHD6 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-30
Identity = 73/181 (40.33%), Postives = 99/181 (54.70%), Query Frame = 1 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRK----------- 69
           YREC +NHAAS G +  DGCGEF          +L C AC CHR+FHRK           
Sbjct: 82  YRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFN 141

Query: 70  ------------------ITYIAGGGRSSAATADDLMDYDQAATDTERSGGG-------- 129
                             +++  GGG ++ ++ +DL  + Q+      SG G        
Sbjct: 142 SFGHSQRPLGSRHVSPIMMSFGGGGGCAAESSTEDLNKFHQSF-----SGYGVDQFHHYQ 201

Query: 130 GKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKN 154
            KKRFRTKF  +Q+EKM+ FAEK+GW++ + + DDE+ RFCR + V RQVFKVWMHN+K 
Sbjct: 202 PKKRFRTKFNEEQKEKMMEFAEKIGWRMTKLE-DDEVNRFCREIKVKRQVFKVWMHNNKQ 256

[Close]
BLAST of CmaCh13G009700 vs. TrEMBL
Match: A0A0A0LQK4_CUCSA (Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus GN=Csa_1G043040 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 9.6e-85
Identity = 159/177 (89.83%), Postives = 164/177 (92.66%), Query Frame = 1 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHC ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATA--DDLMDYDQ------AATDTERSGGGGKKRFRTKFTADQREKMLAF 120
           YIAGGGRSSAATA  DDLMDYD+      AA DTERSGGG KKRFRTKFTADQ+EKMLAF
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAF 120

Query: 121 AEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 170
           AEKLGWKLQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 177

[Close]
BLAST of CmaCh13G009700 vs. TrEMBL
Match: A0A059AWK7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00572 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 5.3e-59
Identity = 127/190 (66.84%), Postives = 145/190 (76.32%), Query Frame = 1 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60
           M+G+N N  YRECLRNHAASLGSYATDGCGEFTLDDTS    +L C ACGCHRNFHRK+T
Sbjct: 1   MEGDNRNEAYRECLRNHAASLGSYATDGCGEFTLDDTSP--GSLQCAACGCHRNFHRKMT 60

Query: 61  YIAG------------GGRSSAATAD-DLMDYDQA-----ATDTERSGGGG---KKRFRT 120
           Y++             GGR +A     +L++Y +      A D+  SGGGG   KKRFRT
Sbjct: 61  YVSAHAGSGGLMVCRSGGRDNAELCGGELVEYGRGRQLNMAADSPESGGGGSGVKKRFRT 120

Query: 121 KFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSN-S 169
           KFT DQ+EKMLAFAEKLGWK+QR+D +DEIERFCRSVGV+RQVFKVWMHNHKNS SS+ S
Sbjct: 121 KFTTDQKEKMLAFAEKLGWKMQRKDEEDEIERFCRSVGVSRQVFKVWMHNHKNSSSSSTS 180

[Close]
BLAST of CmaCh13G009700 vs. TrEMBL
Match: M5WVJ3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011508mg PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 5.0e-57
Identity = 127/200 (63.50%), Postives = 139/200 (69.50%), Query Frame = 1 

Query: 4   ENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKITYIA 63
           +N+N  YRECLRNHAASLGSYATDGCGEFTLDD S     L C ACGCHRNFHR++TY A
Sbjct: 8   QNTNEVYRECLRNHAASLGSYATDGCGEFTLDDASP--GGLQCAACGCHRNFHRRVTYAA 67

Query: 64  -------GGGRSSA-------------------------ATADDLMDYDQAATDTERSGG 123
                  G GRSS                          AT D LMDY+     +  SG 
Sbjct: 68  TSSQAAGGSGRSSGHHHHHHNRVIMSSSSRGRDPSDNTIATQDQLMDYNAGGGGSPDSGD 127

Query: 124 --GGKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHN 169
              GKKRFRTKFTA+Q+EKMLAFAEKLGWKLQR+DL+DEIERFCRS+GV+RQVFKVWMHN
Sbjct: 128 RMSGKKRFRTKFTAEQKEKMLAFAEKLGWKLQRKDLEDEIERFCRSIGVSRQVFKVWMHN 187

[Close]
BLAST of CmaCh13G009700 vs. TrEMBL
Match: A0A072UBE0_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_6g073013 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.2e-56
Identity = 119/175 (68.00%), Postives = 137/175 (78.29%), Query Frame = 1 

