Cp4.1LG11g10100 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g10100
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	GRF1-INTERACTING FACTOR 1 family protein
Location	Cp4.1LG11 : 8476755 .. 8480535 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAAAAAGGGGAAAAAAAAACATATATTCAAACAAAAATTGGATTTTCTCTCTCATCATCACTCACGTGACACCCTTTTGCCTCTAGAGTGAGAAAGAAGCACCAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAGGTTTTGCTCTGTTCCTTGGAGAGGGAAACAAGCAGCATCTTTGTAGAGAAGAACAGAGAAACCAGAATTCTCCAAAACCAAAACCCATTTTCTTCTCTCTCTTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGAAGCTGCTACAGCTCCCCTGTGTCACTATCACCGTCCAAACCCTTCTCTATTTCAAACCAGGGAAGAACAGAGAACTTTTCTTAAAGCAAAGGGCATCTTGAATCAGCCGTTTCTGTGAAAACCCATCATTCCTATTACTCAAATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCTGCCTATTATCCTAACAACGTCACTACTGATCACATTCAACAGGTTCCTCTTCTTCTTCTTCTTCTTCCTTTTTTATTTCTGTCTTTCAATCCATTTATCTTATTAATCCAACCCCATTTCCTGTTTTTCTTTCATTTCCCCTCTTTCTCTCAACTGGGTTTTCTTTGTTTTTCACTTATGGATGCTTTTCTTCTTTTAAATATTGGGTTTCTTCTTTCACGTGCCTTTGTCTCTACTGGATTATCTAATTACACGAGCTGAGACTAACCCATCTATGCCTTTCTTGTTTATTTTCATCTCTTTTCTTGATATTTAAGTGTTTGTTTCCTTGTTGGTCTAAAGTTAATCACTCTGTTTTTTGAAATTGCATGATTGATTTCTGCCTTTTGGCCTTAATCTTAATGGAAAAGGAAGCTGAACTGGTTGGATGGTGGCTTATTTATACTTTTTTGCCCCTCCCTAGCAATCAAGGGGAGCAAAAGTGGCTTGTTGGGATATGACATTTAAGAGCTTGAGCTTGATTTAGATGCTTGAAACCTCCCTCATATGAAACAGTTCAGAGCTTTGTTGTTGGGAGGGAGTCTACATTGGTTAATTTAGGGTAGGGAATGATCGTAAGGTATGTATCTCCATTGGTATGAGGCCTTTTGGTTGGAAACCCAAAGCAAAGTCATGAGAGCTTATGCTTGAAGTGGACAATATCATACCATTGTGGAGAGTCTTTATTCCTAACATGGTATTAGAGTCATGCTCTTAACTTAGCCATGTCAATAGGATCCTCAAATGTCGAACAAAGAAGTTGTGAGGCTCGAAAGTGTAGTCAAAAGTGACTCTAGTATCGAACAAATGGTGTATTTTGTTCAAGGACTCCAAAGAAGGGGTCGAGCCTCGATTAAGGGGAGACTTCGAGGGGAGGATTGTTGGGAGAGAGTCCCGCATTGGCTAATTTAAGGAATGATCATGTAAGGAATACATCTCTATTAGTAGAGGTCTTTTGGAGAAGCCTAAAGCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACTATTGTGGAAAGTCGTTATTCCTAACAAGCTTGAGCTCTTTGAGGACTACAAGTTTATCACTTCTGATCAAACCTAATAATCAATTGTCGTTCTAGAGAACCAAACATTATAGGATGGAGGAGTTGTCGTATGAGATTAGTCGAGGTACGTGTAAGTTGGCCGATAAAAATCATAACCCTCCTTATATTCTTCGTCCAGCACTATACTTCTTAAATTTTTCATCCAACAGCGATTTTCCGCTACGATTTTTACATGATATGTTCGTAATTTTCGAACTTCTTATTTGATAATCTATGATGCAGTATCTGGATGAGAACAAGTCACTGATATTGAAGATTGTTGAGAGCCAAAACTCAGGAAAACTGAATGAATGTGCAGAGTAAGAATTTATGCCTTTTCTAATGATTCCACTTATCATCTGTTTTTCTATGGAAGTGACTGTTTTCCCTTGCATTCGTGCGCTCCGTGCATATCGTAGCTCTCTCTCGTAGTTAACTGTATAATTCGGCTTATATCCGTATTGTGGCTATCGCTATAATGGTATTCCAAGAAAGCATCGTGAGATCCCACGTTGGTTTAAGAGAGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCTCTAGTAGACACGTTTTAAAACTGTGAGGCTGATGACGATACGTAACGGGTTAAAATGGACAATATCTGCTAGTGGTGAGCTTGAGTTGTTACAAGACATTGCAACACTCTTTAAATAGCTGTCATAATGTGAGTTATCTCTCTGATTGATCATTTTTGGATTGATTCTGATTCATGATGATCACATTTCTTCTTGAGTGAGTAACAATGTTAATGGATGAAAATGGATTGATATCTAATCGTTCGCCTATTCAGTTGTCTTGTACTTTTAGACGTGATATCGTGACACGATTATTAGTTTGAACTAGATTCAATTATTATGAGATTGAGGACGACTGTAACAGCCAAAACCCACTGTTAGTAGATATTGTCCGCTTTGACTCGTTACGTATCGCCATCAGCTTCACGTTTTTAAAACACGTCCGATAGGGAGAGGTTTTCATTCCCTTACAAGGGATGCTTCATTCCCCCCGGATCTCACAATCCACCCCCCTTGGGGGCTTAGCGTTCTCACTGGTACACCGCCCAGTGTCTGGCTCTGATACCATTCGTGACAGCTTAAGCCCACTGCTAGCCGACATTGTCCACTTTGACTCATTACGTATCGCCGTCAGCTTCATGATTTTAAAACGCGTCTGTTAGGGAGAGGATTCCACGCTCTGATACCATTTATAACGGTCTTAAAGCGCAAAGGTAACTTTCTTATGTTCTTTCTCTGCAGGAATCAAGCAAGGCTACAGAGGAACCTCATGTACTTGGCTGCCATTGCTGATTCTCAACCACAACCAACTGCCATGCATGCCCAGGTATGGACCTAACTGTTTCAAGATGTAAATTTATCCGATCACTAGCTGTGCATTGTTAGAACACCTCGTAATTTCGCTTTCACTCGACCGTAACAACCATTTCCATTACCACCATTGTTCTACAACGCTCTATACGAAACCCGAGTTCTTCAAGGATTTAGATATAGATTTAGGTGCTTAATCCAAGACGTTTTGGTTTTGCCATATTCTCTCCCAGTACTCTTCCAGTGGCATAATCCAACCAGGAGGACATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCGCAATCACTCATGGCTGCTCGGTCGTCCATGTTGTACACCCAGCAGCCATATTCAACGCTGCAGCAGCAACAAGCTTTGCATAGCCAACTCGGGATGAGCTCGGGAGGAGGCATAGGATTCAACATGCTGCAAAACGACGCAGCCAATGCAGGAGGAGGCAACGGAGGAGGACTTGGAGGAGGAGGAGGCTTTCCTGACTTTGGCCACGGCGGTAGCCTAGGCGGTGGGAGCAAGCAAGACATGGGAGGAACGGGGTCAGGCGAGGGACGAGGAGGGAGCTCCGGGAGCCATGGCGGTGACGGAGGCGAGACGCTGTACTTGAAATCAGCTGATGATGGGAACTGAAAGCATGGTAGAAAAGTAGGTAGAATAGAAGTTAGCTTTATGTGTAAACAATGGTGTGAGGATTCAAACCTCTTAAAACTCTAAACTTTGGTATCCTTTTTCCATGCTAACATATGTTCATGTAAACTTTCTTCTCTTCTTACAATATTCTCACAAATGTTTTTCAAATTATATTTATATTTCAAAATTTTTAAAAGG

