CSPI02G02710 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G02710
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionGRF1-interacting factor-like protein
LocationChr2 : 1889457 .. 1894423 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAACAGATTCAAACAAAAATTGGATTGTCTCTCTCATCATCACTCACGTGACACCCTTTTTCCCCCTAGAGAGAGAGAGAAGCCAAAAGGAAAAGGAAAAAAAAAAAAAAAAAGACGAAGCTTTTGCTCTGTTCCTTAGGGAGGGAAACAAGTAGCATCTTTGTATAGAGAAAACAGAGAAGAGAGAGAGAGAGAGACGAAACGCTTCTGTTGGCCACATTACAAAGCCAAAACGGCTGCACCCACCACCAGAAAATTCCTCAAAAACCAAAAACCAAAACCCCCTTTTCCTCTCTTTCTCTCACATAAAAACAGAGTTTGGTTGTGTGTATAATCTGCAGAAGCTGCTACACCTCTCTCTCTGTGTCACTATCACCGTCCAACGCCACTCTATTTCAAACCAACGAAGAACATAAATTTTAAAACAAAAGAAAAAAAAAAAAAGAGGAAAAAACATCCTCAAAAGCAAAGAGCATCTTGAATCAGCCGTTTCTGTGAAAAAACTCATCATTCATATTTCACAAATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATTCCAACAACGTCACTACTGATCACATTCAACAGGTTATTCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTTTTTTAGTCTATTTATCTTATTAATCCAACCCCATTTCCAGGTTTTTTTTCTTTCATTTCCCCTCTTTTTTTCAACTGGGGTTTCTTTGTTTTTCAACTTAGGGATGATTGTTTTTCTTCCCTTTTCTACTTTTTCTTCCTTTTTTAAGTTTTGGGTTTGTTTAGTTTTGCTTTCTTTCACGTGCCTTTGTCTCTATTTAATGGATTTTCGTTTTCTATTTACAGAAGCTGAGACCAATACATCTATGGCTATCCTTGTTTATTTTCATCTCTTTTCTTGATTAAAGTTAATGACTGTGTTTCTTTTAATTGCATGATTGATTTCTGCCTTTTTGTCTTAATCTTAATAGAAAAGAAAAATGAACTGGTTGGATAGTGACCTTTTTTTTAATGTTTTCCCCCCCTCTCTATCAATGAAGTGGAGAAAAAGTGATTTGTTGGGATATAAAACTGTTGAGAGCCTGAGCTTGAGCTTGAGCTTGATATTTATATGCTTTAAATATCTTAGATTAAGTGGCTTTTTGGGTAGTCTTCTTGTTCAAAAACTAAAATTAGAAGAAAAAAAAAAAAAGAGAAAAAGGTAGCTTATTGGTAATGTTTGTATGTGAAACAGTTAAAAGCTTGAGCCCTTTGTGGTTTGCAAGTTTATTAGTTCTTATATCAATTAGTATTTTATTCCTTTTTTCTGCTTTTTGTAATGTTATTGTTTTACATTGACATAAGCATGTTGGAATTTTAAATCTCATTTCAATGCTTTGTATCTTAACTTGTTGAGGTGAATGTATCATATACAAGTCCTTGAATGTGTTTTCTAAGGTCTGTTATATCATGACTCGGTTTTTGGGGTTCGATCAAATATTCTCATAAACCCTCCTATATTCAAACTCAATGGCTTTATTGAGAATCAAATGTTAATAGGTTTAAGTTGGAGATTAGCCGAGGGGCAGCGTAAGTTGGCTGATATTTTAAGAATAAAAGATTCTTTTATCTTTTAATTAGCTCCTTTTTAGAGAGAAAAACGGTGTGACTTGATAAGTTGAAAAATATTCATGTGCTAAAGTATTAAAAGGATGGGGGTAATGCAAATCTTTTTTAACTTGACACTTCTTGTTATGACTTTTTTAAATCTATATAAGTAGAGAAGTTAAAAGTGTTTTAATATTATCGTATTATGACGCTAAGATGGAAGAGGGAAGCTTGAATAGTGATTGGTCAATCATGAAACAGTATTTTAAGTTGCTGTCTAGTTATGATTCTCCTGAGTTGCTTACAAGGATCATACACTTCAGCACTTGCTTTTTATGGTTTATTATGTCTGATCAATCAAATCTAACAATATATGTTATATGTACTTGGTCGGTTCTGCATAAATTTAGGAGTTTCAATCTGTTATTTTTTTGTGTGTCCAAAACAAGCTATTCTTTTTCAAGAATGACTTGTTAAACTAGTTAAATATGTTCATTTTCTTTCAAAACTGCCTTGTAGTTCGATTCTTTTTCCTTTTCCTTTCTTCTTATTCTACAAACACCAATACTATAGTCATTTAATTTTTGGCAACTTCTTGACGCGATATATTAATAGTTGTCTAACTTATTATTTGATAATCTACGTTGCAGTATTTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAAAGCCAAAACTCAGGAAAATTGAATGAATGTGCAGAGTAAGAATTTATGCTTTCCCTAATGATTCTACTTATCATACATGATTGCTATTGCTCTCATTCATTGTCATTTTTTTTACATGGTCGTGACTTTCATTGCATTCGTTCCAAATTATCCTCTCTGGCTCTCCCTACGTATTTTTGCTCTCTCTCTCTTTTTGTATATTTGGCTGCGGCTGTAATGGTCCAAGAAAGGATATACTATATAGTATAGCTGAATCGTTGCATTACATCACTCTTTAAGTAACTGTCTTAATTTGAATTTTCTTTTTCAGTTTAATATAATGGGTTTTAGGATGAAGAAGCATGGATTTCGATATTTATCCTTGGGAAAGTCATGTTATATAGTTCTGTTTAAACAAAGTTTTGCTGGGAATTAAAACAGGGTTCTTTTGGAGGCTTTTGTTAGGATCCCACCTAACAAGAATTATCTCAAGAACAATGGATGAACTCAAGAATAGTTAAAGAACAAACAAATATAAAAATATATGAAATATATTCTAGAATATCATAAGAACAAGTAACAAAGTAGCCTTGGCCTTTCGAGAGGGCTAGACTCTCCCAAGGTACCCTTTCAAGGAAATCCCTTTACAAAATTCTTAACACCTCTCCCCAACCTCTCTTCTATTATTTATAACAAAATGACCTAACTAACTTTCTAACTATTTGCTAATATGCCCCCACTAATAGCCACGTTCATTTTCTATGAATAATCTACTTCCTTTGGTAATAATCCTCCCTGATATTACTGCTAAGGTCACTTTCTCTTTCTGCTTGATCATTTTGATATTTGATTCATATTCATGTTGATCACAGTTTCCACTTGAGTAACAACTATTCATGGATGAAAAGTGGAATGATATCTAAGTATCTAACCATTCACCAAATATTCGATTTTGATACAGACGTTGGGAAAACAAAACACTGTCATAGAATTTTCTTGAAAAGAAACCCGAAAATGAAAATATATGGCTTGGTTGTTAAAGTAGGCCTGTAGGCGTATGCCCAAGTAGTATGCACTTAATACTCTTCCATAAATGAGTGGAATAATGCCAAGTTTCTTCGATGATATTGACTTTGGTCACAAGCTTCTGAGGCTGACAATAGGGATTTGATTCATGTTGTTTAATTATCTTGTATTTCTAGACTTCATCAAATGACACAGTTAGTAGTTGAAGCGCAAAACTTACTCTCTCACCTTTTTTCTGTGCAGGAATCAAGCTAGGCTACAGAGAAACCTCATGTACTTGGCTGCCATTGCGGATTCTCAACCTCAACCTTCTGCGATGCATGCCCAGGTATGGACATAATTGTTTCAAGATGTAAATTTATCCAATCACCTGCCAGGCATAGTTATAGAAAACCCATTCCGATTCCGTTAGATCAACACCCTGATTGCTTTCGCCTTAAGAATCATTTTCATTACATCCATTTTCTGCAACACTCTACGACTTTGGCCACAATTGCCCCTTGGAACTTGAGTTCTTCTAGGCCCTAATCCTCTGGATTTGTTTAGCCTACTTGATAATAAGGATTTTAAGTTATTTAAGTTATAGATTTAGGTGCTTTATCCTTTTCTTATTATTATTTTTTTTTTGTTTCTTTCCTTTTTTCTCCTTCAAACTAAATGGAATTGAAATTAATCTATAAGATGATTTGCTATTGTCATGTTCTCTTCAGTACTCTTCCAGTGGCATGATCCAACCAGGAGGGCATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCACAATCGCTGATGGCCGCCCGATCCTCTATGTTGTACTCCCAGCAGCCATTTTCAACACTGCAGCAGCAAGCTTTGCACGGCCAACTCGGTATGAGCTCTGGAGGAGGCATAGGATTCAACATGCTGCAAAACGATGCTGCCAATGCAGGAGGAGGCAATGGAGGAGCACTTGGAGGAGGAGGCTTCCCAGATTTCGGCCACGGTGCTGCAAGTGACAGCTTGCACCGTAGCCTAGCTGGTGGGAGCAAGCAAGACATGGGAGGAACTGGGTCTGCAGAGGGACGAGGTGGGAGCTCAGGGAGCCATGGTGGTGATGGAGGCGAGACTCTGTACTTGAAATCAGCTGATGATGGGAACTGATCAAAGTATGAGGAGAAAAAAAGATAAGTGTTGGGGTGTTCAGTGAGTTGATGGTAGAAAAGTAGGCACAATAGAAATTAGGAAGATAAAAGAAGAGAAGAAACCCTTCTTACTTGAAAAAAAAAAAGAAGCACTTGCTTTTTATCTTATGTGTAAACAATGGTGTGAGGATTCAAACCTCATAAAACTTCGACCTTTGGGTGTCCTTTTTCCATGTTAAAATATGTGCTTGTAGTGTATTATGTAAAGTTTCTTCTCTTGTTCTGTGCTA