Query: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDTS-SPTNNLHCVACGCHRNFHRKITYIA 64
           + NY YRECLRNHAASLGSYATDGCGEFT+DD+S S  N+L C ACGCHRNFHRKIT I 
Sbjct: 14  SQNYIYRECLRNHAASLGSYATDGCGEFTIDDSSPSAVNSLQCAACGCHRNFHRKITAIT 73

Query: 65  GGGRSSAATADDLMDYDQAATDTERSGGGG------KKRFRTKFTADQREKMLAFAEKLG 124
               ++AA +D +M+Y         SGGGG      +KR+RTKFT DQ+EKM+ FAEKLG
Sbjct: 74  RESAAAAAMSDQMMEY---------SGGGGSGSDGRRKRYRTKFTPDQKEKMMGFAEKLG 133

Query: 125 WKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSA--STGNA-SSLTQ 170
           WKLQR++LD+EIERFC SVGV+RQVFKVWMHNHKNS  SNS+  STGNA SSLTQ
Sbjct: 134 WKLQRKELDEEIERFCESVGVSRQVFKVWMHNHKNSCFSNSSDPSTGNANSSLTQ 179

[Close]
BLAST of CmaCh13G009700 vs. TrEMBL
Match: U5FLX4_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0015s05220g PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.2e-55
Identity = 114/185 (61.62%), Postives = 134/185 (72.43%), Query Frame = 1 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60
           M+ +N+N  Y+ECLRNHAASLGSYATDGCGEFTLDDTSSP + L C ACGCHRNFHRK+T
Sbjct: 1   MESDNTNDLYKECLRNHAASLGSYATDGCGEFTLDDTSSPYS-LQCAACGCHRNFHRKVT 60

Query: 61  YIAGGGR--------SSAATADDLMDYDQAATD---------TERSGGGGKKRFRTKFTA 120
           Y     R        SS     +++DY +   +          E     GKKR+RTKFT 
Sbjct: 61  YSNSSNRRDHIMHPPSSETVVMEMIDYAEGNNERDFRPPVMVVESGERSGKKRYRTKFTP 120

Query: 121 DQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGN 169
           +Q+EKML FAEKLGWKLQR+D +DE+E FCR +G++RQVFKVWMHNHKNS SS SASTGN
Sbjct: 121 EQKEKMLGFAEKLGWKLQRKDEEDEVESFCRGIGISRQVFKVWMHNHKNSSSSTSASTGN 180

[Close]
BLAST of CmaCh13G009700 vs. TAIR10
Match: AT4G24660.1 (AT4G24660.1 homeobox protein 22)

HSP 1 Score: 147.5 bits (371), Expect = 7.4e-36
Identity = 79/175 (45.14%), Postives = 96/175 (54.86%), Query Frame = 1 

Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKITYI 62
           G  +   YRECL+NHA ++G +A DGC EF         + L C ACGCHRNFHRK T  
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

Query: 63  AGGGRSSAAT-----------------ADDLMDY-------DQAATDTERSGGGGKKRFR 122
            GG      T                       Y       D+  T    S GG  KRFR
Sbjct: 102 IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFR 161

Query: 123 TKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNS 154
           TKFTA+Q+EKMLAFAE+LGW++Q+ D D  +E+FC   GV RQV K+WMHN+KNS
Sbjct: 162 TKFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]
BLAST of CmaCh13G009700 vs. TAIR10
Match: AT5G65410.1 (AT5G65410.1 homeobox protein 25)

HSP 1 Score: 134.8 bits (338), Expect = 4.9e-32
Identity = 74/187 (39.57%), Postives = 102/187 (54.55%), Query Frame = 1 

Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRK-ITY 62
           G  S + +RECL+N A ++G +A DGCGEF         + L C ACGCHRNFHRK + Y
Sbjct: 68  GGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPY 127

Query: 63  IAGGG---------------------RSSAATADDLM----------DYDQAATDTERSG 122
                                     R   + A  L             D   T +  +G
Sbjct: 128 FHHAPPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSSAEAG 187

Query: 123 GGGKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNH 158
           GG +KR RTKFTA+Q+E+MLA AE++GW++QR+D D+ I+RFC+  GV RQV KVW+HN+
Sbjct: 188 GGIRKRHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLHNN 247

