Cla97C02G042620 (gene) Watermelon (97103) v2

NameCla97C02G042620
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionGRF1-interacting factor 1
LocationCla97Chr02 : 30809325 .. 30813019 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCCTATTATCCCAACAACGTCACTACTGATCACATTCAACAGGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTTTTTATTTTAGTCTTTTAATCAATCTATCTATCCATTTCTATTTTTTTTTCATTCATTTCCCCTCTTTCTTTCAAGTGGGGTTTCTTTGTTTTTCAACTTAGGGATGATTGTCTTTCTTCCCTTTTCCACTTTTCTTCCTTTTTAAAATACTGGGTTTTGTTTAGTTTGCTTTCTTTCACGTGCCCTTGTCTCTATTGAATGGATTTCATTATCTAATTACAAAAGCTGAGACCAATCCATCTATGGGTATCTTGTTTATTTCCATCTCTTTTCTTGATTAAGTATTTGTTTCCATGTTGGTCTAAAGATAATCACTGTGTTTCTTTCAATTGCATGATTGACTTCTGCCTTTTAGCCTTAATCTTAATGGAAAAGGAAGCTGAACTGGTTGGATAGTGGCTTTTTCATGCTTTTTTTCCCTCTCTCTATCAATCAAGTGGGGGAAAAAGTGGCATGTTGGGACTTAAAAATGTTGAGAGCTTGAGCTTGATTTAGATGCTTGAAATATCCTTGATTAAGTGACTTATTCGGTAGTCTTTTTCAAAGAAAAAAAAAAAGTGGCTTATTGGGTAATGTATGAAACAGTTGAGAGCTTGAACCCTTTGAGGATCACAAGTTTGTTAGTTCTTATATTGATTATTCTTTTATTCCTTTTCTCTGGTTAACTTTGTAATGTTATCGTTTTACATTGACATAAGCATGTTGGAAGTTTAAATCTCATTTCAATTCATTGCATCTTAACTTGTTGCAAATGAATGTACTATTGAAGTACTTAAACGTGTTTTCTAACTTCTATTATATCTTAACTTAATATTTGGGGTGTGATCGAATGTTCTCATAACCCACCTTATATTCTTAGCCACCCAAGATATAATAATTCAATGGCTTTCTTGAGAACTAAGTGTTAATAGGATCAAGTTGTTGTCATATGAGATTAGTCGATGTGCGGGTAAGGTGTCTTGAATACTCACACACACACATATATAATATATATATAAAGAAGTAAGCTTCCTTTTATCTTTTAAGTTGAAAAATATTAATGTGCTAAAGTATCAAACTGATGGGGGTAATGCAAGTCTTTTCTTAGCTTGACACTTCTTGTTGATGATTTTTTTTTTAATTATTCTGTGATGAATTATGATTAGGATATTGTAAAAGTAAATCTATATAAGTAGAGAAGTTAAAAGTGTTCATATATTATCTTTTATCATGCTAAGATGGGAGAGAGAAGCTTGAATAGTGACTGGTCAATCATGAAACAGTATTTTAAGTTGCTGTCTAGCTCTGATTCTTCTGAGTTGCTTTCAAGGATCATACATTTCATTACATTCAGCACTTGCTTTTTAAGGTTTATTATGTCTGATCAATCAAATCTAACAATATATATGCTACGTATTTGGTAGATTCTGCTCAATTTTAGGAGTTTCAATCTGTTAATTTTTTGTATGTCCAAAATAAGCAATTCTTGTTTCCAAGAATGACCTGTTAAACTAGTTAATATGTTCCTTTTCTTTATTTCCTTTCTTCTTATTTTACAGACACCAATACTATAGTTATTTAATTTTTCATCCAACAGCGATTTTCGGCAACTTCTTAACTTGATATTTTCATAATTTTCTAACTTATTATTTGATAATCCATGTTGCAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAAAGCCAAAACTCGGGAAAATTGAATGAATGTGCAGAGTAAGAATTTATGCTTTCTCTAATGATTCTACCTAGTATAAATGAATGCTATTGCAATGCCAATTTTTTTTCCTTTGCATGTGACTGTTTTTGTTGCATTCGTTCACAAATTATCCTCTCTAGCTCTCGCTACATATCTTTTTTCTCTCTTCCTTTCTGTTTATATTGTGTTAATTGTATAATTCAGCATATATCTGTGGCTGTAATGATCCAAGGAAGTATGTAGCAGAAATGTTGCATTACATCACTTTTTATGTTGAGTGTCATAATGTGAATTTTCTTTTTCAGTTTAATATAATGGGTTCTAGGATGAAGAAACATTTTGATATCTAGCCTGGGGAAAATCTTGTTCTAGTATTGTTTAAACAGGCTTCTTTTGGAGGTTTTCTTTGGTAGTGATCCTCCCTGATAGTACTGATAAGGCCACTGTCTCTTTCTGCTTGATCATTTTTGTATTTGTTTCAAAATCAGATTCATGGTGATCATAGTTCTACTTGAGTGTGTAAAAATGTTCACGGATGAAAAGTGGAATGATATATAACCCTTCACCAAATATTCAATTTCTGAGTCGGATGCAGGGAAACTAAAACATTATCATATGATTTATTCGAAAAGAAGCCCAAAAATGAAAATATCTAAATTGGTTGTTAAAGCAGGGTATATCCTAGTAGTATGAACTTATCCATCTTCCATAAAAGAGTGGAATAACATCAGGGTTCTTCGATTAGTTTGATTTCAATACACATCAAGTGATGATACGATATCGACTGTAGTCCCTGGCTTCCGAGACTGGTAACAGGGATTTGATTCATGTTTTTCAATTATCTTGCATTTCTAGACTTCATTTGGTGATATGGTTATTAGTTTTGAAGTGTAAAAGTAAGTCTCTTACATTTTTCTCTGCAGGAATCAAGCTAGGCTACAGAGAAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGGTATGGACATAATTGTTTGAAGATGTAAATTTATCCAATCACTAGCTGTGCATAGTTATAGAAAATCTGTTGTCGATACTGTTAGTTTAACACCCTGATATTTTGCTTTCAAGAGAACTCTTGGCTGTAGGAACCATTTCCACTACATACATTTTTCCTCCAACACTCACTTTGGCCACGATTGTGATCTGAAACTCGAGTTCTTCAAGGCCGTTATCCTCTGGATTTAGACAGATGTGCTTTGTTTGACCTACTTGATACTAAGGATTTTAAGTTATTTAAGTTACAGATTTAGGTGCTTTGTCCAAACATGTCAAAGTCTTCACTTTCTTTTTCTCTTTTTCCCTTTTTCCTAACCTTCAAACTAAATTGAATTGGGACTAGTCTAAGATGCTTTGCTTTTGTCATGTTCTCTTCAGTACTCTTCCAGTGGCATAATCCAACCAGGAGGGCATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCACAATCTCTGATGGCCGCCCGGTCCTCTATGTTGTACTCTCAGCAGCCATTTTCGACACTGCAGCAGCAAGCTTTGCACGGCCAACTCGGGATGAACTCCGGAGGAGGCATAGGATTCAATATGCTGCAAAATGATGCCACCAATGCAGGAGGAGGAAATGGAGCACTCGGAGGAGGAGGCTTTCCAGATTTTGGCCATGGCGCTGCAGGTGACAGCTTGCACCGGAGCCTAGCCGGTGGGAGCAAGCAAGATATGGGAGGAACCGGTTCTGCCGAGGGACGAGGAGGGAGCTCCGGGAGCCATGGTGGTGATGGAGGCGAGACTCTCTACTTGAAATCAGCTGATGATGGGAACTGA

