Carg04869 (gene) Silver-seed gourd

Overview
NameCarg04869
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionZinc finger homeodomain protein
LocationCucurbita_argyrosperma_scaffold_028 : 1397067 .. 1397576 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGGAGAGAACTCCAACTATCATTACAGAGAATGCCTCCGGAACCATGCAGCCAGTCTGGGCAGTTACGCCACCGATGGCTGCGGCGAATTCACCCTCGACGACACCTCCTCTCCGACCAACAACCTCCACTGCGTCGCTTGCGGCTGCCACCGTAACTTCCACCGCAAAATCACTTACATCGCTGGCGGTGGCCGCTCTTCCGCCGCCACTGCAGACGATCTCATGGACTACGACCAAGCCGCAACCGACACCGAGAGGAGCGGCGGCGGAGGAAAAAAACGGTTCCGTACGAAGTTCACGGCGGATCAGAGAGAGAAGATGCTGGCATTTGCAGAGAAATTAGGTTGGAAATTGCAGAGAAGAGATCTTGACGACGAGATCGAGAGGTTCTGCCGGAGCGTGGGCGTCACTCGCCAGGTTTTCAAGGTTTGGATGCACAATCACAAGAATTCTTTTTCTTCTAATTCTGCATCCACTGGAAATGCTTCTTCTCTAACACAGTAA

mRNA sequence

ATGGACGGAGAGAACTCCAACTATCATTACAGAGAATGCCTCCGGAACCATGCAGCCAGTCTGGGCAGTTACGCCACCGATGGCTGCGGCGAATTCACCCTCGACGACACCTCCTCTCCGACCAACAACCTCCACTGCGTCGCTTGCGGCTGCCACCGTAACTTCCACCGCAAAATCACTTACATCGCTGGCGGTGGCCGCTCTTCCGCCGCCACTGCAGACGATCTCATGGACTACGACCAAGCCGCAACCGACACCGAGAGGAGCGGCGGCGGAGGAAAAAAACGGTTCCGTACGAAGTTCACGGCGGATCAGAGAGAGAAGATGCTGGCATTTGCAGAGAAATTAGGTTGGAAATTGCAGAGAAGAGATCTTGACGACGAGATCGAGAGGTTCTGCCGGAGCGTGGGCGTCACTCGCCAGGTTTTCAAGGTTTGGATGCACAATCACAAGAATTCTTTTTCTTCTAATTCTGCATCCACTGGAAATGCTTCTTCTCTAACACAGTAA

Coding sequence (CDS)

ATGGACGGAGAGAACTCCAACTATCATTACAGAGAATGCCTCCGGAACCATGCAGCCAGTCTGGGCAGTTACGCCACCGATGGCTGCGGCGAATTCACCCTCGACGACACCTCCTCTCCGACCAACAACCTCCACTGCGTCGCTTGCGGCTGCCACCGTAACTTCCACCGCAAAATCACTTACATCGCTGGCGGTGGCCGCTCTTCCGCCGCCACTGCAGACGATCTCATGGACTACGACCAAGCCGCAACCGACACCGAGAGGAGCGGCGGCGGAGGAAAAAAACGGTTCCGTACGAAGTTCACGGCGGATCAGAGAGAGAAGATGCTGGCATTTGCAGAGAAATTAGGTTGGAAATTGCAGAGAAGAGATCTTGACGACGAGATCGAGAGGTTCTGCCGGAGCGTGGGCGTCACTCGCCAGGTTTTCAAGGTTTGGATGCACAATCACAAGAATTCTTTTTCTTCTAATTCTGCATCCACTGGAAATGCTTCTTCTCTAACACAGTAA

Protein sequence

MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKITYIAGGGRSSAATADDLMDYDQAATDTERSGGGGKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Homology
[Close]
BLAST of Carg04869 vs. NCBI nr
Match: XP_022924045.1 (zinc-finger homeodomain protein 8-like [Cucurbita moschata] >XP_023001812.1 zinc-finger homeodomain protein 8-like [Cucurbita maxima] >XP_023519958.1 zinc-finger homeodomain protein 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.4 bits (895), Expect = 7.0e-93
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60

