Carg27048 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27048
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ethylene-responsive transcription factor ERF022-like
Location	Cucurbita_argyrosperma_scaffold_205 : 10649 .. 11134 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTAAAACTCAACCACAACTTATCGAACGTCGACTCGGATCTAATGTTTCAGTTTCAAGTCCCTTTCGAGGAGTACGGAAGCGGAGTTGGGGTCGCTATGTATCTGAGATACGGTTACCAGGGAAGAAGACACGAGTGTGGCTTGGCTCATTCGCCTCCCCAGAGATGGCCGCACGAGCCTACGACTCGGCAGCTGTATTTTTGAGAGGCACCTCTGCCTTGCTCAACTTTCCTGACTCTGTCGGCTCGCTCCCACAACCAGAGTCATGCTCAAGAGAACATATTCAATTGGCAGCGGCAAAGGCAGCAGCGCAAATGAGAGAGATGGAGGTTGGAGAGCGAAAGGCGAGCAACGGATTGAGTCGGACCATGTTTGAGGAGATGAAGGAAGCACCATTGTTGAGTCCATTGAGGTTGGCTTGGCTTGGGTTTGGACCAGCCTCGGACGAAGAAGACAATTTGTTATTACCAGGCTATTTCTAA

mRNA sequence

ATGACTAAAACTCAACCACAACTTATCGAACGTCGACTCGGATCTAATGTTTCAGTTTCAAGTCCCTTTCGAGGAGTACGGAAGCGGAGTTGGGGTCGCTATGTATCTGAGATACGGTTACCAGGGAAGAAGACACGAGTGTGGCTTGGCTCATTCGCCTCCCCAGAGATGGCCGCACGAGCCTACGACTCGGCAGCTGTATTTTTGAGAGGCACCTCTGCCTTGCTCAACTTTCCTGACTCTGTCGGCTCGCTCCCACAACCAGAGTCATGCTCAAGAGAACATATTCAATTGGCAGCGGCAAAGGCAGCAGCGCAAATGAGAGAGATGGAGGTTGGAGAGCGAAAGGCGAGCAACGGATTGAGTCGGACCATGTTTGAGGAGATGAAGGAAGCACCATTGTTGAGTCCATTGAGGTTGGCTTGGCTTGGGTTTGGACCAGCCTCGGACGAAGAAGACAATTTGTTATTACCAGGCTATTTCTAA

Coding sequence (CDS)

ATGACTAAAACTCAACCACAACTTATCGAACGTCGACTCGGATCTAATGTTTCAGTTTCAAGTCCCTTTCGAGGAGTACGGAAGCGGAGTTGGGGTCGCTATGTATCTGAGATACGGTTACCAGGGAAGAAGACACGAGTGTGGCTTGGCTCATTCGCCTCCCCAGAGATGGCCGCACGAGCCTACGACTCGGCAGCTGTATTTTTGAGAGGCACCTCTGCCTTGCTCAACTTTCCTGACTCTGTCGGCTCGCTCCCACAACCAGAGTCATGCTCAAGAGAACATATTCAATTGGCAGCGGCAAAGGCAGCAGCGCAAATGAGAGAGATGGAGGTTGGAGAGCGAAAGGCGAGCAACGGATTGAGTCGGACCATGTTTGAGGAGATGAAGGAAGCACCATTGTTGAGTCCATTGAGGTTGGCTTGGCTTGGGTTTGGACCAGCCTCGGACGAAGAAGACAATTTGTTATTACCAGGCTATTTCTAA

Protein sequence

MTKTQPQLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSVGSLPQPESCSREHIQLAAAKAAAQMREMEVGERKASNGLSRTMFEEMKEAPLLSPLRLAWLGFGPASDEEDNLLLPGYF

Homology

[Close]

BLAST of Carg27048 vs. NCBI nr
Match: XP_022930134.1 (ethylene-responsive transcription factor ERF022-like [Cucurbita moschata])

HSP 1 Score: 316.6 bits (810), Expect = 4.8e-83
Identity = 159/161 (98.76%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MTKTQPQLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60
           MTKTQPQLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR
Sbjct: 1   MTKTQPQLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60