mRNA sequence

ATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCCTATTATCCCAACAACGTCACTACTGATCACATTCAACAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAAAGCCAAAACTCGGGAAAATTGAATGAATGTGCAGAGAATCAAGCTAGGCTACAGAGAAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGTACTCTTCCAGTGGCATAATCCAACCAGGAGGGCATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCACAATCTCTGATGGCCGCCCGGTCCTCTATGTTGTACTCTCAGCAGCCATTTTCGACACTGCAGCAGCAAGCTTTGCACGGCCAACTCGGGATGAACTCCGGAGGAGGCATAGGATTCAATATGCTGCAAAATGATGCCACCAATGCAGGAGGAGGAAATGGAGCACTCGGAGGAGGAGGCTTTCCAGATTTTGGCCATGGCGCTGCAGGTGACAGCTTGCACCGGAGCCTAGCCGGTGGGAGCAAGCAAGATATGGGAGGAACCGGTTCTGCCGAGGGACGAGGAGGGAGCTCCGGGAGCCATGGTGGTGATGGAGGCGAGACTCTCTACTTGAAATCAGCTGATGATGGGAACTGA

Coding sequence (CDS)

ATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCCTATTATCCCAACAACGTCACTACTGATCACATTCAACAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAAAGCCAAAACTCGGGAAAATTGAATGAATGTGCAGAGAATCAAGCTAGGCTACAGAGAAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGTACTCTTCCAGTGGCATAATCCAACCAGGAGGGCATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCACAATCTCTGATGGCCGCCCGGTCCTCTATGTTGTACTCTCAGCAGCCATTTTCGACACTGCAGCAGCAAGCTTTGCACGGCCAACTCGGGATGAACTCCGGAGGAGGCATAGGATTCAATATGCTGCAAAATGATGCCACCAATGCAGGAGGAGGAAATGGAGCACTCGGAGGAGGAGGCTTTCCAGATTTTGGCCATGGCGCTGCAGGTGACAGCTTGCACCGGAGCCTAGCCGGTGGGAGCAAGCAAGATATGGGAGGAACCGGTTCTGCCGAGGGACGAGGAGGGAGCTCCGGGAGCCATGGTGGTGATGGAGGCGAGACTCTCTACTTGAAATCAGCTGATGATGGGAACTGA

Protein sequence

MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGALGGGGFPDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
BLAST of Cla97C02G042620 vs. NCBI nr
Match: XP_022965913.1 (GRF1-interacting factor 1-like [Cucurbita maxima])

HSP 1 Score: 362.1 bits (928), Expect = 1.4e-96
Identity = 210/223 (94.17%), Postives = 214/223 (95.96%), Query Frame = 0

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGALGGGGFPDFGHGAAGDSLHR 180
           PFS+LQQQALH QLGM+SGGGIGFNMLQNDA NAGG  GALGGGGFPDF H AA DSLHR
Sbjct: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGFPDFSHNAAADSLHR 180

Query: 181 SLAGGSKQDMGXXXXXXXXXXXXXXXXXXXXETLYLKSADDGN 224
           SLAGGSKQDMG  XXXXXXXXXXXXXXXXXXETLYLKSADDGN
Sbjct: 181 SLAGGSKQDMGGTXXXXXXXXXXXXXXXXXXETLYLKSADDGN 223

BLAST of Cla97C02G042620 vs. NCBI nr
Match: XP_004139249.1 (PREDICTED: GRF1-interacting factor 1 [Cucumis sativus] >KGN60781.1 hypothetical protein Csa_2G010170 [Cucumis sativus])

HSP 1 Score: 342.8 bits (878), Expect = 8.7e-91
Identity = 207/224 (92.41%), Postives = 209/224 (93.30%), Query Frame = 0

