CmaCh12G011390 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G011390
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Calcium-responsive transcription coactivator
Location	Cma_Chr12 : 8964082 .. 8968927 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAATGCATTTTCTGTTTGTGTAATTTGCAGAAGCTCTGCTACCTTCCTCTGTCACTATCACCGTCCAAACCCCCTCTCCCTTCCCTCTCTGTTTCAAAACCCCAAAGAAGAAGAGAAGAAAATCAGCCGTTTCTTTGAAAACCCATCATTCATTTCTCTCTAATGCAACAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATCCCAACAACGTCACTACTGATCATATTCAACAGGTTCTTCTTCTTTTTCTTCCTTTTTTTTTTCACTTTTTCCATCTGGGTTTTCCTTGTTCTTCATGTTTTTTAATCTCTTTCATGTGGGTTTTCCTTGTTTTTCATGTTTGAGATGATTCATAACAGGTTCTTCTTCTTCTTCTTCCAATGTTTTGATTTCTTTCATGTGGGTTTTCCTTGTTTTTTATGTTAGAGATGATTCATAGTATGTTCTTCTTCTTCTTCCTCCATTTTTTATGATCTCTTTCATGTGGGTTTTCCTTGTTTTTCATGTTAGAAATGATTCATAACAGGTTCTTCTTCTTCTTCTTCCATTGTTTTGATCTCTTTCATGTGGGTTTTCCTTGTTCTTCATGTTAGAGATGATTCATAACTTGTTTTTCATTGTTTTTAATCTCTTTTATGTGGGTTTTCCTTGTTCTTCATGTTAAAGATGATTCATAAGAATGTCTTGCTTCCTTTATCCTATTGGGTTTAATTGTGTTGCCTATTTCACGTGCTCTTGTCTCTATTGACTGATTTTAATATCTAATACCAAAAGGTGAGACCAGTCCATCAATGGCTTTTCTCTTGTTTATTTCCATCTCTTTTCCTGATTAAGTATTTGTTTCCTTATTGGTCAAAGCTTAATTACTTTTTGTCTTTCAATTCCATGATTGATTTCTGAACCCTTTTGGCCTTAATCTTAATGGGAAAAGGAATCAGAACTGGTTGGATGGTGCATTTTTTCCCCTTTTCTTCTCTCTCTCTGTTCATCAAGTGGACCAAAAAGTGGCTCATGAAACTGTTGAGAGCTTGAGCTTTTGAGGACTATAAGGTTAATTTAAGGTTTTGGATTTTATGTTCTTTCATGTTCGTCTAAACTTGTTGTAAATGAATGTACCATATAGAAGTTCTTAACTAAGATTTATGTTTTTGGAAAAAGGGATTCTTTAGAAAGAAAATAATAGCTTTTCTTTGGGACTATGAATGTGATATCAGCTTCATTAATTACTAGAAATCTTGATTCAAATTGTTTGTGAGATTCCACATCGGTTGGGGAGGAGAACCAAAGACTCTTTATAAGGGTATGAAAACCTCTCCCAAGCAAACACGTATTAAAATCCATGAGGAAAGTTCAAAAGAAAAAACCCAAAGAGGACAATATTTGCTAGTCGTGGGCTTGGGCCGTTACAAATGGTATCAGAGTTAGACACGGGGCGATGTGCCAGCAAGGAGGCTGTTCCCCGAAAGGGGTTAGACACGAGGCGGTGTGTTAGTAAGGACGCTGGCCCCGAATGGGGGTGGATTTGGTGGGGGTCCCACATCGATTGGAGAAAGAAATGAGTGCCAGCGAGGACGTTGGACTCTGAAGGGGGGTGGGATTGTAAGATCCCACCTCGGTTGGGGAGGAGGGGTGGAAAAAAAAACGTTTTGGCCGTTACATTATTCTTTTAGTTTATAAACTTCTTTGATGAGGTTTCTTAAGAAAATTATTCATGAATTTTGGCCGGAATTCATATAATCTCACTGGAATTGACCAAGATTCAAGTGATTTTTTGGTATTTTTTAACAGTTTTGTGATGAACTATAATGAGGATAATGTTAAAACAGTCTACATCAGTAAAAAGTGTTTATAATGGAAGACAGAAGAGCTTGAATAGTGATTGGTCAACCATGAAACAGTATTATAGGTTGCCGTCTGGTTCTGTCTGTGTTTCAGCTCATGTTTTTTAAGGTTTATGATGTCTTATTTGATCATCTATGTTGCAGTATCTGGACGAGAACAAGTCGCTGATATTGAAGATTGTTGAGAGCCAAAACTCGGGAAAATTGAATGAATGTGCAGAGTAAGTATATTATGGTAGAATCATGGTGATAAATGTGAATTTTCTTTTTCGGTTTCATCAATTTGGTTCGTATGATGAAGAAACAGGGTAAGTATATCAAGCTTTCCCTTCTGGCTTCCCCCAAGGTTTTAAAACGCATCTGCTTGGAAGAGGTTTTCTCACCCTTATAAGGAATGCTTCGTTCCGATGTGGGATCTCACAATCCACGCTCCAGGAGCCCAGCGTCCTCGTTGACATACCGCTCGGTGTCTAGCTTTGATATATTTGCAATAGCTCAAGCCCACAACTAGCAGATATTGTTCTCTTTAGGTTTTCCGTTCTAAGCTTTCCCTCGATGTTTTAAAACGTGTCTATAGGGAGAGGTTTCCACACTCTTATAAGAAATGTTTCGTTCTCCTCTCCAACCGATGTGGATTTCTTCCCTTGGAGGCTTAGCGTCCTCGCTTGCACACCACCTAGTGTCTGGCTATGCACACCGTTCAGAATCTGGCTATGATACCATTTGTTGCCCAAACTCACTGCTAGTAGATATTGTTCTCTTTGGACTTTTTCTTTAGTGCTTCCAAGATTTTAAAACACGTTTGCTAGTGAGAGGTTCCCACACGCTTATAAGAAATGTTTAGTTTCCCTCTACAATGTGACATCTCACAATCCACTCCCTTTGGGGGCCCAGCATCCTAGATGGCACACCGCCTAGTGTTTGGTTCTGATACCATTTGTAACAGCTCAAACCCACCGGTAGCCGATATTGTCCTCTTTGGACTTTCCCTTCTGGGCTTTTGGGCTTCTTCTCAATGTTTTAGAATGTGTCTGCTAGGGAGAAATTTTTATACCCTTATACGAAATGCTTCGTTCTCTTTTCTAACTAATATGGAATCTCATACATATATGACAATCATGTATTGAAAAGTTGATCGAGAGTCAAAACTAACCCTAATATTGCTTAAATATTGCTTAAACAATGTTTTGAGGCTGAAAACGAAGGTGTTGAAGAACAAAAGTAATTCTGATATCTTTTCCTGTGCAGGAATCAAGCAAGGCTACAGAGGAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGGTATGAACATAGTTAGCCGTGTTTTGTTTGGCTGATGATCATTTGGGGAGGTTTTGTCTAACTTTAAGTCGGTTACAAATTTAGCAGCTTGAATCTTGGACTTTAGAATGTAATATGTAATATTGTCCGCTTTGGCGCGTTATGTATTTCCGTCAACCTCACGATTTTAGAACGTGTCTAGCTGACGGCTATACGTAACGGGCTAAAATAGACAATATCTGCTAATGGTGGGCTTGAGCTGTTCCAAATGGTGTGAGAGCTAGACACCGGATGGTGTGCCAGTGATTACGTTGGCCCCCAATGGGGGTGGATTGTGAGATCCCATTTCGGTTGGAGAGAAGAACAAACGAAGCATTGCTTATGAACTTTTCCTTATCAAATGCGTTTTAAAGCCTTGAGGGGAAGCTTAGAAGGGAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGTTTGAGCTGTTCCAAATGGTATTAGAGCCAGACACAAGGCGGTGTGTCAGCGAGGATGTTAGGCCTCCAATGGGGGTGGATTGTGAGATTCCACATCGGTTGGAGAGAGGAACAAATGAAGCATTCCTAATGAACTTTTTCTTGACAAACGCGTTTTAAAGCCTTGAGGGGAATCTCATAAGGGAAAGCCCAAAGTGGACAATATCTGCGAGTGTTGAGTTTGAGCTGTTCCAAATGGTATTAGAGCCAGACACACAGGGTGGTATGTCAGCAAGGACGTTGGGCCCCTAAGGAGGGTGGATTTGCGAGATCCTACATTGACTCGAGAGGGGAACGAAACATTCATTCTAAGGGTGTGGAAACCTCTCTCTAGCATACGCGTTTTAAAGCCATGAGGCTGGCGATAGTACGGAATGGGCCAAAGCGGGCTTGGGATGTTCGTATATGTCAAAAAGTAAATTGAATTGAGATGAATCCAACATGTTTTGGTTTTGCCATGTTCTCTCCAGTACTCTTCTAGTGGCCTAATCCAACCAGGAGGACATTACATTCAACACCAACAAGCTCAGCAAATGACACCACAATCACTGATGGCTGCTCGGTCCTCCATGTTGTACACCCAACAGCCATTTTCTAGCCTACAGCAGCAAGCTTTACACAGCCAACTCGGGATGAGCTCCGGAGGTGGCATAGGATTCAACATGCTGCAAAACGATGCCGCCAATGCCGGAGGCAACGGAGGAGCACTTGGAGGAGGAGGATTCCCAGATTTCAGCCACAATGCTGCAGCTGATAGCTTGCACCGCAGCCTAGCTGGTGGGAGCAAGCAAGATATGGGAGGAACCGGGTCAGGCGAGGGACGTGGAGGGAGCTCCGGGAGCCATGGCGGAGATGGAGGTGAGACTCTCTACTTGAAATCAGCTGATGATGGTAACTGAAAGTATGAGAATAAAGTCGATAGAAATTAGGATGACAAAAGAAGAGAAGAAACCTTCTTACTGAAGAAGCACTTGCTTTATCTTATGAGTAAACAATGGTGTGAGGATTTGATCTTTGGTGTTCTTTTTCCAAGTTAAGGTATTTGTTTGTAGTGTATTATGTAAATTTTCTTCTCTTTCTTTTGTGCGTATGAGAAGTGGATGAACGAACGAATTGATATCATATTTGAATGAGAGTGATTCTAATCGAGACTATCTCGAGGAACAATTTTA