Query: 61  AYDSAAVFLRGTSALLNFPDSVGSLPQPESCSREHIQLAAAKAAAQMREMEVGERKASNG 120
           AYDSAAVFLRGTSALLNFPDS+GSLPQPESCSREHIQ AAAKAAAQMREMEVGERKASNG
Sbjct: 61  AYDSAAVFLRGTSALLNFPDSIGSLPQPESCSREHIQSAAAKAAAQMREMEVGERKASNG 120

Query: 121 LSRTMFEEMKEAPLLSPLRLAWLGFGPASDEEDNLLLPGYF 162
           LSRTMFEEMKEAPLLSPLRLAWLGFGPASDEEDNLLLPGYF
Sbjct: 121 LSRTMFEEMKEAPLLSPLRLAWLGFGPASDEEDNLLLPGYF 161

[Close]

BLAST of Carg27048 vs. NCBI nr
Match: XP_023536389.1 (ethylene-responsive transcription factor ERF022-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.3 bits (804), Expect = 2.4e-82
Identity = 158/161 (98.14%), Postives = 159/161 (98.76%), Query Frame = 0


Query: 1   MTKTQPQLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60
           MTKTQPQLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR
Sbjct: 1   MTKTQPQLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60

Query: 61  AYDSAAVFLRGTSALLNFPDSVGSLPQPESCSREHIQLAAAKAAAQMREMEVGERKASNG 120
           AYDSAAVFLRGTSALLNFPDSVGSLPQPESCSREHIQ AAAKAAAQMREMEVGER+ SNG
Sbjct: 61  AYDSAAVFLRGTSALLNFPDSVGSLPQPESCSREHIQSAAAKAAAQMREMEVGERRVSNG 120

Query: 121 LSRTMFEEMKEAPLLSPLRLAWLGFGPASDEEDNLLLPGYF 162
           LSRTMFEEMKEAPLLSPLRLAWLGFGPASDEEDNLLLPGYF
Sbjct: 121 LSRTMFEEMKEAPLLSPLRLAWLGFGPASDEEDNLLLPGYF 161

[Close]

BLAST of Carg27048 vs. NCBI nr
Match: XP_022974052.1 (ethylene-responsive transcription factor ERF022-like [Cucurbita maxima])

HSP 1 Score: 298.1 bits (762), Expect = 1.8e-77
Identity = 150/161 (93.17%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MTKTQPQLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60
           MTKTQPQLIERRLGSNVS+SS FRGVRK+SWGRYVSEIRLPGKKTRVWLGSFASP+M AR
Sbjct: 1   MTKTQPQLIERRLGSNVSISSSFRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVAR 60

Query: 61  AYDSAAVFLRGTSALLNFPDSVGSLPQPESCSREHIQLAAAKAAAQMREMEVGERKASNG 120
           AYDSAAVFLRGTSALLNFPDSVGSL QPESCSREHIQ AAAKAAAQMREMEVGER+ASNG
Sbjct: 61  AYDSAAVFLRGTSALLNFPDSVGSLQQPESCSREHIQSAAAKAAAQMREMEVGERRASNG 120

Query: 121 LSRTMFEEMKEAPLLSPLRLAWLGFGPASDEEDNLLLPGYF 162
           LSRTMFEEMKE PLLSPLRLAWLG GPASDEEDNLLLP YF
Sbjct: 121 LSRTMFEEMKEVPLLSPLRLAWLGIGPASDEEDNLLLPDYF 161

[Close]

BLAST of Carg27048 vs. NCBI nr
Match: XP_004141611.1 (PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis sativus] >KGN52603.1 hypothetical protein Csa_5G647260 [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57
Identity = 125/167 (74.85%), Postives = 137/167 (82.04%), Query Frame = 0


Query: 1   MTKTQPQLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60
           MT+ QP    R LG++ S++ PFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR
Sbjct: 1   MTQAQP----RHLGASGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60

