Cp4.1LG07g09690 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG07g09690
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGRF1-INTERACTING FACTOR 1 family protein
LocationCp4.1LG07 : 8783189 .. 8788476 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTAGGAGCAGCAGCAACCCCTTAGCCCATCTGGTTGCCTCAATAAAGTTAAAATTTGCATACACATTCAAACAAACTTTGGATTTTCTCTTTCATTATCGCTCACGTGACACCTTTCCCTTGCTCTGTGAGGGAGAGAAGTGGCATCTTTGGCCACAAACAAAGCCAAAACGGCTGCCCCAAAGCTCCTTTTCTCTCTGCTCTGCTACCTCTCTCATAATGCATTTTCTGTTTGTGTAATTTGCAGAAGCTCTGCTACCTTCCTCTGTCACTATCACCGTCCAAACCCCCTCTCCCTTCCCTCTCTGTTTCAAAACCCCAAAGAAGAAGAGAAGAAAATCAGCTGTTTCTTTGAAAACCCATCATTCATTTCTCTCAAATGCAACAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATCCCAACAACGTCACTACTGATCATATTCAACAGGTTCTTCTTCTTTTTCTTCCTTTTTTTCACTTTTTTCATCTGGGTTTTCCTTGTTCTTCATGATTTTTATTCTCTTTCATGTGGGTTTTCCTTGTTTTTCATGTTTGAGATGATTCGTAAGAGGTTCTTCTTCTTCTTCTTCCAATGTTTTGATTTCTTTCATGTGGGGTTTCCTTGTTTTTTATGTTAGAGATGATTCATAATATGTTCTTCATCTTCTTCCATTTTTTATGATCTCTTTCATGTGGGTTTTCCTTGTTCTTCATGTTAGATATGATTCGTAACTTGTTTTTCATTCTTTTAATCTCTTTCATGTGGGTTTTCCTTGTTTTTCATGTTAGAAATGATTCATAACATGTTCTTCTTCATCTTCATCTTCCATTTTTTTTGATCTTTTTCATCTGGGTTTTCCTTGTTCTTCATGTTAGAGATGATTCATAACTTATTTATTCATTCTTTTAATCTCTTTCATATGGGTTTTCCTTGTTCTTCATGTTAGAGATGATTCATAAGAATGTCTTGCTTCCTTTATCCTATTGGGTTTAATTGTTGCCTTTTTCACGTGCTCTTGTCTCTATTGACTGATTTTAATATCTAATACCAAAAGGTGAGACCAGTCCATCAATGGCTTTTCTCTTGTTTATTTCCATCTCTTTTCCTGATTAAGTATTTGTTTCCATATTGGTCAAAGCTTAATTACTTTTAATCTTTCAATTCCATGATTGACTTCTGAACCCTTTTGGCCTTAATCTTAATGGGAAAAGGAATCAGAACTGGTTGGATGGTGCATTTTTTTTCCCTTTTCTTCTCTCTTTCTCTGTTCATCAAGTGGGGCAAAAAGTGGCTCATGAAACTGTTGAGAGCTTGAGCTTTTGAGGACTATAAGGTTAATTTAAGGTTTTGGATTTTATGTTCTTTCATGTTGGTCTAAACTTGTTGTAAATGAATGTACCATATAAAAGTTCTTAACTAAGATTTATGTTTTTGGTAAAAGGGTTTCTTTAGAAAGAAAATAATAGCTTTTCTTTGGACTATGAATGTGATATCAGCTTCATTAATTACTAGAAATCTTGATTCAAATTGTTTCGTGAGATCCCACATCGGTTGGGGAGGAGAACCAAACACCCTTTATAAGGGTATGAAAACCTCTCCCAAGCAAACACGTAGTAAAGTTCAAAAAGAAAAACCCAAAGAGGATAATACTTGCTAGTCGTGGGCTTGGGCCGTTACAAATGGTATCAGAGTTAGACACCGGGCGACGTGCCAACGAGGAGGCTGTTCCCCGAAAGGGGTTAGACACGAGGCGGTGTGCCAGTAAGAACACTGGCCCCAAATGGGGGTGGATTAGGGTCCCAAATCGATTGGATGAAGGAACGAGTTCTAGCGAGGACGTTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACAAAACACCCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACACGGAAGTCCTGGATTGTGAGATCCCACATCGGTTGGGAGGAGGAGGTGCGGAAACCTCTCCCTAGTAGACGCGTTTTAAAATCCTTGAGGGAAGTCAAAAGGACTGCCGATAGCGGTGGGCTTGGGCCGTTACATTATTCTTTTAGTTTATGAACTTCTTTGATGAGGTTTCTTAAGAAAATTATTCATGAATTTTGGCCGGAGTTCATATAATCTCACTGGAATTGGCCAAGATTCAAGTGATTTTTTGGTATTTTTTAACAGTTTTGTGATGAACTATAATGAGGATAATGTTAAAACAGTCTACATCAGTAGAGAAGTAAAAAGTGTTTATAATGGAAGACAGAAGAGCTTGAATAGTGATTGGTCAACCATGAAACAGTATTATAAGTTGCTGTCTGGTTCTGTTTGTGTTTCAGCTCATGTTTTTTAAGGTTTATGATGTCTTATTTGATCATCTATGTTGCAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAGAGCCAAAACTCGGGAAAATTGAATGAATGTGCAGAGTAAGTATATGGTTGAATCATTGTGATAAATGTGAATTTTCTTTTTCGGTTTGATCCATTCGGTTCCTAGGATGAAGAAACAGAGTAAGTATATGGGCCTTTCCCTTCTGGGCTTTCCCTTCTGGGCTTCCCCTCAAGGTTTTATAACGCGTCTGCTTGGAAGAGGTTTCCTCGAATGCTTCGTTTCGATGTGGGATTTCATAATCCACACTCCAGGGGCCCAATGTCCTCGTTGACATATCGCCCGGTGTCTGGCTTTGATATATTTGCAACCACTCAAGCCCACAACTAACAGATATTGTTCTCTCAATGTTTTAAAGAGCGTCTATAGGGAGAGGTTTCCACACTCTTATAAGAAATGCTTCGTTCCCCTCTCTAACCGATGTGAGATCTCACAATCCACCCCCTTGGAGGCTAGCGCCTCGCTTGCACACCACCTAGTGTCTGGCTATGCACGCCGTTCAGTACTGGCTATGCACGCCGTTCAGTACTGGCTATGATACCATTTGTTGCCCAAATCCACTGCTAGTAGATATGGTTCTCTTTGGACTTTCCCTCTAGTGCTTCCCCTCAAGATTTTAAAACACGTTTGCTAGGGAGAGGTTCCCACACGCTTATAAGAAATGCTTAGTTTCCCTTTACAACCGATGTGACATCTCACAATCCACTCCCTTTGGGGGCCCAGTATCCTTGATGGCACGCCGTCTAGTGTCTGGTTCTGATACCATTTGTAACAGCTCAAGCCCACCGCTAGCTGATATTGTCCTCGTTGAGCTTTCCCTTCTGGGCTTCTCCTCAATGTGTGTCTGCTAGGGAGAGGTTTTCACACCCTTATAAGAAATGTTTTGTTCCCTTCTCCCCGGATGTGGGATCTCACACATGGGATATGACAGTCATATATTGAAAGGTCGATCGAGAGTCAAAACCAACCCTAATATTGCTTAAACAAAGTTTTGAGGCTGAAAACGAAGGTTTTGAAGAACAAAAGTAATTCTGATATCTTTTCCTGTGCAGGAATCAAGCAAGGCTACAGAGGAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGGTATGAACATAGTTAGCCGTGTTTTGTTTGGCTGGTGATCATTTGGGGAGGTTTTGTCTAACTTTAAGTCGGTTACAAATTTAGCGGCTTGAATCTTGGACTTTAGAATGTAATATGTAATAGCCCATGCCCACAACTGGTAGATATTATCCGCTTTCGCGCGTTATGTATCTCCGTCAGCTTTACTGTTTTAGAACGTGTCTGGCTGATGGCTATATGTAACGGGCCAAAATGGACAATATCTGCTAATGGTGGGCTTAGGCTGTTCCAAATGGTGTCAGAGCTAGACATCGGACGATGTGCCAGTGATTACGTTGGCCCCCAATAAGGGTGGATTGTGAGATCCCACATCGGTTGAGGGGAACAAACGAAGCATTCTTTATGAATTTTTCCCTAGCAAACGCGTTTTAAAGCGTTGAAGGGAACCTCAAAAGGAAAAGTCCAAAGAGGATAATATCTGTTAGCTGTGGGTTTAAGCTGTTCCAAATGGTATTAGAGCCCGACACAAGGCGGTGTGTCAATAAGGATGTTGGGCCCCCAATGAGGGTGGATTGTGAGATCCCACATCGGTGGGAGAGAGAAACAAACGAAGCATTCTTAATGAATTTTTCCCTAGCAAAAGCGTTTTAAAGCCTTGAAAGGAACCTCAGAAAGAAAAGCCCAAAGAGGACAATATCTGCAAGCGGTGGGTTTGAGCTGTTCCAAATGGTATTAGAGCCAGACACAGGGTGGTGTGTCAGTGAGGACGTTGGGCCCCTAAGGAGGGTGGATTTGCGAGATCCTACATTGATTCGAGAGGGGAACGAAACATTCCTTCTAAGGGTGTGGAAACCTCTCTCTAGCATACGCATTTTAAAACCGTGAGGCTGGCGATAATACGGAATGGGCCAAAGCGGGCTTCGGTTGTTACGTATATCCAAACATGTCAAAGTAAATTGAATTGAAATGAATCCAATATGTTTTGGTTTTGCCATGTTCTCTCCAGTACTCTTCTAGTGGCCTAATCCAACCAGGAGGACATTACATTCAACACCAACAAGCTCAGCAAATGACACCACAATCACTGATGGCTGCTCGGTCCTCCATGTTGTACACCCAACAGCCATTTTCTAGCCTGCAGCAGCAAGCTTTACACAGCCAACTCGGGATGAGCTCCGGAGGCGGCATAGGATTCAACATGCTGCAAAACGATGCCGCCAATGCCGGAGGCAACGGAGGAGCCCTTGGAGGAGGAGGAGGATTCCCAGATTTCAGCCACAATGCTGCAGCTGATAGCTTGCACCGCAGCCTAGCTGGTGGGAGCAAGCAAGATATGGGAGGAAGCGGGTCGGGCGAGGGACGTGGAGGGAGCTCCGGGAGCCATGGCGGCGATGGAGGTGAGACGCTCTACTTGAAATCAGCTGATGATGGGAACTGAAAGTATGAGAATAAAGTCAATAGAAATTATGAGTAAACAATGGGGTGAGGATTCAAACCTCATAAAACTTTGATCTTTGGTGTTCTTTTTCCAAGTTAAGGTATTTGTTTGTAGTGTATTATGTAAATTTTCTTCTCTTTCTTTTGTGCTTATGAGAAGTGAACGAACGAACGAACTGATATCATATTCGAATGAGAGTGATTATGATCTCGTCGGGTATTCCTTCAATGTTTTTAAAACGCGCCTGCTAGAGAGGTTCTCACACCCTTATAAAGAATGCTCTTTCTCCTC

