Cucsa.121990 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.121990
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	BnaAnng11020D protein
Location	scaffold00999 : 354703 .. 355836 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGACAAAATTGAGAATAATAAAAAGGAAGGGTAAGAAGAAAAGAGAAAAAGGCTGCACTAACAATCATTTCAAATCCCCATTTCAATTTTTCACCTCTCTTTCTCTCTCCTTCGATTCCTTCTCTCTATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCTGTTTTtATTTCTCATTCGAATTTCACTCTCAGCTTCTCTATTCAGAGAGAGCGAAAAGAGATGTTGAATCCGGCCAACGATCTGTTACCGCCGCCGTCTTCTCCCACCAATTCATCCATTTCCTCCTCCGATCTCGACACTGAGGTCTACCCCCACCATCCCTTTTCTCTCATTTTCACATTCTTTACTCTGTTTTTTATTTTGGGAAATTCACATCCTTTTTTTGCAGTCTACGGGTTCGTTCTTCCATGACCGGAGTACGAGCTTAGGGACTCTAATGGGGGTCAGCTTCCCGGCGATTACTTTCCGAGTCCCTTCCCAGAACAGAGATCAACACACCGCCGCAACGGTCACCGCAGGCGGAGGTTCTCGTAAGAGTAAGAAGACAAAGAGGAAAACGACGATGGCACCGGCGCTGGTTGCAGATCGGAAACGGCGGTGGTGGAGACTATGTAGGGATGACGGCGTCAAGCCGGCGTCTTTAGGCGAGTTTCTTGAAGTGGAACGGAGATTTGGGGATGGTGCCTTCTACGGCAACGCGGTGGATCTGGAAGGCGTGGTTGCGGCGGATCAACAGAGGAATGGTCGTTCTTTATTCGCCGATGGAAGAGTTCTTCCACCCGCGCAAACGGAGGAAGACACGTCGGGGGCCGCCACTTTATGCCGATTTTCTGTATCACTGACCGGAATTTGTAGCGGCGGTGCCGGTTAACGGGATTTGATTTGTTCAGCATATTTAAAATATTATATTATATTTAATTAATCAAATGCTTTTAATTAATGTGGAAGAAAAAAaGAAAAAAaaAaTGTCACCTTTATTTGTGTAGGTGACCCCTCTTTCTTTTTCTTTATTTTTtCTTTTAATTTCCTTTAATCATCTCACAAGTTCTATCCTCTTTTTCCTTTTTCAAAATAATAAAAAGAAAATTGACAATTAGATCTTATGAAATA

mRNA sequence

ATGAGGACAAAATTGAGAATAATAAAAAGGAAGGGTAAGAAGAAAAGAGAAAAAGGCTGCACTAACAATCATTTCAAATCCCCATTTCAATTTTTCACCTCTCTTTCTCTCTCCTTCGATTCCTTCTCTCTATCATCATCAtcttcttcttcttcttcttcttcttcctcttcctcttcctctGTTTTTATTTCTCATTCGAATTTCACTCTCAGCTTCTCTATTCAGAGAGAGCGAAAAGAGATGTTGAATCCGGCCAACGATCTGTTACCGCCGCCGTCTTCTCCCACCAATTCATCCATTTCCTCCTCCGATCTCGACACTGAGTCTACGGGTTCGTTCTTCCATGACCGGAGTACGAGCTTAGGGACTCTAATGGGGGTCAGCTTCCCGGCGATTACTTTCCGAGTCCCTTCCCAGAACAGAGATCAACACACCGCCGCAACGGTCACCGCAGGCGGAGGTTCTCGTAAGAGTAAGAAGACAAAGAGGAAAACGACGATGGCACCGGCGCTGGTTGCAGATCGGAAACGGCGGTGGTGGAGACTATGTAGGGATGACGGCGTCAAGCCGGCGTCTTTAGGCGAGTTTCTTGAAGTGGAACGGAGATTTGGGGATGGTGCCTTCTACGGCAACGCGGTGGATCTGGAAGGCGTGGTTGCGGCGGATCAACAGAGGAATGGTCGTTCTTTATTCGCCGATGGAAGAGTTCTTCCACCCGCGCAAACGGAGGAAGACACGTCGGGGGCCGCCACTTTATGCCGATTTTCTGTATCACTGACCGGAATTTGTAGCGGCGGTGCCGGTTAACGGGATTTGATTTGTTCAGCatatttaaaatattatattatatttaattaatCAAATGCTTTTAATTAATGTGGAAGAAAAAAAGAAAAAAAAAATGTCACCTTTATTTGTGTAGGTGACCCCTCTTTCTTTTTCTTTATTTTTTCTTTTAATTTCCTTTAATCATCTCACAAGTTCTATCCTCTTTTTCCTTTTTCAAAATAATAAAAAGAAAATTGACAATTAGATCTTATGAAATA