Query: 61  AYDSAAVFLRGTSALLNFPDSVGSLPQPESCSREHIQLAAAKAAAQMREMEVGE-----R 120
           AYDSAA FLRGTSA+LNFPDSV SLPQPESCSREHIQLAAAKAAAQ+R ME  E     +
Sbjct: 61  AYDSAAAFLRGTSAILNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTMETMEGDGDQQ 120

Query: 121 KASNGLSRTMFEEMKEAPLLSPLRLAWLGFGPASDEEDN-LLLPGYF 162
              +G S TMFE++KE PLLSPLRL  LGFGPA +EED  LLLP YF
Sbjct: 121 GTRSGWSSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPLLLLPTYF 163

[Close]

BLAST of Carg27048 vs. NCBI nr
Match: XP_008459710.1 (PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis melo])

HSP 1 Score: 225.7 bits (574), Expect = 1.1e-55
Identity = 121/165 (73.33%), Postives = 135/165 (81.82%), Query Frame = 0


Query: 1   MTKTQPQLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60
           MT+ Q Q     L +N S++ PFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR
Sbjct: 1   MTQAQQQ----HLRANGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60

Query: 61  AYDSAAVFLRGTSALLNFPDSVGSLPQPESCSREHIQLAAAKAAAQMREMEV---GERKA 120
           AYDSAA FLRG SA+LNFPDSV SLPQPESCSREHIQLAAAKAAAQ+R   V    +++ 
Sbjct: 61  AYDSAAAFLRGNSAVLNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTETVEGGDQQRT 120

Query: 121 SNGLSRTMFEEMKEAPLLSPLRLAWLGFGPASDEED-NLLLPGYF 162
            +G S TMFE++KE PLLSPLRL  LGFGPA +EED +LLLP YF
Sbjct: 121 RSGWSSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPSLLLPTYF 161

[Close]

BLAST of Carg27048 vs. TAIR10
Match: AT1G33760.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 122.9 bits (307), Expect = 1.8e-28
Identity = 66/138 (47.83%), Postives = 89/138 (64.49%), Query Frame = 0


Query: 23  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSV 82
           +RG+R+R WG++VSEIR PGKKTR+WLGS+ + EMAA AYD+AA+ LRG    LNFP+ V
Sbjct: 20  YRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPELV 79

Query: 83  GSLPQPESCSREHIQLAAAKAAAQMR-------EMEVGERKASNGLSRTMFEEMKEAPLL 142
            S P+PES S EHIQ AA  AA   +        +E G+  +  GLS    + + E+PL 
Sbjct: 80  DSFPRPESSSSEHIQAAAQDAALMFKPGRLSEPALESGQGLSRVGLSPDQIQAINESPLD 139

Query: 143 SPLRLAWLGFGPASDEED 154
           SP R+ W+     +D E+
Sbjct: 140 SP-RMGWMQDLEVADYEE 156

[Close]

BLAST of Carg27048 vs. TAIR10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 111.7 bits (278), Expect = 4.3e-25
Identity = 53/82 (64.63%), Postives = 67/82 (81.71%), Query Frame = 0


Query: 23  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSV 82
           +RGVRKR+WG++VSEIR P KK+R+WLG+F SPEMAARA+D AA+ ++G SA+LNFPD  
Sbjct: 36  YRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLA 95

Query: 83  GSLPQPESCSREHIQLAAAKAA 105
           GS P+P S S   IQ+AA KAA
Sbjct: 96  GSFPRPSSLSPRDIQVAALKAA 117

[Close]

BLAST of Carg27048 vs. TAIR10
Match: AT1G01250.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 107.8 bits (268), Expect = 6.1e-24
Identity = 51/92 (55.43%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 23  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSV 82
           + GVRKR WG++VSEIR P KK+R+WLGSF  PEMAA+AYD AA  L+G  A LNFP+ +
Sbjct: 45  YHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEEI 104

Query: 83  GSLPQPESCSREHIQLAAAKAAAQMREMEVGE 115
             LP+P +C+   IQ+AAAKAA  ++ +++G+
Sbjct: 105 EDLPRPSTCTPRDIQVAAAKAANAVKIIKMGD 136