Query: 61  YIAGGGRSSAATADDLMDYDQAATDTERSGGGGKKRFRTKFTADQREKMLAFAEKLGWKL 120
           YIAGGGRSSAATADDLMDYDQAATDTERSGGGGKKRFRTKFTADQREKMLAFAEKLGWKL
Sbjct: 61  YIAGGGRSSAATADDLMDYDQAATDTERSGGGGKKRFRTKFTADQREKMLAFAEKLGWKL 120

Query: 121 QRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 170
           QRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 QRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 169

[Close]
BLAST of Carg04869 vs. NCBI nr
Match: XP_004137520.1 (PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis sativus] >KGN64200.1 Zinc finger homeodomain protein SZF-HD1 [Cucumis sativus])

HSP 1 Score: 308.9 bits (790), Expect = 1.1e-80
Identity = 153/177 (86.44%), Postives = 158/177 (89.27%), Query Frame = 0 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHC ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATA--DDLMDYDQ------AATDTERSGGGGKKRFRTKFTADQREKMLAF 120
           YIAGGGR        DDLMDYD+      AA DTERSGGG KKRFRTKFTADQ+EKMLAF
Sbjct: 61  YIAGGGRXXXXXXXDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAF 120

Query: 121 AEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 170
           AEKLGWKLQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 177

[Close]
BLAST of Carg04869 vs. NCBI nr
Match: XP_023542338.1 (zinc-finger homeodomain protein 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.0 bits (733), Expect = 4.3e-74
Identity = 141/176 (80.11%), Postives = 154/176 (87.50%), Query Frame = 0 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60
           MDGENS+YHYRECLRNHAA+LGSYATDGCGEFTLDDTSSP N L+C AC CHRNFHRK+T
Sbjct: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACSCHRNFHRKVT 60

Query: 61  YIAGGGR--SSAATADDLMDYDQ------AATDTERSGGGGKKRFRTKFTADQREKMLAF 120
           YI GGGR  S+A TAD+LMDYD+      AA DT    GG KKRFRTKFT DQ+EKMLAF
Sbjct: 61  YIGGGGRFSSAAPTADNLMDYDRHAIVEYAAADT----GGSKKRFRTKFTTDQKEKMLAF 120

Query: 121 AEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLT 169
           AE+LGWKLQR+DLD+EIERFCRSVG+TRQVFKVWMHNHKNSFSSNSASTGN SS+T
Sbjct: 121 AERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVT 172

[Close]
BLAST of Carg04869 vs. NCBI nr
Match: XP_022994948.1 (zinc-finger homeodomain protein 10-like [Cucurbita maxima])

HSP 1 Score: 286.6 bits (732), Expect = 5.6e-74
Identity = 141/176 (80.11%), Postives = 154/176 (87.50%), Query Frame = 0 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60
           MDGENS+YHYRECLRNHAA+LGSYATDGCGEFTLDDTSSP N L+C AC CHRNFHRK+T
Sbjct: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVT 60

Query: 61  YIAGGGR--SSAATADDLMDYDQ------AATDTERSGGGGKKRFRTKFTADQREKMLAF 120
           YI G GR  S+A TAD+LMDYD+      AATDT    GG KKRFRTKFT DQ+EKMLAF
Sbjct: 61  YIGGSGRFSSAAPTADNLMDYDRHAIVEYAATDT----GGSKKRFRTKFTTDQKEKMLAF 120

Query: 121 AEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLT 169
           AE+LGWKLQR+DLD+EIERFCRSVG+TRQVFKVWMHNHKNSFSSNSASTGN SS+T
Sbjct: 121 AERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVT 172

