MELO3C008506 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C008506
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Alcohol dehydrogenase [NADP(+)]
Location	chr5 : 11288110 .. 11288871 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACTTTCAATACGATTACAAAAAAATTAAAAAAAAAAAAGAAAAAAAAGAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAACCAAAACCAAAAACCTCTGTTTTTCTTCAAAGAAAGCAAAAAGGGAAATGGATGGTTTGATTCCGATGTTTTATAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAATATACAGTGCTTTCCACAAAAGCAGAATCAGAATCAGAAGGGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCGCCTTCTATCAAATCTGAGGGCAGGGGTTACCGGAGATACAACTCATACGGCGGATCTACCCCTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGGAGTCATGGGCAACCACCGGAACAACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCCTGCTTGACTGGCCATTAAAATTTGTGAGCCCTTATTCTTCCAACTTTAAAATTAATCAATATGTACAGCATAATTATATCTTTCATCTTCAAAACTACTTGATGATGTTGATTCTCTTCAAGGCTTTTGTTTTAATCCAAATTTTGTGCATTTCTTTTTTCTTTTTTCTTTTTCTTTTCTTTTTTTTCTTGGTGGTTGTTGTGTATTGCAAAGTTGGTCAAAATGGAGATTGGTGGACAAGATTATCTTATTTGACTTTTTGTAAATCATGAGTTGTAATAAGAAATCAAATAAATCAACAAACCCATAACACCTA

mRNA sequence

ACACTTTCAATACGATTACAAAAAAATTAAAAAAAAAAAAGAAAAAAAAGAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAACCAAAACCAAAAACCTCTGTTTTTCTTCAAAGAAAGCAAAAAGGGAAATGGATGGTTTGATTCCGATGTTTTATAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAATATACAGTGCTTTCCACAAAAGCAGAATCAGAATCAGAAGGGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCGCCTTCTATCAAATCTGAGGGCAGGGGTTACCGGAGATACAACTCATACGGCGGATCTACCCCTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGGAGTCATGGGCAACCACCGGAACAACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCCTGCTTGACTGGCCATTAAAATTTGTGAGCCCTTATTCTTCCAACTTTAAAATTAATCAATATGTACAGCATAATTATATCTTTCATCTTCAAAACTACTTGATGATGTTGATTCTCTTCAAGGCTTTTGTTTTAATCCAAATTTTGTGCATTTCTTTTTTCTTTTTTCTTTTTCTTTTCTTTTTTTTCTTGGTGGTTGTTGTGTATTGCAAAGTTGGTCAAAATGGAGATTGGTGGACAAGATTATCTTATTTGACTTTTTGTAAATCATGAGTTGTAATAAGAAATCAAATAAATCAACAAACCCATAACACCTA

Coding sequence (CDS)

ATGGATGGTTTGATTCCGATGTTTTATAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAATATACAGTGCTTTCCACAAAAGCAGAATCAGAATCAGAAGGGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCGCCTTCTATCAAATCTGAGGGCAGGGGTTACCGGAGATACAACTCATACGGCGGATCTACCCCTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGGAGTCATGGGCAACCACCGGAACAACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCCTGCTTGACTGGCCATTAA

Protein sequence

MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH*

Homology

[Close]

BLAST of MELO3C008506 vs. TrEMBL
Match: A0A0A0LL24_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123040 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 4.6e-51
Identity = 102/110 (92.73%), Postives = 104/110 (94.55%), Query Frame = 1


Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
           MDGLIP+FYRAMKKNRRRRQYTVLSTKAESE+E EAASLSFNIADFYVDPPSIKSEGR Y
Sbjct: 1   MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAY 60

Query: 61  RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 111
           RRYNSY GST QEWRRSGVAAGKS SHG PPEQQLVRFRSQRILSCLTGH
Sbjct: 61  RRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRSQRILSCLTGH 110

[Close]

BLAST of MELO3C008506 vs. TrEMBL
Match: A0A061EPK1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021536 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.1e-10
Identity = 46/123 (37.40%), Postives = 66/123 (53.66%), Query Frame = 1


Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPS-------- 60
           M+GLIP+ YR +KKN+ RRQY  LS+          A+ ++NIADF VD  S        
Sbjct: 1   MEGLIPLVYRTLKKNKTRRQYQCLSS---------GAAQTYNIADFDVDGQSPVCMKPST 60

Query: 61  ------IKSEGRGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSC 110
                 +K++  G+RR+ S G  + +     G+  G S +   PP  +L RFRS R+ SC
Sbjct: 61  AEKSCGLKTQRNGHRRHVSMGDFSMRYSSADGMKTGASPT---PPAPKLKRFRSHRMFSC 111

[Close]

BLAST of MELO3C008506 vs. TrEMBL
Match: V4TZC8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022922mg PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 8.7e-10
Identity = 50/123 (40.65%), Postives = 63/123 (51.22%), Query Frame = 1


Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADF-----------YVD 60
           MDGLIPM ++A+KKN+ RRQY  LS+          A+ S+N ADF           YV 
Sbjct: 1   MDGLIPMVFKAIKKNKTRRQYECLSS---------GAAQSYNAADFNSNIIAHQNSMYVT 60

Query: 61  PPSIKSE-GRGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPP--EQQLVRFRSQRILSC 110
               K E G G+RR+ S G         +G   G     G PP   +QLVRFRS R+ SC
Sbjct: 61  RSGEKMEPGHGHRRHKSVGDFYAGYSVANGGGFGGGGGGGSPPPRAKQLVRFRSHRMFSC 114

[Close]

BLAST of MELO3C008506 vs. TrEMBL
Match: B9T533_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0211550 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-09
Identity = 44/121 (36.36%), Postives = 68/121 (56.20%), Query Frame = 1


Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVD--------PPS 60
           M+GL+P+ Y+A+K+NR RRQY  LS+          A+ ++N ADFY+         P S
Sbjct: 1   MEGLLPLVYKAIKRNRTRRQYECLSS---------GAAFAYNPADFYISDAETTYTKPSS 60

Query: 61  IKSE----GRGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLT 110
           I  E    G G  + +    S+ ++   +G ++ +  +   PP +QLVRFRSQR+ SC+T
Sbjct: 61  IIMEKNNAGTGRSKLHRRSYSSVEDLSVTG-SSRRRTAGASPPRKQLVRFRSQRMFSCVT 111

[Close]

BLAST of MELO3C008506 vs. TrEMBL
Match: M5W644_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026279mg PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.3e-09
Identity = 56/152 (36.84%), Postives = 72/152 (47.37%), Query Frame = 1


Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVD----------- 60
           M+GLIPM Y+AMK+NR RRQY+ LS+   S +   AA  ++NIADFY+D           
Sbjct: 1   MEGLIPMVYKAMKRNRTRRQYSSLSSSLSSSA--SAAQTNYNIADFYIDPNQTNYVYVPP 60

Query: 61  -PPSIKSEGRGYRR---------YNSYGG----STP------------------QEWRRS 109
            PP+  S    + R          N+ GG    S P                  Q  R  
Sbjct: 61  PPPAASSTPHDHHRRPSLDTIFNVNNNGGFSTVSAPVEHKSSSSTNNIINGQVIQHRRHK 120

[Close]

BLAST of MELO3C008506 vs. TAIR10
Match: AT2G44010.1 (AT2G44010.1 unknown protein)

HSP 1 Score: 62.0 bits (149), Expect = 2.7e-10
Identity = 46/114 (40.35%), Postives = 60/114 (52.63%), Query Frame = 1


Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAES-ESEGEAASLSFNIADFYVDPPSIKSEGRG 60
           MDGLIPM  +A+KKN  RR+Y  LS  A + ES   A+ +  N+            +GR 
Sbjct: 1   MDGLIPMALKAVKKNLTRRRYERLSYSATTRESYDFASDIEMNV------------DGRH 60

Query: 61  YRRYNSYGG----STPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTG 110
           +RR  S G     S+ +  R  GVA  KS +   P E QLVRF+S R+ SC++G
Sbjct: 61  HRRGWSVGDFSSLSSRETKRNGGVAPEKSLT--PPREGQLVRFKSHRLFSCISG 100

[Close]

