CmaCh18G000770 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G000770
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_2
Location	Cma_Chr18 : 336760 .. 337604 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAATTTTCATCTCTCTCCTCCATTTCCAAATCCTTAAATCCTTTCTCTCTCTTCTTCTTTGTTTTTATTTCTAATTCAAATTTCAGTCTCTGCTTCTCTACACCCACAGAGAGCAAAGGAAATGTTGAATCCGGCGAACGATCTGTTCTCGACGCCGTCTTCTCCGACGAATTCATTCATTTCCTCCTCCGATCTCGACACTGAGGTGCCCATCATCGCCTTCTCCCATTTTATGATTATCTTATCCGTTTCTTTATTTTCGGAATTCAATTCTGTTTTGCAGTCTACAGGTTCCTTCTTCCATGACAGGAGCACCAGCTTGGGGACTTTAATGGGGGTGAGCTTCCCTGCGATTGCCTTCCGAGTCTCCTCCCAGAGCCGAGGCCACCACGCCGCTGCGGCGGCGACAGCTGACGTTTCCCGCAAGAGCAAAAAGCCAAAGAGAAAAACGACGACGGCGCCGGGGCTAGTCTCTGATCGGAAGCGGAAGTGGTGGCAGCTGTGCAGGGACGACGGTGTTAAACCGGCATCTCTGGGTGACTTTCTTGAGGTGGAACGGAGATTTGGGGATGGTGCTTTTTACGGCAATGCGGTGGATCTAGAAGGCGTGGTTACGGCGGATCAACGGAGGAGTGGTCGGAATTTGTTCGCCGACGGGAGAGTTCTTCCGCCTGCGCCAACGGAGGAAGAAGCATCGGCAGGCGCGGCTCTCCGCCGATTTTCATTATCGCTCACCGGAATTTGCAGCGGCGGTGCCGGCTAAAATTTGGGATTTGATTTGTCCTGTTTATTTAAATATAATATATTACATTTAATCAATCAAATGGTTTAATTATTACTATG

mRNA sequence

TTCAATTTTCATCTCTCTCCTCCATTTCCAAATCCTTAAATCCTTTCTCTCTCTTCTTCTTTGTTTTTATTTCTAATTCAAATTTCAGTCTCTGCTTCTCTACACCCACAGAGAGCAAAGGAAATGTTGAATCCGGCGAACGATCTGTTCTCGACGCCGTCTTCTCCGACGAATTCATTCATTTCCTCCTCCGATCTCGACACTGAGTCTACAGGTTCCTTCTTCCATGACAGGAGCACCAGCTTGGGGACTTTAATGGGGGTGAGCTTCCCTGCGATTGCCTTCCGAGTCTCCTCCCAGAGCCGAGGCCACCACGCCGCTGCGGCGGCGACAGCTGACGTTTCCCGCAAGAGCAAAAAGCCAAAGAGAAAAACGACGACGGCGCCGGGGCTAGTCTCTGATCGGAAGCGGAAGTGGTGGCAGCTGTGCAGGGACGACGGTGTTAAACCGGCATCTCTGGGTGACTTTCTTGAGGTGGAACGGAGATTTGGGGATGGTGCTTTTTACGGCAATGCGGTGGATCTAGAAGGCGTGGTTACGGCGGATCAACGGAGGAGTGGTCGGAATTTGTTCGCCGACGGGAGAGTTCTTCCGCCTGCGCCAACGGAGGAAGAAGCATCGGCAGGCGCGGCTCTCCGCCGATTTTCATTATCGCTCACCGGAATTTGCAGCGGCGGTGCCGGCTAAAATTTGGGATTTGATTTGTCCTGTTTATTTAAATATAATATATTACATTTAATCAATCAAATGGTTTAATTATTACTATG

Coding sequence (CDS)