[Close]
BLAST of CmaCh13G009700 vs. TAIR10
Match: AT2G18350.1 (AT2G18350.1 homeobox protein 24)

HSP 1 Score: 134.4 bits (337), Expect = 6.4e-32
Identity = 73/181 (40.33%), Postives = 99/181 (54.70%), Query Frame = 1 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRK----------- 69
           YREC +NHAAS G +  DGCGEF          +L C AC CHR+FHRK           
Sbjct: 82  YRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFN 141

Query: 70  ------------------ITYIAGGGRSSAATADDLMDYDQAATDTERSGGG-------- 129
                             +++  GGG ++ ++ +DL  + Q+      SG G        
Sbjct: 142 SFGHSQRPLGSRHVSPIMMSFGGGGGCAAESSTEDLNKFHQSF-----SGYGVDQFHHYQ 201

Query: 130 GKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKN 154
            KKRFRTKF  +Q+EKM+ FAEK+GW++ + + DDE+ RFCR + V RQVFKVWMHN+K 
Sbjct: 202 PKKRFRTKFNEEQKEKMMEFAEKIGWRMTKLE-DDEVNRFCREIKVKRQVFKVWMHNNKQ 256

[Close]
BLAST of CmaCh13G009700 vs. TAIR10
Match: AT3G50890.1 (AT3G50890.1 homeobox protein 28)

HSP 1 Score: 118.6 bits (296), Expect = 3.7e-27
Identity = 67/188 (35.64%), Postives = 93/188 (49.47%), Query Frame = 1 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKITY-------- 69
           YREC +NHAAS G +  DGC EF           L C AC CHR+FHRK  Y        
Sbjct: 60  YRECQKNHAASTGGHVVDGCCEFMAGGEEGTLGALKCAACNCHRSFHRKEVYGHRNSKQD 119

Query: 70  --------------------IAGGGRSSAATADDLMDYDQAATDTERSGGGG-------- 129
                               +   G     T+    D  +  +   ++  G         
Sbjct: 120 HQLMITPAFYSSNSSYKPRVMHPTGEIGRRTSSSSEDMKKILSHRNQNVDGKSLMMMMMR 179

Query: 130 -KKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKN 161
            KKR RTK   +Q+EKM  FAE+LGW++Q++D ++EI++FCR V + RQVFKVWMHN+K 
Sbjct: 180 KKKRVRTKINEEQKEKMKEFAERLGWRMQKKD-EEEIDKFCRMVNLRRQVFKVWMHNNKQ 239

[Close]
BLAST of CmaCh13G009700 vs. TAIR10
Match: AT5G15210.1 (AT5G15210.1 homeobox protein 30)

HSP 1 Score: 114.8 bits (286), Expect = 5.3e-26
Identity = 70/188 (37.23%), Postives = 96/188 (51.06%), Query Frame = 1 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDT--SSPTNNLHCVACGCHRNFHRKIT------- 69
           Y+ECL+NHAA +G +A DGCGEF    +  S+   +L C ACGCHRNFHR+         
Sbjct: 56  YKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAACGCHRNFHRREEDPSSLSA 115

Query: 70  ---------------------YIAG----GGRSSAATADDLMDYDQAATDTERSGGG--- 129
                                ++AG        SA+       Y   A    R G     
Sbjct: 116 IVPAIEFRPHNRHQLPPPPPPHLAGIRSPDDDDSASPPPISSSYMLLALSGGRGGANTAV 175

Query: 130 --GKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNH 159
              +KRFRTKF+  Q+EKM  F+E++GW++ + D D  ++ FCR +GV + VFKVWMHN+
Sbjct: 176 PMSRKRFRTKFSQYQKEKMFEFSERVGWRMPKAD-DVVVKEFCREIGVDKSVFKVWMHNN 235

[Close]
BLAST of CmaCh13G009700 vs. NCBI nr
Match: gi|449439493|ref|XP_004137520.1| (PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis sativus])

HSP 1 Score: 320.9 bits (821), Expect = 1.4e-84
Identity = 159/177 (89.83%), Postives = 164/177 (92.66%), Query Frame = 1 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHC ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATA--DDLMDYDQ------AATDTERSGGGGKKRFRTKFTADQREKMLAF 120
           YIAGGGRSSAATA  DDLMDYD+      AA DTERSGGG KKRFRTKFTADQ+EKMLAF
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAF 120