mRNA sequence

CATAATGCATTTTCTGTTTGTGTAATTTGCAGAAGCTCTGCTACCTTCCTCTGTCACTATCACCGTCCAAACCCCCTCTCCCTTCCCTCTCTGTTTCAAAACCCCAAAGAAGAAGAGAAGAAAATCAGCCGTTTCTTTGAAAACCCATCATTCATTTCTCTCTAATGCAACAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATCCCAACAACGTCACTACTGATCATATTCAACAGTATCTGGACGAGAACAAGTCGCTGATATTGAAGATTGTTGAGAGCCAAAACTCGGGAAAATTGAATGAATGTGCAGAGAATCAAGCAAGGCTACAGAGGAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGTACTCTTCTAGTGGCCTAATCCAACCAGGAGGACATTACATTCAACACCAACAAGCTCAGCAAATGACACCACAATCACTGATGGCTGCTCGGTCCTCCATGTTGTACACCCAACAGCCATTTTCTAGCCTACAGCAGCAAGCTTTACACAGCCAACTCGGGATGAGCTCCGGAGGTGGCATAGGATTCAACATGCTGCAAAACGATGCCGCCAATGCCGGAGGCAACGGAGGAGCACTTGGAGGAGGAGGATTCCCAGATTTCAGCCACAATGCTGCAGCTGATAGCTTGCACCGCAGCCTAGCTGGTGGGAGCAAGCAAGATATGGGAGGAACCGGGTCAGGCGAGGGACGTGGAGGGAGCTCCGGGAGCCATGGCGGAGATGGAGGTGAGACTCTCTACTTGAAATCAGCTGATGATGGTAACTGAAAGTATGAGAATAAAGTCGATAGAAATTAGGATGACAAAAGAAGAGAAGAAACCTTCTTACTGAAGAAGCACTTGCTTTATCTTATGAGTAAACAATGGTGTGAGGATTTGATCTTTGGTGTTCTTTTTCCAAGTTAAGGTATTTGTTTGTAGTGTATTATGTAAATTTTCTTCTCTTTCTTTTGTGCGTATGAGAAGTGGATGAACGAACGAATTGATATCATATTTGAATGAGAGTGATTCTAATCGAGACTATCTCGAGGAACAATTTTA

Coding sequence (CDS)

ATGCAACAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATCCCAACAACGTCACTACTGATCATATTCAACAGTATCTGGACGAGAACAAGTCGCTGATATTGAAGATTGTTGAGAGCCAAAACTCGGGAAAATTGAATGAATGTGCAGAGAATCAAGCAAGGCTACAGAGGAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGTACTCTTCTAGTGGCCTAATCCAACCAGGAGGACATTACATTCAACACCAACAAGCTCAGCAAATGACACCACAATCACTGATGGCTGCTCGGTCCTCCATGTTGTACACCCAACAGCCATTTTCTAGCCTACAGCAGCAAGCTTTACACAGCCAACTCGGGATGAGCTCCGGAGGTGGCATAGGATTCAACATGCTGCAAAACGATGCCGCCAATGCCGGAGGCAACGGAGGAGCACTTGGAGGAGGAGGATTCCCAGATTTCAGCCACAATGCTGCAGCTGATAGCTTGCACCGCAGCCTAGCTGGTGGGAGCAAGCAAGATATGGGAGGAACCGGGTCAGGCGAGGGACGTGGAGGGAGCTCCGGGAGCCATGGCGGAGATGGAGGTGAGACTCTCTACTTGAAATCAGCTGATGATGGTAACTGA

Protein sequence

MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQPFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGFPDFSHNAAADSLHRSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN

Homology

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BLAST of CmaCh12G011390 vs. Swiss-Prot
Match: GIF1_ARATH (GRF1-interacting factor 1 OS=Arabidopsis thaliana GN=GIF1 PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.2e-61
Identity = 155/240 (64.58%), Postives = 172/240 (71.67%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMA YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSS--GLIQ--PGGHYIQHQQA---QQMTPQSLMAARS 120
           NLMYLAAIADSQPQP ++H+QY S+  G+IQ   G HY+Q QQA   QQMT QSLMAARS
Sbjct: 61  NLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARS 120