Coding sequence (CDS)

ATGAGGACAAAATTGAGAATAATAAAAAGGAAGGGTAAGAAGAAAAGAGAAAAAGGCTGCACTAACAATCATTTCAAATCCCCATTTCAATTTTTCACCTCTCTTTCTCTCTCCTTCGATTCCTTCTCTCTATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCTGTTTTtATTTCTCATTCGAATTTCACTCTCAGCTTCTCTATTCAGAGAGAGCGAAAAGAGATGTTGAATCCGGCCAACGATCTGTTACCGCCGCCGTCTTCTCCCACCAATTCATCCATTTCCTCCTCCGATCTCGACACTGAGTCTACGGGTTCGTTCTTCCATGACCGGAGTACGAGCTTAGGGACTCTAATGGGGGTCAGCTTCCCGGCGATTACTTTCCGAGTCCCTTCCCAGAACAGAGATCAACACACCGCCGCAACGGTCACCGCAGGCGGAGGTTCTCGTAAGAGTAAGAAGACAAAGAGGAAAACGACGATGGCACCGGCGCTGGTTGCAGATCGGAAACGGCGGTGGTGGAGACTATGTAGGGATGACGGCGTCAAGCCGGCGTCTTTAGGCGAGTTTCTTGAAGTGGAACGGAGATTTGGGGATGGTGCCTTCTACGGCAACGCGGTGGATCTGGAAGGCGTGGTTGCGGCGGATCAACAGAGGAATGGTCGTTCTTTATTCGCCGATGGAAGAGTTCTTCCACCCGCGCAAACGGAGGAAGACACGTCGGGGGCCGCCACTTTATGCCGATTTTCTGTATCACTGACCGGAATTTGTAGCGGCGGTGCCGGTTAA

Protein sequence

MRTKLRIIKRKGKKKREKGCTNNHFKSPFQFFTSLSLSFDSFSLSSSSSSSSSSSSSSSSSVFISHSNFTLSFSIQRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAATLCRFSVSLTGICSGGAG*

Homology

[Close]

BLAST of Cucsa.121990 vs. Swiss-Prot
Match: Y3795_ARATH (Uncharacterized protein At3g17950 OS=Arabidopsis thaliana GN=Y-3 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 8.7e-41
Identity = 106/205 (51.71%), Postives = 127/205 (61.95%), Query Frame = 1


Query: 93  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNR-DQHTAA 152
           PSSPT SS+SSSDLDTESTGSFFHDRS +LGTLMG SF A   + FR  S+       A 
Sbjct: 7   PSSPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFSFTATMPMPFRASSRRHVSPSVAI 66

Query: 153 TVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDD-------GV-------KPASL 212
           +  +   +R++ + KR  + +      R+R+WWR CRDD       G+       K +SL
Sbjct: 67  SRASSSNARRNHQRKRPPSNSAEPEPHRRRKWWRFCRDDDDDAAGNGIHRGTGDSKRSSL 126

Query: 213 GEFLEVERRFGDGAFYGNA-VDLEGVVAA---DQQ--RNGRSLFADGRVLPPAQTE---- 270
           GE+LEVERRFGD A Y +A  +LE  V A   DQQ     R+LFADGRVLPPA  E    
Sbjct: 127 GEYLEVERRFGDEAVYNSAEAELEDAVVARYQDQQPVMGERALFADGRVLPPASAEVVTG 186

[Close]

