CmaCh10G000610 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh10G000610
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Zinc finger family protein
Location	Cma_Chr10 : 227129 .. 227641 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATGAAGATCAGAAGGAGTTGCAGCTCCTTCCGACGCCTCACACCATAGTGTCGTCGTCGTCGTCGTCGTCGCACATGTCGTCCCGCCCATCCGCGTCGTCGATGAGGTTCCGGTCGGATCCGTATGAACCGGGTCCAGGATCGCTGGACCTGCAGCTATCGATAAGCGTAAGGCCAATCCGGCCTACGGCGGAGTGCGTGTTCAAGTACGAGAAGGTGATGAAGCCGGAGGCGGCGAGCTGCGTGGAGGCGCTGAAGTGGCAGGCGGCGGAGCAAATAAGGCTGGCGGCGATGGAAAAGGCGTACGCGGAGAGAGTGAGAGAACTGACGAAGAGGGAGATAGAATTGGCGCAGACGGAATTCGGAAGGGCTCGACAGATGTGGGAGAGGGCGCGAGAAGAAGTGGAAAAGGCGGAGCGAATGAAAGAGAGAGCCACTCGGCAAATGGACTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCAGAGGTTTCGGCGTTCTTAA

mRNA sequence

ATGGAAGATGAAGATCAGAAGGAGTTGCAGCTCCTTCCGACGCCTCACACCATAGTGTCGTCGTCGTCGTCGTCGTCGCACATGTCGTCCCGCCCATCCGCGTCGTCGATGAGGTTCCGGTCGGATCCGTATGAACCGGGTCCAGGATCGCTGGACCTGCAGCTATCGATAAGCGTAAGGCCAATCCGGCCTACGGCGGAGTGCGTGTTCAAGTACGAGAAGGTGATGAAGCCGGAGGCGGCGAGCTGCGTGGAGGCGCTGAAGTGGCAGGCGGCGGAGCAAATAAGGCTGGCGGCGATGGAAAAGGCGTACGCGGAGAGAGTGAGAGAACTGACGAAGAGGGAGATAGAATTGGCGCAGACGGAATTCGGAAGGGCTCGACAGATGTGGGAGAGGGCGCGAGAAGAAGTGGAAAAGGCGGAGCGAATGAAAGAGAGAGCCACTCGGCAAATGGACTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCAGAGGTTTCGGCGTTCTTAA

Coding sequence (CDS)

ATGGAAGATGAAGATCAGAAGGAGTTGCAGCTCCTTCCGACGCCTCACACCATAGTGTCGTCGTCGTCGTCGTCGTCGCACATGTCGTCCCGCCCATCCGCGTCGTCGATGAGGTTCCGGTCGGATCCGTATGAACCGGGTCCAGGATCGCTGGACCTGCAGCTATCGATAAGCGTAAGGCCAATCCGGCCTACGGCGGAGTGCGTGTTCAAGTACGAGAAGGTGATGAAGCCGGAGGCGGCGAGCTGCGTGGAGGCGCTGAAGTGGCAGGCGGCGGAGCAAATAAGGCTGGCGGCGATGGAAAAGGCGTACGCGGAGAGAGTGAGAGAACTGACGAAGAGGGAGATAGAATTGGCGCAGACGGAATTCGGAAGGGCTCGACAGATGTGGGAGAGGGCGCGAGAAGAAGTGGAAAAGGCGGAGCGAATGAAAGAGAGAGCCACTCGGCAAATGGACTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCAGAGGTTTCGGCGTTCTTAA

Protein sequence

MEDEDQKELQLLPTPHTIVSSSSSSSHMSSRPSASSMRFRSDPYEPGPGSLDLQLSISVRPIRPTAECVFKYEKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRRS

Homology

[Close]

BLAST of CmaCh10G000610 vs. Swiss-Prot
Match: IDD15_ARATH (Protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana GN=SGR5 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.8e-08
Identity = 32/79 (40.51%), Postives = 60/79 (75.95%), Query Frame = 1


Query: 91  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFGRARQMWERAREEVEKAERMKERATR 150
           A+EQI ++A  EKAYAE  +   KR+ E+A+ EF  A+++ ++A+ E+E+A+ +KE++ +
Sbjct: 335 ASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMK 394

