CsaV3_2G011240 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGAAGCATGAAGTGATTTAGGTGAATTCCACCAAAAAGGAAAAGGAAAGTCAGTCAGCTGATGGCTTTGTTTTAATTATTGCATTCAAAATAAGTAAAAATAAAAATTCAGAATGACGTGTAGGACTTAGTTTCCCCAACAAGGAATGAATTTGCATCTAAAATAAAATAAAGAAACAAACAAGAAATTGCATAGTGGTCAGGTCAGTACCCAATTAAATATATACCCCAAAACCAAACCCAACCAAACACACCTTTCAATACAATTACAAAAATAAAATAAAAATAAAAAAACCAAAAACCTCTGTTTTTCTTCAAAGAAAGCAAAAAAGGAAATGGATGGTTTGATTCCATTGTTCTACAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAGTATACAGTGCTTTCCACAAAAGCAGAATCAGAAGCAGAAACGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCCCCTTCAATCAAATCTGAGGGCAGGGCTTACCGGAGATACAACTCATACGCCGGATCTACCACTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGTAGTCATGGGCCACCACCGGAACAACAGCTTGTGAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGCCATTAAAATTTGTAAGGGCTTATTCTTCCAAACTTAAGATTAATGGATGTGTACAGCATAATTATTATTCATCTTCAAACCATACTTGATGTTGATACTCTTCAAAGCTTCTGCTTTAATTCAAATTTTGTGCTTTTCTTTTTGGTTGTTGTTATGTATTGCAAAGTTGGTCAAATGGAGATTGGTGGACAAAGTTATGTTATTTGACTTCTTGTGATTCATGAGCTGTAATGAGAAATAATCAAATAAATCAACAACCCATTACTCTACTTTTGTTTTATTCATCTTGTCTAAGTTCTTCCTCTTTTTTCCTTTTTTAAATTTTATTCATCTTGTCTAAGTTCTTCCTCTTTTTTCCTTTTTTAAATATTTCCTTGCCTTCTAAACCCATCTTTATTACTAATATGGTTTTATAACTTTTTTTTATAAACTAATATTTTCAACATGATAATGCTTTCAACTATAATTCTCAAACTTATTAGTAGCATTCATTTTTAGAATTCTTATTACTTTTTATTTCTATTTCCACCCCTACGAAATTTGAATTTAATAATAAATTTTGGTAAAAGTTTTCTGCATATTTTGGGTCCTTAAAGTGGTTCTAAAGTTAGAGTCATTTATAACACATTGGAACAAAAAAAATGTTATTAAAATTGTTTATATGACACTTATTTAATGTCGCTTGTGAAGTGATCTTGACCTTTAGCAACTATCACTGTTAATTTAGATTTGGACACAATGTATTTGTCATTGTTTAGGTTCAAATTGGTTTGTTTGTGTAACTTTTTTTCTAGTTGGCAACACCTTTTTAGTGTCATTTCATTTCATATCACATTATGATTTAACAATCATGTCAATGCTAAATTCTACGCTATTGTCTTCTCAATAAAATCCAAATTTTGATTATCAACATGTGTGCTTACATTGTCATTTTCATATAATTTAAAGAATGAAGTAGTCATATAAAAATAAAATTTGTACAAATATAAATTTCAACTTATATACATATGAACAAAGTTGATAACATTTTAACAAAGAAACTGTCGAACATCCCCAAACGGGCAAATACAAGCAAACTACTTGTAACGTCTCGAGTTTAGGAGGAGAGACATAAATGAACCGGTATCACATCTGAATGAGAGATATCTTGAGGACATGAAAGTAAGGTTAAGAAAGACTTAAAAGGAGTTTTAAAGTTTCTATATATACCAACAAGGTGTACATTTCTTTTCAGTGGCTCAATCATAGAAACTCCAAAGTCAAGCGTGTTTAGCTTAGAGCAATTTTATGTTGGGTGACCTTCAGAGAATTTTTCGAATATGCATGTGAGTGAGAACAAAACATGCTTAAAGGACTCATATGTTGGTTTGTCAAGATGATTTCCACTCTAATAAACCTTTGAGACAAGTAAGAAT ATGGATGGTTTGATTCCATTGTTCTACAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAGTATACAGTGCTTTCCACAAAAGCAGAATCAGAAGCAGAAACGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCCCCTTCAATCAAATCTGAGGGCAGGGCTTACCGGAGATACAACTCATACGCCGGATCTACCACTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGTAGTCATGGGCCACCACCGGAACAACAGCTTGTGAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGCCATTAA ATGGATGGTTTGATTCCATTGTTCTACAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAGTATACAGTGCTTTCCACAAAAGCAGAATCAGAAGCAGAAACGGAAGCAGCTTCTTTATCTTTCAACATTGCTGATTTCTATGTGGATCCCCCTTCAATCAAATCTGAGGGCAGGGCTTACCGGAGATACAACTCATACGCCGGATCTACCACTCAGGAGTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGTAGTCATGGGCCACCACCGGAACAACAGCTTGTGAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGCCATTAA MDGLIPLFYRAMKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPSIKSEGRAYRRYNSYAGSTTQEWRRSGVAAGKSSSHGPPPEQQLVRFRSQRILSCLTGH