[Close]
BLAST of Carg04869 vs. NCBI nr
Match: XP_022954731.1 (zinc-finger homeodomain protein 10-like [Cucurbita moschata])

HSP 1 Score: 273.5 bits (698), Expect = 4.9e-70
Identity = 136/178 (76.40%), Postives = 150/178 (84.27%), Query Frame = 0 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60
           MDGENS+YHYRECLRNHAA+LGSYATDGCGEFTLDDTSSP N L+C AC CHRNFHRK+T
Sbjct: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPGNQLYCAACSCHRNFHRKVT 60

Query: 61  YIAGGG----RSSAATADDLMDYDQ------AATDTERSGGGGKKRFRTKFTADQREKML 120
           YI         S+A TAD+LMDY++      AA DT    GG KKRFRTKFT DQ+EKML
Sbjct: 61  YIGXXXXXXFSSAAPTADNLMDYERHAIVEYAAADT----GGSKKRFRTKFTTDQKEKML 120

Query: 121 AFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLT 169
           AFAE+LGWKLQR+DLD+EIERFCRSVG+TRQVFKVWMHNHKNSFSSNSASTGN SS+T
Sbjct: 121 AFAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVT 174

[Close]
BLAST of Carg04869 vs. TAIR10
Match: AT4G24660.1 (homeobox protein 22)

HSP 1 Score: 135.2 bits (339), Expect = 3.8e-32
Identity = 75/180 (41.67%), Postives = 94/180 (52.22%), Query Frame = 0 

Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKITYI 62
           G  +   YRECL+NHA ++G +A DGC EF         + L C ACGCHRNFHRK T  
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

Query: 63  AGGGRSSAATADDLMDYDQAATDTERSG-----------------------------GGG 122
            GG      T      Y++     +  G                                
Sbjct: 102 IGGRAHRVPTY-----YNRPPQPHQPPGYLHLTSPAAPYRPXXXXXXXXXXXXXXXXXXX 161

Query: 123 KKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNS 154
            KRFRTKFTA+Q+EKMLAFAE+LGW++Q+ D D  +E+FC   GV RQV K+WMHN+KNS
Sbjct: 162 XKRFRTKFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]
BLAST of Carg04869 vs. TAIR10
Match: AT2G18350.1 (homeobox protein 24)

HSP 1 Score: 128.6 bits (322), Expect = 3.5e-30
Identity = 75/181 (41.44%), Postives = 95/181 (52.49%), Query Frame = 0 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRK----------- 69
           YREC +NHAAS G +  DGCGEF          +L C AC CHR+FHRK           
Sbjct: 82  YRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFN 141

Query: 70  ----------------ITYIAGGGRSSAA--TADDLMDYDQAATDTERSGGG-------- 129
                           I    GG    AA  + +DL  + Q+      SG G        
Sbjct: 142 SFGHSQRPLGSRHVSPIMMSFGGXXXCAAESSTEDLNKFHQSF-----SGYGVDQFHHYQ 201

Query: 130 GKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKN 154
            KKRFRTKF  +Q+EKM+ FAEK+GW++ + + DDE+ RFCR + V RQVFKVWMHN+K 
Sbjct: 202 PKKRFRTKFNEEQKEKMMEFAEKIGWRMTKLE-DDEVNRFCREIKVKRQVFKVWMHNNKQ 256

[Close]
BLAST of Carg04869 vs. TAIR10
Match: AT1G14440.1 (homeobox protein 31)

HSP 1 Score: 127.5 bits (319), Expect = 7.9e-30
Identity = 75/193 (38.86%), Postives = 99/193 (51.30%), Query Frame = 0 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT--YIAGGGR 69
           Y+ECL+NHAA++G  ATDGCGEF           L C AC CHRNFHRK     +A    
Sbjct: 90  YKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRKEVEGELAATAM 149

Query: 70  S---------------------------------------SAATADDLMDYDQAATDTER 129
           S                                       + + ++D M+ D   T +  
Sbjct: 150 SPYHQHPPHRKLMLNHQKIRSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTASRS 209