Query: 151 QMDSTCMEITCQSCRQRFR 169
           ++ ST M++TCQ+C+ +F+
Sbjct: 395 KISSTIMQVTCQTCKGQFQ 413

[Close]

BLAST of CmaCh10G000610 vs. Swiss-Prot
Match: IDD16_ARATH (Protein indeterminate-domain 16 OS=Arabidopsis thaliana GN=IDD16 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-06
Identity = 49/143 (34.27%), Postives = 75/143 (52.45%), Query Frame = 1


Query: 26  SHMSSRPSASSMRFRSDPYEPGPGSLDLQLSISVRPIRPTAECVFKYEKVMKPEAASCVE 85
           S+  S   A      S P+E    SL+LQLSI +      A    K E  +  E A+  E
Sbjct: 214 SNQHSPAFAYPFNASSAPFE----SLELQLSIGMARTSAQARHNEKRETSLTKERAN-EE 273

Query: 86  ALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFGRARQMWERAREEVEKAERMKE 145
           A K                AE  R+  KR+IE+A+ +F +A+++ E A+ E+EKA  ++E
Sbjct: 274 ARK----------------AEETRQEAKRQIEMAEKDFEKAKRIREEAKTELEKAHVVRE 333

Query: 146 RATRQMDSTCMEITCQSCRQRFR 169
            A +++++T MEITC SC+Q F+
Sbjct: 334 EAIKRINATMMEITCHSCKQLFQ 335

[Close]

BLAST of CmaCh10G000610 vs. Swiss-Prot
Match: IDD14_ARATH (Protein indeterminate-domain 14 OS=Arabidopsis thaliana GN=IDD14 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.4e-06
Identity = 27/63 (42.86%), Postives = 44/63 (69.84%), Query Frame = 1


Query: 106 ERVRELTKREIELAQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 165
           E  R  TKR+IE+A+ EF  A+++ + AR E+ KA   +E A+R++ +T M+ITC +C+Q
Sbjct: 315 EEARRETKRQIEIAELEFAEAKRIRQHARAELHKAHLFREEASRRISATMMQITCHNCKQ 374

Query: 166 RFR 169
            F+
Sbjct: 375 HFQ 377

[Close]

BLAST of CmaCh10G000610 vs. TrEMBL
Match: A0A0A0LRS8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G001530 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 6.9e-67
Identity = 151/177 (85.31%), Postives = 163/177 (92.09%), Query Frame = 1


Query: 1   MEDEDQKELQLLPTPHTIVSSSSSSSHMSSRPS-ASSMRFRSDP-YEPGPG-SLDLQLSI 60
           MEDEDQKELQLLPTPH+I  +SSS+SH+SSRPS +SS+RFRSDP +E G G S+DLQLSI
Sbjct: 1   MEDEDQKELQLLPTPHSI--ASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSI 60

Query: 61  SVRPIRPT----AECVFKYEKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTK 120
           S+RPIRP     AEC+FKYE+VMKPEAASCV+ALKWQAAEQIRLAAMEKAYAERVRELTK
Sbjct: 61  SLRPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTK 120

Query: 121 REIELAQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRRS 171
           REIELAQTEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR S
Sbjct: 121 REIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 175

[Close]

BLAST of CmaCh10G000610 vs. TrEMBL
Match: M5WPY3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021164mg PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.5e-50
Identity = 125/182 (68.68%), Postives = 139/182 (76.37%), Query Frame = 1


Query: 1   MEDEDQKELQLLPTPHTIVSSSSSSSHMSSRPSASSMRFR-------SDPYEPGPGSLDL 60
           ME +DQKELQLLP+PH +   +SSSS  +SRPS SS+R+         D    GP SLDL
Sbjct: 1   MEGDDQKELQLLPSPHLM---TSSSSQRTSRPSDSSIRYHRSSKAAVQDALLEGPNSLDL 60

Query: 61  QLSISVRPIRPTAE---CVFKYE----KVMKPEAASCVEALKWQAAEQIRLAAMEKAYAE 120
           QLSISVRPIR  +    CV         V+KP+ A CVEALKWQAAEQIRLAAMEKAYAE
Sbjct: 61  QLSISVRPIRAASSSDHCVVSKPVCDFDVLKPKTAGCVEALKWQAAEQIRLAAMEKAYAE 120