Query: 121 AEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 170
           AEKLGWKLQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 177

[Close]
BLAST of CmaCh13G009700 vs. NCBI nr
Match: gi|659066933|ref|XP_008467173.1| (PREDICTED: zinc-finger homeodomain protein 10-like [Cucumis melo])

HSP 1 Score: 312.4 bits (799), Expect = 4.9e-82
Identity = 159/179 (88.83%), Postives = 164/179 (91.62%), Query Frame = 1 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHC ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGG-RSSAATA--DDLMDYDQ------AATDTERSGGGG-KKRFRTKFTADQREKML 120
           YIAGGG RSSAATA  DDLMDYD+      AA DTERSGGGG KKRFRTKFT DQ+EKML
Sbjct: 61  YIAGGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGGSKKRFRTKFTVDQKEKML 120

Query: 121 AFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 170
           AFAEKLGWKLQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179

[Close]
BLAST of CmaCh13G009700 vs. NCBI nr
Match: gi|702433639|ref|XP_010069461.1| (PREDICTED: zinc-finger homeodomain protein 11-like [Eucalyptus grandis])

HSP 1 Score: 235.3 bits (599), Expect = 7.6e-59
Identity = 127/190 (66.84%), Postives = 145/190 (76.32%), Query Frame = 1 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60
           M+G+N N  YRECLRNHAASLGSYATDGCGEFTLDDTS    +L C ACGCHRNFHRK+T
Sbjct: 1   MEGDNRNEAYRECLRNHAASLGSYATDGCGEFTLDDTSP--GSLQCAACGCHRNFHRKMT 60

Query: 61  YIAG------------GGRSSAATAD-DLMDYDQA-----ATDTERSGGGG---KKRFRT 120
           Y++             GGR +A     +L++Y +      A D+  SGGGG   KKRFRT
Sbjct: 61  YVSAHAGSGGLMVCRSGGRDNAELCGGELVEYGRGRQLNMAADSPESGGGGSGVKKRFRT 120

Query: 121 KFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSN-S 169
           KFT DQ+EKMLAFAEKLGWK+QR+D +DEIERFCRSVGV+RQVFKVWMHNHKNS SS+ S
Sbjct: 121 KFTTDQKEKMLAFAEKLGWKMQRKDEEDEIERFCRSVGVSRQVFKVWMHNHKNSSSSSTS 180

[Close]
BLAST of CmaCh13G009700 vs. NCBI nr
Match: gi|595848831|ref|XP_007209606.1| (hypothetical protein PRUPE_ppa011508mg [Prunus persica])

HSP 1 Score: 228.8 bits (582), Expect = 7.1e-57
Identity = 127/200 (63.50%), Postives = 139/200 (69.50%), Query Frame = 1 

Query: 4   ENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKITYIA 63
           +N+N  YRECLRNHAASLGSYATDGCGEFTLDD S     L C ACGCHRNFHR++TY A
Sbjct: 8   QNTNEVYRECLRNHAASLGSYATDGCGEFTLDDASP--GGLQCAACGCHRNFHRRVTYAA 67

Query: 64  -------GGGRSSA-------------------------ATADDLMDYDQAATDTERSGG 123
                  G GRSS                          AT D LMDY+     +  SG 
Sbjct: 68  TSSQAAGGSGRSSGHHHHHHNRVIMSSSSRGRDPSDNTIATQDQLMDYNAGGGGSPDSGD 127

Query: 124 --GGKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHN 169
              GKKRFRTKFTA+Q+EKMLAFAEKLGWKLQR+DL+DEIERFCRS+GV+RQVFKVWMHN
Sbjct: 128 RMSGKKRFRTKFTAEQKEKMLAFAEKLGWKLQRKDLEDEIERFCRSIGVSRQVFKVWMHN 187

[Close]
BLAST of CmaCh13G009700 vs. NCBI nr
Match: gi|743878022|ref|XP_011035531.1| (PREDICTED: zinc-finger homeodomain protein 4-like [Populus euphratica])