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAG-GGNGALGGGGFPDFGHGAAGDSLH 180
           PFSTLQQQALHGQLGM+SGGGIGFNMLQNDA NAG           FPDFGHGAA DSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGXXXXXXXXXXXFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGXXXXXXXXXXXXXXXXXXXXETLYLKSADDGN 224
           RSLAGGSKQDMG XXXXXXXXXXXXXXXXXXXETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGXXXXXXXXXXXXXXXXXXXETLYLKSADDGN 224

BLAST of Cla97C02G042620 vs. NCBI nr
Match: XP_008456296.1 (PREDICTED: GRF1-interacting factor 1 [Cucumis melo])

HSP 1 Score: 342.0 bits (876), Expect = 1.5e-90
Identity = 207/224 (92.41%), Postives = 209/224 (93.30%), Query Frame = 0

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAG-GGNGALGGGGFPDFGHGAAGDSLH 180
           PFSTLQQQALHGQLGM+SGGGIGFNMLQNDA NAG           FPDFGHGAA DSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAGNAGXXXXXXXXXXXFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGXXXXXXXXXXXXXXXXXXXXETLYLKSADDGN 224
           RSLAGGSKQDMG XXXXXXXXXXXXXXXXXXXETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGXXXXXXXXXXXXXXXXXXXETLYLKSADDGN 224

BLAST of Cla97C02G042620 vs. NCBI nr
Match: XP_022143216.1 (GRF1-interacting factor 1 [Momordica charantia])

HSP 1 Score: 337.4 bits (864), Expect = 3.6e-89
Identity = 204/225 (90.67%), Postives = 210/225 (93.33%), Query Frame = 0

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQ 120

Query: 121 PFSTL-QQQALHGQLGMNSGGGIGFNMLQNDATNAGGGN-GALGGGGFPDFGHGAAGDSL 180
            FS L QQQALH QLGM+SGGGIGFNMLQND +NAGGGN GALG GGFPDFGH AAGDSL
Sbjct: 121 QFSALQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSL 180

Query: 181 HRSLAGGSKQDMGXXXXXXXXXXXXXXXXXXXXETLYLKSADDGN 224
           HR LAGGSK    XXXXXXXXXXXXXXXXXXXX TLYLK+ADDGN
Sbjct: 181 HRGLAGGSKXXXXXXXXXXXXXXXXXXXXXXXXXTLYLKAADDGN 225

BLAST of Cla97C02G042620 vs. NCBI nr
Match: XP_022937932.1 (GRF1-interacting factor 1-like [Cucurbita moschata])

HSP 1 Score: 336.7 bits (862), Expect = 6.2e-89
Identity = 202/224 (90.18%), Postives = 206/224 (91.96%), Query Frame = 0

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAG-GGNGALGGGGFPDFGHGAAGDSLH 180
           PFS+LQQQALH QLGM+SGGGIGFNMLQNDA NAG           FPDF H AA DSLH
Sbjct: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANAGXXXXXXXXXXXFPDFSHNAAADSLH 180

Query: 181 RSLAGGSKQDMGXXXXXXXXXXXXXXXXXXXXETLYLKSADDGN 224
           RSLAGGSKQDMG  XXXXXXXXXXXXXXXXXXETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTXXXXXXXXXXXXXXXXXXETLYLKSADDGN 224

BLAST of Cla97C02G042620 vs. TrEMBL
Match: tr|A0A0A0LL92|A0A0A0LL92_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G010170 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 5.7e-91
Identity = 207/224 (92.41%), Postives = 209/224 (93.30%), Query Frame = 0

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAG-GGNGALGGGGFPDFGHGAAGDSLH 180
           PFSTLQQQALHGQLGM+SGGGIGFNMLQNDA NAG           FPDFGHGAA DSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGXXXXXXXXXXXFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGXXXXXXXXXXXXXXXXXXXXETLYLKSADDGN 224
           RSLAGGSKQDMG XXXXXXXXXXXXXXXXXXXETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGXXXXXXXXXXXXXXXXXXXETLYLKSADDGN 224

