CmaCh15G014430 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G014430
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	BnaA05g03690D protein
Location	Cma_Chr15 : 9142856 .. 9143197 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTTTGATTCCGATGTTCTACAGAGCGATGAAGAAAACCAGAATCAGAAGCCAATATTCAGTACTTTCCCCTGAAGCAGCAGCAGCAGCAGCACCTTCTCCATCTTTCAACATTGCTGATTTCTACGTGGATCCCCCTTCAACCCACGTCTTCCCCACTTCCAAATCTGAGGACCCTGGCGCCCCCAGGGCCCGCCGGAGATACAACTCGTTCGGTGGATCTACGCCGGAGGAGTGGAGGAGAACTACCTCCGCCGCCGCCGGCAAGTCCAGTCATGGGCCACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGGCAATGA

mRNA sequence

ATGGAGGGTTTGATTCCGATGTTCTACAGAGCGATGAAGAAAACCAGAATCAGAAGCCAATATTCAGTACTTTCCCCTGAAGCAGCAGCAGCAGCAGCACCTTCTCCATCTTTCAACATTGCTGATTTCTACGTGGATCCCCCTTCAACCCACGTCTTCCCCACTTCCAAATCTGAGGACCCTGGCGCCCCCAGGGCCCGCCGGAGATACAACTCGTTCGGTGGATCTACGCCGGAGGAGTGGAGGAGAACTACCTCCGCCGCCGCCGGCAAGTCCAGTCATGGGCCACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGGCAATGA

Coding sequence (CDS)

ATGGAGGGTTTGATTCCGATGTTCTACAGAGCGATGAAGAAAACCAGAATCAGAAGCCAATATTCAGTACTTTCCCCTGAAGCAGCAGCAGCAGCAGCACCTTCTCCATCTTTCAACATTGCTGATTTCTACGTGGATCCCCCTTCAACCCACGTCTTCCCCACTTCCAAATCTGAGGACCCTGGCGCCCCCAGGGCCCGCCGGAGATACAACTCGTTCGGTGGATCTACGCCGGAGGAGTGGAGGAGAACTACCTCCGCCGCCGCCGGCAAGTCCAGTCATGGGCCACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGGCAATGA

Protein sequence

MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAAPSPSFNIADFYVDPPSTHVFPTSKSEDPGAPRARRRYNSFGGSTPEEWRRTTSAAAGKSSHGPQLVRFRSQRILSCLTGQ

Homology

[Close]

BLAST of CmaCh15G014430 vs. TrEMBL
Match: A0A0A0LL24_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123040 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.0e-25
Identity = 76/119 (63.87%), Postives = 84/119 (70.59%), Query Frame = 1


Query: 1   MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAA---APSPSFNIADFYVDPPSTHVFPTSK 60
           M+GLIP+FYRAMKK R R QY+VLS +A + A   A S SFNIADFYVDPPS       K
Sbjct: 1   MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSI------K 60

Query: 61  SEDPGAPRARRRYNSFGGSTPEEWRRTTSAAAGKSSHGP----QLVRFRSQRILSCLTG 113
           SE     RA RRYNS+ GST +EWRR+  AA   SSHGP    QLVRFRSQRILSCLTG
Sbjct: 61  SEG----RAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRSQRILSCLTG 109

[Close]

BLAST of CmaCh15G014430 vs. TrEMBL
Match: A0A022R3R0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016808mg PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.4e-09
Identity = 49/116 (42.24%), Postives = 60/116 (51.72%), Query Frame = 1


Query: 1   MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAAPSPSFNIADFYVDPPSTHVFP-TSKSE 60
           MEGLIPM Y+++KK++ R  Y  LS  AA A      +NI+DFYV     +V     K  
Sbjct: 1   MEGLIPMMYKSLKKSKTRRNYECLSTGAAQA------YNISDFYVREGDHYVIAGPDKVP 60