Query: 121 RVRELTKREIELAQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQR 169
           RVRELT+RE+ELAQ+EF RAR MWERAREEVEKAERMKE+A  QMDSTCMEITCQSCRQR
Sbjct: 121 RVRELTRREMELAQSEFTRARHMWERAREEVEKAERMKEKAMLQMDSTCMEITCQSCRQR 179

[Close]

BLAST of CmaCh10G000610 vs. TrEMBL
Match: A5BWN7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g01360 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.7e-50
Identity = 124/176 (70.45%), Postives = 143/176 (81.25%), Query Frame = 1


Query: 1   MEDEDQKELQLLPTPHTIVSSSSSSSHMSSRPSASSMRFRS---DPYEPGPGSLDLQLSI 60
           ME++DQKELQLLP+PH    S +SSS MS RPS SS+R+R    DP+E GPG LDLQLSI
Sbjct: 1   MEEDDQKELQLLPSPH----SMASSSRMSGRPSDSSLRYRGIGGDPFE-GPG-LDLQLSI 60

Query: 61  SVRPIRPTAECVF-----KYEKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELT 120
           S+RPIRP  E V      +Y  V   + ASCV+ALKWQAAEQIRLAAMEKAYAERVRELT
Sbjct: 61  SLRPIRPPPEYVLAGQICEYGDVK--QEASCVDALKWQAAEQIRLAAMEKAYAERVRELT 120

Query: 121 KREIELAQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR 169
           +RE+ELAQ+EF RAR MWERA EEVEKAE+MKE+A R++DSTCMEITCQ+CRQRFR
Sbjct: 121 RREMELAQSEFARARHMWERAHEEVEKAEKMKEKAMRRIDSTCMEITCQACRQRFR 168

[Close]

BLAST of CmaCh10G000610 vs. TrEMBL
Match: A0A061FYZ0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014645 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.6e-47
Identity = 123/175 (70.29%), Postives = 140/175 (80.00%), Query Frame = 1


Query: 1   MEDEDQKELQLLPTPHTIVSSSSSSSHMSSRPSASSMRFRS----DPYEPGPGSLDLQLS 60
           ME+EDQKELQLLPT  +I    +SSS MSSR S SS+R+RS    D YE GP SLDLQLS
Sbjct: 1   MEEEDQKELQLLPTSLSI----ASSSQMSSRASDSSLRYRSTTTSDQYE-GP-SLDLQLS 60

Query: 61  ISVRPIRPTAECVFKYEKVMKPEA---ASCVEALKWQAAEQIRLAAMEKAYAERVRELTK 120
           IS+RPI+  + CV         +     SCVE+LKWQAAEQIRLAA+EKAYAERVR+LTK
Sbjct: 61  ISLRPIQQPSNCVIAGPICDFGDVKADTSCVESLKWQAAEQIRLAAIEKAYAERVRDLTK 120

Query: 121 REIELAQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR 169
           RE+ELAQ+EF RAR MW+RAREEVEKAERMKERATR++DSTCMEITCQSCRQRFR
Sbjct: 121 REMELAQSEFARARHMWQRAREEVEKAERMKERATRKIDSTCMEITCQSCRQRFR 169

[Close]

BLAST of CmaCh10G000610 vs. TrEMBL
Match: A0A067K7B6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11289 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.4e-45
Identity = 114/185 (61.62%), Postives = 139/185 (75.14%), Query Frame = 1


Query: 1   MEDEDQKELQLLPTPHTIVSSSSSSSHMSSRP-SASSMRFRSDPYEP------------- 60
           ME++DQ+ELQLLP+ ++I SSS S +HMSSRP  +SS+R+R+                  
Sbjct: 1   MEEDDQRELQLLPSQNSIASSSCSYTHMSSRPLDSSSLRYRTPANNTTVSDHRHHHQRQF 60

Query: 61  GPGSLDLQLSISVRPIRPTAECVFKYEKVMKPEA---ASCVEALKWQAAEQIRLAAMEKA 120
           G  SLDLQLSIS+ PI+  + CV         +     SCVEALKWQAAEQIRLAA+EKA
Sbjct: 61  GGPSLDLQLSISLSPIQAPSNCVLTGPICDFSDGKTETSCVEALKWQAAEQIRLAAIEKA 120

Query: 121 YAERVRELTKREIELAQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSC 169
           YAERVRELT+RE+ELAQ+EF +AR MW+RAREEVEKAERMK++ATRQ+DSTCMEITCQSC
Sbjct: 121 YAERVRELTRREMELAQSEFAKARHMWQRAREEVEKAERMKQKATRQIDSTCMEITCQSC 180