mRNA sequence

TGTTAGGAGCAGCAGCAACCCCTTAGCCCATCTGGTTGCCTCAATAAAGTTAAAATTTGCATACACATTCAAACAAACTTTGGATTTTCTCTTTCATTATCGCTCACGTGACACCTTTCCCTTGCTCTGTGAGGGAGAGAAGTGGCATCTTTGGCCACAAACAAAGCCAAAACGGCTGCCCCAAAGCTCCTTTTCTCTCTGCTCTGCTACCTCTCTCATAATGCATTTTCTGTTTGTGTAATTTGCAGAAGCTCTGCTACCTTCCTCTGTCACTATCACCGTCCAAACCCCCTCTCCCTTCCCTCTCTGTTTCAAAACCCCAAAGAAGAAGAGAAGAAAATCAGCTGTTTCTTTGAAAACCCATCATTCATTTCTCTCAAATGCAACAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATCCCAACAACGTCACTACTGATCATATTCAACAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAGAGCCAAAACTCGGGAAAATTGAATGAATGTGCAGAGAATCAAGCAAGGCTACAGAGGAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGTACTCTTCTAGTGGCCTAATCCAACCAGGAGGACATTACATTCAACACCAACAAGCTCAGCAAATGACACCACAATCACTGATGGCTGCTCGGTCCTCCATGTTGTACACCCAACAGCCATTTTCTAGCCTGCAGCAGCAAGCTTTACACAGCCAACTCGGGATGAGCTCCGGAGGCGGCATAGGATTCAACATGCTGCAAAACGATGCCGCCAATGCCGGAGGCAACGGAGGAGCCCTTGGAGGAGGAGGAGGATTCCCAGATTTCAGCCACAATGCTGCAGCTGATAGCTTGCACCGCAGCCTAGCTGGTGGGAGCAAGCAAGATATGGGAGGAAGCGGGTCGGGCGAGGGACGTGGAGGGAGCTCCGGGAGCCATGGCGGCGATGGAGGTGAGACGCTCTACTTGAAATCAGCTGATGATGGGAACTGAAAGTATGAGAATAAAGTCAATAGAAATTATGAGTAAACAATGGGGTGAGGATTCAAACCTCATAAAACTTTGATCTTTGGTGTTCTTTTTCCAAGTTAAGGTATTTGTTTGTAGTGTATTATGTAAATTTTCTTCTCTTTCTTTTGTGCTTATGAGAAGTGAACGAACGAACGAACTGATATCATATTCGAATGAGAGTGATTATGATCTCGTCGGGTATTCCTTCAATGTTTTTAAAACGCGCCTGCTAGAGAGGTTCTCACACCCTTATAAAGAATGCTCTTTCTCCTC

Coding sequence (CDS)

ATGCAACAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATCCCAACAACGTCACTACTGATCATATTCAACAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAGAGCCAAAACTCGGGAAAATTGAATGAATGTGCAGAGAATCAAGCAAGGCTACAGAGGAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGTACTCTTCTAGTGGCCTAATCCAACCAGGAGGACATTACATTCAACACCAACAAGCTCAGCAAATGACACCACAATCACTGATGGCTGCTCGGTCCTCCATGTTGTACACCCAACAGCCATTTTCTAGCCTGCAGCAGCAAGCTTTACACAGCCAACTCGGGATGAGCTCCGGAGGCGGCATAGGATTCAACATGCTGCAAAACGATGCCGCCAATGCCGGAGGCAACGGAGGAGCCCTTGGAGGAGGAGGAGGATTCCCAGATTTCAGCCACAATGCTGCAGCTGATAGCTTGCACCGCAGCCTAGCTGGTGGGAGCAAGCAAGATATGGGAGGAAGCGGGTCGGGCGAGGGACGTGGAGGGAGCTCCGGGAGCCATGGCGGCGATGGAGGTGAGACGCTCTACTTGAAATCAGCTGATGATGGGAACTGA

Protein sequence

MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQPFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGGFPDFSHNAAADSLHRSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGGETLYLKSADDGN
Homology
[Close]
BLAST of Cp4.1LG07g09690 vs. Swiss-Prot
Match: GIF1_ARATH (GRF1-interacting factor 1 OS=Arabidopsis thaliana GN=GIF1 PE=1 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.7e-61
Identity = 155/241 (64.32%), Postives = 172/241 (71.37%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMA YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSS--GLIQ--PGGHYIQHQQA---QQMTPQSLMAARS 120
           NLMYLAAIADSQPQP ++H+QY S+  G+IQ   G HY+Q QQA   QQMT QSLMAARS
Sbjct: 61  NLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARS 120