mRNA sequence

CCCAAAAAGGGGAAAAAAAAACATATATTCAAACAAAAATTGGATTTTCTCTCTCATCATCACTCACGTGACACCCTTTTGCCTCTAGAAGGGAAACAAGCAGCATCTTTGTAGAGAAGAACAGAGAAACCAGAATTCTCCAAAACCAAAACCCATTTTCTTCTCTCTCTTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGAAGCTGCTACAGCTCCCCTGTGTCACTATCACCGTCCAAACCCTTCTCTATTTCAAACCAGCAAAGGGCATCTTGAATCAGCCGTTTCTGTGAAAACCCATCATTCCTATTACTCAAATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCTGCCTATTATCCTAACAACGTCACTACTGATCACATTCAACAGTATCTGGATGAGAACAAGTCACTGATATTGAAGATTGTTGAGAGCCAAAACTCAGGAAAACTGAATGAATGTGCAGAGAATCAAGCAAGGCTACAGAGGAACCTCATGTACTTGGCTGCCATTGCTGATTCTCAACCACAACCAACTGCCATGCATGCCCAGTACTCTTCCAGTGGCATAATCCAACCAGGAGGACATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCGCAATCACTCATGGCTGCTCGGTCGTCCATGTTGTACACCCAGCAGCCATATTCAACGCTGCAGCAGCAACAAGCTTTGCATAGCCAACTCGGGATGAGCTCGGGAGGAGGCATAGGATTCAACATGCTGCAAAACGACGCAGCCAATGCAGGAGGAGGCAACGGAGGAGGACTTGGAGGAGGAGGAGGCTTTCCTGACTTTGGCCACGGCGGTAGCCTAGGCGGTGGGAGCAAGCAAGACATGGGAGGAACGGGGTCAGGCGAGGGACGAGGAGGGAGCTCCGGGAGCCATGGCGGTGACGGAGGCGAGACGCTGTACTTGAAATCAGCTGATGATGGGAACTGAAAGCATGGTAGAAAAGTAGGTAGAATAGAAGTTAGCTTTATGTGTAAACAATGGTGTGAGGATTCAAACCTCTTAAAACTCTAAACTTTGGTATCCTTTTTCCATGCTAACATATGTTCATGTAAACTTTCTTCTCTTCTTACAATATTCTCACAAATGTTTTTCAAATTATATTTATATTTCAAAATTTTTAAAAGG