BLAST of Cla97C02G042620 vs. TrEMBL
Match: tr|A0A1S3C305|A0A1S3C305_CUCME (GRF1-interacting factor 1 OS=Cucumis melo OX=3656 GN=LOC103496282 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 9.8e-91
Identity = 207/224 (92.41%), Postives = 209/224 (93.30%), Query Frame = 0

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAG-GGNGALGGGGFPDFGHGAAGDSLH 180
           PFSTLQQQALHGQLGM+SGGGIGFNMLQNDA NAG           FPDFGHGAA DSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAGNAGXXXXXXXXXXXFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGXXXXXXXXXXXXXXXXXXXXETLYLKSADDGN 224
           RSLAGGSKQDMG XXXXXXXXXXXXXXXXXXXETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGXXXXXXXXXXXXXXXXXXXETLYLKSADDGN 224

BLAST of Cla97C02G042620 vs. TrEMBL
Match: tr|W9RHN8|W9RHN8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_024545 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.3e-82
Identity = 175/223 (78.48%), Postives = 189/223 (84.75%), Query Frame = 0

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQP  MHAQY SS ++QPG HY+QHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPPTMHAQYPSSSMMQPGAHYMQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGALGGGGFPDFGHGAAGDSLHR 180
           PF  LQQQALHGQLGM+SGG  G +M+Q D  +A GG+G LG GGFPDFG G+AG+ LHR
Sbjct: 121 PFPALQQQALHGQLGMSSGGSSGLHMMQGDIGSA-GGSGQLGAGGFPDFGRGSAGEGLHR 180

Query: 181 SLAGGSKQDMGXXXXXXXXXXXXXXXXXXXXETLYLKSADDGN 224
            +AGGSKQD+G          XXXXX     ETLYLKSADDGN
Sbjct: 181 GMAGGSKQDIG----SSGSAEXXXXXSGDGGETLYLKSADDGN 218

BLAST of Cla97C02G042620 vs. TrEMBL
Match: tr|A0A061F2S4|A0A061F2S4_THECC (SSXT family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_026261 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 8.3e-82
Identity = 190/226 (84.07%), Postives = 209/226 (92.48%), Query Frame = 0

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120
           NLMYLAAIADSQPQP  MHAQ+ SSGI+QPGGHY+QHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPPNMHAQFPSSGIMQPGGHYMQHQQAQQMTPQSLMAARSSMLYAQQ 120

Query: 121 PFSTL-QQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGALGGGGFPDFGHGAAGDSLH 180
           PFS L QQQALH QLGM+SGG  G +MLQ++A+ A GG+GALG GGFPDFG G++G+ +H
Sbjct: 121 PFSALQQQQALHSQLGMSSGGNTGLHMLQSEASTA-GGSGALGAGGFPDFGRGSSGEGMH 180

Query: 181 --RSLAGGSKQDMGXXXXXXXXXXXXXXXXXXXXETLYLKSADDGN 224
             R++AGGSKQD+GXXXXXXXXXXXXXXXXXXXX TLYLK+ADDGN
Sbjct: 181 AGRAMAGGSKQDIGXXXXXXXXXXXXXXXXXXXXXTLYLKAADDGN 225

BLAST of Cla97C02G042620 vs. TrEMBL
Match: tr|A0A061F252|A0A061F252_THECC (SSXT family protein isoform 2 (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_026261 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.0e-80
Identity = 190/227 (83.70%), Postives = 209/227 (92.07%), Query Frame = 0

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHI-QQYLDENKSLILKIVESQNSGKLNECAENQARLQ 60
           MQQHLMQMQPMMAAYYPNNVTTDHI QQYLDENKSLILKIVESQNSGKL+ECAENQARLQ
Sbjct: 57  MQQHLMQMQPMMAAYYPNNVTTDHIQQQYLDENKSLILKIVESQNSGKLSECAENQARLQ 116