HSP 1 Score: 226.9 bits (577), Expect = 2.7e-56
Identity = 116/185 (62.70%), Postives = 134/185 (72.43%), Query Frame = 1 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60
           M+ +N+N  Y+ECLRNHAASLGSYATDGCGEFTLDDTSSP + L C ACGCHRNFHRK+T
Sbjct: 1   MESDNTNDLYKECLRNHAASLGSYATDGCGEFTLDDTSSPYS-LQCAACGCHRNFHRKVT 60

Query: 61  YIAGGGR--------SSAATADDLMDYDQAATD---------TERSGGGGKKRFRTKFTA 120
           Y     R        SS     D++DY +   +          E     GKKR RTKFT 
Sbjct: 61  YSNSSNRRDHIMHPPSSETVVMDMIDYAEGNNERDFRPPVMVVESGDRSGKKRHRTKFTP 120

Query: 121 DQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGN 169
           +Q+EKML FAEKLGWKLQR+D +DE+ERFCR +G++RQVFKVWMHNHKNS SS SASTGN
Sbjct: 121 EQKEKMLGFAEKLGWKLQRKDEEDEVERFCRGIGISRQVFKVWMHNHKNSSSSTSASTGN 180

The following BLAST results are available for this feature:
BLAST of CmaCh13G009700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZHD2_ARATH1.3e-3445.14Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1[more]
ZHD11_ORYSJ3.2e-3344.26Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. japonica GN=ZHD11 PE=3... [more]
ZHD11_ORYSI3.2e-3344.26Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. indica GN=ZHD11 PE=3 S... [more]
ZHD1_ARATH8.8e-3139.57Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1[more]
ZHD6_ARATH1.1e-3040.33Zinc-finger homeodomain protein 6 OS=Arabidopsis thaliana GN=ZHD6 PE=1 SV=1[more]
BLAST of CmaCh13G009700 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQK4_CUCSA9.6e-8589.83Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus GN=Csa_1G043040 PE=4 ... [more]
A0A059AWK7_EUCGR5.3e-5966.84Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00572 PE=4 SV=1[more]
M5WVJ3_PRUPE5.0e-5763.50Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011508mg PE=4 SV=1[more]
A0A072UBE0_MEDTR3.2e-5668.00Uncharacterized protein OS=Medicago truncatula GN=MTR_6g073013 PE=4 SV=1[more]
U5FLX4_POPTR1.2e-5561.62Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0015s05220g P... [more]
BLAST of CmaCh13G009700 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24660.17.4e-3645.14 homeobox protein 22[more]
AT5G65410.14.9e-3239.57 homeobox protein 25[more]
AT2G18350.16.4e-3240.33 homeobox protein 24[more]
AT3G50890.13.7e-2735.64 homeobox protein 28[more]
AT5G15210.15.3e-2637.23 homeobox protein 30[more]
BLAST of CmaCh13G009700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449439493|ref|XP_004137520.1|1.4e-8489.83PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis sativus][more]
gi|659066933|ref|XP_008467173.1|4.9e-8288.83PREDICTED: zinc-finger homeodomain protein 10-like [Cucumis melo][more]
gi|702433639|ref|XP_010069461.1|7.6e-5966.84PREDICTED: zinc-finger homeodomain protein 11-like [Eucalyptus grandis][more]
gi|595848831|ref|XP_007209606.1|7.1e-5763.50hypothetical protein PRUPE_ppa011508mg [Prunus persica][more]
gi|743878022|ref|XP_011035531.1|2.7e-5662.70PREDICTED: zinc-finger homeodomain protein 4-like [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006455Homeodomain_ZF_HD
IPR006456ZF_HD_homeobox_Cys/His_dimer
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh13G009700.1CmaCh13G009700.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006455Homeodomain, ZF-HD classTIGRFAMsTIGR01565TIGR01565coord: 94..152
score: 9.2
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPRODOMPD125774coord: 10..58
score: 2.0
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPFAMPF04770ZF-HD_dimercoord: 8..58
score: 9.1
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainTIGRFAMsTIGR01566TIGR01566coord: 9..58
score: 2.2
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPROFILEPS51523ZF_HD_DIMERcoord: 10..59
score: 23
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 82..155
score: 7.7
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 85..153
score: 5.73
NoneNo IPR availablePANTHERPTHR31948FAMILY NOT NAMEDcoord: 4..169
score: 3.8
NoneNo IPR availablePANTHERPTHR31948:SF16ZINC-FINGER HOMEODOMAIN PROTEIN 14coord: 4..169
score: 3.8