BLAST of MELO3C008506 vs. TAIR10
Match: AT3G59880.1 (AT3G59880.1 unknown protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.2e-07
Identity = 40/133 (30.08%), Postives = 66/133 (49.62%), Query Frame = 1


Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFY------------- 60
           MDGLIPM ++AM+KNR R++Y  LS+ A +  +      S++ +DF+             
Sbjct: 1   MDGLIPMAFKAMRKNRTRKRYECLSSSAGTTKD------SYDDSDFFPFAAKSDHSVVSR 60

Query: 61  -------VDPPSIKSEGRGYRRYN--SYGGSTPQEWRRSGVAAGKSRSHGQPPEQ--QLV 110
                  ++  ++  + R +R ++   +   + +E +RSGV  G     G  P +  QLV
Sbjct: 61  PSSSFDHIEMNNVDVQQRHHRGWSVGDFSSMSCREGKRSGVDGG---DIGFSPSRRGQLV 120

[Close]

BLAST of MELO3C008506 vs. NCBI nr
Match: gi|659082088|ref|XP_008441665.1| (PREDICTED: uncharacterized protein LOC103485749 [Cucumis melo])

HSP 1 Score: 226.1 bits (575), Expect = 3.0e-56
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1


Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
           MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY
Sbjct: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60

Query: 61  RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 111
           RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH
Sbjct: 61  RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 110

[Close]

BLAST of MELO3C008506 vs. NCBI nr
Match: gi|449442349|ref|XP_004138944.1| (PREDICTED: uncharacterized protein LOC101210346 [Cucumis sativus])

HSP 1 Score: 208.4 bits (529), Expect = 6.5e-51
Identity = 102/110 (92.73%), Postives = 104/110 (94.55%), Query Frame = 1


Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPSIKSEGRGY 60
           MDGLIP+FYRAMKKNRRRRQYTVLSTKAESE+E EAASLSFNIADFYVDPPSIKSEGR Y
Sbjct: 1   MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAY 60

Query: 61  RRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLTGH 111
           RRYNSY GST QEWRRSGVAAGKS SHG PPEQQLVRFRSQRILSCLTGH
Sbjct: 61  RRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRSQRILSCLTGH 110

[Close]

BLAST of MELO3C008506 vs. NCBI nr
Match: gi|590627599|ref|XP_007026483.1| (Uncharacterized protein TCM_021536 [Theobroma cacao])

HSP 1 Score: 72.0 bits (175), Expect = 7.3e-10
Identity = 46/123 (37.40%), Postives = 66/123 (53.66%), Query Frame = 1


Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPS-------- 60
           M+GLIP+ YR +KKN+ RRQY  LS+          A+ ++NIADF VD  S        
Sbjct: 1   MEGLIPLVYRTLKKNKTRRQYQCLSS---------GAAQTYNIADFDVDGQSPVCMKPST 60

Query: 61  ------IKSEGRGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSC 110
                 +K++  G+RR+ S G  + +     G+  G S +   PP  +L RFRS R+ SC
Sbjct: 61  AEKSCGLKTQRNGHRRHVSMGDFSMRYSSADGMKTGASPT---PPAPKLKRFRSHRMFSC 111

[Close]

BLAST of MELO3C008506 vs. NCBI nr
Match: gi|567899076|ref|XP_006442026.1| (hypothetical protein CICLE_v10022922mg [Citrus clementina])

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-09
Identity = 50/123 (40.65%), Postives = 63/123 (51.22%), Query Frame = 1


Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADF-----------YVD 60
           MDGLIPM ++A+KKN+ RRQY  LS+          A+ S+N ADF           YV 
Sbjct: 1   MDGLIPMVFKAIKKNKTRRQYECLSS---------GAAQSYNAADFNSNIIAHQNSMYVT 60

Query: 61  PPSIKSE-GRGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPP--EQQLVRFRSQRILSC 110
               K E G G+RR+ S G         +G   G     G PP   +QLVRFRS R+ SC
Sbjct: 61  RSGEKMEPGHGHRRHKSVGDFYAGYSVANGGGFGGGGGGGSPPPRAKQLVRFRSHRMFSC 114

[Close]