Query: 121 SMLYT-----QQPFSSLQQQAL-HSQLGMSS----GGGIGFNMLQNDAANAGGNGGALGG 180
           SMLY      QQP+++LQ Q L HSQLGMSS    GG  G ++LQ +A            
Sbjct: 121 SMLYAQQQQQQQPYATLQHQQLHHSQLGMSSSSGGGGSSGLHILQGEA------------ 180

Query: 181 GGFPDFSHNAAADSLHRSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 224
           GGF DF              G  K +MG  G GEGRGGSS    GDGGETLYLKS+DDGN
Sbjct: 181 GGFHDF--------------GRGKPEMGSGGGGEGRGGSS----GDGGETLYLKSSDDGN 210

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BLAST of CmaCh12G011390 vs. Swiss-Prot
Match: GIF2_ARATH (GRF1-interacting factor 2 OS=Arabidopsis thaliana GN=GIF2 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.6e-19
Identity = 80/183 (43.72%), Postives = 105/183 (57.38%), Query Frame = 1


Query: 2   QQHLMQMQPMMAAYYP-NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 61
           QQ   QM PM+ +  P NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQK 62

Query: 62  NLMYLAAIADSQPQP--------SAMHAQYSS--SGLIQPGGHYIQHQQAQQMTPQSLMA 121
           NLMYLAAIAD+QP P        +A+ AQ ++  SG+ QP  +++QH QA   +P  + A
Sbjct: 63  NLMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGM-QPPSYFMQHPQA---SPAGIFA 122

Query: 122 AR-----SSMLYTQQPFSSLQ--QQALHSQLGMSSGGGIGFNM---LQNDAANAGGNGGA 164
            R      S L  Q P    Q  QQA+   +G+   G     M   +Q      GGN G 
Sbjct: 123 PRGPLQFGSPLQFQDPQQQQQIHQQAMQGHMGIRPMGMTNNGMQHAMQQPETGLGGNVGL 181

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BLAST of CmaCh12G011390 vs. Swiss-Prot
Match: GIF3_ARATH (GRF1-interacting factor 3 OS=Arabidopsis thaliana GN=GIF3 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.0e-16
Identity = 87/242 (35.95%), Postives = 116/242 (47.93%), Query Frame = 1


Query: 3   QHLMQMQPMMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 62
           Q   QM PM+   +P  NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 2   QQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQK 61

Query: 63  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 122
           NLMYLAAIAD+QPQP A      +SG + P      +  + Q  P   M    ++   QQ
Sbjct: 62  NLMYLAAIADAQPQPPAATL---TSGAMTPQA-MAPNPSSMQPPPSYFMQQHQAVGMAQQ 121

Query: 123 -------PFSSLQ----------QQALHSQ----------LGMSSGGGIGFNMLQNDAAN 182
                  P   LQ          QQ LH Q          +G+++  G+   M  ++ A 
Sbjct: 122 IPPGIFPPRGPLQFGSPHQFLDPQQQLHQQAMQGHMGIRPMGLNNNNGLQHQMHHHETAL 181

Query: 183 AGGNGGA--LGGGGFPDFSHNAAADSLHRSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGG 214
           A  N G     GGG PD                G+     G    +G+GGS+  HGG   
Sbjct: 182 AANNAGPNDASGGGKPD----------------GTNMSQSG---ADGQGGSAARHGGGDA 220

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BLAST of CmaCh12G011390 vs. Swiss-Prot
Match: S18L2_HUMAN (SS18-like protein 2 OS=Homo sapiens GN=SS18L2 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-06
Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 1


Query: 11 MMAAYYPN------NVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMY 70
          M  A+ P+       V  + IQ+ L+EN  LI  IVE QN G+ NEC + Q  L RNL+Y
Sbjct: 1  MSVAFVPDWLRGKAEVNQETIQRLLEENDQLIRCIVEYQNKGRGNECVQYQHVLHRNLIY 60

Query: 71 LAAIADSQP 74
          LA IAD+ P
Sbjct: 61 LATIADASP 69

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BLAST of CmaCh12G011390 vs. Swiss-Prot
Match: S18L2_MOUSE (SS18-like protein 2 OS=Mus musculus GN=Ss18l2 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.8e-06
Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 1


Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADS 72
          V  + IQ+ L+EN  LI  IVE QN G+ NEC + Q  L RNL+YLA IAD+
Sbjct: 16 VNQETIQRLLEENDQLIRCIVEYQNKGRANECVQYQHVLHRNLIYLATIADA 67