Query: 61  RNLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQ 120
           RNLMYLAAIADSQPQP  MHAQ+ SSGI+QPGGHY+QHQQAQQMTPQSLMAARSSMLY+Q
Sbjct: 117 RNLMYLAAIADSQPQPPNMHAQFPSSGIMQPGGHYMQHQQAQQMTPQSLMAARSSMLYAQ 176

Query: 121 QPFSTL-QQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGALGGGGFPDFGHGAAGDSL 180
           QPFS L QQQALH QLGM+SGG  G +MLQ++A+ A GG+GALG GGFPDFG G++G+ +
Sbjct: 177 QPFSALQQQQALHSQLGMSSGGNTGLHMLQSEASTA-GGSGALGAGGFPDFGRGSSGEGM 236

Query: 181 H--RSLAGGSKQDMGXXXXXXXXXXXXXXXXXXXXETLYLKSADDGN 224
           H  R++AGGSKQD+GXXXXXXXXXXXXXXXXXXXX TLYLK+ADDGN
Sbjct: 237 HAGRAMAGGSKQDIGXXXXXXXXXXXXXXXXXXXXXTLYLKAADDGN 282

BLAST of Cla97C02G042620 vs. Swiss-Prot
Match: sp|Q8L8A5|GIF1_ARATH (GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.6e-35
Identity = 75/85 (88.24%), Postives = 82/85 (96.47%), Query Frame = 0

Query: 1  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
          MQQHLMQMQPMMA YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1  MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61 NLMYLAAIADSQPQPSAMHAQYSSS 86
          NLMYLAAIADSQPQP ++H+QY S+
Sbjct: 61 NLMYLAAIADSQPQPPSVHSQYGSA 85

BLAST of Cla97C02G042620 vs. Swiss-Prot
Match: sp|Q93VH6|GIF3_ARATH (GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.1e-18
Identity = 66/161 (40.99%), Postives = 88/161 (54.66%), Query Frame = 0

Query: 3   QHLMQMQPMMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 62
           Q   QM PM+   +P  NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 2   QQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQK 61

Query: 63  NLMYLAAIADSQPQPSAMHAQYSSSGIIQP-------------GGHYIQHQQA---QQMT 122
           NLMYLAAIAD+QPQP A      +SG + P               +++Q  QA    Q  
Sbjct: 62  NLMYLAAIADAQPQPPAATL---TSGAMTPQAMAPNXXXXXXXXSYFMQQHQAVGMAQQI 121

Query: 123 PQSLMAARSSMLYSQ-----QPFSTLQQQALHGQLGMNSGG 141
           P  +   R  + +        P   L QQA+ G +G+   G
Sbjct: 122 PPGIFPPRGPLQFGSPHQFLDPQQQLHQQAMQGHMGIRPMG 159

BLAST of Cla97C02G042620 vs. Swiss-Prot
Match: sp|Q9MAL9|GIF2_ARATH (GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.0e-10
Identity = 65/185 (35.14%), Postives = 86/185 (46.49%), Query Frame = 0

Query: 2   QQHLMQMQPMMAAYYP-NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 61
           QQ   QM PM+ +  P NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQK 62

Query: 62  NLMYLAAI------------ADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSL 121
           NLMYLAAI                     M   +S    +QP  +++QH QA   +P  +
Sbjct: 63  NLMYLAAIXXXXXXXXXXXXXXXXXXXXQMATPHSG---MQPPSYFMQHPQA---SPAGI 122

Query: 122 MAAR-------SSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNM---LQNDATNAGGGN 164
            A R                        + G +G+   G     M   +Q   T  GG  
Sbjct: 123 FAPRXXXXXXXXXXXXXXXXXXXXXXXXMQGHMGIRPMGMTNNGMQHAMQQPETGLGGNV 181

BLAST of Cla97C02G042620 vs. Swiss-Prot
Match: sp|Q9UHA2|S18L2_HUMAN (SS18-like protein 2 OS=Homo sapiens OX=9606 GN=SS18L2 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-06
Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 0

