Cla97C02G042620 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCCTATTATCCCAACAACGTCACTACTGATCACATTCAACAGGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTTTTTATTTTAGTCTTTTAATCAATCTATCTATCCATTTCTATTTTTTTTTCATTCATTTCCCCTCTTTCTTTCAAGTGGGGTTTCTTTGTTTTTCAACTTAGGGATGATTGTCTTTCTTCCCTTTTCCACTTTTCTTCCTTTTTAAAATACTGGGTTTTGTTTAGTTTGCTTTCTTTCACGTGCCCTTGTCTCTATTGAATGGATTTCATTATCTAATTACAAAAGCTGAGACCAATCCATCTATGGGTATCTTGTTTATTTCCATCTCTTTTCTTGATTAAGTATTTGTTTCCATGTTGGTCTAAAGATAATCACTGTGTTTCTTTCAATTGCATGATTGACTTCTGCCTTTTAGCCTTAATCTTAATGGAAAAGGAAGCTGAACTGGTTGGATAGTGGCTTTTTCATGCTTTTTTTCCCTCTCTCTATCAATCAAGTGGGGGAAAAAGTGGCATGTTGGGACTTAAAAATGTTGAGAGCTTGAGCTTGATTTAGATGCTTGAAATATCCTTGATTAAGTGACTTATTCGGTAGTCTTTTTCAAAGAAAAAAAAAAAGTGGCTTATTGGGTAATGTATGAAACAGTTGAGAGCTTGAACCCTTTGAGGATCACAAGTTTGTTAGTTCTTATATTGATTATTCTTTTATTCCTTTTCTCTGGTTAACTTTGTAATGTTATCGTTTTACATTGACATAAGCATGTTGGAAGTTTAAATCTCATTTCAATTCATTGCATCTTAACTTGTTGCAAATGAATGTACTATTGAAGTACTTAAACGTGTTTTCTAACTTCTATTATATCTTAACTTAATATTTGGGGTGTGATCGAATGTTCTCATAACCCACCTTATATTCTTAGCCACCCAAGATATAATAATTCAATGGCTTTCTTGAGAACTAAGTGTTAATAGGATCAAGTTGTTGTCATATGAGATTAGTCGATGTGCGGGTAAGGTGTCTTGAATACTCACACACACACATATATAATATATATATAAAGAAGTAAGCTTCCTTTTATCTTTTAAGTTGAAAAATATTAATGTGCTAAAGTATCAAACTGATGGGGGTAATGCAAGTCTTTTCTTAGCTTGACACTTCTTGTTGATGATTTTTTTTTTAATTATTCTGTGATGAATTATGATTAGGATATTGTAAAAGTAAATCTATATAAGTAGAGAAGTTAAAAGTGTTCATATATTATCTTTTATCATGCTAAGATGGGAGAGAGAAGCTTGAATAGTGACTGGTCAATCATGAAACAGTATTTTAAGTTGCTGTCTAGCTCTGATTCTTCTGAGTTGCTTTCAAGGATCATACATTTCATTACATTCAGCACTTGCTTTTTAAGGTTTATTATGTCTGATCAATCAAATCTAACAATATATATGCTACGTATTTGGTAGATTCTGCTCAATTTTAGGAGTTTCAATCTGTTAATTTTTTGTATGTCCAAAATAAGCAATTCTTGTTTCCAAGAATGACCTGTTAAACTAGTTAATATGTTCCTTTTCTTTATTTCCTTTCTTCTTATTTTACAGACACCAATACTATAGTTATTTAATTTTTCATCCAACAGCGATTTTCGGCAACTTCTTAACTTGATATTTTCATAATTTTCTAACTTATTATTTGATAATCCATGTTGCAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAAAGCCAAAACTCGGGAAAATTGAATGAATGTGCAGAGTAAGAATTTATGCTTTCTCTAATGATTCTACCTAGTATAAATGAATGCTATTGCAATGCCAATTTTTTTTCCTTTGCATGTGACTGTTTTTGTTGCATTCGTTCACAAATTATCCTCTCTAGCTCTCGCTACATATCTTTTTTCTCTCTTCCTTTCTGTTTATATTGTGTTAATTGTATAATTCAGCATATATCTGTGGCTGTAATGATCCAAGGAAGTATGTAGCAGAAATGTTGCATTACATCACTTTTTATGTTGAGTGTCATAATGTGAATTTTCTTTTTCAGTTTAATATAATGGGTTCTAGGATGAAGAAACATTTTGATATCTAGCCTGGGGAAAATCTTGTTCTAGTATTGTTTAAACAGGCTTCTTTTGGAGGTTTTCTTTGGTAGTGATCCTCCCTGATAGTACTGATAAGGCCACTGTCTCTTTCTGCTTGATCATTTTTGTATTTGTTTCAAAATCAGATTCATGGTGATCATAGTTCTACTTGAGTGTGTAAAAATGTTCACGGATGAAAAGTGGAATGATATATAACCCTTCACCAAATATTCAATTTCTGAGTCGGATGCAGGGAAACTAAAACATTATCATATGATTTATTCGAAAAGAAGCCCAAAAATGAAAATATCTAAATTGGTTGTTAAAGCAGGGTATATCCTAGTAGTATGAACTTATCCATCTTCCATAAAAGAGTGGAATAACATCAGGGTTCTTCGATTAGTTTGATTTCAATACACATCAAGTGATGATACGATATCGACTGTAGTCCCTGGCTTCCGAGACTGGTAACAGGGATTTGATTCATGTTTTTCAATTATCTTGCATTTCTAGACTTCATTTGGTGATATGGTTATTAGTTTTGAAGTGTAAAAGTAAGTCTCTTACATTTTTCTCTGCAGGAATCAAGCTAGGCTACAGAGAAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGGTATGGACATAATTGTTTGAAGATGTAAATTTATCCAATCACTAGCTGTGCATAGTTATAGAAAATCTGTTGTCGATACTGTTAGTTTAACACCCTGATATTTTGCTTTCAAGAGAACTCTTGGCTGTAGGAACCATTTCCACTACATACATTTTTCCTCCAACACTCACTTTGGCCACGATTGTGATCTGAAACTCGAGTTCTTCAAGGCCGTTATCCTCTGGATTTAGACAGATGTGCTTTGTTTGACCTACTTGATACTAAGGATTTTAAGTTATTTAAGTTACAGATTTAGGTGCTTTGTCCAAACATGTCAAAGTCTTCACTTTCTTTTTCTCTTTTTCCCTTTTTCCTAACCTTCAAACTAAATTGAATTGGGACTAGTCTAAGATGCTTTGCTTTTGTCATGTTCTCTTCAGTACTCTTCCAGTGGCATAATCCAACCAGGAGGGCATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCACAATCTCTGATGGCCGCCCGGTCCTCTATGTTGTACTCTCAGCAGCCATTTTCGACACTGCAGCAGCAAGCTTTGCACGGCCAACTCGGGATGAACTCCGGAGGAGGCATAGGATTCAATATGCTGCAAAATGATGCCACCAATGCAGGAGGAGGAAATGGAGCACTCGGAGGAGGAGGCTTTCCAGATTTTGGCCATGGCGCTGCAGGTGACAGCTTGCACCGGAGCCTAGCCGGTGGGAGCAAGCAAGATATGGGAGGAACCGGTTCTGCCGAGGGACGAGGAGGGAGCTCCGGGAGCCATGGTGGTGATGGAGGCGAGACTCTCTACTTGAAATCAGCTGATGATGGGAACTGA ATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCCTATTATCCCAACAACGTCACTACTGATCACATTCAACAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAAAGCCAAAACTCGGGAAAATTGAATGAATGTGCAGAGAATCAAGCTAGGCTACAGAGAAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGTACTCTTCCAGTGGCATAATCCAACCAGGAGGGCATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCACAATCTCTGATGGCCGCCCGGTCCTCTATGTTGTACTCTCAGCAGCCATTTTCGACACTGCAGCAGCAAGCTTTGCACGGCCAACTCGGGATGAACTCCGGAGGAGGCATAGGATTCAATATGCTGCAAAATGATGCCACCAATGCAGGAGGAGGAAATGGAGCACTCGGAGGAGGAGGCTTTCCAGATTTTGGCCATGGCGCTGCAGGTGACAGCTTGCACCGGAGCCTAGCCGGTGGGAGCAAGCAAGATATGGGAGGAACCGGTTCTGCCGAGGGACGAGGAGGGAGCTCCGGGAGCCATGGTGGTGATGGAGGCGAGACTCTCTACTTGAAATCAGCTGATGATGGGAACTGA ATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCCTATTATCCCAACAACGTCACTACTGATCACATTCAACAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAAAGCCAAAACTCGGGAAAATTGAATGAATGTGCAGAGAATCAAGCTAGGCTACAGAGAAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGTACTCTTCCAGTGGCATAATCCAACCAGGAGGGCATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCACAATCTCTGATGGCCGCCCGGTCCTCTATGTTGTACTCTCAGCAGCCATTTTCGACACTGCAGCAGCAAGCTTTGCACGGCCAACTCGGGATGAACTCCGGAGGAGGCATAGGATTCAATATGCTGCAAAATGATGCCACCAATGCAGGAGGAGGAAATGGAGCACTCGGAGGAGGAGGCTTTCCAGATTTTGGCCATGGCGCTGCAGGTGACAGCTTGCACCGGAGCCTAGCCGGTGGGAGCAAGCAAGATATGGGAGGAACCGGTTCTGCCGAGGGACGAGGAGGGAGCTCCGGGAGCCATGGTGGTGATGGAGGCGAGACTCTCTACTTGAAATCAGCTGATGATGGGAACTGA MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGALGGGGFPDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
BLAST of Cla97C02G042620 vs. NCBI nr
Match: XP_022965913.1 (GRF1-interacting factor 1-like [Cucurbita maxima]) HSP 1 Score: 362.1 bits (928), Expect = 1.4e-96 Identity = 210/223 (94.17%), Postives = 214/223 (95.96%), Query Frame = 0
BLAST of Cla97C02G042620 vs. NCBI nr
Match: XP_004139249.1 (PREDICTED: GRF1-interacting factor 1 [Cucumis sativus] >KGN60781.1 hypothetical protein Csa_2G010170 [Cucumis sativus]) HSP 1 Score: 342.8 bits (878), Expect = 8.7e-91 Identity = 207/224 (92.41%), Postives = 209/224 (93.30%), Query Frame = 0
BLAST of Cla97C02G042620 vs. NCBI nr
Match: XP_008456296.1 (PREDICTED: GRF1-interacting factor 1 [Cucumis melo]) HSP 1 Score: 342.0 bits (876), Expect = 1.5e-90 Identity = 207/224 (92.41%), Postives = 209/224 (93.30%), Query Frame = 0
BLAST of Cla97C02G042620 vs. NCBI nr
Match: XP_022143216.1 (GRF1-interacting factor 1 [Momordica charantia]) HSP 1 Score: 337.4 bits (864), Expect = 3.6e-89 Identity = 204/225 (90.67%), Postives = 210/225 (93.33%), Query Frame = 0
BLAST of Cla97C02G042620 vs. NCBI nr
Match: XP_022937932.1 (GRF1-interacting factor 1-like [Cucurbita moschata]) HSP 1 Score: 336.7 bits (862), Expect = 6.2e-89 Identity = 202/224 (90.18%), Postives = 206/224 (91.96%), Query Frame = 0
