CmaCh09G012040 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G012040
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	ethylene response DNA binding factor 3
Location	Cma_Chr09 : 7929262 .. 7929747 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTAAAACTCAACCACAACTTATCGAACGTCGACTTGGATCTAACGTTTCGATTTCGAGTTCTTTTCGAGGGGTTCGAAAGCAGAGTTGGGGTCGCTATGTATCTGAGATACGGTTACCAGGGAAGAAGACACGTGTGTGGCTTGGCTCCTTCGCCTCCCCAAAGATGGTCGCACGAGCCTACGACTCGGCAGCTGTATTTTTGAGAGGCACCTCTGCCTTGCTCAACTTCCCTGACTCTGTCGGCTCGCTCCAACAACCGGAGTCATGCTCGAGAGAACATATTCAATCGGCAGCGGCAAAGGCAGCAGCGCAAATGAGAGAGATGGAGGTTGGAGAGAGAAGGGCGAGCAACGGATTGAGTCGGACCATGTTTGAGGAGATGAAGGAAGTGCCATTGTTGAGTCCATTGAGGTTGGCTTGGCTTGGGATTGGACCAGCCTCGGACGAAGAAGACAATTTGTTATTACCCGACTATTTCTAA

mRNA sequence

ATGACTAAAACTCAACCACAACTTATCGAACGTCGACTTGGATCTAACGTTTCGATTTCGAGTTCTTTTCGAGGGGTTCGAAAGCAGAGTTGGGGTCGCTATGTATCTGAGATACGGTTACCAGGGAAGAAGACACGTGTGTGGCTTGGCTCCTTCGCCTCCCCAAAGATGGTCGCACGAGCCTACGACTCGGCAGCTGTATTTTTGAGAGGCACCTCTGCCTTGCTCAACTTCCCTGACTCTGTCGGCTCGCTCCAACAACCGGAGTCATGCTCGAGAGAACATATTCAATCGGCAGCGGCAAAGGCAGCAGCGCAAATGAGAGAGATGGAGGTTGGAGAGAGAAGGGCGAGCAACGGATTGAGTCGGACCATGTTTGAGGAGATGAAGGAAGTGCCATTGTTGAGTCCATTGAGGTTGGCTTGGCTTGGGATTGGACCAGCCTCGGACGAAGAAGACAATTTGTTATTACCCGACTATTTCTAA

Coding sequence (CDS)

ATGACTAAAACTCAACCACAACTTATCGAACGTCGACTTGGATCTAACGTTTCGATTTCGAGTTCTTTTCGAGGGGTTCGAAAGCAGAGTTGGGGTCGCTATGTATCTGAGATACGGTTACCAGGGAAGAAGACACGTGTGTGGCTTGGCTCCTTCGCCTCCCCAAAGATGGTCGCACGAGCCTACGACTCGGCAGCTGTATTTTTGAGAGGCACCTCTGCCTTGCTCAACTTCCCTGACTCTGTCGGCTCGCTCCAACAACCGGAGTCATGCTCGAGAGAACATATTCAATCGGCAGCGGCAAAGGCAGCAGCGCAAATGAGAGAGATGGAGGTTGGAGAGAGAAGGGCGAGCAACGGATTGAGTCGGACCATGTTTGAGGAGATGAAGGAAGTGCCATTGTTGAGTCCATTGAGGTTGGCTTGGCTTGGGATTGGACCAGCCTCGGACGAAGAAGACAATTTGTTATTACCCGACTATTTCTAA

Protein sequence

MTKTQPQLIERRLGSNVSISSSFRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSAAVFLRGTSALLNFPDSVGSLQQPESCSREHIQSAAAKAAAQMREMEVGERRASNGLSRTMFEEMKEVPLLSPLRLAWLGIGPASDEEDNLLLPDYF

Homology

[Close]

BLAST of CmaCh09G012040 vs. Swiss-Prot
Match: ERF22_ARATH (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF022 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.0e-25
Identity = 63/139 (45.32%), Postives = 88/139 (63.31%), Query Frame = 1