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BLAST of CmaCh12G011390 vs. TrEMBL
Match: A0A0A0LL92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010170 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 8.1e-108
Identity = 214/224 (95.54%), Postives = 218/224 (97.32%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANA-GGNGGALGGGGFPDFSHNAAADSLH 180
           PFS+LQQQALH QLGMSSGGGIGFNMLQNDAANA GGNGGALGGGGFPDF H AA+DSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 224
           RSLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of CmaCh12G011390 vs. TrEMBL
Match: A0A061F2S4_THECC (SSXT family protein isoform 1 OS=Theobroma cacao GN=TCM_026261 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.7e-89
Identity = 184/226 (81.42%), Postives = 204/226 (90.27%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP  MHAQ+ SSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ
Sbjct: 61  NLMYLAAIADSQPQPPNMHAQFPSSGIMQPGGHYMQHQQAQQMTPQSLMAARSSMLYAQQ 120

Query: 121 PFSSL-QQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGFPDFSHNAAADSLH 180
           PFS+L QQQALHSQLGMSSGG  G +MLQ++A+ AGG+ GALG GGFPDF   ++ + +H
Sbjct: 121 PFSALQQQQALHSQLGMSSGGNTGLHMLQSEASTAGGS-GALGAGGFPDFGRGSSGEGMH 180

Query: 181 --RSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 224
             R++AGGSKQD+G +GS EGRGGSSG  GGDGGETLYLK+ADDGN
Sbjct: 181 AGRAMAGGSKQDIGSSGSAEGRGGSSGGQGGDGGETLYLKAADDGN 225

[Close]

BLAST of CmaCh12G011390 vs. TrEMBL
Match: W9RHN8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024545 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 2.5e-88
Identity = 181/223 (81.17%), Postives = 195/223 (87.44%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP  MHAQY SS ++QPG HY+QHQQAQQMTPQSLMAARSSMLYTQQ
Sbjct: 61  NLMYLAAIADSQPQPPTMHAQYPSSSMMQPGAHYMQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGFPDFSHNAAADSLHR 180
           PF +LQQQALH QLGMSSGG  G +M+Q D  +AGG+ G LG GGFPDF   +A + LHR
Sbjct: 121 PFPALQQQALHGQLGMSSGGSSGLHMMQGDIGSAGGS-GQLGAGGFPDFGRGSAGEGLHR 180

Query: 181 SLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 224
            +AGGSKQD+G +GS EGRGGSS    GDGGETLYLKSADDGN
Sbjct: 181 GMAGGSKQDIGSSGSAEGRGGSS----GDGGETLYLKSADDGN 218

[Close]

BLAST of CmaCh12G011390 vs. TrEMBL
Match: A0A061F252_THECC (SSXT family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_026261 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 4.2e-88
Identity = 184/227 (81.06%), Postives = 204/227 (89.87%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQ-QYLDENKSLILKIVESQNSGKLNECAENQARLQ 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQ QYLDENKSLILKIVESQNSGKL+ECAENQARLQ
Sbjct: 57  MQQHLMQMQPMMAAYYPNNVTTDHIQQQYLDENKSLILKIVESQNSGKLSECAENQARLQ 116

Query: 61  RNLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQ 120
           RNLMYLAAIADSQPQP  MHAQ+ SSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY Q
Sbjct: 117 RNLMYLAAIADSQPQPPNMHAQFPSSGIMQPGGHYMQHQQAQQMTPQSLMAARSSMLYAQ 176

Query: 121 QPFSSL-QQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGFPDFSHNAAADSL 180
           QPFS+L QQQALHSQLGMSSGG  G +MLQ++A+ AGG+ GALG GGFPDF   ++ + +
Sbjct: 177 QPFSALQQQQALHSQLGMSSGGNTGLHMLQSEASTAGGS-GALGAGGFPDFGRGSSGEGM 236

Query: 181 H--RSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 224
           H  R++AGGSKQD+G +GS EGRGGSSG  GGDGGETLYLK+ADDGN
Sbjct: 237 HAGRAMAGGSKQDIGSSGSAEGRGGSSGGQGGDGGETLYLKAADDGN 282

[Close]

BLAST of CmaCh12G011390 vs. TrEMBL
Match: B9S7I1_RICCO (Synovial sarcoma associated ss18 protein, putative OS=Ricinus communis GN=RCOM_0608010 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 4.3e-85
Identity = 178/224 (79.46%), Postives = 199/224 (88.84%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGK++ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKISECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP  MH+Q+SSSG++QPG HY+QHQQAQQMTPQS+MAARSSMLYTQQ
Sbjct: 61  NLMYLAAIADSQPQPPNMHSQFSSSGIMQPGAHYMQHQQAQQMTPQSVMAARSSMLYTQQ 120

Query: 121 PFSSL-QQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGFPDFSHNAAADSLH 180
            +++L QQQALHSQLGMSSGG  G +MLQ++A+ AGG+GG LG GGFPDF  +A+     
Sbjct: 121 QYAALQQQQALHSQLGMSSGGSPGLHMLQSEASTAGGSGG-LGAGGFPDFGRDASG---- 180