[Close]

BLAST of Carg27048 vs. TAIR10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.5e-22
Identity = 49/82 (59.76%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 23  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSV 82
           +RGVR R+WG++VSEIR P KK+R+WLG+F +PEMAARA+D AA+ ++GT+A+LNFP+  
Sbjct: 51  YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELA 110

Query: 83  GSLPQPESCSREHIQLAAAKAA 105
            S P+P S S   IQ AA KAA
Sbjct: 111 DSFPRPVSLSPRDIQTAALKAA 132

[Close]

BLAST of Carg27048 vs. TAIR10
Match: AT1G71450.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 102.8 bits (255), Expect = 2.0e-22
Identity = 64/151 (42.38%), Postives = 83/151 (54.97%), Query Frame = 0


Query: 19  VSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNF 78
           V S +RGVRKR WG++VSEIR PG K R+WLGSF +PEMAA AYD AA   RG  A LNF
Sbjct: 20  VPSAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNF 79

Query: 79  PDSVGSLPQPESCSREHIQLAAAKAA------AQMREMEVGERKASN------GLSRTMF 138
           P+   SLP+P   S + I++A  +A            M+V    +SN       LS    
Sbjct: 80  PELASSLPRPADSSSDSIRMAVHEATLCRTTEGTESAMQVDSSSSSNVAPTMVRLSPREI 139

Query: 139 EEMKEAPLLSPLRLAWLGFGP---ASDEEDN 155
           + + E+ L SP  +    + P   A+D E N
Sbjct: 140 QAINESTLGSPTTMMHSTYDPMEFANDVEMN 170

[Close]

BLAST of Carg27048 vs. Swiss-Prot
Match: sp|Q9LQ28|ERF22_ARATH (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana OX=3702 GN=ERF022 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.3e-27
Identity = 66/138 (47.83%), Postives = 89/138 (64.49%), Query Frame = 0


Query: 23  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSV 82
           +RG+R+R WG++VSEIR PGKKTR+WLGS+ + EMAA AYD+AA+ LRG    LNFP+ V
Sbjct: 20  YRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPELV 79

Query: 83  GSLPQPESCSREHIQLAAAKAAAQMR-------EMEVGERKASNGLSRTMFEEMKEAPLL 142
            S P+PES S EHIQ AA  AA   +        +E G+  +  GLS    + + E+PL 
Sbjct: 80  DSFPRPESSSSEHIQAAAQDAALMFKPGRLSEPALESGQGLSRVGLSPDQIQAINESPLD 139

Query: 143 SPLRLAWLGFGPASDEED 154
           SP R+ W+     +D E+
Sbjct: 140 SP-RMGWMQDLEVADYEE 156

[Close]

BLAST of Carg27048 vs. Swiss-Prot
Match: sp|Q39127|TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 7.7e-24
Identity = 53/82 (64.63%), Postives = 67/82 (81.71%), Query Frame = 0


Query: 23  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSV 82
           +RGVRKR+WG++VSEIR P KK+R+WLG+F SPEMAARA+D AA+ ++G SA+LNFPD  
Sbjct: 36  YRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLA 95

Query: 83  GSLPQPESCSREHIQLAAAKAA 105
           GS P+P S S   IQ+AA KAA
Sbjct: 96  GSFPRPSSLSPRDIQVAALKAA 117

[Close]

BLAST of Carg27048 vs. Swiss-Prot
Match: sp|Q1ECI2|ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana OX=3702 GN=ERF023 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22
Identity = 51/92 (55.43%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 23  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSV 82
           + GVRKR WG++VSEIR P KK+R+WLGSF  PEMAA+AYD AA  L+G  A LNFP+ +
Sbjct: 45  YHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEEI 104

Query: 83  GSLPQPESCSREHIQLAAAKAAAQMREMEVGE 115
             LP+P +C+   IQ+AAAKAA  ++ +++G+
Sbjct: 105 EDLPRPSTCTPRDIQVAAAKAANAVKIIKMGD 136

[Close]