Query: 61  DPGAPRARRRYNSF---GGSTPEEWRRTTSAAAGKSSHGPQLVRFRSQRILSCLTG 113
             G P   RRYNS    GG     +     AA  K     QLVRFRS R+ SC+TG
Sbjct: 61  GLGGPPHHRRYNSVHVAGGGAARGFEEEEEAAKSK-----QLVRFRSHRMFSCVTG 105

[Close]

BLAST of CmaCh15G014430 vs. TrEMBL
Match: B9T533_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0211550 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-08
Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 1


Query: 1   MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAAPSPSFNIADFYV-DPPSTHVFPTS--- 60
           MEGL+P+ Y+A+K+ R R QY  LS  AA A      +N ADFY+ D  +T+  P+S   
Sbjct: 1   MEGLLPLVYKAIKRNRTRRQYECLSSGAAFA------YNPADFYISDAETTYTKPSSIIM 60

Query: 61  KSEDPGAPRARRRYNSFGGSTPEEWRRTTSA---AAGKSSHGPQLVRFRSQRILSCLTG 113
           +  + G  R++    S+  S+ E+   T S+    AG S    QLVRFRSQR+ SC+TG
Sbjct: 61  EKNNAGTGRSKLHRRSY--SSVEDLSVTGSSRRRTAGASPPRKQLVRFRSQRMFSCVTG 111

[Close]

BLAST of CmaCh15G014430 vs. TrEMBL
Match: A0A0D2RMK6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G213700 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.1e-07
Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 1   MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAAPSPSFNIADFYVDPPSTHVFPTSKS-- 60
           MEGLIP+ YR +KK + R QY  LS  AA       S++I++FYV  PS ++ P + S  
Sbjct: 1   MEGLIPLVYRRLKKAKTRRQYECLSSGAA------KSYDISEFYVQSPSQYMKPNNTSMA 60

Query: 61  -EDPGAPRARRRYNS--FGGSTPEEWRRTTSAAAGKSSHGPQLVRFRSQRILSCLTG 113
            ++ G    RRR ++    G    E   +T+ A  K      L RFRS R+ SC+TG
Sbjct: 61  EKNIGGQGHRRRMSTGDISGMDGMETGESTTPAVAK------LTRFRSHRMFSCVTG 105

[Close]

BLAST of CmaCh15G014430 vs. TrEMBL
Match: A0A022RCK1_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016855mg PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-06
Identity = 48/117 (41.03%), Postives = 66/117 (56.41%), Query Frame = 1


Query: 1   MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAAPSPSFNIADFYVDPPSTHVFPTSKSED 60
           MEGLIP+ Y+++KK +IR +Y  LS  AAA    + ++NI DFY +     + P    E 
Sbjct: 1   MEGLIPIVYKSLKKNKIRRKYECLSYGAAA----TQTYNIEDFYTN--DDIIMP----ET 60

Query: 61  PGAPRAR----RRYNSFGGSTPEEWRRTTSAAAGKSSHGPQLVRFRSQRIL-SCLTG 113
            GAP +R    RRYN    S   ++ +  S+    +    QLVRFRS R+L SCLTG
Sbjct: 61  GGAPASRGPHHRRYN----SVHVDYLKGYSSEHDHAYKAKQLVRFRSHRMLSSCLTG 103

[Close]

BLAST of CmaCh15G014430 vs. NCBI nr
Match: gi|449442349|ref|XP_004138944.1| (PREDICTED: uncharacterized protein LOC101210346 [Cucumis sativus])

HSP 1 Score: 123.2 bits (308), Expect = 2.8e-25
Identity = 76/119 (63.87%), Postives = 84/119 (70.59%), Query Frame = 1


Query: 1   MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAA---APSPSFNIADFYVDPPSTHVFPTSK 60
           M+GLIP+FYRAMKK R R QY+VLS +A + A   A S SFNIADFYVDPPS       K
Sbjct: 1   MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSI------K 60