Coding sequence (CDS)

ATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCTGCCTATTATCCTAACAACGTCACTACTGATCACATTCAACAGTATCTGGATGAGAACAAGTCACTGATATTGAAGATTGTTGAGAGCCAAAACTCAGGAAAACTGAATGAATGTGCAGAGAATCAAGCAAGGCTACAGAGGAACCTCATGTACTTGGCTGCCATTGCTGATTCTCAACCACAACCAACTGCCATGCATGCCCAGTACTCTTCCAGTGGCATAATCCAACCAGGAGGACATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCGCAATCACTCATGGCTGCTCGGTCGTCCATGTTGTACACCCAGCAGCCATATTCAACGCTGCAGCAGCAACAAGCTTTGCATAGCCAACTCGGGATGAGCTCGGGAGGAGGCATAGGATTCAACATGCTGCAAAACGACGCAGCCAATGCAGGAGGAGGCAACGGAGGAGGACTTGGAGGAGGAGGAGGCTTTCCTGACTTTGGCCACGGCGGTAGCCTAGGCGGTGGGAGCAAGCAAGACATGGGAGGAACGGGGTCAGGCGAGGGACGAGGAGGGAGCTCCGGGAGCCATGGCGGTGACGGAGGCGAGACGCTGTACTTGAAATCAGCTGATGATGGGAACTGA

Protein sequence

MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPTAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQPYSTLQQQQALHSQLGMSSGGGIGFNMLQNDAANAGGGNGGGLGGGGGFPDFGHGGSLGGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN

Homology

[Close]

BLAST of Cp4.1LG11g10100 vs. Swiss-Prot
Match: GIF1_ARATH (GRF1-interacting factor 1 OS=Arabidopsis thaliana GN=GIF1 PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.1e-61
Identity = 158/235 (67.23%), Postives = 172/235 (73.19%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMA YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPTAMHAQYSSS--GIIQ--PGGHYIQHQQA---QQMTPQSLMAARS 120
           NLMYLAAIADSQPQP ++H+QY S+  G+IQ   G HY+Q QQA   QQMT QSLMAARS
Sbjct: 61  NLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARS 120

Query: 121 SMLYT-----QQPYSTLQQQQALHSQLGMSSGGGIGFNMLQNDAANAGGGNGGGL----G 180
           SMLY      QQPY+TLQ QQ  HSQLGMSS              ++GGG   GL    G
Sbjct: 121 SMLYAQQQQQQQPYATLQHQQLHHSQLGMSS--------------SSGGGGSSGLHILQG 180

Query: 181 GGGGFPDFGHGGSLGGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 220
             GGF DFG G       K +MG  G GEGRGGSS    GDGGETLYLKS+DDGN
Sbjct: 181 EAGGFHDFGRG-------KPEMGSGGGGEGRGGSS----GDGGETLYLKSSDDGN 210

[Close]

BLAST of Cp4.1LG11g10100 vs. Swiss-Prot
Match: GIF2_ARATH (GRF1-interacting factor 2 OS=Arabidopsis thaliana GN=GIF2 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.6e-16
Identity = 84/206 (40.78%), Postives = 113/206 (54.85%), Query Frame = 1


Query: 2   QQHLMQMQPMMAAYYP-NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 61
           QQ   QM PM+ +  P NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQK 62

Query: 62  NLMYLAAIADSQPQP--------TAMHAQYSS--SGIIQPGGHYIQHQQAQQMTPQSLMA 121
           NLMYLAAIAD+QP P        TA+ AQ ++  SG +QP  +++QH QA   +P  + A
Sbjct: 63  NLMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSG-MQPPSYFMQHPQA---SPAGIFA 122

Query: 122 ARSSMLY-TQQPYSTLQQQQALHSQLGMSSGGGIGFNMLQNDAANAGGGNGGGLGGGGGF 181
            R  + + +   +   QQQQ +H Q      G     M  N   +A      GLGG  G 
Sbjct: 123 PRGPLQFGSPLQFQDPQQQQQIHQQAMQGHMGIRPMGMTNNGMQHAMQQPETGLGGNVG- 182

Query: 182 PDFGHGGSLGGGSKQDMGGTGSGEGR 196
                   L GG +    G G  +G+
Sbjct: 183 --------LRGGKQDGADGQGKDDGK 195

[Close]

BLAST of Cp4.1LG11g10100 vs. Swiss-Prot
Match: GIF3_ARATH (GRF1-interacting factor 3 OS=Arabidopsis thaliana GN=GIF3 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.5e-14
Identity = 86/235 (36.60%), Postives = 115/235 (48.94%), Query Frame = 1