Query: 181 RSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 224
           R +AGGSKQDMG  GSGEGRGG+SG  G DGGE LYLKSAD+GN
Sbjct: 181 RGMAGGSKQDMGNAGSGEGRGGNSGGQGSDGGENLYLKSADEGN 219

[Close]

BLAST of CmaCh12G011390 vs. TAIR10
Match: AT5G28640.1 (AT5G28640.1 SSXT family protein)

HSP 1 Score: 236.9 bits (603), Expect = 1.2e-62
Identity = 155/240 (64.58%), Postives = 172/240 (71.67%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMA YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSS--GLIQ--PGGHYIQHQQA---QQMTPQSLMAARS 120
           NLMYLAAIADSQPQP ++H+QY S+  G+IQ   G HY+Q QQA   QQMT QSLMAARS
Sbjct: 61  NLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARS 120

Query: 121 SMLYT-----QQPFSSLQQQAL-HSQLGMSS----GGGIGFNMLQNDAANAGGNGGALGG 180
           SMLY      QQP+++LQ Q L HSQLGMSS    GG  G ++LQ +A            
Sbjct: 121 SMLYAQQQQQQQPYATLQHQQLHHSQLGMSSSSGGGGSSGLHILQGEA------------ 180

Query: 181 GGFPDFSHNAAADSLHRSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 224
           GGF DF              G  K +MG  G GEGRGGSS    GDGGETLYLKS+DDGN
Sbjct: 181 GGFHDF--------------GRGKPEMGSGGGGEGRGGSS----GDGGETLYLKSSDDGN 210

[Close]

BLAST of CmaCh12G011390 vs. TAIR10
Match: AT4G00850.1 (AT4G00850.1 GRF1-interacting factor 3)

HSP 1 Score: 85.5 bits (210), Expect = 4.5e-17
Identity = 87/242 (35.95%), Postives = 116/242 (47.93%), Query Frame = 1


Query: 3   QHLMQMQPMMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 62
           Q   QM PM+   +P  NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 2   QQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQK 61

Query: 63  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 122
           NLMYLAAIAD+QPQP A      +SG + P      +  + Q  P   M    ++   QQ
Sbjct: 62  NLMYLAAIADAQPQPPAATL---TSGAMTPQA-MAPNPSSMQPPPSYFMQQHQAVGMAQQ 121

Query: 123 -------PFSSLQ----------QQALHSQ----------LGMSSGGGIGFNMLQNDAAN 182
                  P   LQ          QQ LH Q          +G+++  G+   M  ++ A 
Sbjct: 122 IPPGIFPPRGPLQFGSPHQFLDPQQQLHQQAMQGHMGIRPMGLNNNNGLQHQMHHHETAL 181

Query: 183 AGGNGGA--LGGGGFPDFSHNAAADSLHRSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGG 214
           A  N G     GGG PD                G+     G    +G+GGS+  HGG   
Sbjct: 182 AANNAGPNDASGGGKPD----------------GTNMSQSG---ADGQGGSAARHGGGDA 220

[Close]

BLAST of CmaCh12G011390 vs. TAIR10
Match: AT1G01160.2 (AT1G01160.2 GRF1-interacting factor 2)

HSP 1 Score: 79.0 bits (193), Expect = 4.2e-15
Identity = 80/217 (36.87%), Postives = 105/217 (48.39%), Query Frame = 1


Query: 2   QQHLMQMQPMMAAYYP-NNVTTDHIQQ--------------------------------- 61
           QQ   QM PM+ +  P NN+TT+ IQ+                                 
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKMLGGSGNFESGFQEWTLKLDACLMLLFCTFSWL 62

Query: 62  -YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP--------SAM 121
            YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QP P        +A+
Sbjct: 63  DYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAV 122

Query: 122 HAQYSS--SGLIQPGGHYIQHQQAQQMTPQSLMAAR-----SSMLYTQQPFSSLQ--QQA 164
            AQ ++  SG+ QP  +++QH QA   +P  + A R      S L  Q P    Q  QQA
Sbjct: 123 AAQMATPHSGM-QPPSYFMQHPQA---SPAGIFAPRGPLQFGSPLQFQDPQQQQQIHQQA 182

[Close]

BLAST of CmaCh12G011390 vs. NCBI nr
Match: gi|449442961|ref|XP_004139249.1| (PREDICTED: GRF1-interacting factor 1 [Cucumis sativus])

HSP 1 Score: 397.9 bits (1021), Expect = 1.2e-107
Identity = 214/224 (95.54%), Postives = 218/224 (97.32%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANA-GGNGGALGGGGFPDFSHNAAADSLH 180
           PFS+LQQQALH QLGMSSGGGIGFNMLQNDAANA GGNGGALGGGGFPDF H AA+DSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 224
           RSLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of CmaCh12G011390 vs. NCBI nr
Match: gi|659070713|ref|XP_008456296.1| (PREDICTED: GRF1-interacting factor 1 [Cucumis melo])