Query: 22  SFRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSAAVFLRGTSALLNFPDS 81
           S+RG+R++ WG++VSEIR PGKKTR+WLGS+ + +M A AYD+AA+ LRG    LNFP+ 
Sbjct: 19  SYRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPEL 78

Query: 82  VGSLQQPESCSREHIQSAAAKAAAQMR-------EMEVGERRASNGLSRTMFEEMKEVPL 141
           V S  +PES S EHIQ+AA  AA   +        +E G+  +  GLS    + + E PL
Sbjct: 79  VDSFPRPESSSSEHIQAAAQDAALMFKPGRLSEPALESGQGLSRVGLSPDQIQAINESPL 138

Query: 142 LSPLRLAWLGIGPASDEED 154
            SP R+ W+     +D E+
Sbjct: 139 DSP-RMGWMQDLEVADYEE 156

[Close]

BLAST of CmaCh09G012040 vs. Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.6e-21
Identity = 49/82 (59.76%), Postives = 64/82 (78.05%), Query Frame = 1


Query: 23  FRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSAAVFLRGTSALLNFPDSV 82
           +RGVRK++WG++VSEIR P KK+R+WLG+F SP+M ARA+D AA+ ++G SA+LNFPD  
Sbjct: 36  YRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLA 95

Query: 83  GSLQQPESCSREHIQSAAAKAA 105
           GS  +P S S   IQ AA KAA
Sbjct: 96  GSFPRPSSLSPRDIQVAALKAA 117

[Close]

BLAST of CmaCh09G012040 vs. Swiss-Prot
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF036 PE=2 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 5.1e-20
Identity = 55/110 (50.00%), Postives = 77/110 (70.00%), Query Frame = 1


Query: 11  RRLGSNVSISSS-----FRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSA 70
           RR  S+ S SSS     +RGVR +SWG++VSEIR P KKTR+WLG+F +  M ARA+D A
Sbjct: 44  RRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVA 103

Query: 71  AVFLRGTSALLNFPDSVGSLQQPESCSREHIQSAAAKAAAQMREMEVGER 116
           A+ ++G+SA+LNFP+      +P S S   IQ+AAA+AAA + E ++ E+
Sbjct: 104 ALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEEKLLEK 153

[Close]

BLAST of CmaCh09G012040 vs. Swiss-Prot
Match: ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF035 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.6e-20
Identity = 51/98 (52.04%), Postives = 71/98 (72.45%), Query Frame = 1


Query: 11  RRLGSNVSISS----SFRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSAA 70
           +R  SNVS  +    S+RGVR +SWG++VSEIR P KK+R+WLG++ + +M ARA+D AA
Sbjct: 55  KRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAA 114

Query: 71  VFLRGTSALLNFPDSVGSLQQPESCSREHIQSAAAKAA 105
           + ++G S  LNFP+  G L +P SCS + IQ+AA KAA
Sbjct: 115 LAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAA 152

[Close]

BLAST of CmaCh09G012040 vs. Swiss-Prot
Match: ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.6e-20
Identity = 47/92 (51.09%), Postives = 67/92 (72.83%), Query Frame = 1


Query: 23  FRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSAAVFLRGTSALLNFPDSV 82
           + GVRK+ WG++VSEIR P KK+R+WLGSF  P+M A+AYD AA  L+G  A LNFP+ +
Sbjct: 45  YHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEEI 104

Query: 83  GSLQQPESCSREHIQSAAAKAAAQMREMEVGE 115
             L +P +C+   IQ AAAKAA  ++ +++G+
Sbjct: 105 EDLPRPSTCTPRDIQVAAAKAANAVKIIKMGD 136

[Close]

BLAST of CmaCh09G012040 vs. TrEMBL
Match: A0A0A0KSQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G647260 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.9e-54
Identity = 120/167 (71.86%), Postives = 133/167 (79.64%), Query Frame = 1


Query: 1   MTKTQPQLIERRLGSNVSISSSFRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVAR 60
           MT+ QP    R LG++ SI+  FRGVRK+SWGRYVSEIRLPGKKTRVWLGSFASP+M AR
Sbjct: 1   MTQAQP----RHLGASGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60