Query: 3   QHLMQMQPMMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 62
           Q   QM PM+   +P  NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 2   QQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQK 61

Query: 63  NLMYLAAIADSQPQPTAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 122
           NLMYLAAIAD+QPQP A      +SG + P      +  + Q  P   M    ++   QQ
Sbjct: 62  NLMYLAAIADAQPQPPAATL---TSGAMTPQA-MAPNPSSMQPPPSYFMQQHQAVGMAQQ 121

Query: 123 -------PYSTLQ---------QQQALHSQ----------LGMSSGGGIGFNMLQNDAAN 182
                  P   LQ          QQ LH Q          +G+++  G+   M  ++ A 
Sbjct: 122 IPPGIFPPRGPLQFGSPHQFLDPQQQLHQQAMQGHMGIRPMGLNNNNGLQHQMHHHETAL 181

Query: 183 AGGGNGGGLGGGGGFPDFGHGGSLGGGSKQDMGGTGSGEGRGGSSGSHGGDGGET 210
           A    G     GGG PD         G+     G    +G+GGS+  HGG   +T
Sbjct: 182 AANNAGPNDASGGGKPD---------GTNMSQSG---ADGQGGSAARHGGGDAKT 220

[Close]

BLAST of Cp4.1LG11g10100 vs. Swiss-Prot
Match: S18L2_HUMAN (SS18-like protein 2 OS=Homo sapiens GN=SS18L2 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.7e-07
Identity = 33/73 (45.21%), Postives = 43/73 (58.90%), Query Frame = 1


Query: 11 MMAAYYPN------NVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMY 70
          M  A+ P+       V  + IQ+ L+EN  LI  IVE QN G+ NEC + Q  L RNL+Y
Sbjct: 1  MSVAFVPDWLRGKAEVNQETIQRLLEENDQLIRCIVEYQNKGRGNECVQYQHVLHRNLIY 60

Query: 71 LAAIADSQPQPTA 78
          LA IAD+ P  T+
Sbjct: 61 LATIADASPTSTS 73

[Close]

BLAST of Cp4.1LG11g10100 vs. Swiss-Prot
Match: CREST_XENLA (Calcium-responsive transactivator OS=Xenopus laevis GN=ss18l1 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.7e-06
Identity = 39/109 (35.78%), Postives = 50/109 (45.87%), Query Frame = 1


Query: 20  VTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQ------- 79
           VT   IQ+ LDEN  LI  I++ Q+ GK  EC + Q  L RNL+YLA IADS        
Sbjct: 16  VTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLL 75

Query: 80  PQPTAMHAQYSSSGIIQPGGHYIQHQQ-------AQQMTPQSLMAARSS 115
           P P   +      G+ Q G     H Q          + P S+M  + S
Sbjct: 76  PAPPTQNMNLGPGGMSQTGPSQTLHSQGNLSEALGSSLPPSSIMQGQIS 124

[Close]

BLAST of Cp4.1LG11g10100 vs. TrEMBL
Match: A0A0A0LL92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010170 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.2e-97
Identity = 207/226 (91.59%), Postives = 211/226 (93.36%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPTAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP+AMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PYSTLQQQQALHSQLGMSSGGGIGFNMLQNDAANAGGGNGGGLGGGGGFPDFGHGG---- 180
           P+STL QQQALH QLGMSSGGGIGFNMLQNDAANAGGGNGG L GGGGFPDFGHG     
Sbjct: 121 PFSTL-QQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGAL-GGGGFPDFGHGAASDS 180

Query: 181 ---SLGGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 220
              SL GGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 LHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of Cp4.1LG11g10100 vs. TrEMBL
Match: A0A061F2S4_THECC (SSXT family protein isoform 1 OS=Theobroma cacao GN=TCM_026261 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 3.6e-84
Identity = 183/228 (80.26%), Postives = 196/228 (85.96%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPTAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP  MHAQ+ SSGI+QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ
Sbjct: 61  NLMYLAAIADSQPQPPNMHAQFPSSGIMQPGGHYMQHQQAQQMTPQSLMAARSSMLYAQQ 120

Query: 121 PYSTLQQQQALHSQLGMSSGGGIGFNMLQNDAANAGGGNGGGLGGGGGFPDFGHGGS--- 180
           P+S LQQQQALHSQLGMSSGG  G +MLQ++A+ AGG    G  G GGFPDFG G S   
Sbjct: 121 PFSALQQQQALHSQLGMSSGGNTGLHMLQSEASTAGGS---GALGAGGFPDFGRGSSGEG 180

Query: 181 ------LGGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 220
                 + GGSKQD+G +GS EGRGGSSG  GGDGGETLYLK+ADDGN
Sbjct: 181 MHAGRAMAGGSKQDIGSSGSAEGRGGSSGGQGGDGGETLYLKAADDGN 225

[Close]