BLAST of Cucsa.121990 vs. TrEMBL
Match: A0A0A0LQI1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042870 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 3.5e-105
Identity = 198/211 (93.84%), Postives = 201/211 (95.26%), Query Frame = 1


Query: 59  SSSVFISHSNFTLSFSIQRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDR 118
           S +V     + T S S+ RERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDR
Sbjct: 308 SFAVLYLLDSLTSSASL-RERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDR 367

Query: 119 STSLGTLMGVSFPAITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKR 178
           STSLGTLMGVSFPAITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKR
Sbjct: 368 STSLGTLMGVSFPAITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKR 427

Query: 179 RWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVL 238
           RWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVL
Sbjct: 428 RWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVL 487

Query: 239 PPAQTEEDTSGAATLCRFSVSLTGICSGGAG 270
           PPAQTEEDTSGAATLCRFSVSLTGICSGGAG
Sbjct: 488 PPAQTEEDTSGAATLCRFSVSLTGICSGGAG 517

[Close]

BLAST of Cucsa.121990 vs. TrEMBL
Match: M5WDP9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015800mg PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 8.7e-64
Identity = 133/199 (66.83%), Postives = 151/199 (75.88%), Query Frame = 1


Query: 82  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQ- 141
           ML+P NDLLPPPSSPTNSSISSSDLDTESTGSFFHDRST+LGTLMGVSFPAITFR PSQ 
Sbjct: 1   MLDPRNDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTTLGTLMGVSFPAITFRAPSQQ 60

Query: 142 ------NRDQHTAATVTAGGGSRKSKKTKRKTTMAPA---LVADRKRRWWRLCRDDGVKP 201
                 N + +     T+G GSRK+KK K+K   A +   +VA+R+RRWWRLCRDD  KP
Sbjct: 61  RRDPQANSNNNNNMASTSGSGSRKTKKPKKKNAAASSAVGVVAERRRRWWRLCRDDCTKP 120

Query: 202 ASLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEE---DTS 261
           ASLGEFLEVERRFGD AFY  A +LEGV+   Q RNGR LFADGRVLPP+  ++    +S
Sbjct: 121 ASLGEFLEVERRFGDNAFYNTAAELEGVMVG-QPRNGRLLFADGRVLPPSNVDDRIATSS 180

Query: 262 GAATLCRFSVSLTGICSGG 268
            A  L RF VS+T ICSGG
Sbjct: 181 TAGVLSRFPVSITAICSGG 198

[Close]

BLAST of Cucsa.121990 vs. TrEMBL
Match: B9SXS7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0569680 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.9e-63
Identity = 136/209 (65.07%), Postives = 151/209 (72.25%), Query Frame = 1


Query: 82  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 141
           ML+P ND+LPPPSSPTNSSISSSDLDTESTGSFFHDRST+LGTLMGV+FPAITFR PSQ+
Sbjct: 1   MLDPTNDILPPPSSPTNSSISSSDLDTESTGSFFHDRSTTLGTLMGVTFPAITFRAPSQS 60

Query: 142 RDQHTAA----------TVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKP 201
           RD H  A          T TA   ++K+KK KR       L   R+RRWWRLC D   KP
Sbjct: 61  RDNHVTAGGGVAAIASTTSTAANRNKKNKKNKRS-----PLELQRRRRWWRLCSDGESKP 120

Query: 202 ASLGEFLEVERRFGDGAFYGN-AVDLEGVVAADQQ-------RNGRSLFADGRVLPPAQ- 261
           ASLGEFLEVERRFGDGAF+GN A +LEGV+AA QQ       + G  LFADGRVLPPA  
Sbjct: 121 ASLGEFLEVERRFGDGAFFGNAAAELEGVMAAQQQQQEQEQHQQGNGLFADGRVLPPASA 180

Query: 262 --TEEDTSGAATLCRFSVSLTGICSGGAG 270
              ++ TS A  LCRF VSLTGICSGG G
Sbjct: 181 QVVDDGTSTAGILCRFPVSLTGICSGGVG 204

[Close]

BLAST of Cucsa.121990 vs. TrEMBL
Match: W9R7P5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008807 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.3e-63
Identity = 135/194 (69.59%), Postives = 150/194 (77.32%), Query Frame = 1