BLAST of MELO3C008506 vs. NCBI nr
Match: gi|255585307|ref|XP_002533352.1| (PREDICTED: uncharacterized protein LOC8261699 [Ricinus communis])

HSP 1 Score: 69.7 bits (169), Expect = 3.6e-09
Identity = 44/121 (36.36%), Postives = 68/121 (56.20%), Query Frame = 1


Query: 1   MDGLIPMFYRAMKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVD--------PPS 60
           M+GL+P+ Y+A+K+NR RRQY  LS+          A+ ++N ADFY+         P S
Sbjct: 1   MEGLLPLVYKAIKRNRTRRQYECLSS---------GAAFAYNPADFYISDAETTYTKPSS 60

Query: 61  IKSE----GRGYRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILSCLT 110
           I  E    G G  + +    S+ ++   +G ++ +  +   PP +QLVRFRSQR+ SC+T
Sbjct: 61  IIMEKNNAGTGRSKLHRRSYSSVEDLSVTG-SSRRRTAGASPPRKQLVRFRSQRMFSCVT 111

The following BLAST results are available for this feature:

BLAST of MELO3C008506 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL24_CUCSA	4.6e-51	92.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123040 PE=4 SV=1	[more]
A0A061EPK1_THECC	5.1e-10	37.40	Uncharacterized protein OS=Theobroma cacao GN=TCM_021536 PE=4 SV=1	[more]
V4TZC8_9ROSI	8.7e-10	40.65	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022922mg PE=4 SV=1	[more]
B9T533_RICCO	2.5e-09	36.36	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0211550 PE=4 SV=1	[more]
M5W644_PRUPE	4.3e-09	36.84	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026279mg PE=4 SV=1	[more]

BLAST of MELO3C008506 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44010.1	2.7e-10	40.35	unknown protein	[more]
AT3G59880.1	1.2e-07	30.08	unknown protein	[more]

BLAST of MELO3C008506 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082088\|ref\|XP_008441665.1\|	3.0e-56	100.00	PREDICTED: uncharacterized protein LOC103485749 [Cucumis melo]	[more]
gi\|449442349\|ref\|XP_004138944.1\|	6.5e-51	92.73	PREDICTED: uncharacterized protein LOC101210346 [Cucumis sativus]	[more]
gi\|590627599\|ref\|XP_007026483.1\|	7.3e-10	37.40	Uncharacterized protein TCM_021536 [Theobroma cacao]	[more]
gi\|567899076\|ref\|XP_006442026.1\|	1.2e-09	40.65	hypothetical protein CICLE_v10022922mg [Citrus clementina]	[more]
gi\|255585307\|ref\|XP_002533352.1\|	3.6e-09	36.36	PREDICTED: uncharacterized protein LOC8261699 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU45458	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008506T1	MELO3C008506T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU45458	MU45458	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35485	FAMILY NOT NAMED	coord: 2..110 score: 2.2
None	No IPR available	PANTHER	PTHR35485:SF1	EXPRESSED PROTEIN	coord: 2..110 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C008506	Csa2G123040	Cucumber (Chinese Long) v2	cumeB143
MELO3C008506	Cla000856	Watermelon (97103) v1	mewmB442
MELO3C008506	ClCG06G009780	Watermelon (Charleston Gray)	mewcgB391
MELO3C008506	Cla97C06G119300	Watermelon (97103) v2	mewmbB392
MELO3C008506	Bhi12G001187	Wax gourd	mewgoB448
MELO3C008506	CSPI02G08860	Wild cucumber (PI 183967)	cpimeB133
MELO3C008506	Cucsa.266140	Cucumber (Gy14) v1	cgymeB445
MELO3C008506	CmaCh15G014430	Cucurbita maxima (Rimu)	cmameB277
MELO3C008506	Cp4.1LG13g00020	Cucurbita pepo (Zucchini)	cpemeB173
MELO3C008506	CsGy2G009140	Cucumber (Gy14) v2	cgybmeB114
MELO3C008506	Carg19743	Silver-seed gourd	carmeB0845
MELO3C008506	CsaV3_2G011240	Cucumber (Chinese Long) v3	cucmeB135

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C008506	Cucurbita moschata (Rifu)	cmomeB268