mRNA sequence

ATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATTCCAACAACGTCACTACTGATCACATTCAACAGTATTTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAAAGCCAAAACTCAGGAAAATTGAATGAATGTGCAGAGAATCAAGCTAGGCTACAGAGAAACCTCATGTACTTGGCTGCCATTGCGGATTCTCAACCTCAACCTTCTGCGATGCATGCCCAGTACTCTTCCAGTGGCATGATCCAACCAGGAGGGCATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCACAATCGCTGATGGCCGCCCGATCCTCTATGTTGTACTCCCAGCAGCCATTTTCAACACTGCAGCAGCAAGCTTTGCACGGCCAACTCGGTATGAGCTCTGGAGGAGGCATAGGATTCAACATGCTGCAAAACGATGCTGCCAATGCAGGAGGAGGCAATGGAGGAGCACTTGGAGGAGGAGGCTTCCCAGATTTCGGCCACGGTGCTGCAAGTGACAGCTTGCACCGTAGCCTAGCTGGTGGGAGCAAGCAAGACATGGGAGGAACTGGGTCTGCAGAGGGACGAGGTGGGAGCTCAGGGAGCCATGGTGGTGATGGAGGCGAGACTCTGTACTTGAAATCAGCTGATGATGGGAACTGA

Coding sequence (CDS)

ATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATTCCAACAACGTCACTACTGATCACATTCAACAGTATTTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAAAGCCAAAACTCAGGAAAATTGAATGAATGTGCAGAGAATCAAGCTAGGCTACAGAGAAACCTCATGTACTTGGCTGCCATTGCGGATTCTCAACCTCAACCTTCTGCGATGCATGCCCAGTACTCTTCCAGTGGCATGATCCAACCAGGAGGGCATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCACAATCGCTGATGGCCGCCCGATCCTCTATGTTGTACTCCCAGCAGCCATTTTCAACACTGCAGCAGCAAGCTTTGCACGGCCAACTCGGTATGAGCTCTGGAGGAGGCATAGGATTCAACATGCTGCAAAACGATGCTGCCAATGCAGGAGGAGGCAATGGAGGAGCACTTGGAGGAGGAGGCTTCCCAGATTTCGGCCACGGTGCTGCAAGTGACAGCTTGCACCGTAGCCTAGCTGGTGGGAGCAAGCAAGACATGGGAGGAACTGGGTCTGCAGAGGGACGAGGTGGGAGCTCAGGGAGCCATGGTGGTGATGGAGGCGAGACTCTGTACTTGAAATCAGCTGATGATGGGAACTGA
Homology
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BLAST of CSPI02G02710 vs. Swiss-Prot
Match: GIF1_ARATH (GRF1-interacting factor 1 OS=Arabidopsis thaliana GN=GIF1 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.8e-61
Identity = 155/241 (64.32%), Postives = 171/241 (70.95%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMA YY +NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSS--GMIQ--PGGHYIQHQQA---QQMTPQSLMAARS 120
           NLMYLAAIADSQPQP ++H+QY S+  GMIQ   G HY+Q QQA   QQMT QSLMAARS
Sbjct: 61  NLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARS 120

Query: 121 SMLYS-----QQPFSTLQQQAL-HGQLGMSS----GGGIGFNMLQNDAANAGGGNGGALG 180
           SMLY+     QQP++TLQ Q L H QLGMSS    GG  G ++LQ +A            
Sbjct: 121 SMLYAQQQQQQQPYATLQHQQLHHSQLGMSSSSGGGGSSGLHILQGEA------------ 180