Query: 61  SEDPGAPRARRRYNSFGGSTPEEWRRTTSAAAGKSSHGP----QLVRFRSQRILSCLTG 113
           SE     RA RRYNS+ GST +EWRR+  AA   SSHGP    QLVRFRSQRILSCLTG
Sbjct: 61  SEG----RAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRSQRILSCLTG 109

[Close]

BLAST of CmaCh15G014430 vs. NCBI nr
Match: gi|659082088|ref|XP_008441665.1| (PREDICTED: uncharacterized protein LOC103485749 [Cucumis melo])

HSP 1 Score: 122.1 bits (305), Expect = 6.3e-25
Identity = 75/119 (63.03%), Postives = 83/119 (69.75%), Query Frame = 1


Query: 1   MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAA---APSPSFNIADFYVDPPSTHVFPTSK 60
           M+GLIPMFYRAMKK R R QY+VLS +A + +   A S SFNIADFYVDPPS       K
Sbjct: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSI------K 60

Query: 61  SEDPGAPRARRRYNSFGGSTPEEWRRTTSAAAGKSSHG----PQLVRFRSQRILSCLTG 113
           SE     R  RRYNS+GGSTP+EWRR+  AA    SHG     QLVRFRSQRILSCLTG
Sbjct: 61  SEG----RGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTG 109

[Close]

BLAST of CmaCh15G014430 vs. NCBI nr
Match: gi|848881584|ref|XP_012841145.1| (PREDICTED: uncharacterized protein LOC105961460 [Erythranthe guttata])

HSP 1 Score: 68.9 bits (167), Expect = 6.3e-09
Identity = 49/116 (42.24%), Postives = 60/116 (51.72%), Query Frame = 1


Query: 1   MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAAPSPSFNIADFYVDPPSTHVFP-TSKSE 60
           MEGLIPM Y+++KK++ R  Y  LS  AA A      +NI+DFYV     +V     K  
Sbjct: 1   MEGLIPMMYKSLKKSKTRRNYECLSTGAAQA------YNISDFYVREGDHYVIAGPDKVP 60

Query: 61  DPGAPRARRRYNSF---GGSTPEEWRRTTSAAAGKSSHGPQLVRFRSQRILSCLTG 113
             G P   RRYNS    GG     +     AA  K     QLVRFRS R+ SC+TG
Sbjct: 61  GLGGPPHHRRYNSVHVAGGGAARGFEEEEEAAKSK-----QLVRFRSHRMFSCVTG 105

[Close]

BLAST of CmaCh15G014430 vs. NCBI nr
Match: gi|255585307|ref|XP_002533352.1| (PREDICTED: uncharacterized protein LOC8261699 [Ricinus communis])

HSP 1 Score: 67.0 bits (162), Expect = 2.4e-08
Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 1


Query: 1   MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAAPSPSFNIADFYV-DPPSTHVFPTS--- 60
           MEGL+P+ Y+A+K+ R R QY  LS  AA A      +N ADFY+ D  +T+  P+S   
Sbjct: 1   MEGLLPLVYKAIKRNRTRRQYECLSSGAAFA------YNPADFYISDAETTYTKPSSIIM 60

Query: 61  KSEDPGAPRARRRYNSFGGSTPEEWRRTTSA---AAGKSSHGPQLVRFRSQRILSCLTG 113
           +  + G  R++    S+  S+ E+   T S+    AG S    QLVRFRSQR+ SC+TG
Sbjct: 61  EKNNAGTGRSKLHRRSY--SSVEDLSVTGSSRRRTAGASPPRKQLVRFRSQRMFSCVTG 111

[Close]

BLAST of CmaCh15G014430 vs. NCBI nr
Match: gi|645275992|ref|XP_008243080.1| (PREDICTED: uncharacterized protein LOC103341345 [Prunus mume])

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-07
Identity = 55/145 (37.93%), Postives = 71/145 (48.97%), Query Frame = 1