Query: 82  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 141
           ML+PANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRST+LGTLMGVSFPAI FR PSQ 
Sbjct: 1   MLDPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTTLGTLMGVSFPAIAFRAPSQR 60

Query: 142 RDQHTAAT------VTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDG-VKPASL 201
           R +   +T      V AG GSRK +K   KT  A A+VA+R RRWW LCRDDG  KPASL
Sbjct: 61  RRETPISTSAAQSSVVAGAGSRKCRKA--KTKKAVAVVAERTRRWWSLCRDDGDTKPASL 120

Query: 202 GEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAA--T 261
           GEFLEVERRFGDGAF+G A + E  V   +QRNGR LFADGRVLPPA   ++T+ ++   
Sbjct: 121 GEFLEVERRFGDGAFFGAATEFERAVVG-EQRNGRVLFADGRVLPPAVDVDETTSSSDGA 180

Query: 262 LCRFSVSLTGICSG 267
           LCRF V LTGICSG
Sbjct: 181 LCRFPVYLTGICSG 191

[Close]

BLAST of Cucsa.121990 vs. TrEMBL
Match: I1KQL5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G055100 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 9.7e-63
Identity = 125/189 (66.14%), Postives = 148/189 (78.31%), Query Frame = 1


Query: 82  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 141
           M++PA +L+PPPSSPTNSSISSSDLDTESTGSFFHDRST+LGTLMGVSFPAITFR    +
Sbjct: 1   MVDPATELVPPPSSPTNSSISSSDLDTESTGSFFHDRSTTLGTLMGVSFPAITFRASDPH 60

Query: 142 RDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 201
            +  TA    A GG R++  +K+K  +A   VA+R+RRWW LCRD   +PASLGEFLEVE
Sbjct: 61  PNSATATATAAAGGPRRAAGSKKKRAIA---VAERRRRWWWLCRDGDARPASLGEFLEVE 120

Query: 202 RRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAATLC-RFSVSL 261
           RR GDGAFYG A +LEG+V   Q  +GR+LF+DGRVLPPA  ++D S A +LC RF V L
Sbjct: 121 RRCGDGAFYGTAAELEGMVMDPQSSHGRALFSDGRVLPPAGVDDDASTAGSLCRRFPVLL 180

Query: 262 TGICSGGAG 270
           TGICSGGAG
Sbjct: 181 TGICSGGAG 186

[Close]

BLAST of Cucsa.121990 vs. TAIR10
Match: AT3G17950.1 (AT3G17950.1 unknown protein)

HSP 1 Score: 168.7 bits (426), Expect = 4.9e-42
Identity = 106/205 (51.71%), Postives = 127/205 (61.95%), Query Frame = 1


Query: 93  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNR-DQHTAA 152
           PSSPT SS+SSSDLDTESTGSFFHDRS +LGTLMG SF A   + FR  S+       A 
Sbjct: 7   PSSPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFSFTATMPMPFRASSRRHVSPSVAI 66

Query: 153 TVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDD-------GV-------KPASL 212
           +  +   +R++ + KR  + +      R+R+WWR CRDD       G+       K +SL
Sbjct: 67  SRASSSNARRNHQRKRPPSNSAEPEPHRRRKWWRFCRDDDDDAAGNGIHRGTGDSKRSSL 126

Query: 213 GEFLEVERRFGDGAFYGNA-VDLEGVVAA---DQQ--RNGRSLFADGRVLPPAQTE---- 270
           GE+LEVERRFGD A Y +A  +LE  V A   DQQ     R+LFADGRVLPPA  E    
Sbjct: 127 GEYLEVERRFGDEAVYNSAEAELEDAVVARYQDQQPVMGERALFADGRVLPPASAEVVTG 186

[Close]

BLAST of Cucsa.121990 vs. TAIR10
Match: AT5G02440.1 (AT5G02440.1 unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 2.6e-06
Identity = 27/54 (50.00%), Postives = 36/54 (66.67%), Query Frame = 1


Query: 95  SPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHTAA 149
           SP+ SS SSSDLD++S GSFF DRS +LG L+G+S      R  ++ R+  T A
Sbjct: 47  SPSPSSQSSSDLDSQSMGSFFRDRSYTLGNLIGISSFLELSRRSNRTRNDQTGA 100