Query: 181 GGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDG 225
            GGF DFG G              K +MG  G  EGRGGSS    GDGGETLYLKS+DDG
Sbjct: 181 -GGFHDFGRG--------------KPEMGSGGGGEGRGGSS----GDGGETLYLKSSDDG 210

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BLAST of CSPI02G02710 vs. Swiss-Prot
Match: GIF2_ARATH (GRF1-interacting factor 2 OS=Arabidopsis thaliana GN=GIF2 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.3e-17
Identity = 80/195 (41.03%), Postives = 111/195 (56.92%), Query Frame = 1 

Query: 2   QQHLMQMQPMMAAYY-SNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 61
           QQ   QM PM+ +   +NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQK 62

Query: 62  NLMYLAAIADSQPQP--------SAMHAQYSS--SGMIQPGGHYIQHQQAQQMTPQSLMA 121
           NLMYLAAIAD+QP P        +A+ AQ ++  SGM QP  +++QH QA   +P  + A
Sbjct: 63  NLMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGM-QPPSYFMQHPQA---SPAGIFA 122

Query: 122 ARSSMLYSQ-------QPFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALG 178
            R  + +         Q    + QQA+ G +G+    G+  N +Q+       G GG +G
Sbjct: 123 PRGPLQFGSPLQFQDPQQQQQIHQQAMQGHMGIRP-MGMTNNGMQHAMQQPETGLGGNVG 182

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BLAST of CSPI02G02710 vs. Swiss-Prot
Match: GIF3_ARATH (GRF1-interacting factor 3 OS=Arabidopsis thaliana GN=GIF3 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.0e-15
Identity = 88/244 (36.07%), Postives = 117/244 (47.95%), Query Frame = 1 

Query: 3   QHLMQMQPMMAAYY--SNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 62
           Q   QM PM+   +  +NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 2   QQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQK 61

Query: 63  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 122
           NLMYLAAIAD+QPQP A      +SG + P      +  + Q  P   M    ++  +QQ
Sbjct: 62  NLMYLAAIADAQPQPPAATL---TSGAMTPQA-MAPNPSSMQPPPSYFMQQHQAVGMAQQ 121

Query: 123 ----------------------PFSTLQQQALHGQLGMSSGGGIGFNMLQND-------- 182
                                 P   L QQA+ G +G+   G    N LQ+         
Sbjct: 122 IPPGIFPPRGPLQFGSPHQFLDPQQQLHQQAMQGHMGIRPMGLNNNNGLQHQMHHHETAL 181

Query: 183 AANAGGGNGGALGGGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGD 215
           AAN  G N  +  GGG PD                G+     G   A+G+GGS+  HGG 
Sbjct: 182 AANNAGPNDAS--GGGKPD----------------GTNMSQSG---ADGQGGSAARHGGG 220

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BLAST of CSPI02G02710 vs. Swiss-Prot
Match: S18L2_HUMAN (SS18-like protein 2 OS=Homo sapiens GN=SS18L2 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06
Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = 1 

Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQP 74
          V  + IQ+ L+EN  LI  IVE QN G+ NEC + Q  L RNL+YLA IAD+ P
Sbjct: 16 VNQETIQRLLEENDQLIRCIVEYQNKGRGNECVQYQHVLHRNLIYLATIADASP 69

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BLAST of CSPI02G02710 vs. Swiss-Prot
Match: S18L2_MOUSE (SS18-like protein 2 OS=Mus musculus GN=Ss18l2 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.8e-06
Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 1 

Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADS 72
          V  + IQ+ L+EN  LI  IVE QN G+ NEC + Q  L RNL+YLA IAD+
Sbjct: 16 VNQETIQRLLEENDQLIRCIVEYQNKGRANECVQYQHVLHRNLIYLATIADA 67

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BLAST of CSPI02G02710 vs. TrEMBL
Match: A0A0A0LL92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010170 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 7.7e-114
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180
           PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]
BLAST of CSPI02G02710 vs. TrEMBL
Match: A0A061F2S4_THECC (SSXT family protein isoform 1 OS=Theobroma cacao GN=TCM_026261 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 5.0e-89
Identity = 185/227 (81.50%), Postives = 204/227 (89.87%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQP  MHAQ+ SSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPPNMHAQFPSSGIMQPGGHYMQHQQAQQMTPQSLMAARSSMLYAQQ 120