Query: 61  AYDSAAVFLRGTSALLNFPDSVGSLQQPESCSREHIQSAAAKAAAQMREMEVGE-----R 120
           AYDSAA FLRGTSA+LNFPDSV SL QPESCSREHIQ AAAKAAAQ+R ME  E     +
Sbjct: 61  AYDSAAAFLRGTSAILNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTMETMEGDGDQQ 120

Query: 121 RASNGLSRTMFEEMKEVPLLSPLRLAWLGIGPASDEEDN-LLLPDYF 162
              +G S TMFE++KEVPLLSPLRL  LG GPA +EED  LLLP YF
Sbjct: 121 GTRSGWSSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPLLLLPTYF 163

[Close]

BLAST of CmaCh09G012040 vs. TrEMBL
Match: U5FIC5_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0019s09530g PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.4e-31
Identity = 81/134 (60.45%), Postives = 91/134 (67.91%), Query Frame = 1


Query: 23  FRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSAAVFLRGTSALLNFPDSV 82
           F GVRK+SWGRYVSEIRLPGKKTRVWLGSF SP+M ARA+DSAA FL+G SA LNFPDSV
Sbjct: 76  FHGVRKRSWGRYVSEIRLPGKKTRVWLGSFGSPEMAARAHDSAAFFLKGNSACLNFPDSV 135

Query: 83  GSLQQPESCSREHIQSAAAKAAAQMREMEVG-----ERRASNG------------LSRTM 140
           GSL +P+SCS + IQ AAAKAA    E  VG     E   S G            +    
Sbjct: 136 GSLPRPKSCSSKDIQLAAAKAATGFDETRVGNVVGFEDCESGGEPDSSIWLGLGEIETVS 195

[Close]

BLAST of CmaCh09G012040 vs. TrEMBL
Match: A9PL85_POPTR (TINY-like protein OS=Populus trichocarpa GN=TINYL16 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.4e-31
Identity = 81/134 (60.45%), Postives = 91/134 (67.91%), Query Frame = 1


Query: 23  FRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSAAVFLRGTSALLNFPDSV 82
           F GVRK+SWGRYVSEIRLPGKKTRVWLGSF SP+M ARA+DSAA FL+G SA LNFPDSV
Sbjct: 36  FHGVRKRSWGRYVSEIRLPGKKTRVWLGSFGSPEMAARAHDSAAFFLKGNSACLNFPDSV 95

Query: 83  GSLQQPESCSREHIQSAAAKAAAQMREMEVG-----ERRASNG------------LSRTM 140
           GSL +P+SCS + IQ AAAKAA    E  VG     E   S G            +    
Sbjct: 96  GSLPRPKSCSSKDIQLAAAKAATGFDESRVGNGVGFEDCESGGEPDSSIWLGLGEIETVS 155

[Close]

BLAST of CmaCh09G012040 vs. TrEMBL
Match: A9PL84_POPTR (TINY-like protein OS=Populus trichocarpa GN=TINYL15 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.4e-31
Identity = 81/134 (60.45%), Postives = 91/134 (67.91%), Query Frame = 1


Query: 23  FRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSAAVFLRGTSALLNFPDSV 82
           F GVRK+SWGRYVSEIRLPGKKTRVWLGSF SP+M ARA+DSAA FL+G SA LNFPDSV
Sbjct: 36  FHGVRKRSWGRYVSEIRLPGKKTRVWLGSFGSPEMAARAHDSAAFFLKGNSACLNFPDSV 95

Query: 83  GSLQQPESCSREHIQSAAAKAAAQMREMEVG-----ERRASNG------------LSRTM 140
           GSL +P+SCS + IQ AAAKAA    E  VG     E   S G            +    
Sbjct: 96  GSLPRPKSCSSKDIQLAAAKAATGFDESRVGNGVGFEDCESGGEPDGSIWLGLGEIETVS 155

[Close]

BLAST of CmaCh09G012040 vs. TrEMBL
Match: K7LFN0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G233800 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 7.6e-31
Identity = 82/147 (55.78%), Postives = 101/147 (68.71%), Query Frame = 1