Query: 121 SMLYT-----QQPFSSLQQQAL-HSQLGMSS----GGGIGFNMLQNDAANAGGNGGALGG 180
           SMLY      QQP+++LQ Q L HSQLGMSS    GG  G ++LQ +A            
Sbjct: 121 SMLYAQQQQQQQPYATLQHQQLHHSQLGMSSSSGGGGSSGLHILQGEA------------ 180

Query: 181 GGGFPDFSHNAAADSLHRSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGGETLYLKSADDG 225
            GGF DF              G  K +MG  G GEGRGGSS    GDGGETLYLKS+DDG
Sbjct: 181 -GGFHDF--------------GRGKPEMGSGGGGEGRGGSS----GDGGETLYLKSSDDG 210

[Close]
BLAST of Cp4.1LG07g09690 vs. Swiss-Prot
Match: GIF2_ARATH (GRF1-interacting factor 2 OS=Arabidopsis thaliana GN=GIF2 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.0e-19
Identity = 80/183 (43.72%), Postives = 105/183 (57.38%), Query Frame = 1 

Query: 2   QQHLMQMQPMMAAYYP-NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 61
           QQ   QM PM+ +  P NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQK 62

Query: 62  NLMYLAAIADSQPQP--------SAMHAQYSS--SGLIQPGGHYIQHQQAQQMTPQSLMA 121
           NLMYLAAIAD+QP P        +A+ AQ ++  SG+ QP  +++QH QA   +P  + A
Sbjct: 63  NLMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGM-QPPSYFMQHPQA---SPAGIFA 122

Query: 122 AR-----SSMLYTQQPFSSLQ--QQALHSQLGMSSGGGIGFNM---LQNDAANAGGNGGA 164
            R      S L  Q P    Q  QQA+   +G+   G     M   +Q      GGN G 
Sbjct: 123 PRGPLQFGSPLQFQDPQQQQQIHQQAMQGHMGIRPMGMTNNGMQHAMQQPETGLGGNVGL 181

[Close]
BLAST of Cp4.1LG07g09690 vs. Swiss-Prot
Match: GIF3_ARATH (GRF1-interacting factor 3 OS=Arabidopsis thaliana GN=GIF3 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.8e-15
Identity = 87/242 (35.95%), Postives = 117/242 (48.35%), Query Frame = 1 

Query: 3   QHLMQMQPMMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 62
           Q   QM PM+   +P  NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 2   QQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQK 61

Query: 63  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 122
           NLMYLAAIAD+QPQP A      +SG + P      +  + Q  P   M    ++   QQ
Sbjct: 62  NLMYLAAIADAQPQPPAATL---TSGAMTPQA-MAPNPSSMQPPPSYFMQQHQAVGMAQQ 121

Query: 123 -------PFSSLQ----------QQALHSQ----------LGMSSGGGIGFNMLQNDAAN 182
                  P   LQ          QQ LH Q          +G+++  G+   M  ++ A 
Sbjct: 122 IPPGIFPPRGPLQFGSPHQFLDPQQQLHQQAMQGHMGIRPMGLNNNNGLQHQMHHHETAL 181

Query: 183 AGGNGGAL-GGGGGFPDFSHNAAADSLHRSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGG 215
           A  N G     GGG PD                G+     G+   +G+GGS+  HGG   
Sbjct: 182 AANNAGPNDASGGGKPD----------------GTNMSQSGA---DGQGGSAARHGGGDA 220

[Close]
BLAST of Cp4.1LG07g09690 vs. Swiss-Prot
Match: S18L2_HUMAN (SS18-like protein 2 OS=Homo sapiens GN=SS18L2 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-06
Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 1 

Query: 11 MMAAYYPN------NVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMY 70
          M  A+ P+       V  + IQ+ L+EN  LI  IVE QN G+ NEC + Q  L RNL+Y
Sbjct: 1  MSVAFVPDWLRGKAEVNQETIQRLLEENDQLIRCIVEYQNKGRGNECVQYQHVLHRNLIY 60

Query: 71 LAAIADSQP 74
          LA IAD+ P
Sbjct: 61 LATIADASP 69

[Close]
BLAST of Cp4.1LG07g09690 vs. Swiss-Prot
Match: S18L2_MOUSE (SS18-like protein 2 OS=Mus musculus GN=Ss18l2 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.8e-06
Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 1 

Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADS 72
          V  + IQ+ L+EN  LI  IVE QN G+ NEC + Q  L RNL+YLA IAD+
Sbjct: 16 VNQETIQRLLEENDQLIRCIVEYQNKGRANECVQYQHVLHRNLIYLATIADA 67

[Close]
BLAST of Cp4.1LG07g09690 vs. TrEMBL
Match: A0A0A0LL92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010170 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.7e-105
Identity = 213/225 (94.67%), Postives = 218/225 (96.89%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANA-GGNGGALGGGGGFPDFSHNAAADSL 180
           PFS+LQQQALH QLGMSSGGGIGFNMLQNDAANA GGNGGAL GGGGFPDF H AA+DSL
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGAL-GGGGFPDFGHGAASDSL 180

Query: 181 HRSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGGETLYLKSADDGN 225
           HRSLAGGSKQDMGG+GS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 HRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]
BLAST of Cp4.1LG07g09690 vs. TrEMBL
Match: A0A061F2S4_THECC (SSXT family protein isoform 1 OS=Theobroma cacao GN=TCM_026261 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 9.4e-88
Identity = 183/227 (80.62%), Postives = 202/227 (88.99%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP  MHAQ+ SSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ
Sbjct: 61  NLMYLAAIADSQPQPPNMHAQFPSSGIMQPGGHYMQHQQAQQMTPQSLMAARSSMLYAQQ 120

Query: 121 PFSSL-QQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGGFPDFSHNAAADSL 180
           PFS+L QQQALHSQLGMSSGG  G +MLQ++A+ AGG+G    G GGFPDF   ++ + +
Sbjct: 121 PFSALQQQQALHSQLGMSSGGNTGLHMLQSEASTAGGSGAL--GAGGFPDFGRGSSGEGM 180

Query: 181 H--RSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGGETLYLKSADDGN 225
           H  R++AGGSKQD+G SGS EGRGGSSG  GGDGGETLYLK+ADDGN
Sbjct: 181 HAGRAMAGGSKQDIGSSGSAEGRGGSSGGQGGDGGETLYLKAADDGN 225

[Close]
BLAST of Cp4.1LG07g09690 vs. TrEMBL
Match: W9RHN8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024545 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 4.7e-87
Identity = 181/224 (80.80%), Postives = 194/224 (86.61%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP  MHAQY SS ++QPG HY+QHQQAQQMTPQSLMAARSSMLYTQQ
Sbjct: 61  NLMYLAAIADSQPQPPTMHAQYPSSSMMQPGAHYMQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGGFPDFSHNAAADSLH 180
           PF +LQQQALH QLGMSSGG  G +M+Q D  +AGG+G    G GGFPDF   +A + LH
Sbjct: 121 PFPALQQQALHGQLGMSSGGSSGLHMMQGDIGSAGGSGQL--GAGGFPDFGRGSAGEGLH 180

Query: 181 RSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGGETLYLKSADDGN 225
           R +AGGSKQD+G SGS EGRGGSS    GDGGETLYLKSADDGN
Sbjct: 181 RGMAGGSKQDIGSSGSAEGRGGSS----GDGGETLYLKSADDGN 218

[Close]
BLAST of Cp4.1LG07g09690 vs. TrEMBL
Match: A0A061F252_THECC (SSXT family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_026261 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.3e-86
Identity = 183/228 (80.26%), Postives = 202/228 (88.60%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQ-QYLDENKSLILKIVESQNSGKLNECAENQARLQ 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQ QYLDENKSLILKIVESQNSGKL+ECAENQARLQ
Sbjct: 57  MQQHLMQMQPMMAAYYPNNVTTDHIQQQYLDENKSLILKIVESQNSGKLSECAENQARLQ 116

Query: 61  RNLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQ 120
           RNLMYLAAIADSQPQP  MHAQ+ SSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY Q
Sbjct: 117 RNLMYLAAIADSQPQPPNMHAQFPSSGIMQPGGHYMQHQQAQQMTPQSLMAARSSMLYAQ 176

Query: 121 QPFSSL-QQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGGFPDFSHNAAADS 180
           QPFS+L QQQALHSQLGMSSGG  G +MLQ++A+ AGG+G    G GGFPDF   ++ + 
Sbjct: 177 QPFSALQQQQALHSQLGMSSGGNTGLHMLQSEASTAGGSGAL--GAGGFPDFGRGSSGEG 236

Query: 181 LH--RSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGGETLYLKSADDGN 225
           +H  R++AGGSKQD+G SGS EGRGGSSG  GGDGGETLYLK+ADDGN
Sbjct: 237 MHAGRAMAGGSKQDIGSSGSAEGRGGSSGGQGGDGGETLYLKAADDGN 282

[Close]
BLAST of Cp4.1LG07g09690 vs. TrEMBL
Match: B9S7I1_RICCO (Synovial sarcoma associated ss18 protein, putative OS=Ricinus communis GN=RCOM_0608010 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 6.3e-84
Identity = 177/225 (78.67%), Postives = 199/225 (88.44%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGK++ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKISECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP  MH+Q+SSSG++QPG HY+QHQQAQQMTPQS+MAARSSMLYTQQ
Sbjct: 61  NLMYLAAIADSQPQPPNMHSQFSSSGIMQPGAHYMQHQQAQQMTPQSVMAARSSMLYTQQ 120

Query: 121 PFSSL-QQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGGFPDFSHNAAADSL 180
            +++L QQQALHSQLGMSSGG  G +MLQ++A+ AGG+GG   G GGFPDF  +A+    
Sbjct: 121 QYAALQQQQALHSQLGMSSGGSPGLHMLQSEASTAGGSGGL--GAGGFPDFGRDASG--- 180

Query: 181 HRSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGGETLYLKSADDGN 225
            R +AGGSKQDMG +GSGEGRGG+SG  G DGGE LYLKSAD+GN
Sbjct: 181 -RGMAGGSKQDMGNAGSGEGRGGNSGGQGSDGGENLYLKSADEGN 219