[Close]

BLAST of CmaCh10G000610 vs. TAIR10
Match: AT3G48550.1 (AT3G48550.1 BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3))

HSP 1 Score: 132.9 bits (333), Expect = 1.9e-31
Identity = 87/170 (51.18%), Postives = 112/170 (65.88%), Query Frame = 1


Query: 2   EDEDQKELQLLPTPHTIVSSSSSSSHMSSRPSASSMRFRSDPYEPGP---GSLDLQLSIS 61
           + +  KELQLLP+P      S+ S     RP+  +    ++ +         LDL+LSIS
Sbjct: 4   QQDHHKELQLLPSP-----PSTESPVRKHRPTVITTDHHNNHHRSSSMIHHDLDLKLSIS 63

Query: 62  VRPIRPTAECVFKYEKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIEL 121
           +  I    E          P     VEALKWQAAEQIRLAA+EKAYAERVRELT+RE+E+
Sbjct: 64  LSSISTAEEL---------PNGG--VEALKWQAAEQIRLAAIEKAYAERVRELTRREMEM 123

Query: 122 AQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR 169
           AQ+EF RAR MW++AREEVE+AER+KER+  ++D+ C+EITC SCRQRFR
Sbjct: 124 AQSEFARARVMWQKAREEVERAERLKERSMTKIDTACLEITCHSCRQRFR 157

[Close]

BLAST of CmaCh10G000610 vs. TAIR10
Match: AT2G01940.3 (AT2G01940.3 C2H2-like zinc finger protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.6e-09
Identity = 32/79 (40.51%), Postives = 60/79 (75.95%), Query Frame = 1


Query: 91  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFGRARQMWERAREEVEKAERMKERATR 150
           A+EQI ++A  EKAYAE  +   KR+ E+A+ EF  A+++ ++A+ E+E+A+ +KE++ +
Sbjct: 336 ASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMK 395

Query: 151 QMDSTCMEITCQSCRQRFR 169
           ++ ST M++TCQ+C+ +F+
Sbjct: 396 KISSTIMQVTCQTCKGQFQ 414

[Close]

BLAST of CmaCh10G000610 vs. TAIR10
Match: AT1G25250.1 (AT1G25250.1 indeterminate(ID)-domain 16)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07
Identity = 49/143 (34.27%), Postives = 75/143 (52.45%), Query Frame = 1


Query: 26  SHMSSRPSASSMRFRSDPYEPGPGSLDLQLSISVRPIRPTAECVFKYEKVMKPEAASCVE 85
           S+  S   A      S P+E    SL+LQLSI +      A    K E  +  E A+  E
Sbjct: 214 SNQHSPAFAYPFNASSAPFE----SLELQLSIGMARTSAQARHNEKRETSLTKERAN-EE 273

Query: 86  ALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFGRARQMWERAREEVEKAERMKE 145
           A K                AE  R+  KR+IE+A+ +F +A+++ E A+ E+EKA  ++E
Sbjct: 274 ARK----------------AEETRQEAKRQIEMAEKDFEKAKRIREEAKTELEKAHVVRE 333

Query: 146 RATRQMDSTCMEITCQSCRQRFR 169
            A +++++T MEITC SC+Q F+
Sbjct: 334 EAIKRINATMMEITCHSCKQLFQ 335

[Close]

BLAST of CmaCh10G000610 vs. TAIR10
Match: AT1G68130.1 (AT1G68130.1 indeterminate(ID)-domain 14)

HSP 1 Score: 53.1 bits (126), Expect = 1.9e-07
Identity = 27/63 (42.86%), Postives = 44/63 (69.84%), Query Frame = 1


Query: 106 ERVRELTKREIELAQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 165
           E  R  TKR+IE+A+ EF  A+++ + AR E+ KA   +E A+R++ +T M+ITC +C+Q
Sbjct: 315 EEARRETKRQIEIAELEFAEAKRIRQHARAELHKAHLFREEASRRISATMMQITCHNCKQ 374

Query: 166 RFR 169
            F+
Sbjct: 375 HFQ 377

[Close]