BLAST of CsaV3_2G011240 vs. NCBI nr
Match: XP_004138944.1 (PREDICTED: uncharacterized protein LOC101210346 [Cucumis sativus] >KGN61442.1 hypothetical protein Csa_2G123040 [Cucumis sativus]) HSP 1 Score: 221.5 bits (563), Expect = 1.5e-54 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CsaV3_2G011240 vs. NCBI nr
Match: XP_008441665.1 (PREDICTED: uncharacterized protein LOC103485749 [Cucumis melo]) HSP 1 Score: 199.1 bits (505), Expect = 7.7e-48 Identity = 99/110 (90.00%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of CsaV3_2G011240 vs. NCBI nr
Match: XP_022969943.1 (uncharacterized protein LOC111468990 [Cucurbita maxima]) HSP 1 Score: 126.3 bits (316), Expect = 6.3e-26 Identity = 76/119 (63.87%), Postives = 84/119 (70.59%), Query Frame = 0
BLAST of CsaV3_2G011240 vs. NCBI nr
Match: XP_022929072.1 (uncharacterized protein LOC111435769 [Cucurbita moschata]) HSP 1 Score: 102.8 bits (255), Expect = 7.5e-19 Identity = 68/120 (56.67%), Postives = 75/120 (62.50%), Query Frame = 0
BLAST of CsaV3_2G011240 vs. NCBI nr
Match: XP_023551320.1 (uncharacterized protein LOC111809172 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 95.1 bits (235), Expect = 1.6e-16 Identity = 65/122 (53.28%), Postives = 72/122 (59.02%), Query Frame = 0
BLAST of CsaV3_2G011240 vs. TAIR10
Match: AT2G44010.1 (unknown protein) HSP 1 Score: 59.3 bits (142), Expect = 1.7e-09 Identity = 41/113 (36.28%), Postives = 64/113 (56.64%), Query Frame = 0
BLAST of CsaV3_2G011240 vs. TAIR10
Match: AT3G59880.1 (unknown protein) HSP 1 Score: 53.9 bits (128), Expect = 7.3e-08 Identity = 38/125 (30.40%), Postives = 69/125 (55.20%), Query Frame = 0
BLAST of CsaV3_2G011240 vs. TrEMBL
Match: tr|A0A0A0LL24|A0A0A0LL24_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123040 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 9.6e-55 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CsaV3_2G011240 vs. TrEMBL
Match: tr|A0A1S3B4K9|A0A1S3B4K9_CUCME (uncharacterized protein LOC103485749 OS=Cucumis melo OX=3656 GN=LOC103485749 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 5.1e-48 Identity = 99/110 (90.00%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of CsaV3_2G011240 vs. TrEMBL
Match: tr|B9T533|B9T533_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0211550 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.7e-09 Identity = 47/123 (38.21%), Postives = 70/123 (56.91%), Query Frame = 0
BLAST of CsaV3_2G011240 vs. TrEMBL
Match: tr|A0A2N9IN64|A0A2N9IN64_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53482 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.0e-08 Identity = 46/123 (37.40%), Postives = 66/123 (53.66%), Query Frame = 0
BLAST of CsaV3_2G011240 vs. TrEMBL
Match: tr|A0A061EPK1|A0A061EPK1_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_021536 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.8e-08 Identity = 45/123 (36.59%), Postives = 64/123 (52.03%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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