[Close]
BLAST of Cp4.1LG07g09690 vs. TAIR10
Match: AT5G28640.1 (AT5G28640.1 SSXT family protein)

HSP 1 Score: 236.1 bits (601), Expect = 2.1e-62
Identity = 155/241 (64.32%), Postives = 172/241 (71.37%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMA YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSS--GLIQ--PGGHYIQHQQA---QQMTPQSLMAARS 120
           NLMYLAAIADSQPQP ++H+QY S+  G+IQ   G HY+Q QQA   QQMT QSLMAARS
Sbjct: 61  NLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARS 120

Query: 121 SMLYT-----QQPFSSLQQQAL-HSQLGMSS----GGGIGFNMLQNDAANAGGNGGALGG 180
           SMLY      QQP+++LQ Q L HSQLGMSS    GG  G ++LQ +A            
Sbjct: 121 SMLYAQQQQQQQPYATLQHQQLHHSQLGMSSSSGGGGSSGLHILQGEA------------ 180

Query: 181 GGGFPDFSHNAAADSLHRSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGGETLYLKSADDG 225
            GGF DF              G  K +MG  G GEGRGGSS    GDGGETLYLKS+DDG
Sbjct: 181 -GGFHDF--------------GRGKPEMGSGGGGEGRGGSS----GDGGETLYLKSSDDG 210

[Close]
BLAST of Cp4.1LG07g09690 vs. TAIR10
Match: AT4G00850.1 (AT4G00850.1 GRF1-interacting factor 3)

HSP 1 Score: 84.3 bits (207), Expect = 1.0e-16
Identity = 87/242 (35.95%), Postives = 117/242 (48.35%), Query Frame = 1 

Query: 3   QHLMQMQPMMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 62
           Q   QM PM+   +P  NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 2   QQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQK 61

Query: 63  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 122
           NLMYLAAIAD+QPQP A      +SG + P      +  + Q  P   M    ++   QQ
Sbjct: 62  NLMYLAAIADAQPQPPAATL---TSGAMTPQA-MAPNPSSMQPPPSYFMQQHQAVGMAQQ 121

Query: 123 -------PFSSLQ----------QQALHSQ----------LGMSSGGGIGFNMLQNDAAN 182
                  P   LQ          QQ LH Q          +G+++  G+   M  ++ A 
Sbjct: 122 IPPGIFPPRGPLQFGSPHQFLDPQQQLHQQAMQGHMGIRPMGLNNNNGLQHQMHHHETAL 181

Query: 183 AGGNGGAL-GGGGGFPDFSHNAAADSLHRSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGG 215
           A  N G     GGG PD                G+     G+   +G+GGS+  HGG   
Sbjct: 182 AANNAGPNDASGGGKPD----------------GTNMSQSGA---DGQGGSAARHGGGDA 220

[Close]
BLAST of Cp4.1LG07g09690 vs. TAIR10
Match: AT1G01160.2 (AT1G01160.2 GRF1-interacting factor 2)

HSP 1 Score: 78.6 bits (192), Expect = 5.6e-15
Identity = 80/217 (36.87%), Postives = 105/217 (48.39%), Query Frame = 1 

Query: 2   QQHLMQMQPMMAAYYP-NNVTTDHIQQ--------------------------------- 61
           QQ   QM PM+ +  P NN+TT+ IQ+                                 
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKMLGGSGNFESGFQEWTLKLDACLMLLFCTFSWL 62

Query: 62  -YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP--------SAM 121
            YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QP P        +A+
Sbjct: 63  DYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAV 122

Query: 122 HAQYSS--SGLIQPGGHYIQHQQAQQMTPQSLMAAR-----SSMLYTQQPFSSLQ--QQA 164
            AQ ++  SG+ QP  +++QH QA   +P  + A R      S L  Q P    Q  QQA
Sbjct: 123 AAQMATPHSGM-QPPSYFMQHPQA---SPAGIFAPRGPLQFGSPLQFQDPQQQQQIHQQA 182

[Close]
BLAST of Cp4.1LG07g09690 vs. NCBI nr
Match: gi|449442961|ref|XP_004139249.1| (PREDICTED: GRF1-interacting factor 1 [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 2.4e-105
Identity = 213/225 (94.67%), Postives = 218/225 (96.89%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANA-GGNGGALGGGGGFPDFSHNAAADSL 180
           PFS+LQQQALH QLGMSSGGGIGFNMLQNDAANA GGNGGAL GGGGFPDF H AA+DSL
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGAL-GGGGFPDFGHGAASDSL 180

Query: 181 HRSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGGETLYLKSADDGN 225
           HRSLAGGSKQDMGG+GS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 HRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]
BLAST of Cp4.1LG07g09690 vs. NCBI nr
Match: gi|659070713|ref|XP_008456296.1| (PREDICTED: GRF1-interacting factor 1 [Cucumis melo])

HSP 1 Score: 388.7 bits (997), Expect = 7.1e-105
Identity = 212/225 (94.22%), Postives = 217/225 (96.44%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANA-GGNGGALGGGGGFPDFSHNAAADSL 180
           PFS+LQQQALH QLGMSSGGGIGFNMLQNDA NA GGNGGAL GGGGFPDF H AA+DSL
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAGNAGGGNGGAL-GGGGFPDFGHGAASDSL 180