BLAST of CmaCh10G000610 vs. NCBI nr
Match: gi|659128904|ref|XP_008464429.1| (PREDICTED: uncharacterized protein LOC103502321 [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 1.6e-69
Identity = 152/174 (87.36%), Postives = 160/174 (91.95%), Query Frame = 1


Query: 1   MEDEDQKELQLLPTPHTIVSSSSSSSHMSSRPSASSMRFRSDPYEPGPG-SLDLQLSISV 60
           MEDEDQKELQLLPTPH+I   +SSSSHMSSRPS SS+RFRSDP+E G G S+DLQLSIS+
Sbjct: 1   MEDEDQKELQLLPTPHSI---ASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISL 60

Query: 61  RPIRPTA---ECVFKYEKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREI 120
           RPIRP     EC+FKYE+VMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREI
Sbjct: 61  RPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREI 120

Query: 121 ELAQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRRS 171
           ELAQTEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR S
Sbjct: 121 ELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 171

[Close]

BLAST of CmaCh10G000610 vs. NCBI nr
Match: gi|449440550|ref|XP_004138047.1| (PREDICTED: protein indeterminate-domain 16 [Cucumis sativus])

HSP 1 Score: 261.5 bits (667), Expect = 1.0e-66
Identity = 151/177 (85.31%), Postives = 163/177 (92.09%), Query Frame = 1


Query: 1   MEDEDQKELQLLPTPHTIVSSSSSSSHMSSRPS-ASSMRFRSDP-YEPGPG-SLDLQLSI 60
           MEDEDQKELQLLPTPH+I  +SSS+SH+SSRPS +SS+RFRSDP +E G G S+DLQLSI
Sbjct: 1   MEDEDQKELQLLPTPHSI--ASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSI 60

Query: 61  SVRPIRPT----AECVFKYEKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTK 120
           S+RPIRP     AEC+FKYE+VMKPEAASCV+ALKWQAAEQIRLAAMEKAYAERVRELTK
Sbjct: 61  SLRPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTK 120

Query: 121 REIELAQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRRS 171
           REIELAQTEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR S
Sbjct: 121 REIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 175

[Close]

BLAST of CmaCh10G000610 vs. NCBI nr
Match: gi|645268327|ref|XP_008239477.1| (PREDICTED: uncharacterized protein LOC103338070 [Prunus mume])

HSP 1 Score: 206.8 bits (525), Expect = 2.9e-50
Identity = 126/182 (69.23%), Postives = 139/182 (76.37%), Query Frame = 1


Query: 1   MEDEDQKELQLLPTPHTIVSSSSSSSHMSSRPSASSMRFR-------SDPYEPGPGSLDL 60
           ME +DQKELQLLP+PH I   +SSSS  +SRPS SS+R+         D    GP SLDL
Sbjct: 1   MEGDDQKELQLLPSPHLI---TSSSSQRTSRPSDSSIRYHRSSKAAVQDALLEGPNSLDL 60

Query: 61  QLSISVRPIRPTAE---CVFKYE----KVMKPEAASCVEALKWQAAEQIRLAAMEKAYAE 120
           QLSISVRPIR  +    CV         V+KP+ A CVEALKWQAAEQIRLAAMEKAYAE
Sbjct: 61  QLSISVRPIRAASSSDRCVVSKPVCDFDVLKPKTAGCVEALKWQAAEQIRLAAMEKAYAE 120

Query: 121 RVRELTKREIELAQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQR 169
           RVRELT+RE+ELAQ+EF RAR MWERAREEVEKAERMKE+A  QMDSTCMEITCQSCRQR
Sbjct: 121 RVRELTRREMELAQSEFTRARHMWERAREEVEKAERMKEKAMLQMDSTCMEITCQSCRQR 179

[Close]

BLAST of CmaCh10G000610 vs. NCBI nr
Match: gi|595851690|ref|XP_007210164.1| (hypothetical protein PRUPE_ppa021164mg [Prunus persica])

HSP 1 Score: 205.7 bits (522), Expect = 6.5e-50
Identity = 125/182 (68.68%), Postives = 139/182 (76.37%), Query Frame = 1


Query: 1   MEDEDQKELQLLPTPHTIVSSSSSSSHMSSRPSASSMRFR-------SDPYEPGPGSLDL 60
           ME +DQKELQLLP+PH +   +SSSS  +SRPS SS+R+         D    GP SLDL
Sbjct: 1   MEGDDQKELQLLPSPHLM---TSSSSQRTSRPSDSSIRYHRSSKAAVQDALLEGPNSLDL 60