Query: 130 SGG---GGKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKV 159
                   KKRFRTKFT +Q+EKML+FAEK+GWK+QR++ D  ++RFC  +GV R+V KV
Sbjct: 210 LPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQE-DCVVQRFCEEIGVKRRVLKV 269

[Close]
BLAST of Carg04869 vs. TAIR10
Match: AT5G65410.1 (homeobox protein 25)

HSP 1 Score: 127.1 bits (318), Expect = 1.0e-29
Identity = 67/182 (36.81%), Postives = 93/182 (51.10%), Query Frame = 0 

Query: 8   YHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRK--------- 67
           + +RECL+N A ++G +A DGCGEF         + L C ACGCHRNFHRK         
Sbjct: 73  FRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPYXXXXX 132

Query: 68  -----------------------ITYIAGGGRSSAATADDLMDYDQAATDTERSGGGGKK 127
                                                           T +  +GGG +K
Sbjct: 133 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMETSSAEAGGGIRK 192

Query: 128 RFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFS 158
           R RTKFTA+Q+E+MLA AE++GW++QR+D D+ I+RFC+  GV RQV KVW+HN+K++  
Sbjct: 193 RHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLHNNKHTLG 252

[Close]
BLAST of Carg04869 vs. TAIR10
Match: AT3G28920.1 (homeobox protein 34)

HSP 1 Score: 122.1 bits (305), Expect = 3.3e-28
Identity = 76/212 (35.85%), Postives = 104/212 (49.06%), Query Frame = 0 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDTSSPTN--NLHCVACGCHRNFHR---------- 69
           Y+ECL+NHAA++G +A DGCGEF    +S+P++  +L C ACGCHRNFHR          
Sbjct: 52  YKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRXXXXXXXXXX 111

Query: 70  ----------------------------------------------KITYIAGGGRSSAA 129
                                                                      A
Sbjct: 112 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTA 171

Query: 130 TADDLMDYDQAATDTERSGGGGKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIER 162
              DL     AA +   +  G +KRFRTKF+++Q+EKM  FA+++GWK+Q+RD +DE+  
Sbjct: 172 PFSDL--NFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRD-EDEVRD 231

[Close]
BLAST of Carg04869 vs. Swiss-Prot
Match: sp|Q9SB61|ZHD2_ARATH (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.8e-31
Identity = 75/180 (41.67%), Postives = 94/180 (52.22%), Query Frame = 0 

Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKITYI 62
           G  +   YRECL+NHA ++G +A DGC EF         + L C ACGCHRNFHRK T  
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

Query: 63  AGGGRSSAATADDLMDYDQAATDTERSG-----------------------------GGG 122
            GG      T      Y++     +  G                                
Sbjct: 102 IGGRAHRVPTY-----YNRPPQPHQPPGYLHLTSPAAPYRPXXXXXXXXXXXXXXXXXXX 161

Query: 123 KKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNS 154
            KRFRTKFTA+Q+EKMLAFAE+LGW++Q+ D D  +E+FC   GV RQV K+WMHN+KNS
Sbjct: 162 XKRFRTKFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]
BLAST of Carg04869 vs. Swiss-Prot
Match: sp|Q9ZPW7|ZHD6_ARATH (Zinc-finger homeodomain protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZHD6 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.4e-29
Identity = 75/181 (41.44%), Postives = 95/181 (52.49%), Query Frame = 0 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRK----------- 69
           YREC +NHAAS G +  DGCGEF          +L C AC CHR+FHRK           
Sbjct: 82  YRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFN 141

Query: 70  ----------------ITYIAGGGRSSAA--TADDLMDYDQAATDTERSGGG-------- 129
                           I    GG    AA  + +DL  + Q+      SG G        
Sbjct: 142 SFGHSQRPLGSRHVSPIMMSFGGXXXCAAESSTEDLNKFHQSF-----SGYGVDQFHHYQ 201