ATGTTGAATCCGGCGAACGATCTGTTCTCGACGCCGTCTTCTCCGACGAATTCATTCATTTCCTCCTCCGATCTCGACACTGAGTCTACAGGTTCCTTCTTCCATGACAGGAGCACCAGCTTGGGGACTTTAATGGGGGTGAGCTTCCCTGCGATTGCCTTCCGAGTCTCCTCCCAGAGCCGAGGCCACCACGCCGCTGCGGCGGCGACAGCTGACGTTTCCCGCAAGAGCAAAAAGCCAAAGAGAAAAACGACGACGGCGCCGGGGCTAGTCTCTGATCGGAAGCGGAAGTGGTGGCAGCTGTGCAGGGACGACGGTGTTAAACCGGCATCTCTGGGTGACTTTCTTGAGGTGGAACGGAGATTTGGGGATGGTGCTTTTTACGGCAATGCGGTGGATCTAGAAGGCGTGGTTACGGCGGATCAACGGAGGAGTGGTCGGAATTTGTTCGCCGACGGGAGAGTTCTTCCGCCTGCGCCAACGGAGGAAGAAGCATCGGCAGGCGCGGCTCTCCGCCGATTTTCATTATCGCTCACCGGAATTTGCAGCGGCGGTGCCGGCTAA

Protein sequence

MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQSRGHHAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVTADQRRSGRNLFADGRVLPPAPTEEEASAGAALRRFSLSLTGICSGGAG

Homology

[Close]

BLAST of CmaCh18G000770 vs. Swiss-Prot
Match: Y3795_ARATH (Uncharacterized protein At3g17950 OS=Arabidopsis thaliana GN=Y-3 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 9.4e-34
Identity = 102/205 (49.76%), Postives = 124/205 (60.49%), Query Frame = 1


Query: 12  PSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---IAFRVSSQSRGHHAAAA 71
           PSSPT S +SSSDLDTESTGSFFHDRS +LGTLMG SF A   + FR SS+     + A 
Sbjct: 7   PSSPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFSFTATMPMPFRASSRRHVSPSVAI 66

Query: 72  ATADVS--RKSKKPKRKTTTAPGLVSDRKRKWWQLCRDD-------GV-------KPASL 131
           + A  S  R++ + KR  + +      R+RKWW+ CRDD       G+       K +SL
Sbjct: 67  SRASSSNARRNHQRKRPPSNSAEPEPHRRRKWWRFCRDDDDDAAGNGIHRGTGDSKRSSL 126

Query: 132 GDFLEVERRFGDGAFYGNA-VDLEGVVTA---DQR--RSGRNLFADGRVLPPAPTE---- 188
           G++LEVERRFGD A Y +A  +LE  V A   DQ+     R LFADGRVLPPA  E    
Sbjct: 127 GEYLEVERRFGDEAVYNSAEAELEDAVVARYQDQQPVMGERALFADGRVLPPASAEVVTG 186

[Close]

BLAST of CmaCh18G000770 vs. TrEMBL
Match: A0A0A0LQI1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042870 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.4e-76
Identity = 154/188 (81.91%), Postives = 164/188 (87.23%), Query Frame = 1


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           MLNPANDL   PSSPTNS ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAI FRV SQ+
Sbjct: 330 MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 389

Query: 61  RGHHAAAAATADV-SRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVE 120
           R  H AA  TA   SRKSKK KRKTT AP LV+DRKR+WW+LCRDDGVKPASLG+FLEVE
Sbjct: 390 RDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 449

Query: 121 RRFGDGAFYGNAVDLEGVVTADQRRSGRNLFADGRVLPPAPTEEEASAGAALRRFSLSLT 180
           RRFGDGAFYGNAVDLEGVV ADQ+R+GR+LFADGRVLPPA TEE+ S  A L RFS+SLT
Sbjct: 450 RRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAATLCRFSVSLT 509

Query: 181 GICSGGAG 188
           GICSGGAG
Sbjct: 510 GICSGGAG 517

[Close]

BLAST of CmaCh18G000770 vs. TrEMBL
Match: M5WDP9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015800mg PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.8e-53
Identity = 120/199 (60.30%), Postives = 146/199 (73.37%), Query Frame = 1


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           ML+P NDL   PSSPTNS ISSSDLDTESTGSFFHDRST+LGTLMGVSFPAI FR  SQ 
Sbjct: 1   MLDPRNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTTLGTLMGVSFPAITFRAPSQQ 60