Query: 2   TKTQPQLIERRLGSNVSIS--------SSFRGVRKQSWGRYVSEIRLPGKKTRVWLGSFA 61
           T+ +PQL+ R L    SIS        S+FRGVRK+SWGRYVSEIRLPG+KTR+WLGSF 
Sbjct: 25  TRLKPQLLIRVL-LMCSISEKAKRKRQSAFRGVRKRSWGRYVSEIRLPGQKTRIWLGSFG 84

Query: 62  SPKMVARAYDSAAVFLRGTSALLNFPDSVGSLQQPESCSREHIQSAAAKAAAQMREMEVG 121
           SP+M ARAYDSAA FL+GTSA LNFPD V SL +P S SR  IQSAAA+AA      +  
Sbjct: 85  SPEMAARAYDSAAFFLKGTSATLNFPDLVHSLPRPLSSSRRDIQSAAAEAALHSPPPKEE 144

Query: 122 ERRASNGLSRTMFEEMKEVPLLSPLRL 141
           +       + + F ++ E PL+SPLR+
Sbjct: 145 QESIFTSTTTSSFHDVMEAPLMSPLRV 170

[Close]

BLAST of CmaCh09G012040 vs. TAIR10
Match: AT1G33760.1 (AT1G33760.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 115.9 bits (289), Expect = 2.3e-26
Identity = 63/139 (45.32%), Postives = 88/139 (63.31%), Query Frame = 1


Query: 22  SFRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSAAVFLRGTSALLNFPDS 81
           S+RG+R++ WG++VSEIR PGKKTR+WLGS+ + +M A AYD+AA+ LRG    LNFP+ 
Sbjct: 19  SYRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPEL 78

Query: 82  VGSLQQPESCSREHIQSAAAKAAAQMR-------EMEVGERRASNGLSRTMFEEMKEVPL 141
           V S  +PES S EHIQ+AA  AA   +        +E G+  +  GLS    + + E PL
Sbjct: 79  VDSFPRPESSSSEHIQAAAQDAALMFKPGRLSEPALESGQGLSRVGLSPDQIQAINESPL 138

Query: 142 LSPLRLAWLGIGPASDEED 154
            SP R+ W+     +D E+
Sbjct: 139 DSP-RMGWMQDLEVADYEE 156

[Close]

BLAST of CmaCh09G012040 vs. TAIR10
Match: AT5G25810.1 (AT5G25810.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 102.4 bits (254), Expect = 2.6e-22
Identity = 49/82 (59.76%), Postives = 64/82 (78.05%), Query Frame = 1


Query: 23  FRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSAAVFLRGTSALLNFPDSV 82
           +RGVRK++WG++VSEIR P KK+R+WLG+F SP+M ARA+D AA+ ++G SA+LNFPD  
Sbjct: 36  YRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLA 95

Query: 83  GSLQQPESCSREHIQSAAAKAA 105
           GS  +P S S   IQ AA KAA
Sbjct: 96  GSFPRPSSLSPRDIQVAALKAA 117

[Close]

BLAST of CmaCh09G012040 vs. TAIR10
Match: AT3G16280.1 (AT3G16280.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 99.0 bits (245), Expect = 2.9e-21
Identity = 55/110 (50.00%), Postives = 77/110 (70.00%), Query Frame = 1


Query: 11  RRLGSNVSISSS-----FRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSA 70
           RR  S+ S SSS     +RGVR +SWG++VSEIR P KKTR+WLG+F +  M ARA+D A
Sbjct: 44  RRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVA 103

Query: 71  AVFLRGTSALLNFPDSVGSLQQPESCSREHIQSAAAKAAAQMREMEVGER 116
           A+ ++G+SA+LNFP+      +P S S   IQ+AAA+AAA + E ++ E+
Sbjct: 104 ALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEEKLLEK 153

[Close]

BLAST of CmaCh09G012040 vs. TAIR10
Match: AT1G01250.1 (AT1G01250.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 98.2 bits (243), Expect = 4.9e-21
Identity = 47/92 (51.09%), Postives = 67/92 (72.83%), Query Frame = 1