Query: 121 PFSTL-QQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSL 180
           PFS L QQQALH QLGMSSGG  G +MLQ++A+ AGG   GALG GGFPDFG G++ + +
Sbjct: 121 PFSALQQQQALHSQLGMSSGGNTGLHMLQSEASTAGG--SGALGAGGFPDFGRGSSGEGM 180

Query: 181 H--RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           H  R++AGGSKQD+G +GSAEGRGGSSG  GGDGGETLYLK+ADDGN
Sbjct: 181 HAGRAMAGGSKQDIGSSGSAEGRGGSSGGQGGDGGETLYLKAADDGN 225

[Close]
BLAST of CSPI02G02710 vs. TrEMBL
Match: W9RHN8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024545 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 6.5e-89
Identity = 184/224 (82.14%), Postives = 196/224 (87.50%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQP  MHAQY SS M+QPG HY+QHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPPTMHAQYPSSSMMQPGAHYMQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180
           PF  LQQQALHGQLGMSSGG  G +M+Q D  +AGG   G LG GGFPDFG G+A + LH
Sbjct: 121 PFPALQQQALHGQLGMSSGGSSGLHMMQGDIGSAGG--SGQLGAGGFPDFGRGSAGEGLH 180

Query: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           R +AGGSKQD+G +GSAEGRGGSS    GDGGETLYLKSADDGN
Sbjct: 181 RGMAGGSKQDIGSSGSAEGRGGSS----GDGGETLYLKSADDGN 218

[Close]
BLAST of CSPI02G02710 vs. TrEMBL
Match: A0A061F252_THECC (SSXT family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_026261 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.2e-87
Identity = 185/228 (81.14%), Postives = 204/228 (89.47%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQ-QYLDENKSLILKIVESQNSGKLNECAENQARLQ 60
           MQQHLMQMQPMMAAYY NNVTTDHIQ QYLDENKSLILKIVESQNSGKL+ECAENQARLQ
Sbjct: 57  MQQHLMQMQPMMAAYYPNNVTTDHIQQQYLDENKSLILKIVESQNSGKLSECAENQARLQ 116

Query: 61  RNLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQ 120
           RNLMYLAAIADSQPQP  MHAQ+ SSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY+Q
Sbjct: 117 RNLMYLAAIADSQPQPPNMHAQFPSSGIMQPGGHYMQHQQAQQMTPQSLMAARSSMLYAQ 176

Query: 121 QPFSTL-QQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDS 180
           QPFS L QQQALH QLGMSSGG  G +MLQ++A+ AGG   GALG GGFPDFG G++ + 
Sbjct: 177 QPFSALQQQQALHSQLGMSSGGNTGLHMLQSEASTAGG--SGALGAGGFPDFGRGSSGEG 236

Query: 181 LH--RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           +H  R++AGGSKQD+G +GSAEGRGGSSG  GGDGGETLYLK+ADDGN
Sbjct: 237 MHAGRAMAGGSKQDIGSSGSAEGRGGSSGGQGGDGGETLYLKAADDGN 282

[Close]
BLAST of CSPI02G02710 vs. TrEMBL
Match: A0A0D2TMU1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G279600 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 9.8e-85
Identity = 182/230 (79.13%), Postives = 198/230 (86.09%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQM PMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMHPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPG-GHYIQHQQAQQMTPQSLMAARSSMLYSQ 120
           NLMYLAAIADSQPQP  MHAQ+ S G++QPG GHY+QHQQAQQMT QSLMAARSSMLYSQ
Sbjct: 61  NLMYLAAIADSQPQPPTMHAQFPSGGIMQPGAGHYMQHQQAQQMTQQSLMAARSSMLYSQ 120

Query: 121 QPFSTL---QQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAAS 180
           QPFS L   QQQALH QLGMSSGG  G +MLQ +++ AGG   GALG GGFPDFG G++ 
Sbjct: 121 QPFSALQQQQQQALHSQLGMSSGGSTGLHMLQTESSTAGG--SGALGAGGFPDFGRGSSG 180

Query: 181 DSLH--RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           + +H  RS+AGGSKQD+G  GSAEGRGGSSG  G DGGETLYLK+ADDGN
Sbjct: 181 EGIHGGRSMAGGSKQDIGSAGSAEGRGGSSGGQGVDGGETLYLKAADDGN 228

[Close]
BLAST of CSPI02G02710 vs. TAIR10
Match: AT5G28640.1 (AT5G28640.1 SSXT family protein)