BLAST of Carg27048 vs. Swiss-Prot
Match: sp|Q9LYD3|DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-21
Identity = 49/82 (59.76%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 23  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSV 82
           +RGVR R+WG++VSEIR P KK+R+WLG+F +PEMAARA+D AA+ ++GT+A+LNFP+  
Sbjct: 51  YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELA 110

Query: 83  GSLPQPESCSREHIQLAAAKAA 105
            S P+P S S   IQ AA KAA
Sbjct: 111 DSFPRPVSLSPRDIQTAALKAA 132

[Close]

BLAST of Carg27048 vs. Swiss-Prot
Match: sp|Q9C9I2|ERF21_ARATH (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana OX=3702 GN=ERF021 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.6e-21
Identity = 64/151 (42.38%), Postives = 83/151 (54.97%), Query Frame = 0


Query: 19  VSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNF 78
           V S +RGVRKR WG++VSEIR PG K R+WLGSF +PEMAA AYD AA   RG  A LNF
Sbjct: 20  VPSAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNF 79

Query: 79  PDSVGSLPQPESCSREHIQLAAAKAA------AQMREMEVGERKASN------GLSRTMF 138
           P+   SLP+P   S + I++A  +A            M+V    +SN       LS    
Sbjct: 80  PELASSLPRPADSSSDSIRMAVHEATLCRTTEGTESAMQVDSSSSSNVAPTMVRLSPREI 139

Query: 139 EEMKEAPLLSPLRLAWLGFGP---ASDEEDN 155
           + + E+ L SP  +    + P   A+D E N
Sbjct: 140 QAINESTLGSPTTMMHSTYDPMEFANDVEMN 170

[Close]

BLAST of Carg27048 vs. TrEMBL
Match: tr|A0A0A0KSQ8|A0A0A0KSQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647260 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 7.9e-58
Identity = 125/167 (74.85%), Postives = 137/167 (82.04%), Query Frame = 0


Query: 1   MTKTQPQLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60
           MT+ QP    R LG++ S++ PFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR
Sbjct: 1   MTQAQP----RHLGASGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60

Query: 61  AYDSAAVFLRGTSALLNFPDSVGSLPQPESCSREHIQLAAAKAAAQMREMEVGE-----R 120
           AYDSAA FLRGTSA+LNFPDSV SLPQPESCSREHIQLAAAKAAAQ+R ME  E     +
Sbjct: 61  AYDSAAAFLRGTSAILNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTMETMEGDGDQQ 120

Query: 121 KASNGLSRTMFEEMKEAPLLSPLRLAWLGFGPASDEEDN-LLLPGYF 162
              +G S TMFE++KE PLLSPLRL  LGFGPA +EED  LLLP YF
Sbjct: 121 GTRSGWSSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPLLLLPTYF 163

[Close]

BLAST of Carg27048 vs. TrEMBL
Match: tr|A0A1S3CAB8|A0A1S3CAB8_CUCME (ethylene-responsive transcription factor ERF022-like OS=Cucumis melo OX=3656 GN=LOC103498753 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 7.4e-56
Identity = 121/165 (73.33%), Postives = 135/165 (81.82%), Query Frame = 0


Query: 1   MTKTQPQLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60
           MT+ Q Q     L +N S++ PFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR
Sbjct: 1   MTQAQQQ----HLRANGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60

Query: 61  AYDSAAVFLRGTSALLNFPDSVGSLPQPESCSREHIQLAAAKAAAQMREMEV---GERKA 120
           AYDSAA FLRG SA+LNFPDSV SLPQPESCSREHIQLAAAKAAAQ+R   V    +++ 
Sbjct: 61  AYDSAAAFLRGNSAVLNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTETVEGGDQQRT 120

Query: 121 SNGLSRTMFEEMKEAPLLSPLRLAWLGFGPASDEED-NLLLPGYF 162
            +G S TMFE++KE PLLSPLRL  LGFGPA +EED +LLLP YF
Sbjct: 121 RSGWSSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPSLLLPTYF 161

[Close]