Query: 130 GKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKN 154
            KKRFRTKF  +Q+EKM+ FAEK+GW++ + + DDE+ RFCR + V RQVFKVWMHN+K 
Sbjct: 202 PKKRFRTKFNEEQKEKMMEFAEKIGWRMTKLE-DDEVNRFCREIKVKRQVFKVWMHNNKQ 256

[Close]
BLAST of Carg04869 vs. Swiss-Prot
Match: sp|Q9M9S0|ZHD4_ARATH (Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZHD4 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-28
Identity = 75/193 (38.86%), Postives = 99/193 (51.30%), Query Frame = 0 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT--YIAGGGR 69
           Y+ECL+NHAA++G  ATDGCGEF           L C AC CHRNFHRK     +A    
Sbjct: 90  YKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRKEVEGELAATAM 149

Query: 70  S---------------------------------------SAATADDLMDYDQAATDTER 129
           S                                       + + ++D M+ D   T +  
Sbjct: 150 SPYHQHPPHRKLMLNHQKIRSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTASRS 209

Query: 130 SGG---GGKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKV 159
                   KKRFRTKFT +Q+EKML+FAEK+GWK+QR++ D  ++RFC  +GV R+V KV
Sbjct: 210 LPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQE-DCVVQRFCEEIGVKRRVLKV 269

[Close]
BLAST of Carg04869 vs. Swiss-Prot
Match: sp|Q9FKP8|ZHD1_ARATH (Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-28
Identity = 67/182 (36.81%), Postives = 93/182 (51.10%), Query Frame = 0 

Query: 8   YHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRK--------- 67
           + +RECL+N A ++G +A DGCGEF         + L C ACGCHRNFHRK         
Sbjct: 73  FRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPYXXXXX 132

Query: 68  -----------------------ITYIAGGGRSSAATADDLMDYDQAATDTERSGGGGKK 127
                                                           T +  +GGG +K
Sbjct: 133 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMETSSAEAGGGIRK 192

Query: 128 RFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFS 158
           R RTKFTA+Q+E+MLA AE++GW++QR+D D+ I+RFC+  GV RQV KVW+HN+K++  
Sbjct: 193 RHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLHNNKHTLG 252

[Close]
BLAST of Carg04869 vs. Swiss-Prot
Match: sp|Q9LHF0|ZHD9_ARATH (Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 6.0e-27
Identity = 76/212 (35.85%), Postives = 104/212 (49.06%), Query Frame = 0 

Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDTSSPTN--NLHCVACGCHRNFHR---------- 69
           Y+ECL+NHAA++G +A DGCGEF    +S+P++  +L C ACGCHRNFHR          
Sbjct: 52  YKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRXXXXXXXXXX 111

Query: 70  ----------------------------------------------KITYIAGGGRSSAA 129
                                                                      A
Sbjct: 112 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTA 171

Query: 130 TADDLMDYDQAATDTERSGGGGKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIER 162
              DL     AA +   +  G +KRFRTKF+++Q+EKM  FA+++GWK+Q+RD +DE+  
Sbjct: 172 PFSDL--NFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRD-EDEVRD 231

[Close]
BLAST of Carg04869 vs. TrEMBL
Match: tr|A0A0A0LQK4|A0A0A0LQK4_CUCSA (Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G043040 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 7.0e-81
Identity = 153/177 (86.44%), Postives = 158/177 (89.27%), Query Frame = 0 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHC ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATA--DDLMDYDQ------AATDTERSGGGGKKRFRTKFTADQREKMLAF 120
           YIAGGGR        DDLMDYD+      AA DTERSGGG KKRFRTKFTADQ+EKMLAF
Sbjct: 61  YIAGGGRXXXXXXXDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKMLAF 120

Query: 121 AEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 170
           AEKLGWKLQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 AEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 177