BLAST of Cp4.1LG11g10100 vs. TrEMBL
Match: A0A061F252_THECC (SSXT family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_026261 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 8.9e-83
Identity = 183/229 (79.91%), Postives = 196/229 (85.59%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQ-YLDENKSLILKIVESQNSGKLNECAENQARLQ 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQ YLDENKSLILKIVESQNSGKL+ECAENQARLQ
Sbjct: 57  MQQHLMQMQPMMAAYYPNNVTTDHIQQQYLDENKSLILKIVESQNSGKLSECAENQARLQ 116

Query: 61  RNLMYLAAIADSQPQPTAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQ 120
           RNLMYLAAIADSQPQP  MHAQ+ SSGI+QPGGHY+QHQQAQQMTPQSLMAARSSMLY Q
Sbjct: 117 RNLMYLAAIADSQPQPPNMHAQFPSSGIMQPGGHYMQHQQAQQMTPQSLMAARSSMLYAQ 176

Query: 121 QPYSTLQQQQALHSQLGMSSGGGIGFNMLQNDAANAGGGNGGGLGGGGGFPDFGHGGS-- 180
           QP+S LQQQQALHSQLGMSSGG  G +MLQ++A+ AGG    G  G GGFPDFG G S  
Sbjct: 177 QPFSALQQQQALHSQLGMSSGGNTGLHMLQSEASTAGGS---GALGAGGFPDFGRGSSGE 236

Query: 181 -------LGGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 220
                  + GGSKQD+G +GS EGRGGSSG  GGDGGETLYLK+ADDGN
Sbjct: 237 GMHAGRAMAGGSKQDIGSSGSAEGRGGSSGGQGGDGGETLYLKAADDGN 282

[Close]

BLAST of Cp4.1LG11g10100 vs. TrEMBL
Match: B9S7I1_RICCO (Synovial sarcoma associated ss18 protein, putative OS=Ricinus communis GN=RCOM_0608010 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.6e-82
Identity = 180/222 (81.08%), Postives = 195/222 (87.84%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGK++ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKISECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPTAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP  MH+Q+SSSGI+QPG HY+QHQQAQQMTPQS+MAARSSMLYTQQ
Sbjct: 61  NLMYLAAIADSQPQPPNMHSQFSSSGIMQPGAHYMQHQQAQQMTPQSVMAARSSMLYTQQ 120

Query: 121 PYSTLQQQQALHSQLGMSSGGGIGFNMLQNDAANAGGGNGGGLGGGGGFPDFGH---GGS 180
            Y+ LQQQQALHSQLGMSSGG  G +MLQ++A+ AGG   GGL G GGFPDFG    G  
Sbjct: 121 QYAALQQQQALHSQLGMSSGGSPGLHMLQSEASTAGG--SGGL-GAGGFPDFGRDASGRG 180

Query: 181 LGGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 220
           + GGSKQDMG  GSGEGRGG+SG  G DGGE LYLKSAD+GN
Sbjct: 181 MAGGSKQDMGNAGSGEGRGGNSGGQGSDGGENLYLKSADEGN 219

[Close]

BLAST of Cp4.1LG11g10100 vs. TrEMBL
Match: A0A067JIJ5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23525 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 4.6e-79
Identity = 178/220 (80.91%), Postives = 188/220 (85.45%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPTAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP  MH Q+ SSGI+ PG HY+QHQQAQQMTPQSLMAARSSMLYTQQ
Sbjct: 61  NLMYLAAIADSQPQPPTMHTQFPSSGIMHPGAHYMQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PYSTLQQQQALHSQLGMSSGGGIGFNMLQNDAANAGGGNGGGLGGGGGFPDFGH-GGSLG 180
            ++ LQQQ ALHSQLGMSSGG  G +MLQN+A+ AGG   GGLG  G FPDFG   G  G
Sbjct: 121 QFAALQQQAALHSQLGMSSGGSQGLHMLQNEASAAGGS--GGLGAAG-FPDFGRDAGGRG 180

Query: 181 GGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 220
            GSKQD+G  GS EGRGGSSG    DGGETLYLKSADDGN
Sbjct: 181 MGSKQDIGSAGSAEGRGGSSGGGVSDGGETLYLKSADDGN 217

[Close]

BLAST of Cp4.1LG11g10100 vs. TAIR10
Match: AT5G28640.1 (AT5G28640.1 SSXT family protein)

HSP 1 Score: 236.9 bits (603), Expect = 1.2e-62
Identity = 158/235 (67.23%), Postives = 172/235 (73.19%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMA YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPTAMHAQYSSS--GIIQ--PGGHYIQHQQA---QQMTPQSLMAARS 120
           NLMYLAAIADSQPQP ++H+QY S+  G+IQ   G HY+Q QQA   QQMT QSLMAARS
Sbjct: 61  NLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARS 120

Query: 121 SMLYT-----QQPYSTLQQQQALHSQLGMSSGGGIGFNMLQNDAANAGGGNGGGL----G 180
           SMLY      QQPY+TLQ QQ  HSQLGMSS              ++GGG   GL    G
Sbjct: 121 SMLYAQQQQQQQPYATLQHQQLHHSQLGMSS--------------SSGGGGSSGLHILQG 180