Query: 61  QLSISVRPIRPTAE---CVFKYE----KVMKPEAASCVEALKWQAAEQIRLAAMEKAYAE 120
           QLSISVRPIR  +    CV         V+KP+ A CVEALKWQAAEQIRLAAMEKAYAE
Sbjct: 61  QLSISVRPIRAASSSDHCVVSKPVCDFDVLKPKTAGCVEALKWQAAEQIRLAAMEKAYAE 120

Query: 121 RVRELTKREIELAQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQR 169
           RVRELT+RE+ELAQ+EF RAR MWERAREEVEKAERMKE+A  QMDSTCMEITCQSCRQR
Sbjct: 121 RVRELTRREMELAQSEFTRARHMWERAREEVEKAERMKEKAMLQMDSTCMEITCQSCRQR 179

[Close]

BLAST of CmaCh10G000610 vs. NCBI nr
Match: gi|731426828|ref|XP_010663747.1| (PREDICTED: uncharacterized protein LOC100242196 [Vitis vinifera])

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49
Identity = 124/176 (70.45%), Postives = 143/176 (81.25%), Query Frame = 1


Query: 1   MEDEDQKELQLLPTPHTIVSSSSSSSHMSSRPSASSMRFRS---DPYEPGPGSLDLQLSI 60
           ME++DQKELQLLP+PH    S +SSS MS RPS SS+R+R    DP+E GPG LDLQLSI
Sbjct: 1   MEEDDQKELQLLPSPH----SMASSSRMSGRPSDSSLRYRGIGGDPFE-GPG-LDLQLSI 60

Query: 61  SVRPIRPTAECVF-----KYEKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELT 120
           S+RPIRP  E V      +Y  V   + ASCV+ALKWQAAEQIRLAAMEKAYAERVRELT
Sbjct: 61  SLRPIRPPPEYVLAGQICEYGDVK--QEASCVDALKWQAAEQIRLAAMEKAYAERVRELT 120

Query: 121 KREIELAQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR 169
           +RE+ELAQ+EF RAR MWERA EEVEKAE+MKE+A R++DSTCMEITCQ+CRQRFR
Sbjct: 121 RREMELAQSEFARARHMWERAHEEVEKAEKMKEKAMRRIDSTCMEITCQACRQRFR 168

The following BLAST results are available for this feature:

BLAST of CmaCh10G000610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IDD15_ARATH	2.8e-08	40.51	Protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana GN=SGR5 PE=1 SV=1	[more]
IDD16_ARATH	2.0e-06	34.27	Protein indeterminate-domain 16 OS=Arabidopsis thaliana GN=IDD16 PE=2 SV=1	[more]
IDD14_ARATH	3.4e-06	42.86	Protein indeterminate-domain 14 OS=Arabidopsis thaliana GN=IDD14 PE=1 SV=1	[more]

BLAST of CmaCh10G000610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRS8_CUCSA	6.9e-67	85.31	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G001530 PE=4 SV=1	[more]
M5WPY3_PRUPE	4.5e-50	68.68	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021164mg PE=4 SV=1	[more]
A5BWN7_VITVI	7.7e-50	70.45	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g01360 PE=4 SV=...	[more]
A0A061FYZ0_THECC	1.6e-47	70.29	Uncharacterized protein OS=Theobroma cacao GN=TCM_014645 PE=4 SV=1	[more]
A0A067K7B6_JATCU	4.4e-45	61.62	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11289 PE=4 SV=1	[more]

BLAST of CmaCh10G000610 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G48550.1	1.9e-31	51.18	BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger pr...	[more]
AT2G01940.3	1.6e-09	40.51	C2H2-like zinc finger protein	[more]
AT1G25250.1	1.1e-07	34.27	indeterminate(ID)-domain 16	[more]
AT1G68130.1	1.9e-07	42.86	indeterminate(ID)-domain 14	[more]