Query: 23  FRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSAAVFLRGTSALLNFPDSV 82
           + GVRK+ WG++VSEIR P KK+R+WLGSF  P+M A+AYD AA  L+G  A LNFP+ +
Sbjct: 45  YHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEEI 104

Query: 83  GSLQQPESCSREHIQSAAAKAAAQMREMEVGE 115
             L +P +C+   IQ AAAKAA  ++ +++G+
Sbjct: 105 EDLPRPSTCTPRDIQVAAAKAANAVKIIKMGD 136

[Close]

BLAST of CmaCh09G012040 vs. TAIR10
Match: AT3G60490.1 (AT3G60490.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 98.2 bits (243), Expect = 4.9e-21
Identity = 51/98 (52.04%), Postives = 71/98 (72.45%), Query Frame = 1


Query: 11  RRLGSNVSISS----SFRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSAA 70
           +R  SNVS  +    S+RGVR +SWG++VSEIR P KK+R+WLG++ + +M ARA+D AA
Sbjct: 55  KRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAA 114

Query: 71  VFLRGTSALLNFPDSVGSLQQPESCSREHIQSAAAKAA 105
           + ++G S  LNFP+  G L +P SCS + IQ+AA KAA
Sbjct: 115 LAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAA 152

[Close]

BLAST of CmaCh09G012040 vs. NCBI nr
Match: gi|449447711|ref|XP_004141611.1| (PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 7.0e-54
Identity = 120/167 (71.86%), Postives = 133/167 (79.64%), Query Frame = 1


Query: 1   MTKTQPQLIERRLGSNVSISSSFRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVAR 60
           MT+ QP    R LG++ SI+  FRGVRK+SWGRYVSEIRLPGKKTRVWLGSFASP+M AR
Sbjct: 1   MTQAQP----RHLGASGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60

Query: 61  AYDSAAVFLRGTSALLNFPDSVGSLQQPESCSREHIQSAAAKAAAQMREMEVGE-----R 120
           AYDSAA FLRGTSA+LNFPDSV SL QPESCSREHIQ AAAKAAAQ+R ME  E     +
Sbjct: 61  AYDSAAAFLRGTSAILNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTMETMEGDGDQQ 120

Query: 121 RASNGLSRTMFEEMKEVPLLSPLRLAWLGIGPASDEEDN-LLLPDYF 162
              +G S TMFE++KEVPLLSPLRL  LG GPA +EED  LLLP YF
Sbjct: 121 GTRSGWSSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPLLLLPTYF 163

[Close]

BLAST of CmaCh09G012040 vs. NCBI nr
Match: gi|659119539|ref|XP_008459710.1| (PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis melo])

HSP 1 Score: 213.0 bits (541), Expect = 3.8e-52
Identity = 117/165 (70.91%), Postives = 131/165 (79.39%), Query Frame = 1


Query: 1   MTKTQPQLIERRLGSNVSISSSFRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVAR 60
           MT+ Q Q     L +N SI+  FRGVRK+SWGRYVSEIRLPGKKTRVWLGSFASP+M AR
Sbjct: 1   MTQAQQQ----HLRANGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60

Query: 61  AYDSAAVFLRGTSALLNFPDSVGSLQQPESCSREHIQSAAAKAAAQMREMEV---GERRA 120
           AYDSAA FLRG SA+LNFPDSV SL QPESCSREHIQ AAAKAAAQ+R   V    ++R 
Sbjct: 61  AYDSAAAFLRGNSAVLNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTETVEGGDQQRT 120

Query: 121 SNGLSRTMFEEMKEVPLLSPLRLAWLGIGPASDEED-NLLLPDYF 162
            +G S TMFE++KEVPLLSPLRL  LG GPA +EED +LLLP YF
Sbjct: 121 RSGWSSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPSLLLPTYF 161

[Close]

BLAST of CmaCh09G012040 vs. NCBI nr
Match: gi|1009178830|ref|XP_015870745.1| (PREDICTED: ethylene-responsive transcription factor ERF039-like [Ziziphus jujuba])

HSP 1 Score: 144.4 bits (363), Expect = 1.7e-31
Identity = 84/165 (50.91%), Postives = 103/165 (62.42%), Query Frame = 1