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-62
Identity = 155/241 (64.32%), Postives = 171/241 (70.95%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMA YY +NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSS--GMIQ--PGGHYIQHQQA---QQMTPQSLMAARS 120
           NLMYLAAIADSQPQP ++H+QY S+  GMIQ   G HY+Q QQA   QQMT QSLMAARS
Sbjct: 61  NLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARS 120

Query: 121 SMLYS-----QQPFSTLQQQAL-HGQLGMSS----GGGIGFNMLQNDAANAGGGNGGALG 180
           SMLY+     QQP++TLQ Q L H QLGMSS    GG  G ++LQ +A            
Sbjct: 121 SMLYAQQQQQQQPYATLQHQQLHHSQLGMSSSSGGGGSSGLHILQGEA------------ 180

Query: 181 GGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDG 225
            GGF DFG G              K +MG  G  EGRGGSS    GDGGETLYLKS+DDG
Sbjct: 181 -GGFHDFGRG--------------KPEMGSGGGGEGRGGSS----GDGGETLYLKSSDDG 210

[Close]
BLAST of CSPI02G02710 vs. TAIR10
Match: AT4G00850.1 (AT4G00850.1 GRF1-interacting factor 3)

HSP 1 Score: 83.2 bits (204), Expect = 2.3e-16
Identity = 88/244 (36.07%), Postives = 117/244 (47.95%), Query Frame = 1 

Query: 3   QHLMQMQPMMAAYY--SNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 62
           Q   QM PM+   +  +NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 2   QQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQK 61

Query: 63  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 122
           NLMYLAAIAD+QPQP A      +SG + P      +  + Q  P   M    ++  +QQ
Sbjct: 62  NLMYLAAIADAQPQPPAATL---TSGAMTPQA-MAPNPSSMQPPPSYFMQQHQAVGMAQQ 121

Query: 123 ----------------------PFSTLQQQALHGQLGMSSGGGIGFNMLQND-------- 182
                                 P   L QQA+ G +G+   G    N LQ+         
Sbjct: 122 IPPGIFPPRGPLQFGSPHQFLDPQQQLHQQAMQGHMGIRPMGLNNNNGLQHQMHHHETAL 181

Query: 183 AANAGGGNGGALGGGGFPDFGHGAASDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGD 215
           AAN  G N  +  GGG PD                G+     G   A+G+GGS+  HGG 
Sbjct: 182 AANNAGPNDAS--GGGKPD----------------GTNMSQSG---ADGQGGSAARHGGG 220

[Close]
BLAST of CSPI02G02710 vs. TAIR10
Match: AT1G01160.2 (AT1G01160.2 GRF1-interacting factor 2)

HSP 1 Score: 72.8 bits (177), Expect = 3.1e-13
Identity = 80/229 (34.93%), Postives = 111/229 (48.47%), Query Frame = 1 

Query: 2   QQHLMQMQPMMAAYY-SNNVTTDHIQQ--------------------------------- 61
           QQ   QM PM+ +   +NN+TT+ IQ+                                 
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKMLGGSGNFESGFQEWTLKLDACLMLLFCTFSWL 62

Query: 62  -YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP--------SAM 121
            YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QP P        +A+
Sbjct: 63  DYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAV 122

Query: 122 HAQYSS--SGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQ-------QPFSTLQQQA 178
            AQ ++  SGM QP  +++QH QA   +P  + A R  + +         Q    + QQA
Sbjct: 123 AAQMATPHSGM-QPPSYFMQHPQA---SPAGIFAPRGPLQFGSPLQFQDPQQQQQIHQQA 182

[Close]
BLAST of CSPI02G02710 vs. NCBI nr
Match: gi|449442961|ref|XP_004139249.1| (PREDICTED: GRF1-interacting factor 1 [Cucumis sativus])

HSP 1 Score: 417.9 bits (1073), Expect = 1.1e-113
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180
           PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]
BLAST of CSPI02G02710 vs. NCBI nr
Match: gi|659070713|ref|XP_008456296.1| (PREDICTED: GRF1-interacting factor 1 [Cucumis melo])

HSP 1 Score: 416.4 bits (1069), Expect = 3.2e-113
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180
           PFSTLQQQALHGQLGMSSGGGIGFNMLQNDA NAGGGNGGALGGGGFPDFGHGAASDSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAGNAGGGNGGALGGGGFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]
BLAST of CSPI02G02710 vs. NCBI nr
Match: gi|1009117529|ref|XP_015875366.1| (PREDICTED: GRF1-interacting factor 1 [Ziziphus jujuba])