Query: 61  R--------GHHAAAAATADVSRKSKKPKRK---TTTAPGLVSDRKRKWWQLCRDDGVKP 120
           R         ++  A+ +   SRK+KKPK+K    ++A G+V++R+R+WW+LCRDD  KP
Sbjct: 61  RRDPQANSNNNNNMASTSGSGSRKTKKPKKKNAAASSAVGVVAERRRRWWRLCRDDCTKP 120

Query: 121 ASLGDFLEVERRFGDGAFYGNAVDLEGVVTADQRRSGRNLFADGRVLPPAPTEEE---AS 180
           ASLG+FLEVERRFGD AFY  A +LEGV+   Q R+GR LFADGRVLPP+  ++    +S
Sbjct: 121 ASLGEFLEVERRFGDNAFYNTAAELEGVMVG-QPRNGRLLFADGRVLPPSNVDDRIATSS 180

Query: 181 AGAALRRFSLSLTGICSGG 186
               L RF +S+T ICSGG
Sbjct: 181 TAGVLSRFPVSITAICSGG 198

[Close]

BLAST of CmaCh18G000770 vs. TrEMBL
Match: A0A151TK57_CAJCA (Uncharacterized protein At3g17950 family OS=Cajanus cajan GN=KK1_023782 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 5.3e-52
Identity = 122/191 (63.87%), Postives = 143/191 (74.87%), Query Frame = 1


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           ML+PA++L   PSSPTNS ISSSDLDTESTGSFFHDRST+LGTLMGVSFPAI FR +S+ 
Sbjct: 1   MLDPASELVPPPSSPTNSSISSSDLDTESTGSFFHDRSTTLGTLMGVSFPAITFR-ASEI 60

Query: 61  RGHHAAAA---ATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLE 120
             H AAAA   A A  SR+  + K+K   A    +DR+R+WW LCRD   +PASLG+FLE
Sbjct: 61  HPHSAAAASVAAAAGDSRRGVESKKKRAIA---AADRRRRWWWLCRDGDARPASLGEFLE 120

Query: 121 VERRFGDGAFYGNAVDLEGVVTADQRRSGRNLFADGRVLPPAPTEEEAS-AGAALRRFSL 180
           VERR GDGAFYG A +LEG+V   QR  GR LF+DGRVLPPA  ++ AS AG+   RF +
Sbjct: 121 VERRCGDGAFYGTAAELEGMVMDPQRSHGRALFSDGRVLPPAVVDDGASTAGSLCSRFPV 180

Query: 181 SLTGICSGGAG 188
            LTGICSGGAG
Sbjct: 181 LLTGICSGGAG 187

[Close]

BLAST of CmaCh18G000770 vs. TrEMBL
Match: A0A0S3QWB7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G004000 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.5e-51
Identity = 118/189 (62.43%), Postives = 138/189 (73.02%), Query Frame = 1


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVS-SQ 60
           ML+PA +L   PSSPTNS ISSSDLDTESTGSFFHDRST+LGTLMGVSFPAI FR S S 
Sbjct: 1   MLDPATELLPPPSSPTNSSISSSDLDTESTGSFFHDRSTTLGTLMGVSFPAITFRASDSH 60

Query: 61  SRGHHAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVE 120
                +AAAA A   R ++  K+K   A    ++R+RKWW LCRD   +PASLG+FLEVE
Sbjct: 61  PHSTISAAAAVAGPQRAAESKKKKAIVA----AERRRKWWWLCRDGDARPASLGEFLEVE 120

Query: 121 RRFGDGAFYGNAVDLEGVVTADQRRSGRNLFADGRVLPPAPTEEEAS-AGAALRRFSLSL 180
           RR GDGAF+G A +LEG+V    R  GR LF+DGRVLPP+  +E AS AG+   RF + L
Sbjct: 121 RRCGDGAFFGTAAELEGMVMDSPRNHGRALFSDGRVLPPSSVDEGASTAGSICSRFPVLL 180

Query: 181 TGICSGGAG 188
           TGICSGGAG
Sbjct: 181 TGICSGGAG 185

[Close]

BLAST of CmaCh18G000770 vs. TrEMBL
Match: G7KQ85_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_6g069830 PE=4 SV=2)