Query: 181 GGGGFPDFGHGGSLGGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 220
             GGF DFG G       K +MG  G GEGRGGSS    GDGGETLYLKS+DDGN
Sbjct: 181 EAGGFHDFGRG-------KPEMGSGGGGEGRGGSS----GDGGETLYLKSSDDGN 210

[Close]

BLAST of Cp4.1LG11g10100 vs. TAIR10
Match: AT4G00850.1 (AT4G00850.1 GRF1-interacting factor 3)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-15
Identity = 86/235 (36.60%), Postives = 115/235 (48.94%), Query Frame = 1


Query: 3   QHLMQMQPMMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 62
           Q   QM PM+   +P  NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 2   QQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQK 61

Query: 63  NLMYLAAIADSQPQPTAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 122
           NLMYLAAIAD+QPQP A      +SG + P      +  + Q  P   M    ++   QQ
Sbjct: 62  NLMYLAAIADAQPQPPAATL---TSGAMTPQA-MAPNPSSMQPPPSYFMQQHQAVGMAQQ 121

Query: 123 -------PYSTLQ---------QQQALHSQ----------LGMSSGGGIGFNMLQNDAAN 182
                  P   LQ          QQ LH Q          +G+++  G+   M  ++ A 
Sbjct: 122 IPPGIFPPRGPLQFGSPHQFLDPQQQLHQQAMQGHMGIRPMGLNNNNGLQHQMHHHETAL 181

Query: 183 AGGGNGGGLGGGGGFPDFGHGGSLGGGSKQDMGGTGSGEGRGGSSGSHGGDGGET 210
           A    G     GGG PD         G+     G    +G+GGS+  HGG   +T
Sbjct: 182 AANNAGPNDASGGGKPD---------GTNMSQSG---ADGQGGSAARHGGGDAKT 220

[Close]

BLAST of Cp4.1LG11g10100 vs. TAIR10
Match: AT1G01160.2 (AT1G01160.2 GRF1-interacting factor 2)

HSP 1 Score: 68.9 bits (167), Expect = 4.3e-12
Identity = 84/240 (35.00%), Postives = 113/240 (47.08%), Query Frame = 1


Query: 2   QQHLMQMQPMMAAYYP-NNVTTDHIQQ--------------------------------- 61
           QQ   QM PM+ +  P NN+TT+ IQ+                                 
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKMLGGSGNFESGFQEWTLKLDACLMLLFCTFSWL 62

Query: 62  -YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP--------TAM 121
            YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QP P        TA+
Sbjct: 63  DYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAV 122

Query: 122 HAQYSS--SGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLY-TQQPYSTLQQQQALHSQL 181
            AQ ++  SG +QP  +++QH QA   +P  + A R  + + +   +   QQQQ +H Q 
Sbjct: 123 AAQMATPHSG-MQPPSYFMQHPQA---SPAGIFAPRGPLQFGSPLQFQDPQQQQQIHQQA 182

Query: 182 GMSSGGGIGFNMLQNDAANAGGGNGGGLGGGGGFPDFGHGGSLGGGSKQDMGGTGSGEGR 196
                G     M  N   +A      GLGG  G         L GG +    G G  +G+
Sbjct: 183 MQGHMGIRPMGMTNNGMQHAMQQPETGLGGNVG---------LRGGKQDGADGQGKDDGK 229

[Close]

BLAST of Cp4.1LG11g10100 vs. NCBI nr
Match: gi|449442961|ref|XP_004139249.1| (PREDICTED: GRF1-interacting factor 1 [Cucumis sativus])

HSP 1 Score: 363.2 bits (931), Expect = 3.1e-97
Identity = 207/226 (91.59%), Postives = 211/226 (93.36%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPTAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP+AMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PYSTLQQQQALHSQLGMSSGGGIGFNMLQNDAANAGGGNGGGLGGGGGFPDFGHGG---- 180
           P+STL QQQALH QLGMSSGGGIGFNMLQNDAANAGGGNGG L GGGGFPDFGHG     
Sbjct: 121 PFSTL-QQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGAL-GGGGFPDFGHGAASDS 180

Query: 181 ---SLGGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 220
              SL GGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 LHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of Cp4.1LG11g10100 vs. NCBI nr
Match: gi|659070713|ref|XP_008456296.1| (PREDICTED: GRF1-interacting factor 1 [Cucumis melo])

HSP 1 Score: 361.7 bits (927), Expect = 9.1e-97
Identity = 206/226 (91.15%), Postives = 210/226 (92.92%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPTAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP+AMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PYSTLQQQQALHSQLGMSSGGGIGFNMLQNDAANAGGGNGGGLGGGGGFPDFGHGG---- 180
           P+STL QQQALH QLGMSSGGGIGFNMLQNDA NAGGGNGG L GGGGFPDFGHG     
Sbjct: 121 PFSTL-QQQALHGQLGMSSGGGIGFNMLQNDAGNAGGGNGGAL-GGGGFPDFGHGAASDS 180