Query: 11 MMAAYYPN------NVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMY 70
          M  A+ P+       V  + IQ+ L+EN  LI  IVE QN G+ NEC + Q  L RNL+Y
Sbjct: 1  MSVAFVPDWLRGKAEVNQETIQRLLEENDQLIRCIVEYQNKGRGNECVQYQHVLHRNLIY 60

Query: 71 LAAIADSQP 74
          LA IAD+ P
Sbjct: 61 LATIADASP 69

BLAST of Cla97C02G042620 vs. Swiss-Prot
Match: sp|Q15532|SSXT_HUMAN (Protein SSXT OS=Homo sapiens OX=9606 GN=SS18 PE=1 SV=3)

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 0

Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADS-QPQPSAM 79
          +T   IQ+ LD+N  LI  I++SQN GK +EC++ Q  L  NL+YLA IADS Q   S +
Sbjct: 16 ITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLL 75

Query: 80 HAQYSSSGIIQPGG 93
           A  + +  + PGG
Sbjct: 76 PAPPTQNMPMGPGG 89

BLAST of Cla97C02G042620 vs. TAIR10
Match: AT5G28640.1 (SSXT family protein)

HSP 1 Score: 151.0 bits (380), Expect = 8.8e-37
Identity = 75/85 (88.24%), Postives = 82/85 (96.47%), Query Frame = 0

Query: 1  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
          MQQHLMQMQPMMA YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1  MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61 NLMYLAAIADSQPQPSAMHAQYSSS 86
          NLMYLAAIADSQPQP ++H+QY S+
Sbjct: 61 NLMYLAAIADSQPQPPSVHSQYGSA 85

BLAST of Cla97C02G042620 vs. TAIR10
Match: AT4G00850.1 (GRF1-interacting factor 3)

HSP 1 Score: 92.8 bits (229), Expect = 2.8e-19
Identity = 66/161 (40.99%), Postives = 88/161 (54.66%), Query Frame = 0

Query: 3   QHLMQMQPMMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 62
           Q   QM PM+   +P  NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 2   QQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQK 61

Query: 63  NLMYLAAIADSQPQPSAMHAQYSSSGIIQP-------------GGHYIQHQQA---QQMT 122
           NLMYLAAIAD+QPQP A      +SG + P               +++Q  QA    Q  
Sbjct: 62  NLMYLAAIADAQPQPPAATL---TSGAMTPQAMAPNXXXXXXXXSYFMQQHQAVGMAQQI 121

Query: 123 PQSLMAARSSMLYSQ-----QPFSTLQQQALHGQLGMNSGG 141
           P  +   R  + +        P   L QQA+ G +G+   G
Sbjct: 122 PPGIFPPRGPLQFGSPHQFLDPQQQLHQQAMQGHMGIRPMG 159

BLAST of Cla97C02G042620 vs. TAIR10
Match: AT1G01160.2 (GRF1-interacting factor 2)

HSP 1 Score: 49.7 bits (117), Expect = 2.8e-06
Identity = 65/219 (29.68%), Postives = 86/219 (39.27%), Query Frame = 0

Query: 2   QQHLMQMQPMMAAYYP-NNVTTDHIQQ--------------------------------- 61
           QQ   QM PM+ +  P NN+TT+ IQ+                                 
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKMLGGSGNFESGFQEWTLKLDACLMLLFCTFSWL 62

Query: 62  -YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAI------------ADSQPQ 121
            YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAI                  
Sbjct: 63  DYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIXXXXXXXXXXXXXXXXXX 122