HSP 1 Score: 208.0 bits (528), Expect = 1.0e-50
Identity = 118/190 (62.11%), Postives = 138/190 (72.63%), Query Frame = 1


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           ML+PANDL   PSSP+ S ISSSDLDTESTGSFFHDRST+LGTLMGVSFPAI FR  SQ 
Sbjct: 1   MLDPANDLVPPPSSPSISSISSSDLDTESTGSFFHDRSTTLGTLMGVSFPAITFRAPSQH 60

Query: 61  RGHHAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVER 120
           R  H+ A  +  ++  SKK +R    A    ++R+R+WWQLCR+   +PASLGDFLEVER
Sbjct: 61  RDPHSGAGGSKRIA--SKKKRRPAAVA----AERRRRWWQLCREGDARPASLGDFLEVER 120

Query: 121 RFGDGAFYGNAVDLEGVVTADQRRS-GRNLFADGRVLPPAPT--EEEASAGAALRRFSLS 180
           RFGDGAFY  AV++EG+V   Q R+ GR LFADGRVLPP       E+ A +   RF  S
Sbjct: 121 RFGDGAFYDTAVEMEGMVVGHQERNGGRELFADGRVLPPVGDVGGGESPAVSLCNRFPAS 180

Query: 181 LTGICSGGAG 188
           LTGICSGGAG
Sbjct: 181 LTGICSGGAG 184

[Close]

BLAST of CmaCh18G000770 vs. TAIR10
Match: AT3G17950.1 (AT3G17950.1 unknown protein)

HSP 1 Score: 144.8 bits (364), Expect = 5.3e-35
Identity = 102/205 (49.76%), Postives = 124/205 (60.49%), Query Frame = 1


Query: 12  PSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---IAFRVSSQSRGHHAAAA 71
           PSSPT S +SSSDLDTESTGSFFHDRS +LGTLMG SF A   + FR SS+     + A 
Sbjct: 7   PSSPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFSFTATMPMPFRASSRRHVSPSVAI 66

Query: 72  ATADVS--RKSKKPKRKTTTAPGLVSDRKRKWWQLCRDD-------GV-------KPASL 131
           + A  S  R++ + KR  + +      R+RKWW+ CRDD       G+       K +SL
Sbjct: 67  SRASSSNARRNHQRKRPPSNSAEPEPHRRRKWWRFCRDDDDDAAGNGIHRGTGDSKRSSL 126

Query: 132 GDFLEVERRFGDGAFYGNA-VDLEGVVTA---DQR--RSGRNLFADGRVLPPAPTE---- 188
           G++LEVERRFGD A Y +A  +LE  V A   DQ+     R LFADGRVLPPA  E    
Sbjct: 127 GEYLEVERRFGDEAVYNSAEAELEDAVVARYQDQQPVMGERALFADGRVLPPASAEVVTG 186

[Close]

BLAST of CmaCh18G000770 vs. NCBI nr
Match: gi|659066884|ref|XP_008465627.1| (PREDICTED: uncharacterized protein At3g17950 [Cucumis melo])

HSP 1 Score: 298.1 bits (762), Expect = 1.1e-77
Identity = 157/188 (83.51%), Postives = 167/188 (88.83%), Query Frame = 1


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           MLNPANDL   PSSPTNS ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAI FRV SQ+
Sbjct: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60

Query: 61  RGHHAAAAATADV-SRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVE 120
           R  H AA  TA   SRKSKK KRKTTTAP LV+DRKR+WW+LCRDDGVKPASLG+FLEVE
Sbjct: 61  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120

Query: 121 RRFGDGAFYGNAVDLEGVVTADQRRSGRNLFADGRVLPPAPTEEEASAGAALRRFSLSLT 180
           RRFGDGAFYGNAVDLEGVVTADQ+R+GR+LFADGRVLPPA TEE+ SA  AL RFS+SLT
Sbjct: 121 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 180

Query: 181 GICSGGAG 188
           GICSGGAG
Sbjct: 181 GICSGGAG 188

[Close]

BLAST of CmaCh18G000770 vs. NCBI nr
Match: gi|778657418|ref|XP_011650866.1| (PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 3.4e-76
Identity = 154/188 (81.91%), Postives = 164/188 (87.23%), Query Frame = 1