Query: 181 ---SLGGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 220
              SL GGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 LHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of Cp4.1LG11g10100 vs. NCBI nr
Match: gi|590642355|ref|XP_007030495.1| (SSXT family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 319.3 bits (817), Expect = 5.2e-84
Identity = 183/228 (80.26%), Postives = 196/228 (85.96%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPTAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP  MHAQ+ SSGI+QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ
Sbjct: 61  NLMYLAAIADSQPQPPNMHAQFPSSGIMQPGGHYMQHQQAQQMTPQSLMAARSSMLYAQQ 120

Query: 121 PYSTLQQQQALHSQLGMSSGGGIGFNMLQNDAANAGGGNGGGLGGGGGFPDFGHGGS--- 180
           P+S LQQQQALHSQLGMSSGG  G +MLQ++A+ AGG    G  G GGFPDFG G S   
Sbjct: 121 PFSALQQQQALHSQLGMSSGGNTGLHMLQSEASTAGGS---GALGAGGFPDFGRGSSGEG 180

Query: 181 ------LGGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 220
                 + GGSKQD+G +GS EGRGGSSG  GGDGGETLYLK+ADDGN
Sbjct: 181 MHAGRAMAGGSKQDIGSSGSAEGRGGSSGGQGGDGGETLYLKAADDGN 225

[Close]

BLAST of Cp4.1LG11g10100 vs. NCBI nr
Match: gi|590642358|ref|XP_007030496.1| (SSXT family protein isoform 2, partial [Theobroma cacao])

HSP 1 Score: 314.7 bits (805), Expect = 1.3e-82
Identity = 183/229 (79.91%), Postives = 196/229 (85.59%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQ-YLDENKSLILKIVESQNSGKLNECAENQARLQ 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQ YLDENKSLILKIVESQNSGKL+ECAENQARLQ
Sbjct: 57  MQQHLMQMQPMMAAYYPNNVTTDHIQQQYLDENKSLILKIVESQNSGKLSECAENQARLQ 116

Query: 61  RNLMYLAAIADSQPQPTAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQ 120
           RNLMYLAAIADSQPQP  MHAQ+ SSGI+QPGGHY+QHQQAQQMTPQSLMAARSSMLY Q
Sbjct: 117 RNLMYLAAIADSQPQPPNMHAQFPSSGIMQPGGHYMQHQQAQQMTPQSLMAARSSMLYAQ 176

Query: 121 QPYSTLQQQQALHSQLGMSSGGGIGFNMLQNDAANAGGGNGGGLGGGGGFPDFGHGGS-- 180
           QP+S LQQQQALHSQLGMSSGG  G +MLQ++A+ AGG    G  G GGFPDFG G S  
Sbjct: 177 QPFSALQQQQALHSQLGMSSGGNTGLHMLQSEASTAGGS---GALGAGGFPDFGRGSSGE 236

Query: 181 -------LGGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 220
                  + GGSKQD+G +GS EGRGGSSG  GGDGGETLYLK+ADDGN
Sbjct: 237 GMHAGRAMAGGSKQDIGSSGSAEGRGGSSGGQGGDGGETLYLKAADDGN 282

[Close]

BLAST of Cp4.1LG11g10100 vs. NCBI nr
Match: gi|255561883|ref|XP_002521950.1| (PREDICTED: GRF1-interacting factor 1 [Ricinus communis])

HSP 1 Score: 313.2 bits (801), Expect = 3.7e-82
Identity = 180/222 (81.08%), Postives = 195/222 (87.84%), Query Frame = 1


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGK++ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKISECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPTAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP  MH+Q+SSSGI+QPG HY+QHQQAQQMTPQS+MAARSSMLYTQQ
Sbjct: 61  NLMYLAAIADSQPQPPNMHSQFSSSGIMQPGAHYMQHQQAQQMTPQSVMAARSSMLYTQQ 120

Query: 121 PYSTLQQQQALHSQLGMSSGGGIGFNMLQNDAANAGGGNGGGLGGGGGFPDFGH---GGS 180
            Y+ LQQQQALHSQLGMSSGG  G +MLQ++A+ AGG   GGL G GGFPDFG    G  
Sbjct: 121 QYAALQQQQALHSQLGMSSGGSPGLHMLQSEASTAGG--SGGL-GAGGFPDFGRDASGRG 180

Query: 181 LGGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 220
           + GGSKQDMG  GSGEGRGG+SG  G DGGE LYLKSAD+GN
Sbjct: 181 MAGGSKQDMGNAGSGEGRGGNSGGQGSDGGENLYLKSADEGN 219

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g10100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GIF1_ARATH	2.1e-61	67.23	GRF1-interacting factor 1 OS=Arabidopsis thaliana GN=GIF1 PE=1 SV=1	[more]
GIF2_ARATH	4.6e-16	40.78	GRF1-interacting factor 2 OS=Arabidopsis thaliana GN=GIF2 PE=1 SV=1	[more]
GIF3_ARATH	2.5e-14	36.60	GRF1-interacting factor 3 OS=Arabidopsis thaliana GN=GIF3 PE=1 SV=1	[more]
S18L2_HUMAN	6.7e-07	45.21	SS18-like protein 2 OS=Homo sapiens GN=SS18L2 PE=3 SV=1	[more]
CREST_XENLA	5.7e-06	35.78	Calcium-responsive transactivator OS=Xenopus laevis GN=ss18l1 PE=2 SV=1	[more]