Query: 122 PSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAAR-------SSMLYSQQPFSTLQQ 164
              M   +S    +QP  +++QH QA   +P  + A R                      
Sbjct: 123 XXQMATPHSG---MQPPSYFMQHPQA---SPAGIFAPRXXXXXXXXXXXXXXXXXXXXXX 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022965913.11.4e-9694.17GRF1-interacting factor 1-like [Cucurbita maxima][more]
XP_004139249.18.7e-9192.41PREDICTED: GRF1-interacting factor 1 [Cucumis sativus] >KGN60781.1 hypothetical ... [more]
XP_008456296.11.5e-9092.41PREDICTED: GRF1-interacting factor 1 [Cucumis melo][more]
XP_022143216.13.6e-8990.67GRF1-interacting factor 1 [Momordica charantia][more]
XP_022937932.16.2e-8990.18GRF1-interacting factor 1-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
tr|A0A0A0LL92|A0A0A0LL92_CUCSA5.7e-9192.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G010170 PE=4 SV=1[more]
tr|A0A1S3C305|A0A1S3C305_CUCME9.8e-9192.41GRF1-interacting factor 1 OS=Cucumis melo OX=3656 GN=LOC103496282 PE=4 SV=1[more]
tr|W9RHN8|W9RHN8_9ROSA1.3e-8278.48Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_024545 PE=4 SV=1[more]
tr|A0A061F2S4|A0A061F2S4_THECC8.3e-8284.07SSXT family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_026261 PE=4 SV=1[more]
tr|A0A061F252|A0A061F252_THECC2.0e-8083.70SSXT family protein isoform 2 (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_02626... [more]
Match NameE-valueIdentityDescription
sp|Q8L8A5|GIF1_ARATH1.6e-3588.24GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1[more]
sp|Q93VH6|GIF3_ARATH5.1e-1840.99GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1[more]
sp|Q9MAL9|GIF2_ARATH3.0e-1035.14GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1[more]
sp|Q9UHA2|S18L2_HUMAN2.0e-0646.38SS18-like protein 2 OS=Homo sapiens OX=9606 GN=SS18L2 PE=3 SV=1[more]
sp|Q15532|SSXT_HUMAN2.6e-0644.59Protein SSXT OS=Homo sapiens OX=9606 GN=SS18 PE=1 SV=3[more]
Match NameE-valueIdentityDescription
AT5G28640.18.8e-3788.24SSXT family protein[more]
AT4G00850.12.8e-1940.99GRF1-interacting factor 3[more]
AT1G01160.22.8e-0629.68GRF1-interacting factor 2[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003713transcription coactivator activity
Vocabulary: INTERPRO
TermDefinition
IPR007726SS18_fam
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009955 adaxial/abaxial pattern specification
biological_process GO:0048366 leaf development
biological_process GO:0006397 mRNA processing
biological_process GO:0008380 RNA splicing
biological_process GO:0008033 tRNA processing
biological_process GO:0008150 biological_process
biological_process GO:1903506 regulation of nucleic acid-templated transcription
biological_process GO:0045893 positive regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003713 transcription coactivator activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G042620.1Cla97C02G042620.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007726SS18 familyPFAMPF05030SSXTcoord: 19..76
e-value: 1.2E-23
score: 82.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..223
NoneNo IPR availablePANTHERPTHR23107SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEINcoord: 1..223
NoneNo IPR availablePANTHERPTHR23107:SF6GRF1-INTERACTING FACTOR 1coord: 1..223

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G042620Watermelon (97103) v2wmbwmbB103
Cla97C02G042620Cucumber (Gy14) v2cgybwmbB122
Cla97C02G042620Wild cucumber (PI 183967)cpiwmbB131
Cla97C02G042620Cucumber (Chinese Long) v3cucwmbB132
Cla97C02G042620Cucumber (Chinese Long) v2cuwmbB129
Cla97C02G042620Bottle gourd (USVL1VR-Ls)lsiwmbB327
Cla97C02G042620Watermelon (97103) v1wmwmbB203
Cla97C02G042620Watermelon (97103) v1wmwmbB395
Cla97C02G042620Wax gourdwgowmbB128