Query: 181 HRSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGGETLYLKSADDGN 225
           HRSLAGGSKQDMGG+GS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 HRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]
BLAST of Cp4.1LG07g09690 vs. NCBI nr
Match: gi|1009117529|ref|XP_015875366.1| (PREDICTED: GRF1-interacting factor 1 [Ziziphus jujuba])

HSP 1 Score: 339.0 bits (868), Expect = 6.5e-90
Identity = 186/225 (82.67%), Postives = 199/225 (88.44%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYI-QHQQAQQMTPQSLMAARSSMLYTQ 120
           NLMYLAAIADSQPQP  +HAQY SSG++QPG HY+ QHQQAQQMTPQSLMAARSSMLY+Q
Sbjct: 61  NLMYLAAIADSQPQPPTIHAQYPSSGIMQPGAHYMQQHQQAQQMTPQSLMAARSSMLYSQ 120

Query: 121 QPFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGGFPDFSHNAAADSL 180
           Q FS+LQQQALH QLGMSSGG  G +MLQ+D  NAGGNG    G GGFPDF   +A + L
Sbjct: 121 QSFSTLQQQALHGQLGMSSGGSAGLHMLQSDTGNAGGNGPL--GTGGFPDFGRGSAGEGL 180

Query: 181 HRSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGGETLYLKSADDGN 225
           HR +AGGSKQDMG +GS EGRGGSSG HGGDGGETLYLKSADDGN
Sbjct: 181 HRGMAGGSKQDMGSAGSAEGRGGSSGGHGGDGGETLYLKSADDGN 223

[Close]
BLAST of Cp4.1LG07g09690 vs. NCBI nr
Match: gi|590642355|ref|XP_007030495.1| (SSXT family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 331.3 bits (848), Expect = 1.3e-87
Identity = 183/227 (80.62%), Postives = 202/227 (88.99%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP  MHAQ+ SSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ
Sbjct: 61  NLMYLAAIADSQPQPPNMHAQFPSSGIMQPGGHYMQHQQAQQMTPQSLMAARSSMLYAQQ 120

Query: 121 PFSSL-QQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGGFPDFSHNAAADSL 180
           PFS+L QQQALHSQLGMSSGG  G +MLQ++A+ AGG+G    G GGFPDF   ++ + +
Sbjct: 121 PFSALQQQQALHSQLGMSSGGNTGLHMLQSEASTAGGSGAL--GAGGFPDFGRGSSGEGM 180

Query: 181 H--RSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGGETLYLKSADDGN 225
           H  R++AGGSKQD+G SGS EGRGGSSG  GGDGGETLYLK+ADDGN
Sbjct: 181 HAGRAMAGGSKQDIGSSGSAEGRGGSSGGQGGDGGETLYLKAADDGN 225

[Close]
BLAST of Cp4.1LG07g09690 vs. NCBI nr
Match: gi|703121167|ref|XP_010102263.1| (hypothetical protein L484_024545 [Morus notabilis])

HSP 1 Score: 328.9 bits (842), Expect = 6.7e-87
Identity = 181/224 (80.80%), Postives = 194/224 (86.61%), Query Frame = 1 

Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQP  MHAQY SS ++QPG HY+QHQQAQQMTPQSLMAARSSMLYTQQ
Sbjct: 61  NLMYLAAIADSQPQPPTMHAQYPSSSMMQPGAHYMQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGGFPDFSHNAAADSLH 180
           PF +LQQQALH QLGMSSGG  G +M+Q D  +AGG+G    G GGFPDF   +A + LH
Sbjct: 121 PFPALQQQALHGQLGMSSGGSSGLHMMQGDIGSAGGSGQL--GAGGFPDFGRGSAGEGLH 180

Query: 181 RSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGGETLYLKSADDGN 225
           R +AGGSKQD+G SGS EGRGGSS    GDGGETLYLKSADDGN
Sbjct: 181 RGMAGGSKQDIGSSGSAEGRGGSS----GDGGETLYLKSADDGN 218