Query: 2   TKTQPQLIERRLGSNVSISSS--------FRGVRKQSWGRYVSEIRLPGKKTRVWLGSFA 61
           TKT  Q + +R  ++ + +++        FRGVRK+SWGRYVSEIRLPGKKTRVWLGSF 
Sbjct: 14  TKTHSQSLSKRASNSTTTTTTAARQHDTPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFG 73

Query: 62  SPKMVARAYDSAAVFLRGTSALLNFPDSVGSLQQPESCSREHIQSAAAKAAAQMREMEVG 121
           SP+M ARAYDSAA +L+G SA LNFPD   SL +PES SR  IQSAAAKAA Q +E    
Sbjct: 74  SPEMAARAYDSAAFYLKGNSASLNFPDLAESLPRPESSSRRDIQSAAAKAALQPKESRSI 133

Query: 122 ERRASNGLSRTM-------------------FEEMKEVPLLSPLR 140
              +   +SR +                   F+E+KE PLLSP R
Sbjct: 134 VNSSRESVSRELTDLSTEYWWGLDFEGGTVSFDEVKEAPLLSPFR 178

[Close]

BLAST of CmaCh09G012040 vs. NCBI nr
Match: gi|148372095|gb|ABQ62979.1| (TINY-like protein [Populus trichocarpa])

HSP 1 Score: 142.9 bits (359), Expect = 4.9e-31
Identity = 81/134 (60.45%), Postives = 91/134 (67.91%), Query Frame = 1


Query: 23  FRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSAAVFLRGTSALLNFPDSV 82
           F GVRK+SWGRYVSEIRLPGKKTRVWLGSF SP+M ARA+DSAA FL+G SA LNFPDSV
Sbjct: 36  FHGVRKRSWGRYVSEIRLPGKKTRVWLGSFGSPEMAARAHDSAAFFLKGNSACLNFPDSV 95

Query: 83  GSLQQPESCSREHIQSAAAKAAAQMREMEVG-----ERRASNG------------LSRTM 140
           GSL +P+SCS + IQ AAAKAA    E  VG     E   S G            +    
Sbjct: 96  GSLPRPKSCSSKDIQLAAAKAATGFDESRVGNGVGFEDCESGGEPDSSIWLGLGEIETVS 155

[Close]

BLAST of CmaCh09G012040 vs. NCBI nr
Match: gi|566238626|ref|XP_006371370.1| (hypothetical protein POPTR_0019s09530g, partial [Populus trichocarpa])

HSP 1 Score: 142.9 bits (359), Expect = 4.9e-31
Identity = 81/134 (60.45%), Postives = 91/134 (67.91%), Query Frame = 1


Query: 23  FRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSAAVFLRGTSALLNFPDSV 82
           F GVRK+SWGRYVSEIRLPGKKTRVWLGSF SP+M ARA+DSAA FL+G SA LNFPDSV
Sbjct: 76  FHGVRKRSWGRYVSEIRLPGKKTRVWLGSFGSPEMAARAHDSAAFFLKGNSACLNFPDSV 135

Query: 83  GSLQQPESCSREHIQSAAAKAAAQMREMEVG-----ERRASNG------------LSRTM 140
           GSL +P+SCS + IQ AAAKAA    E  VG     E   S G            +    
Sbjct: 136 GSLPRPKSCSSKDIQLAAAKAATGFDETRVGNVVGFEDCESGGEPDSSIWLGLGEIETVS 195

The following BLAST results are available for this feature:

BLAST of CmaCh09G012040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF22_ARATH	4.0e-25	45.32	Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF02...	[more]
TINY_ARATH	4.6e-21	59.76	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE...	[more]
ERF36_ARATH	5.1e-20	50.00	Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF03...	[more]
ERF35_ARATH	8.6e-20	52.04	Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF03...	[more]
ERF23_ARATH	8.6e-20	51.09	Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF02...	[more]