BLAST of CmaCh10G000610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128904\|ref\|XP_008464429.1\|	1.6e-69	87.36	PREDICTED: uncharacterized protein LOC103502321 [Cucumis melo]	[more]
gi\|449440550\|ref\|XP_004138047.1\|	1.0e-66	85.31	PREDICTED: protein indeterminate-domain 16 [Cucumis sativus]	[more]
gi\|645268327\|ref\|XP_008239477.1\|	2.9e-50	69.23	PREDICTED: uncharacterized protein LOC103338070 [Prunus mume]	[more]
gi\|595851690\|ref\|XP_007210164.1\|	6.5e-50	68.68	hypothetical protein PRUPE_ppa021164mg [Prunus persica]	[more]
gi\|731426828\|ref\|XP_010663747.1\|	1.1e-49	70.45	PREDICTED: uncharacterized protein LOC100242196 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009630	gravitropism
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G000610.1	CmaCh10G000610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 130..157 scor
None	No IPR available	PANTHER	PTHR34946	FAMILY NOT NAMED	coord: 1..168 score: 5.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh10G000610	Cucsa.157330	Cucumber (Gy14) v1	cgycmaB0433
CmaCh10G000610	Cla019276	Watermelon (97103) v1	cmawmB072
CmaCh10G000610	Csa1G001530	Cucumber (Chinese Long) v2	cmacuB048
CmaCh10G000610	MELO3C026206	Melon (DHL92) v3.5.1	cmameB065
CmaCh10G000610	ClCG06G017900	Watermelon (Charleston Gray)	cmawcgB072
CmaCh10G000610	CSPI01G00530	Wild cucumber (PI 183967)	cmacpiB049
CmaCh10G000610	CmoCh11G000340	Cucurbita moschata (Rifu)	cmacmoB069
CmaCh10G000610	CmoCh10G000550	Cucurbita moschata (Rifu)	cmacmoB067
CmaCh10G000610	Lsi06G016420	Bottle gourd (USVL1VR-Ls)	cmalsiB072
CmaCh10G000610	Cp4.1LG18g09050	Cucurbita pepo (Zucchini)	cmacpeB080
CmaCh10G000610	Cp4.1LG04g16030	Cucurbita pepo (Zucchini)	cmacpeB094
CmaCh10G000610	MELO3C026206.2	Melon (DHL92) v3.6.1	cmamedB068
CmaCh10G000610	CsaV3_1G000550	Cucumber (Chinese Long) v3	cmacucB0058
CmaCh10G000610	Cla97C06G127630	Watermelon (97103) v2	cmawmbB082
CmaCh10G000610	CsGy1G000540	Cucumber (Gy14) v2	cgybcmaB004
CmaCh10G000610	Carg20168	Silver-seed gourd	carcmaB1448
CmaCh10G000610	Carg10280	Silver-seed gourd	carcmaB0510

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh10G000610	CmaCh11G000320	Cucurbita maxima (Rimu)	cmacmaB073

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh10G000610	Cucumber (Gy14) v2	cgybcmaB025
CmaCh10G000610	Cucumber (Gy14) v2	cgybcmaB289
CmaCh10G000610	Melon (DHL92) v3.6.1	cmamedB053
CmaCh10G000610	Silver-seed gourd	carcmaB0686
CmaCh10G000610	Silver-seed gourd	carcmaB1391
CmaCh10G000610	Cucumber (Chinese Long) v3	cmacucB0078
CmaCh10G000610	Cucumber (Chinese Long) v3	cmacucB0085
CmaCh10G000610	Watermelon (97103) v2	cmawmbB068
CmaCh10G000610	Watermelon (97103) v2	cmawmbB077
CmaCh10G000610	Wax gourd	cmawgoB0080
CmaCh10G000610	Wax gourd	cmawgoB0066
CmaCh10G000610	Cucurbita maxima (Rimu)	cmacmaB092
CmaCh10G000610	Cucurbita maxima (Rimu)	cmacmaB101
CmaCh10G000610	Cucumber (Gy14) v1	cgycmaB1082
CmaCh10G000610	Cucurbita moschata (Rifu)	cmacmoB084
CmaCh10G000610	Wild cucumber (PI 183967)	cmacpiB063
CmaCh10G000610	Cucumber (Chinese Long) v2	cmacuB071
CmaCh10G000610	Melon (DHL92) v3.5.1	cmameB051
CmaCh10G000610	Watermelon (Charleston Gray)	cmawcgB061
CmaCh10G000610	Watermelon (97103) v1	cmawmB053
CmaCh10G000610	Cucurbita pepo (Zucchini)	cmacpeB082
CmaCh10G000610	Bottle gourd (USVL1VR-Ls)	cmalsiB056