BLAST of Cla97C02G042620 vs. TrEMBL
Match: tr|A0A0A0LL92|A0A0A0LL92_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G010170 PE=4 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 5.7e-91 Identity = 207/224 (92.41%), Postives = 209/224 (93.30%), Query Frame = 0
BLAST of Cla97C02G042620 vs. TrEMBL
Match: tr|A0A1S3C305|A0A1S3C305_CUCME (GRF1-interacting factor 1 OS=Cucumis melo OX=3656 GN=LOC103496282 PE=4 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 9.8e-91 Identity = 207/224 (92.41%), Postives = 209/224 (93.30%), Query Frame = 0
BLAST of Cla97C02G042620 vs. TrEMBL
Match: tr|W9RHN8|W9RHN8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_024545 PE=4 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 1.3e-82 Identity = 175/223 (78.48%), Postives = 189/223 (84.75%), Query Frame = 0
BLAST of Cla97C02G042620 vs. TrEMBL
Match: tr|A0A061F2S4|A0A061F2S4_THECC (SSXT family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_026261 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 8.3e-82 Identity = 190/226 (84.07%), Postives = 209/226 (92.48%), Query Frame = 0
BLAST of Cla97C02G042620 vs. TrEMBL
Match: tr|A0A061F252|A0A061F252_THECC (SSXT family protein isoform 2 (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_026261 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 2.0e-80 Identity = 190/227 (83.70%), Postives = 209/227 (92.07%), Query Frame = 0
BLAST of Cla97C02G042620 vs. Swiss-Prot
Match: sp|Q8L8A5|GIF1_ARATH (GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.6e-35 Identity = 75/85 (88.24%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of Cla97C02G042620 vs. Swiss-Prot
Match: sp|Q93VH6|GIF3_ARATH (GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 5.1e-18 Identity = 66/161 (40.99%), Postives = 88/161 (54.66%), Query Frame = 0
BLAST of Cla97C02G042620 vs. Swiss-Prot
Match: sp|Q9MAL9|GIF2_ARATH (GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.0e-10 Identity = 65/185 (35.14%), Postives = 86/185 (46.49%), Query Frame = 0
BLAST of Cla97C02G042620 vs. Swiss-Prot
Match: sp|Q9UHA2|S18L2_HUMAN (SS18-like protein 2 OS=Homo sapiens OX=9606 GN=SS18L2 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.0e-06 Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 0
BLAST of Cla97C02G042620 vs. Swiss-Prot
Match: sp|Q15532|SSXT_HUMAN (Protein SSXT OS=Homo sapiens OX=9606 GN=SS18 PE=1 SV=3) HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06 Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 0
BLAST of Cla97C02G042620 vs. TAIR10
Match: AT5G28640.1 (SSXT family protein) HSP 1 Score: 151.0 bits (380), Expect = 8.8e-37 Identity = 75/85 (88.24%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of Cla97C02G042620 vs. TAIR10
Match: AT4G00850.1 (GRF1-interacting factor 3) HSP 1 Score: 92.8 bits (229), Expect = 2.8e-19 Identity = 66/161 (40.99%), Postives = 88/161 (54.66%), Query Frame = 0
BLAST of Cla97C02G042620 vs. TAIR10
Match: AT1G01160.2 (GRF1-interacting factor 2) HSP 1 Score: 49.7 bits (117), Expect = 2.8e-06 Identity = 65/219 (29.68%), Postives = 86/219 (39.27%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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