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           MLNPANDL   PSSPTNS ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAI FRV SQ+
Sbjct: 92  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 151

Query: 61  RGHHAAAAATADV-SRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVE 120
           R  H AA  TA   SRKSKK KRKTT AP LV+DRKR+WW+LCRDDGVKPASLG+FLEVE
Sbjct: 152 RDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 211

Query: 121 RRFGDGAFYGNAVDLEGVVTADQRRSGRNLFADGRVLPPAPTEEEASAGAALRRFSLSLT 180
           RRFGDGAFYGNAVDLEGVV ADQ+R+GR+LFADGRVLPPA TEE+ S  A L RFS+SLT
Sbjct: 212 RRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAATLCRFSVSLT 271

Query: 181 GICSGGAG 188
           GICSGGAG
Sbjct: 272 GICSGGAG 279

[Close]

BLAST of CmaCh18G000770 vs. NCBI nr
Match: gi|700209084|gb|KGN64180.1| (hypothetical protein Csa_1G042870 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 3.4e-76
Identity = 154/188 (81.91%), Postives = 164/188 (87.23%), Query Frame = 1


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           MLNPANDL   PSSPTNS ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAI FRV SQ+
Sbjct: 330 MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 389

Query: 61  RGHHAAAAATADV-SRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVE 120
           R  H AA  TA   SRKSKK KRKTT AP LV+DRKR+WW+LCRDDGVKPASLG+FLEVE
Sbjct: 390 RDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 449

Query: 121 RRFGDGAFYGNAVDLEGVVTADQRRSGRNLFADGRVLPPAPTEEEASAGAALRRFSLSLT 180
           RRFGDGAFYGNAVDLEGVV ADQ+R+GR+LFADGRVLPPA TEE+ S  A L RFS+SLT
Sbjct: 450 RRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAATLCRFSVSLT 509

Query: 181 GICSGGAG 188
           GICSGGAG
Sbjct: 510 GICSGGAG 517

[Close]

BLAST of CmaCh18G000770 vs. NCBI nr
Match: gi|778657421|ref|XP_011650870.1| (PREDICTED: uncharacterized protein At3g17950 isoform X3 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 3.4e-76
Identity = 154/188 (81.91%), Postives = 164/188 (87.23%), Query Frame = 1


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           MLNPANDL   PSSPTNS ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAI FRV SQ+
Sbjct: 87  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 146

Query: 61  RGHHAAAAATADV-SRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVE 120
           R  H AA  TA   SRKSKK KRKTT AP LV+DRKR+WW+LCRDDGVKPASLG+FLEVE
Sbjct: 147 RDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 206

Query: 121 RRFGDGAFYGNAVDLEGVVTADQRRSGRNLFADGRVLPPAPTEEEASAGAALRRFSLSLT 180
           RRFGDGAFYGNAVDLEGVV ADQ+R+GR+LFADGRVLPPA TEE+ S  A L RFS+SLT
Sbjct: 207 RRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAATLCRFSVSLT 266

Query: 181 GICSGGAG 188
           GICSGGAG
Sbjct: 267 GICSGGAG 274

[Close]

BLAST of CmaCh18G000770 vs. NCBI nr
Match: gi|778657415|ref|XP_011650862.1| (PREDICTED: uncharacterized protein At3g17950 isoform X1 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 3.4e-76
Identity = 154/188 (81.91%), Postives = 164/188 (87.23%), Query Frame = 1


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           MLNPANDL   PSSPTNS ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAI FRV SQ+
Sbjct: 112 MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 171

Query: 61  RGHHAAAAATADV-SRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVE 120
           R  H AA  TA   SRKSKK KRKTT AP LV+DRKR+WW+LCRDDGVKPASLG+FLEVE
Sbjct: 172 RDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 231

Query: 121 RRFGDGAFYGNAVDLEGVVTADQRRSGRNLFADGRVLPPAPTEEEASAGAALRRFSLSLT 180
           RRFGDGAFYGNAVDLEGVV ADQ+R+GR+LFADGRVLPPA TEE+ S  A L RFS+SLT
Sbjct: 232 RRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAATLCRFSVSLT 291