[Close]

BLAST of Cucsa.121990 vs. NCBI nr
Match: gi|778657418|ref|XP_011650866.1| (PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis sativus])

HSP 1 Score: 396.4 bits (1017), Expect = 4.1e-107
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1


Query: 73  FSIQRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA 132
           FSIQRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA
Sbjct: 83  FSIQRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA 142

Query: 133 ITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPA 192
           ITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPA
Sbjct: 143 ITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPA 202

Query: 193 SLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAAT 252
           SLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAAT
Sbjct: 203 SLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAAT 262

Query: 253 LCRFSVSLTGICSGGAG 270
           LCRFSVSLTGICSGGAG
Sbjct: 263 LCRFSVSLTGICSGGAG 279

[Close]

BLAST of Cucsa.121990 vs. NCBI nr
Match: gi|778657421|ref|XP_011650870.1| (PREDICTED: uncharacterized protein At3g17950 isoform X3 [Cucumis sativus])

HSP 1 Score: 396.4 bits (1017), Expect = 4.1e-107
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1


Query: 73  FSIQRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA 132
           FSIQRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA
Sbjct: 78  FSIQRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA 137

Query: 133 ITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPA 192
           ITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPA
Sbjct: 138 ITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPA 197

Query: 193 SLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAAT 252
           SLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAAT
Sbjct: 198 SLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAAT 257

Query: 253 LCRFSVSLTGICSGGAG 270
           LCRFSVSLTGICSGGAG
Sbjct: 258 LCRFSVSLTGICSGGAG 274

[Close]

BLAST of Cucsa.121990 vs. NCBI nr
Match: gi|778657415|ref|XP_011650862.1| (PREDICTED: uncharacterized protein At3g17950 isoform X1 [Cucumis sativus])

HSP 1 Score: 396.4 bits (1017), Expect = 4.1e-107
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1


Query: 73  FSIQRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA 132
           FSIQRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA
Sbjct: 103 FSIQRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA 162

Query: 133 ITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPA 192
           ITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPA
Sbjct: 163 ITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPA 222

Query: 193 SLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAAT 252
           SLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAAT
Sbjct: 223 SLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAAT 282

Query: 253 LCRFSVSLTGICSGGAG 270
           LCRFSVSLTGICSGGAG
Sbjct: 283 LCRFSVSLTGICSGGAG 299

[Close]

BLAST of Cucsa.121990 vs. NCBI nr
Match: gi|700209084|gb|KGN64180.1| (hypothetical protein Csa_1G042870 [Cucumis sativus])

HSP 1 Score: 389.4 bits (999), Expect = 5.0e-105
Identity = 198/211 (93.84%), Postives = 201/211 (95.26%), Query Frame = 1


Query: 59  SSSVFISHSNFTLSFSIQRERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDR 118
           S +V     + T S S+ RERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDR
Sbjct: 308 SFAVLYLLDSLTSSASL-RERKEMLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDR 367

Query: 119 STSLGTLMGVSFPAITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKR 178
           STSLGTLMGVSFPAITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKR
Sbjct: 368 STSLGTLMGVSFPAITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKR 427

Query: 179 RWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVL 238
           RWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVL
Sbjct: 428 RWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVL 487

Query: 239 PPAQTEEDTSGAATLCRFSVSLTGICSGGAG 270
           PPAQTEEDTSGAATLCRFSVSLTGICSGGAG
Sbjct: 488 PPAQTEEDTSGAATLCRFSVSLTGICSGGAG 517

[Close]

BLAST of Cucsa.121990 vs. NCBI nr
Match: gi|659066884|ref|XP_008465627.1| (PREDICTED: uncharacterized protein At3g17950 [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 1.2e-98
Identity = 182/188 (96.81%), Postives = 182/188 (96.81%), Query Frame = 1


Query: 82  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 141
           MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN
Sbjct: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60

Query: 142 RDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 201
           RDQHTAATVTAGGGSRKSKKTKRKTT APALVADRKRRWWRLCRDDGVKPASLGEFLEVE
Sbjct: 61  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120