[Close]
BLAST of Carg04869 vs. TrEMBL
Match: tr|A0A1S3CU70|A0A1S3CU70_CUCME (zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.1e-62
Identity = 127/179 (70.95%), Postives = 131/179 (73.18%), Query Frame = 0 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHC ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YI----------AGGGRSSAATADDLMDYDQAATDTERSGGGGKKRFRTKFTADQREKML 120
           YI                                            FRTKFT DQ+EKML
Sbjct: 61  YIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRTKFTVDQKEKML 120

Query: 121 AFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 170
           AFAEKLGWKLQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179

[Close]
BLAST of Carg04869 vs. TrEMBL
Match: tr|A0A2N9I0P1|A0A2N9I0P1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45303 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.3e-58
Identity = 124/179 (69.27%), Postives = 138/179 (77.09%), Query Frame = 0 

Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60
           M+ EN+N  YRECLRNHAASLGSYATDGCGEFTLD+TS    +L C ACGCHRNFHRK+T
Sbjct: 1   MEAENTNDIYRECLRNHAASLGSYATDGCGEFTLDNTS--PGSLQCAACGCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATADDLMDYDQAATDTE---RSGGGG-------KKRFRTKFTADQREKML 120
           Y+   GR    +       +Q  T TE    SGGGG       KKRFRTKFT DQ+EKML
Sbjct: 61  YVPPHGRGVVVSCSS-RGQEQETTXTELMDYSGGGGDMADRSNKKRFRTKFTPDQKEKML 120

Query: 121 AFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 170
           AFAEKLGWKLQR+DL+DEIERFCR VGV+RQVFKVWMHNHKN  S++SASTGNASSLTQ
Sbjct: 121 AFAEKLGWKLQRKDLEDEIERFCRGVGVSRQVFKVWMHNHKNLNSASSASTGNASSLTQ 176

[Close]
BLAST of Carg04869 vs. TrEMBL
Match: tr|A0A2I4EVI3|A0A2I4EVI3_9ROSI (zinc-finger homeodomain protein 11-like OS=Juglans regia OX=51240 GN=LOC108993100 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.3e-55
Identity = 120/183 (65.57%), Postives = 131/183 (71.58%), Query Frame = 0 

Query: 6   SNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKITYI--- 65
           +N  YRECLRNHAASLGSYATDGCGEFTLDD+S     L C ACGCHRNFHRK+TY+   
Sbjct: 12  ANDVYRECLRNHAASLGSYATDGCGEFTLDDSS--PGCLQCAACGCHRNFHRKVTYVPTH 71

Query: 66  ---------AGGGRSSAATADDLMDYDQAATDTERSGGG-------GKKRFRTKFTADQR 125
                    + GGR    T  +LMDY            G        KKRFRTKFT DQ+
Sbjct: 72  VRGGGASYSSRGGREVPETTAELMDYTGGGRQAVMVESGEAAERNFSKKRFRTKFTQDQK 131

Query: 126 EKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASS 170
           EKMLAFAEKL WKLQR+DLDDEIERFCR VGV+RQVFKVWMHNHKN+ SS+SASTGNASS
Sbjct: 132 EKMLAFAEKLEWKLQRKDLDDEIERFCRGVGVSRQVFKVWMHNHKNASSSSSASTGNASS 191

[Close]
BLAST of Carg04869 vs. TrEMBL
Match: tr|M5WVJ3|M5WVJ3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G239000 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.9e-54
Identity = 123/200 (61.50%), Postives = 137/200 (68.50%), Query Frame = 0 

Query: 4   ENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKITY-- 63
           +N+N  YRECLRNHAASLGSYATDGCGEFTLDD S     L C ACGCHRNFHR++TY  
Sbjct: 8   QNTNEVYRECLRNHAASLGSYATDGCGEFTLDDAS--PGGLQCAACGCHRNFHRRVTYXX 67

Query: 64  --------------------------IAGGGR----SSAATADDLMDYDQAATDTERSGG 123
                                         GR    ++ AT D LMDY+     +  SG 
Sbjct: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDPSDNTIATQDQLMDYNAGGGGSPDSGD 127