Query: 181 GICSGGAG 188
           GICSGGAG
Sbjct: 292 GICSGGAG 299

The following BLAST results are available for this feature:

BLAST of CmaCh18G000770 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y3795_ARATH	9.4e-34	49.76	Uncharacterized protein At3g17950 OS=Arabidopsis thaliana GN=Y-3 PE=1 SV=1	[more]

BLAST of CmaCh18G000770 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQI1_CUCSA	2.4e-76	81.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042870 PE=4 SV=1	[more]
M5WDP9_PRUPE	2.8e-53	60.30	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015800mg PE=4 SV=1	[more]
A0A151TK57_CAJCA	5.3e-52	63.87	Uncharacterized protein At3g17950 family OS=Cajanus cajan GN=KK1_023782 PE=4 SV=...	[more]
A0A0S3QWB7_PHAAN	4.5e-51	62.43	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G004000 PE=...	[more]
G7KQ85_MEDTR	1.0e-50	62.11	Uncharacterized protein OS=Medicago truncatula GN=MTR_6g069830 PE=4 SV=2	[more]

BLAST of CmaCh18G000770 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17950.1	5.3e-35	49.76	unknown protein	[more]

BLAST of CmaCh18G000770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659066884\|ref\|XP_008465627.1\|	1.1e-77	83.51	PREDICTED: uncharacterized protein At3g17950 [Cucumis melo]	[more]
gi\|778657418\|ref\|XP_011650866.1\|	3.4e-76	81.91	PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis sativus]	[more]
gi\|700209084\|gb\|KGN64180.1\|	3.4e-76	81.91	hypothetical protein Csa_1G042870 [Cucumis sativus]	[more]
gi\|778657421\|ref\|XP_011650870.1\|	3.4e-76	81.91	PREDICTED: uncharacterized protein At3g17950 isoform X3 [Cucumis sativus]	[more]
gi\|778657415\|ref\|XP_011650862.1\|	3.4e-76	81.91	PREDICTED: uncharacterized protein At3g17950 isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G000770.1	CmaCh18G000770.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33544	FAMILY NOT NAMED	coord: 1..187 score: 5.1
None	No IPR available	PANTHER	PTHR33544:SF5	SUBFAMILY NOT NAMED	coord: 1..187 score: 5.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G000770	Cucsa.121990	Cucumber (Gy14) v1	cgycmaB0318
CmaCh18G000770	Cla018449	Watermelon (97103) v1	cmawmB396
CmaCh18G000770	Csa1G042870	Cucumber (Chinese Long) v2	cmacuB390
CmaCh18G000770	MELO3C002138	Melon (DHL92) v3.5.1	cmameB365
CmaCh18G000770	ClCG04G010570	Watermelon (Charleston Gray)	cmawcgB363
CmaCh18G000770	CSPI01G07270	Wild cucumber (PI 183967)	cmacpiB394
CmaCh18G000770	CmoCh18G000590	Cucurbita moschata (Rifu)	cmacmoB408
CmaCh18G000770	CmoCh13G010180	Cucurbita moschata (Rifu)	cmacmoB399
CmaCh18G000770	Lsi02G002410	Bottle gourd (USVL1VR-Ls)	cmalsiB370
CmaCh18G000770	Cp4.1LG20g01630	Cucurbita pepo (Zucchini)	cmacpeB439
CmaCh18G000770	MELO3C002138.2	Melon (DHL92) v3.6.1	cmamedB424
CmaCh18G000770	Cla97C04G077390	Watermelon (97103) v2	cmawmbB422
CmaCh18G000770	Bhi08G001082	Wax gourd	cmawgoB0520
CmaCh18G000770	CsGy1G007120	Cucumber (Gy14) v2	cgybcmaB085
CmaCh18G000770	Carg04853	Silver-seed gourd	carcmaB0541

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh18G000770	CmaCh13G009840	Cucurbita maxima (Rimu)	cmacmaB217

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G000770	Silver-seed gourd	carcmaB0692
CmaCh18G000770	Cucumber (Chinese Long) v3	cmacucB0464
CmaCh18G000770	Cucurbita pepo (Zucchini)	cmacpeB416