Query: 202 RRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAATLCRFSVSLT 261
           RRFGDGAFYGNAVDLEGVV ADQQRNGRSLFADGRVLPPAQTEEDTS    LCRFSVSLT
Sbjct: 121 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 180

Query: 262 GICSGGAG 270
           GICSGGAG
Sbjct: 181 GICSGGAG 188

The following BLAST results are available for this feature:

BLAST of Cucsa.121990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y3795_ARATH	8.7e-41	51.71	Uncharacterized protein At3g17950 OS=Arabidopsis thaliana GN=Y-3 PE=1 SV=1	[more]

BLAST of Cucsa.121990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQI1_CUCSA	3.5e-105	93.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042870 PE=4 SV=1	[more]
M5WDP9_PRUPE	8.7e-64	66.83	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015800mg PE=4 SV=1	[more]
B9SXS7_RICCO	1.9e-63	65.07	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0569680 PE=4 SV=1	[more]
W9R7P5_9ROSA	3.3e-63	69.59	Uncharacterized protein OS=Morus notabilis GN=L484_008807 PE=4 SV=1	[more]
I1KQL5_SOYBN	9.7e-63	66.14	Uncharacterized protein OS=Glycine max GN=GLYMA_08G055100 PE=4 SV=1	[more]

BLAST of Cucsa.121990 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17950.1	4.9e-42	51.71	unknown protein	[more]
AT5G02440.1	2.6e-06	50.00	unknown protein	[more]

BLAST of Cucsa.121990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778657418\|ref\|XP_011650866.1\|	4.1e-107	100.00	PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis sativus]	[more]
gi\|778657421\|ref\|XP_011650870.1\|	4.1e-107	100.00	PREDICTED: uncharacterized protein At3g17950 isoform X3 [Cucumis sativus]	[more]
gi\|778657415\|ref\|XP_011650862.1\|	4.1e-107	100.00	PREDICTED: uncharacterized protein At3g17950 isoform X1 [Cucumis sativus]	[more]
gi\|700209084\|gb\|KGN64180.1\|	5.0e-105	93.84	hypothetical protein Csa_1G042870 [Cucumis sativus]	[more]
gi\|659066884\|ref\|XP_008465627.1\|	1.2e-98	96.81	PREDICTED: uncharacterized protein At3g17950 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.121990.1	Cucsa.121990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33544	FAMILY NOT NAMED	coord: 53..269 score: 8.1
None	No IPR available	PANTHER	PTHR33544:SF5	SUBFAMILY NOT NAMED	coord: 53..269 score: 8.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.121990	Cla018449	Watermelon (97103) v1	cgywmB193
Cucsa.121990	MELO3C002138	Melon (DHL92) v3.5.1	cgymeB185
Cucsa.121990	ClCG04G010570	Watermelon (Charleston Gray)	cgywcgB190
Cucsa.121990	CmaCh18G000770	Cucurbita maxima (Rimu)	cgycmaB0318
Cucsa.121990	CmoCh18G000590	Cucurbita moschata (Rifu)	cgycmoB0315
Cucsa.121990	CmoCh13G010180	Cucurbita moschata (Rifu)	cgycmoB0314
Cucsa.121990	MELO3C002138.2	Melon (DHL92) v3.6.1	cgymedB182
Cucsa.121990	Cla97C04G077390	Watermelon (97103) v2	cgywmbB186
Cucsa.121990	Carg04853	Silver-seed gourd	carcgyB0452

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.121990	Cucurbita pepo (Zucchini)	cgycpeB0306
Cucsa.121990	Cucurbita pepo (Zucchini)	cgycpeB0308
Cucsa.121990	Bottle gourd (USVL1VR-Ls)	cgylsiB181
Cucsa.121990	Silver-seed gourd	carcgyB0568
Cucsa.121990	Cucumber (Chinese Long) v3	cgycucB163
Cucsa.121990	Wax gourd	cgywgoB218
Cucsa.121990	Cucurbita maxima (Rimu)	cgycmaB0317
Cucsa.121990	Wild cucumber (PI 183967)	cgycpiB160
Cucsa.121990	Cucumber (Chinese Long) v2	cgycuB159