HSP 1 Score: 347.4 bits (890), Expect = 1.8e-92
Identity = 191/225 (84.89%), Postives = 201/225 (89.33%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYI-QHQQAQQMTPQSLMAARSSMLYSQ 120
           NLMYLAAIADSQPQP  +HAQY SSG++QPG HY+ QHQQAQQMTPQSLMAARSSMLYSQ
Sbjct: 61  NLMYLAAIADSQPQPPTIHAQYPSSGIMQPGAHYMQQHQQAQQMTPQSLMAARSSMLYSQ 120

Query: 121 QPFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSL 180
           Q FSTLQQQALHGQLGMSSGG  G +MLQ+D  NAGG   G LG GGFPDFG G+A + L
Sbjct: 121 QSFSTLQQQALHGQLGMSSGGSAGLHMLQSDTGNAGG--NGPLGTGGFPDFGRGSAGEGL 180

Query: 181 HRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           HR +AGGSKQDMG  GSAEGRGGSSG HGGDGGETLYLKSADDGN
Sbjct: 181 HRGMAGGSKQDMGSAGSAEGRGGSSGGHGGDGGETLYLKSADDGN 223

[Close]
BLAST of CSPI02G02710 vs. NCBI nr
Match: gi|590642355|ref|XP_007030495.1| (SSXT family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 335.5 bits (859), Expect = 7.2e-89
Identity = 185/227 (81.50%), Postives = 204/227 (89.87%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQP  MHAQ+ SSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPPNMHAQFPSSGIMQPGGHYMQHQQAQQMTPQSLMAARSSMLYAQQ 120

Query: 121 PFSTL-QQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSL 180
           PFS L QQQALH QLGMSSGG  G +MLQ++A+ AGG   GALG GGFPDFG G++ + +
Sbjct: 121 PFSALQQQQALHSQLGMSSGGNTGLHMLQSEASTAGG--SGALGAGGFPDFGRGSSGEGM 180

Query: 181 H--RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           H  R++AGGSKQD+G +GSAEGRGGSSG  GGDGGETLYLK+ADDGN
Sbjct: 181 HAGRAMAGGSKQDIGSSGSAEGRGGSSGGQGGDGGETLYLKAADDGN 225

[Close]
BLAST of CSPI02G02710 vs. NCBI nr
Match: gi|703121167|ref|XP_010102263.1| (hypothetical protein L484_024545 [Morus notabilis])

HSP 1 Score: 335.1 bits (858), Expect = 9.4e-89
Identity = 184/224 (82.14%), Postives = 196/224 (87.50%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQP  MHAQY SS M+QPG HY+QHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPPTMHAQYPSSSMMQPGAHYMQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180
           PF  LQQQALHGQLGMSSGG  G +M+Q D  +AGG   G LG GGFPDFG G+A + LH
Sbjct: 121 PFPALQQQALHGQLGMSSGGSSGLHMMQGDIGSAGG--SGQLGAGGFPDFGRGSAGEGLH 180

Query: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 225
           R +AGGSKQD+G +GSAEGRGGSS    GDGGETLYLKSADDGN
Sbjct: 181 RGMAGGSKQDIGSSGSAEGRGGSS----GDGGETLYLKSADDGN 218