Query: 124 --GGKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHN 169
              GKKRFRTKFTA+Q+EKMLAFAEKLGWKLQR+DL+DEIERFCRS+GV+RQVFKVWMHN
Sbjct: 128 RMSGKKRFRTKFTAEQKEKMLAFAEKLGWKLQRKDLEDEIERFCRSIGVSRQVFKVWMHN 187

The following BLAST results are available for this feature:
BLAST of Carg04869 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022924045.17.0e-93100.00zinc-finger homeodomain protein 8-like [Cucurbita moschata] >XP_023001812.1 zinc... [more]
XP_004137520.11.1e-8086.44PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis sativus] >KGN64200.1 ... [more]
XP_023542338.14.3e-7480.11zinc-finger homeodomain protein 5-like [Cucurbita pepo subsp. pepo][more]
XP_022994948.15.6e-7480.11zinc-finger homeodomain protein 10-like [Cucurbita maxima][more]
XP_022954731.14.9e-7076.40zinc-finger homeodomain protein 10-like [Cucurbita moschata][more]
BLAST of Carg04869 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24660.13.8e-3241.67homeobox protein 22[more]
AT2G18350.13.5e-3041.44homeobox protein 24[more]
AT1G14440.17.9e-3038.86homeobox protein 31[more]
AT5G65410.11.0e-2936.81homeobox protein 25[more]
AT3G28920.13.3e-2835.85homeobox protein 34[more]
BLAST of Carg04869 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SB61|ZHD2_ARATH6.8e-3141.67Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S... [more]
sp|Q9ZPW7|ZHD6_ARATH6.4e-2941.44Zinc-finger homeodomain protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZHD6 PE=1 S... [more]
sp|Q9M9S0|ZHD4_ARATH1.4e-2838.86Zinc-finger homeodomain protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZHD4 PE=1 S... [more]
sp|Q9FKP8|ZHD1_ARATH1.9e-2836.81Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S... [more]
sp|Q9LHF0|ZHD9_ARATH6.0e-2735.85Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 S... [more]
BLAST of Carg04869 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LQK4|A0A0A0LQK4_CUCSA7.0e-8186.44Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G0430... [more]
tr|A0A1S3CU70|A0A1S3CU70_CUCME1.1e-6270.95zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 P... [more]
tr|A0A2N9I0P1|A0A2N9I0P1_FAGSY1.3e-5869.27Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45303 PE=4 SV=1[more]
tr|A0A2I4EVI3|A0A2I4EVI3_9ROSI2.3e-5565.57zinc-finger homeodomain protein 11-like OS=Juglans regia OX=51240 GN=LOC10899310... [more]
tr|M5WVJ3|M5WVJ3_PRUPE1.9e-5461.50Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G239000 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR006456ZF_HD_homeobox_Cys/His_dimer
IPR006455Homeodomain_ZF_HD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04869-RACarg04869-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 80..158
e-value: 1.1E-32
score: 113.8
NoneNo IPR availablePANTHERPTHR31948FAMILY NOT NAMEDcoord: 6..163
NoneNo IPR availablePANTHERPTHR31948:SF16ZINC-FINGER HOMEODOMAIN PROTEIN 13-RELATEDcoord: 6..163
IPR006455Homeodomain, ZF-HD classTIGRFAMTIGR01565TIGR01565coord: 94..152
e-value: 9.2E-29
score: 97.2
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainTIGRFAMTIGR01566TIGR01566coord: 9..58
e-value: 2.2E-22
score: 77.2
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPFAMPF04770ZF-HD_dimercoord: 8..58
e-value: 9.3E-24
score: 83.4
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPRODOMPD125774coord: 10..58
e-value: 2.0E-17
score: 216.0
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPROSITEPS51523ZF_HD_DIMERcoord: 10..59
score: 23.148
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 85..153