Query: 1   MEGLIPMFYRAMKKTRIRSQYSVLSPE-AAAAAAPSPSFNIADFYVDPPSTHVF-----P 60
           MEGLIPM Y+AMK+ R R QYS LS   +++A+A   ++NIADFY+DP  T+       P
Sbjct: 1   MEGLIPMVYKAMKRNRTRRQYSSLSSSLSSSASAAQTNYNIADFYIDPNQTNYVYVPPPP 60

Query: 61  TSKSEDPGAPRARR------RYNSFGG----STPEE-----------------WRRTTSA 112
            + S  P     R         N+ GG    S P E                  RR  S 
Sbjct: 61  PAASSTPHDHHRRLSLDTIFNVNNNGGFSTVSAPVEHKSSSSTNNIINGQVIQHRRHKSV 120

The following BLAST results are available for this feature:

BLAST of CmaCh15G014430 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh15G014430 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL24_CUCSA	2.0e-25	63.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123040 PE=4 SV=1	[more]
A0A022R3R0_ERYGU	4.4e-09	42.24	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016808mg PE=4 SV=1	[more]
B9T533_RICCO	1.7e-08	41.18	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0211550 PE=4 SV=1	[more]
A0A0D2RMK6_GOSRA	4.1e-07	38.46	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G213700 PE=4 SV=1	[more]
A0A022RCK1_ERYGU	1.6e-06	41.03	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016855mg PE=4 SV=1	[more]

BLAST of CmaCh15G014430 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmaCh15G014430 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442349\|ref\|XP_004138944.1\|	2.8e-25	63.87	PREDICTED: uncharacterized protein LOC101210346 [Cucumis sativus]	[more]
gi\|659082088\|ref\|XP_008441665.1\|	6.3e-25	63.03	PREDICTED: uncharacterized protein LOC103485749 [Cucumis melo]	[more]
gi\|848881584\|ref\|XP_012841145.1\|	6.3e-09	42.24	PREDICTED: uncharacterized protein LOC105961460 [Erythranthe guttata]	[more]
gi\|255585307\|ref\|XP_002533352.1\|	2.4e-08	41.18	PREDICTED: uncharacterized protein LOC8261699 [Ricinus communis]	[more]
gi\|645275992\|ref\|XP_008243080.1\|	4.5e-07	37.93	PREDICTED: uncharacterized protein LOC103341345 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G014430.1	CmaCh15G014430.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35485	FAMILY NOT NAMED	coord: 2..113 score: 2.3
None	No IPR available	PANTHER	PTHR35485:SF1	EXPRESSED PROTEIN	coord: 2..113 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G014430	Cucsa.266140	Cucumber (Gy14) v1	cgycmaB0742
CmaCh15G014430	Cla000856	Watermelon (97103) v1	cmawmB289
CmaCh15G014430	Csa2G123040	Cucumber (Chinese Long) v2	cmacuB279
CmaCh15G014430	MELO3C008506	Melon (DHL92) v3.5.1	cmameB277
CmaCh15G014430	ClCG06G009780	Watermelon (Charleston Gray)	cmawcgB268
CmaCh15G014430	CSPI02G08860	Wild cucumber (PI 183967)	cmacpiB283
CmaCh15G014430	CmoCh15G015220	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G014430	Cp4.1LG13g00020	Cucurbita pepo (Zucchini)	cmacpeB306
CmaCh15G014430	MELO3C008506.2	Melon (DHL92) v3.6.1	cmamedB317
CmaCh15G014430	CsaV3_2G011240	Cucumber (Chinese Long) v3	cmacucB0329
CmaCh15G014430	Cla97C06G119300	Watermelon (97103) v2	cmawmbB312
CmaCh15G014430	Bhi12G001187	Wax gourd	cmawgoB0378
CmaCh15G014430	CsGy2G009140	Cucumber (Gy14) v2	cgybcmaB191
CmaCh15G014430	Carg19743	Silver-seed gourd	carcmaB1182
CmaCh15G014430	Carg20736	Silver-seed gourd	carcmaB1033

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None