BLAST of Cp4.1LG11g10100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL92_CUCSA	2.2e-97	91.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010170 PE=4 SV=1	[more]
A0A061F2S4_THECC	3.6e-84	80.26	SSXT family protein isoform 1 OS=Theobroma cacao GN=TCM_026261 PE=4 SV=1	[more]
A0A061F252_THECC	8.9e-83	79.91	SSXT family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_026261 PE=4 S...	[more]
B9S7I1_RICCO	2.6e-82	81.08	Synovial sarcoma associated ss18 protein, putative OS=Ricinus communis GN=RCOM_0...	[more]
A0A067JIJ5_JATCU	4.6e-79	80.91	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23525 PE=4 SV=1	[more]

BLAST of Cp4.1LG11g10100 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G28640.1	1.2e-62	67.23	SSXT family protein	[more]
AT4G00850.1	1.4e-15	36.60	GRF1-interacting factor 3	[more]
AT1G01160.2	4.3e-12	35.00	GRF1-interacting factor 2	[more]

BLAST of Cp4.1LG11g10100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442961\|ref\|XP_004139249.1\|	3.1e-97	91.59	PREDICTED: GRF1-interacting factor 1 [Cucumis sativus]	[more]
gi\|659070713\|ref\|XP_008456296.1\|	9.1e-97	91.15	PREDICTED: GRF1-interacting factor 1 [Cucumis melo]	[more]
gi\|590642355\|ref\|XP_007030495.1\|	5.2e-84	80.26	SSXT family protein isoform 1 [Theobroma cacao]	[more]
gi\|590642358\|ref\|XP_007030496.1\|	1.3e-82	79.91	SSXT family protein isoform 2, partial [Theobroma cacao]	[more]
gi\|255561883\|ref\|XP_002521950.1\|	3.7e-82	81.08	PREDICTED: GRF1-interacting factor 1 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007726	SS18_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009955	adaxial/abaxial pattern specification
biological_process	GO:0048366	leaf development
biological_process	GO:0006397	mRNA processing
biological_process	GO:0008380	RNA splicing
biological_process	GO:0008033	tRNA processing
biological_process	GO:1903506	regulation of nucleic acid-templated transcription
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003713	transcription coactivator activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g10100.1	Cp4.1LG11g10100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007726	SS18 family	PANTHER	PTHR23107	SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN	coord: 1..219 score: 3.4E
IPR007726	SS18 family	PFAM	PF05030	SSXT	coord: 19..75 score: 2.6
None	No IPR available	PANTHER	PTHR23107:SF6	GRF1-INTERACTING FACTOR 1	coord: 1..219 score: 3.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG11g10100	Cucsa.133040	Cucumber (Gy14) v1	cgycpeB0351
Cp4.1LG11g10100	CmaCh12G011390	Cucurbita maxima (Rimu)	cmacpeB171
Cp4.1LG11g10100	CmaCh05G012230	Cucurbita maxima (Rimu)	cmacpeB767
Cp4.1LG11g10100	CmoCh05G012510	Cucurbita moschata (Rifu)	cmocpeB721
Cp4.1LG11g10100	CmoCh12G011580	Cucurbita moschata (Rifu)	cmocpeB147
Cp4.1LG11g10100	Cla013633	Watermelon (97103) v1	cpewmB113
Cp4.1LG11g10100	Csa2G010170	Cucumber (Chinese Long) v2	cpecuB103
Cp4.1LG11g10100	MELO3C004407	Melon (DHL92) v3.5.1	cpemeB099
Cp4.1LG11g10100	ClCG02G016890	Watermelon (Charleston Gray)	cpewcgB104
Cp4.1LG11g10100	CSPI02G02710	Wild cucumber (PI 183967)	cpecpiB100
Cp4.1LG11g10100	Lsi11G004190	Bottle gourd (USVL1VR-Ls)	cpelsiB074
Cp4.1LG11g10100	MELO3C004407.2	Melon (DHL92) v3.6.1	cpemedB123
Cp4.1LG11g10100	CsaV3_2G003880	Cucumber (Chinese Long) v3	cpecucB0114
Cp4.1LG11g10100	BhiUN66G23	Wax gourd	cpewgoB0154
Cp4.1LG11g10100	CsGy2G002810	Cucumber (Gy14) v2	cgybcpeB168
Cp4.1LG11g10100	Carg22999	Silver-seed gourd	carcpeB1494
Cp4.1LG11g10100	Carg17432	Silver-seed gourd	carcpeB0357

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG11g10100	Cp4.1LG07g09690	Cucurbita pepo (Zucchini)	cpecpeB139

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG11g10100	Wax gourd	cpewgoB0114