HSP 1 Score: 396.4 bits (1017), Expect = 3.4e-107
Identity = 213/224 (95.09%), Postives = 217/224 (96.88%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANA-GGNGGALGGGGFPDFSHNAAADSLH 180
           PFS+LQQQALH QLGMSSGGGIGFNMLQNDA NA GGNGGALGGGGFPDF H AA+DSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAGNAGGGNGGALGGGGFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 224
           RSLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of CmaCh12G011390 vs. NCBI nr
Match: gi|1009117529|ref|XP_015875366.1| (PREDICTED: GRF1-interacting factor 1 [Ziziphus jujuba])

HSP 1 Score: 344.4 bits (882), Expect = 1.5e-91
Identity = 187/224 (83.48%), Postives = 199/224 (88.84%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYI-QHQQAQQMTPQSLMAARSSMLYTQ 120
           NLMYLAAIADSQPQP  +HAQY SSG++QPG HY+ QHQQAQQMTPQSLMAARSSMLY+Q
Sbjct: 61  NLMYLAAIADSQPQPPTIHAQYPSSGIMQPGAHYMQQHQQAQQMTPQSLMAARSSMLYSQ 120

Query: 121 QPFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGFPDFSHNAAADSLH 180
           Q FS+LQQQALH QLGMSSGG  G +MLQ+D  NAGGN G LG GGFPDF   +A + LH
Sbjct: 121 QSFSTLQQQALHGQLGMSSGGSAGLHMLQSDTGNAGGN-GPLGTGGFPDFGRGSAGEGLH 180

Query: 181 RSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 224
           R +AGGSKQDMG  GS EGRGGSSG HGGDGGETLYLKSADDGN
Sbjct: 181 RGMAGGSKQDMGSAGSAEGRGGSSGGHGGDGGETLYLKSADDGN 223

[Close]

BLAST of CmaCh12G011390 vs. NCBI nr
Match: gi|590642355|ref|XP_007030495.1| (SSXT family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 337.0 bits (863), Expect = 2.4e-89
Identity = 184/226 (81.42%), Postives = 204/226 (90.27%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP  MHAQ+ SSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ
Sbjct: 61  NLMYLAAIADSQPQPPNMHAQFPSSGIMQPGGHYMQHQQAQQMTPQSLMAARSSMLYAQQ 120

Query: 121 PFSSL-QQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGFPDFSHNAAADSLH 180
           PFS+L QQQALHSQLGMSSGG  G +MLQ++A+ AGG+ GALG GGFPDF   ++ + +H
Sbjct: 121 PFSALQQQQALHSQLGMSSGGNTGLHMLQSEASTAGGS-GALGAGGFPDFGRGSSGEGMH 180

Query: 181 --RSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 224
             R++AGGSKQD+G +GS EGRGGSSG  GGDGGETLYLK+ADDGN
Sbjct: 181 AGRAMAGGSKQDIGSSGSAEGRGGSSGGQGGDGGETLYLKAADDGN 225

[Close]

BLAST of CmaCh12G011390 vs. NCBI nr
Match: gi|703121167|ref|XP_010102263.1| (hypothetical protein L484_024545 [Morus notabilis])

HSP 1 Score: 333.2 bits (853), Expect = 3.5e-88
Identity = 181/223 (81.17%), Postives = 195/223 (87.44%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP  MHAQY SS ++QPG HY+QHQQAQQMTPQSLMAARSSMLYTQQ
Sbjct: 61  NLMYLAAIADSQPQPPTMHAQYPSSSMMQPGAHYMQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGFPDFSHNAAADSLHR 180
           PF +LQQQALH QLGMSSGG  G +M+Q D  +AGG+ G LG GGFPDF   +A + LHR
Sbjct: 121 PFPALQQQALHGQLGMSSGGSSGLHMMQGDIGSAGGS-GQLGAGGFPDFGRGSAGEGLHR 180

Query: 181 SLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 224
            +AGGSKQD+G +GS EGRGGSS    GDGGETLYLKSADDGN
Sbjct: 181 GMAGGSKQDIGSSGSAEGRGGSS----GDGGETLYLKSADDGN 218

The following BLAST results are available for this feature:

BLAST of CmaCh12G011390 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GIF1_ARATH	2.2e-61	64.58	GRF1-interacting factor 1 OS=Arabidopsis thaliana GN=GIF1 PE=1 SV=1	[more]
GIF2_ARATH	4.6e-19	43.72	GRF1-interacting factor 2 OS=Arabidopsis thaliana GN=GIF2 PE=1 SV=1	[more]
GIF3_ARATH	8.0e-16	35.95	GRF1-interacting factor 3 OS=Arabidopsis thaliana GN=GIF3 PE=1 SV=1	[more]
S18L2_HUMAN	2.0e-06	46.38	SS18-like protein 2 OS=Homo sapiens GN=SS18L2 PE=3 SV=1	[more]
S18L2_MOUSE	5.8e-06	53.85	SS18-like protein 2 OS=Mus musculus GN=Ss18l2 PE=3 SV=1	[more]