The following BLAST results are available for this feature:
BLAST of CSPI02G02710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GIF1_ARATH2.8e-6164.32GRF1-interacting factor 1 OS=Arabidopsis thaliana GN=GIF1 PE=1 SV=1[more]
GIF2_ARATH3.3e-1741.03GRF1-interacting factor 2 OS=Arabidopsis thaliana GN=GIF2 PE=1 SV=1[more]
GIF3_ARATH4.0e-1536.07GRF1-interacting factor 3 OS=Arabidopsis thaliana GN=GIF3 PE=1 SV=1[more]
S18L2_HUMAN2.6e-0653.70SS18-like protein 2 OS=Homo sapiens GN=SS18L2 PE=3 SV=1[more]
S18L2_MOUSE5.8e-0653.85SS18-like protein 2 OS=Mus musculus GN=Ss18l2 PE=3 SV=1[more]
BLAST of CSPI02G02710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LL92_CUCSA7.7e-114100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010170 PE=4 SV=1[more]
A0A061F2S4_THECC5.0e-8981.50SSXT family protein isoform 1 OS=Theobroma cacao GN=TCM_026261 PE=4 SV=1[more]
W9RHN8_9ROSA6.5e-8982.14Uncharacterized protein OS=Morus notabilis GN=L484_024545 PE=4 SV=1[more]
A0A061F252_THECC1.2e-8781.14SSXT family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_026261 PE=4 S... [more]
A0A0D2TMU1_GOSRA9.8e-8579.13Uncharacterized protein OS=Gossypium raimondii GN=B456_007G279600 PE=4 SV=1[more]
BLAST of CSPI02G02710 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G28640.11.6e-6264.32 SSXT family protein[more]
AT4G00850.12.3e-1636.07 GRF1-interacting factor 3[more]
AT1G01160.23.1e-1334.93 GRF1-interacting factor 2[more]
BLAST of CSPI02G02710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449442961|ref|XP_004139249.1|1.1e-113100.00PREDICTED: GRF1-interacting factor 1 [Cucumis sativus][more]
gi|659070713|ref|XP_008456296.1|3.2e-11399.55PREDICTED: GRF1-interacting factor 1 [Cucumis melo][more]
gi|1009117529|ref|XP_015875366.1|1.8e-9284.89PREDICTED: GRF1-interacting factor 1 [Ziziphus jujuba][more]
gi|590642355|ref|XP_007030495.1|7.2e-8981.50SSXT family protein isoform 1 [Theobroma cacao][more]
gi|703121167|ref|XP_010102263.1|9.4e-8982.14hypothetical protein L484_024545 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007726SS18_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009955 adaxial/abaxial pattern specification
biological_process GO:0048366 leaf development
biological_process GO:0006397 mRNA processing
biological_process GO:0008380 RNA splicing
biological_process GO:0008033 tRNA processing
biological_process GO:1903506 regulation of nucleic acid-templated transcription
biological_process GO:0045893 positive regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0003723 RNA binding
molecular_function GO:0003713 transcription coactivator activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G02710.1CSPI02G02710.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007726SS18 familyPANTHERPTHR23107SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEINcoord: 1..224
score: 2.4E
IPR007726SS18 familyPFAMPF05030SSXTcoord: 19..76
score: 2.6
NoneNo IPR availablePANTHERPTHR23107:SF6GRF1-INTERACTING FACTOR 1coord: 1..224
score: 2.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G02710Cla013633Watermelon (97103) v1cpiwmB149
CSPI02G02710Csa2G010170Cucumber (Chinese Long) v2cpicuB065
CSPI02G02710MELO3C004407Melon (DHL92) v3.5.1cpimeB139
CSPI02G02710ClCG02G016890Watermelon (Charleston Gray)cpiwcgB128
CSPI02G02710Lsi11G004190Bottle gourd (USVL1VR-Ls)cpilsiB096
CSPI02G02710MELO3C004407.2Melon (DHL92) v3.6.1cpimedB132
CSPI02G02710CsaV3_2G003880Cucumber (Chinese Long) v3cpicucB080
CSPI02G02710Cla97C02G042620Watermelon (97103) v2cpiwmbB120
CSPI02G02710BhiUN66G23Wax gourdcpiwgoB195
CSPI02G02710Cucsa.133040Cucumber (Gy14) v1cgycpiB187
CSPI02G02710CmaCh05G012230Cucurbita maxima (Rimu)cmacpiB800
CSPI02G02710CmaCh12G011390Cucurbita maxima (Rimu)cmacpiB174
CSPI02G02710CmoCh12G011580Cucurbita moschata (Rifu)cmocpiB159
CSPI02G02710CmoCh05G012510Cucurbita moschata (Rifu)cmocpiB787
CSPI02G02710Cp4.1LG07g09690Cucurbita pepo (Zucchini)cpecpiB821
CSPI02G02710Cp4.1LG11g10100Cucurbita pepo (Zucchini)cpecpiB100
CSPI02G02710CsGy2G002810Cucumber (Gy14) v2cgybcpiB056
CSPI02G02710Carg22999Silver-seed gourdcarcpiB1109
CSPI02G02710Carg17432Silver-seed gourdcarcpiB0286
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G02710Wild cucumber (PI 183967)cpicpiB062
CSPI02G02710Cucumber (Chinese Long) v2cpicuB074
CSPI02G02710Melon (DHL92) v3.5.1cpimeB146
CSPI02G02710Watermelon (97103) v1cpiwmB127
CSPI02G02710Melon (DHL92) v3.6.1cpimedB138
CSPI02G02710Cucumber (Gy14) v2cgybcpiB103
CSPI02G02710Cucumber (Chinese Long) v3cpicucB092
CSPI02G02710Watermelon (97103) v2cpiwmbB136
CSPI02G02710Wax gourdcpiwgoB137