BLAST of CmaCh09G012040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSQ8_CUCSA	4.9e-54	71.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G647260 PE=4 SV=1	[more]
U5FIC5_POPTR	3.4e-31	60.45	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0019s09530g P...	[more]
A9PL85_POPTR	3.4e-31	60.45	TINY-like protein OS=Populus trichocarpa GN=TINYL16 PE=4 SV=1	[more]
A9PL84_POPTR	3.4e-31	60.45	TINY-like protein OS=Populus trichocarpa GN=TINYL15 PE=4 SV=1	[more]
K7LFN0_SOYBN	7.6e-31	55.78	Uncharacterized protein OS=Glycine max GN=GLYMA_09G233800 PE=4 SV=1	[more]

BLAST of CmaCh09G012040 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G33760.1	2.3e-26	45.32	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	2.6e-22	59.76	Integrase-type DNA-binding superfamily protein	[more]
AT3G16280.1	2.9e-21	50.00	Integrase-type DNA-binding superfamily protein	[more]
AT1G01250.1	4.9e-21	51.09	Integrase-type DNA-binding superfamily protein	[more]
AT3G60490.1	4.9e-21	52.04	Integrase-type DNA-binding superfamily protein	[more]

BLAST of CmaCh09G012040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447711\|ref\|XP_004141611.1\|	7.0e-54	71.86	PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis sativus...	[more]
gi\|659119539\|ref\|XP_008459710.1\|	3.8e-52	70.91	PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis melo]	[more]
gi\|1009178830\|ref\|XP_015870745.1\|	1.7e-31	50.91	PREDICTED: ethylene-responsive transcription factor ERF039-like [Ziziphus jujuba...	[more]
gi\|148372095\|gb\|ABQ62979.1\|	4.9e-31	60.45	TINY-like protein [Populus trichocarpa]	[more]
gi\|566238626\|ref\|XP_006371370.1\|	4.9e-31	60.45	hypothetical protein POPTR_0019s09530g, partial [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G012040.1	CmaCh09G012040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 61..81 score: 5.1E-11coord: 23..34 score: 5.1
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 22..81 score: 4.1
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 22..85 score: 2.5
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 22..79 score: 1
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 21..81 score: 2.35
None	No IPR available	PANTHER	PTHR31985	FAMILY NOT NAMED	coord: 7..131 score: 1.8
None	No IPR available	PANTHER	PTHR31985:SF26	SUBFAMILY NOT NAMED	coord: 7..131 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G012040	Cucsa.237800	Cucumber (Gy14) v1	cgycmaB0658
CmaCh09G012040	Cla012379	Watermelon (97103) v1	cmawmB017
CmaCh09G012040	Csa5G647260	Cucumber (Chinese Long) v2	cmacuB031
CmaCh09G012040	MELO3C022119	Melon (DHL92) v3.5.1	cmameB011
CmaCh09G012040	ClCG08G001830	Watermelon (Charleston Gray)	cmawcgB032
CmaCh09G012040	CSPI05G30310	Wild cucumber (PI 183967)	cmacpiB031
CmaCh09G012040	CmoCh01G008960	Cucurbita moschata (Rifu)	cmacmoB056
CmaCh09G012040	CmoCh09G012040	Cucurbita moschata (Rifu)	cmacmoB030
CmaCh09G012040	Lsi08G001810	Bottle gourd (USVL1VR-Ls)	cmalsiB035
CmaCh09G012040	MELO3C022119.2	Melon (DHL92) v3.6.1	cmamedB012
CmaCh09G012040	CsaV3_5G039410	Cucumber (Chinese Long) v3	cmacucB0038
CmaCh09G012040	Cla97C08G145930	Watermelon (97103) v2	cmawmbB038
CmaCh09G012040	Bhi06G000119	Wax gourd	cmawgoB0011
CmaCh09G012040	CsGy5G029710	Cucumber (Gy14) v2	cgybcmaB580
CmaCh09G012040	Carg27048	Silver-seed gourd	carcmaB0036

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G012040	Cucurbita moschata (Rifu)	cmacmoB046
CmaCh09G012040	Watermelon (97103) v1	cmawmB016
CmaCh09G012040	Cucurbita pepo (Zucchini)	cmacpeB064
CmaCh09G012040	Cucurbita maxima (Rimu)	cmacmaB048