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g09690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GIF1_ARATH3.7e-6164.32GRF1-interacting factor 1 OS=Arabidopsis thaliana GN=GIF1 PE=1 SV=1[more]
GIF2_ARATH6.0e-1943.72GRF1-interacting factor 2 OS=Arabidopsis thaliana GN=GIF2 PE=1 SV=1[more]
GIF3_ARATH1.8e-1535.95GRF1-interacting factor 3 OS=Arabidopsis thaliana GN=GIF3 PE=1 SV=1[more]
S18L2_HUMAN2.0e-0646.38SS18-like protein 2 OS=Homo sapiens GN=SS18L2 PE=3 SV=1[more]
S18L2_MOUSE5.8e-0653.85SS18-like protein 2 OS=Mus musculus GN=Ss18l2 PE=3 SV=1[more]
BLAST of Cp4.1LG07g09690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LL92_CUCSA1.7e-10594.67Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010170 PE=4 SV=1[more]
A0A061F2S4_THECC9.4e-8880.62SSXT family protein isoform 1 OS=Theobroma cacao GN=TCM_026261 PE=4 SV=1[more]
W9RHN8_9ROSA4.7e-8780.80Uncharacterized protein OS=Morus notabilis GN=L484_024545 PE=4 SV=1[more]
A0A061F252_THECC2.3e-8680.26SSXT family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_026261 PE=4 S... [more]
B9S7I1_RICCO6.3e-8478.67Synovial sarcoma associated ss18 protein, putative OS=Ricinus communis GN=RCOM_0... [more]
BLAST of Cp4.1LG07g09690 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G28640.12.1e-6264.32 SSXT family protein[more]
AT4G00850.11.0e-1635.95 GRF1-interacting factor 3[more]
AT1G01160.25.6e-1536.87 GRF1-interacting factor 2[more]
BLAST of Cp4.1LG07g09690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449442961|ref|XP_004139249.1|2.4e-10594.67PREDICTED: GRF1-interacting factor 1 [Cucumis sativus][more]
gi|659070713|ref|XP_008456296.1|7.1e-10594.22PREDICTED: GRF1-interacting factor 1 [Cucumis melo][more]
gi|1009117529|ref|XP_015875366.1|6.5e-9082.67PREDICTED: GRF1-interacting factor 1 [Ziziphus jujuba][more]
gi|590642355|ref|XP_007030495.1|1.3e-8780.62SSXT family protein isoform 1 [Theobroma cacao][more]
gi|703121167|ref|XP_010102263.1|6.7e-8780.80hypothetical protein L484_024545 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007726SS18_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009955 adaxial/abaxial pattern specification
biological_process GO:0048366 leaf development
biological_process GO:0006397 mRNA processing
biological_process GO:0008380 RNA splicing
biological_process GO:0008033 tRNA processing
biological_process GO:1903506 regulation of nucleic acid-templated transcription
biological_process GO:0045893 positive regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0003723 RNA binding
molecular_function GO:0003713 transcription coactivator activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g09690.1Cp4.1LG07g09690.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007726SS18 familyPANTHERPTHR23107SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEINcoord: 1..224
score: 2.8E
IPR007726SS18 familyPFAMPF05030SSXTcoord: 19..76
score: 1.5
NoneNo IPR availablePANTHERPTHR23107:SF6GRF1-INTERACTING FACTOR 1coord: 1..224
score: 2.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG07g09690Cucsa.133040Cucumber (Gy14) v1cgycpeB0356
Cp4.1LG07g09690CmaCh12G011390Cucurbita maxima (Rimu)cmacpeB203
Cp4.1LG07g09690CmaCh05G012230Cucurbita maxima (Rimu)cmacpeB789
Cp4.1LG07g09690CmoCh05G012510Cucurbita moschata (Rifu)cmocpeB742
Cp4.1LG07g09690CmoCh12G011580Cucurbita moschata (Rifu)cmocpeB175
Cp4.1LG07g09690Cla013633Watermelon (97103) v1cpewmB806
Cp4.1LG07g09690Csa2G010170Cucumber (Chinese Long) v2cpecuB820
Cp4.1LG07g09690MELO3C004407Melon (DHL92) v3.5.1cpemeB771
Cp4.1LG07g09690ClCG02G016890Watermelon (Charleston Gray)cpewcgB733
Cp4.1LG07g09690CSPI02G02710Wild cucumber (PI 183967)cpecpiB821
Cp4.1LG07g09690Lsi11G004190Bottle gourd (USVL1VR-Ls)cpelsiB659
Cp4.1LG07g09690MELO3C004407.2Melon (DHL92) v3.6.1cpemedB907
Cp4.1LG07g09690CsaV3_2G003880Cucumber (Chinese Long) v3cpecucB1014
Cp4.1LG07g09690CsGy2G002810Cucumber (Gy14) v2cgybcpeB271
Cp4.1LG07g09690Carg17432Silver-seed gourdcarcpeB0361
Cp4.1LG07g09690Carg22999Silver-seed gourdcarcpeB1496
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG07g09690Cp4.1LG11g10100Cucurbita pepo (Zucchini)cpecpeB139
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG07g09690Cucumber (Chinese Long) v3cpecucB1015
Cp4.1LG07g09690Wax gourdcpewgoB1006
Cp4.1LG07g09690Wax gourdcpewgoB1023
Cp4.1LG07g09690Wax gourdcpewgoB1068
Cp4.1LG07g09690Cucurbita pepo (Zucchini)cpecpeB140
Cp4.1LG07g09690Cucurbita pepo (Zucchini)cpecpeB373
Cp4.1LG07g09690Cucurbita pepo (Zucchini)cpecpeB504
Cp4.1LG07g09690Cucurbita maxima (Rimu)cmacpeB164
Cp4.1LG07g09690Cucurbita moschata (Rifu)cmocpeB745
Cp4.1LG07g09690Wild cucumber (PI 183967)cpecpiB822
Cp4.1LG07g09690Bottle gourd (USVL1VR-Ls)cpelsiB660
Cp4.1LG07g09690Watermelon (Charleston Gray)cpewcgB724
Cp4.1LG07g09690Melon (DHL92) v3.5.1cpemeB772
Cp4.1LG07g09690Melon (DHL92) v3.6.1cpemedB908
Cp4.1LG07g09690Silver-seed gourdcarcpeB0055
Cp4.1LG07g09690Silver-seed gourdcarcpeB0190
Cp4.1LG07g09690Silver-seed gourdcarcpeB0817