BLAST of CmaCh12G011390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL92_CUCSA	8.1e-108	95.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010170 PE=4 SV=1	[more]
A0A061F2S4_THECC	1.7e-89	81.42	SSXT family protein isoform 1 OS=Theobroma cacao GN=TCM_026261 PE=4 SV=1	[more]
W9RHN8_9ROSA	2.5e-88	81.17	Uncharacterized protein OS=Morus notabilis GN=L484_024545 PE=4 SV=1	[more]
A0A061F252_THECC	4.2e-88	81.06	SSXT family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_026261 PE=4 S...	[more]
B9S7I1_RICCO	4.3e-85	79.46	Synovial sarcoma associated ss18 protein, putative OS=Ricinus communis GN=RCOM_0...	[more]

BLAST of CmaCh12G011390 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G28640.1	1.2e-62	64.58	SSXT family protein	[more]
AT4G00850.1	4.5e-17	35.95	GRF1-interacting factor 3	[more]
AT1G01160.2	4.2e-15	36.87	GRF1-interacting factor 2	[more]

BLAST of CmaCh12G011390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442961\|ref\|XP_004139249.1\|	1.2e-107	95.54	PREDICTED: GRF1-interacting factor 1 [Cucumis sativus]	[more]
gi\|659070713\|ref\|XP_008456296.1\|	3.4e-107	95.09	PREDICTED: GRF1-interacting factor 1 [Cucumis melo]	[more]
gi\|1009117529\|ref\|XP_015875366.1\|	1.5e-91	83.48	PREDICTED: GRF1-interacting factor 1 [Ziziphus jujuba]	[more]
gi\|590642355\|ref\|XP_007030495.1\|	2.4e-89	81.42	SSXT family protein isoform 1 [Theobroma cacao]	[more]
gi\|703121167\|ref\|XP_010102263.1\|	3.5e-88	81.17	hypothetical protein L484_024545 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007726	SS18_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009955	adaxial/abaxial pattern specification
biological_process	GO:0048366	leaf development
biological_process	GO:1903506	regulation of nucleic acid-templated transcription
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003713	transcription coactivator activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G011390.1	CmaCh12G011390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007726	SS18 family	PANTHER	PTHR23107	SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN	coord: 1..223 score: 6.3E
IPR007726	SS18 family	PFAM	PF05030	SSXT	coord: 19..76 score: 1.5
None	No IPR available	PANTHER	PTHR23107:SF6	GRF1-INTERACTING FACTOR 1	coord: 1..223 score: 6.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh12G011390	Cucsa.133040	Cucumber (Gy14) v1	cgycmaB0364
CmaCh12G011390	Cla013633	Watermelon (97103) v1	cmawmB170
CmaCh12G011390	Csa2G010170	Cucumber (Chinese Long) v2	cmacuB173
CmaCh12G011390	MELO3C004407	Melon (DHL92) v3.5.1	cmameB172
CmaCh12G011390	ClCG02G016890	Watermelon (Charleston Gray)	cmawcgB156
CmaCh12G011390	CSPI02G02710	Wild cucumber (PI 183967)	cmacpiB174
CmaCh12G011390	CmoCh05G012510	Cucurbita moschata (Rifu)	cmacmoB190
CmaCh12G011390	CmoCh12G011580	Cucurbita moschata (Rifu)	cmacmoB177
CmaCh12G011390	Lsi11G004190	Bottle gourd (USVL1VR-Ls)	cmalsiB159
CmaCh12G011390	Cp4.1LG11g10100	Cucurbita pepo (Zucchini)	cmacpeB171
CmaCh12G011390	Cp4.1LG07g09690	Cucurbita pepo (Zucchini)	cmacpeB203
CmaCh12G011390	MELO3C004407.2	Melon (DHL92) v3.6.1	cmamedB187
CmaCh12G011390	CsaV3_2G003880	Cucumber (Chinese Long) v3	cmacucB0202
CmaCh12G011390	Cla97C02G042620	Watermelon (97103) v2	cmawmbB175
CmaCh12G011390	CsGy2G002810	Cucumber (Gy14) v2	cgybcmaB178
CmaCh12G011390	Carg22999	Silver-seed gourd	carcmaB1483
CmaCh12G011390	Carg17432	Silver-seed gourd	carcmaB0355

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh12G011390	CmaCh05G012230	Cucurbita maxima (Rimu)	cmacmaB190

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh12G011390	Silver-seed gourd	carcmaB1074
CmaCh12G011390	Wax gourd	cmawgoB0177