BLAST of Carg27048 vs. TrEMBL
Match: tr|A9PL84|A9PL84_POPTR (TINY-like protein OS=Populus trichocarpa OX=3694 GN=TINYL15 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.2e-35
Identity = 87/136 (63.97%), Postives = 96/136 (70.59%), Query Frame = 0


Query: 21  SPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPD 80
           +PF GVRKRSWGRYVSEIRLPGKKTRVWLGSF SPEMAARA+DSAA FL+G SA LNFPD
Sbjct: 34  APFHGVRKRSWGRYVSEIRLPGKKTRVWLGSFGSPEMAARAHDSAAFFLKGNSACLNFPD 93

Query: 81  SVGSLPQPESCSREHIQLAAAKAAAQMREMEVG-----ERKASNG------------LSR 140
           SVGSLP+P+SCS + IQLAAAKAA    E  VG     E   S G            +  
Sbjct: 94  SVGSLPRPKSCSSKDIQLAAAKAATGFDESRVGNGVGFEDCESGGEPDGSIWLGLGEIET 153

[Close]

BLAST of Carg27048 vs. TrEMBL
Match: tr|A0A2K1WQR6|A0A2K1WQR6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G067400v3 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.2e-35
Identity = 87/136 (63.97%), Postives = 96/136 (70.59%), Query Frame = 0


Query: 21  SPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPD 80
           +PF GVRKRSWGRYVSEIRLPGKKTRVWLGSF SPEMAARA+DSAA FL+G SA LNFPD
Sbjct: 34  APFHGVRKRSWGRYVSEIRLPGKKTRVWLGSFGSPEMAARAHDSAAFFLKGNSACLNFPD 93

Query: 81  SVGSLPQPESCSREHIQLAAAKAAAQMREMEVG-----ERKASNG------------LSR 140
           SVGSLP+P+SCS + IQLAAAKAA    E  VG     E   S G            +  
Sbjct: 94  SVGSLPRPKSCSSKDIQLAAAKAATGFDETRVGNVVGFEDCESGGEPDSSIWLGLGEIET 153

[Close]

BLAST of Carg27048 vs. TrEMBL
Match: tr|A9PL85|A9PL85_POPTR (TINY-like protein OS=Populus trichocarpa OX=3694 GN=TINYL16 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.2e-35
Identity = 87/136 (63.97%), Postives = 96/136 (70.59%), Query Frame = 0


Query: 21  SPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPD 80
           +PF GVRKRSWGRYVSEIRLPGKKTRVWLGSF SPEMAARA+DSAA FL+G SA LNFPD
Sbjct: 34  APFHGVRKRSWGRYVSEIRLPGKKTRVWLGSFGSPEMAARAHDSAAFFLKGNSACLNFPD 93

Query: 81  SVGSLPQPESCSREHIQLAAAKAAAQMREMEVG-----ERKASNG------------LSR 140
           SVGSLP+P+SCS + IQLAAAKAA    E  VG     E   S G            +  
Sbjct: 94  SVGSLPRPKSCSSKDIQLAAAKAATGFDESRVGNGVGFEDCESGGEPDSSIWLGLGEIET 153

The following BLAST results are available for this feature:

BLAST of Carg27048 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930134.1	4.8e-83	98.76	ethylene-responsive transcription factor ERF022-like [Cucurbita moschata]	[more]
XP_023536389.1	2.4e-82	98.14	ethylene-responsive transcription factor ERF022-like [Cucurbita pepo subsp. pepo...	[more]
XP_022974052.1	1.8e-77	93.17	ethylene-responsive transcription factor ERF022-like [Cucurbita maxima]	[more]
XP_004141611.1	1.2e-57	74.85	PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis sativus...	[more]
XP_008459710.1	1.1e-55	73.33	PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis melo]	[more]

BLAST of Carg27048 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G33760.1	1.8e-28	47.83	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	4.3e-25	64.63	Integrase-type DNA-binding superfamily protein	[more]
AT1G01250.1	6.1e-24	55.43	Integrase-type DNA-binding superfamily protein	[more]
AT5G11590.1	1.5e-22	59.76	Integrase-type DNA-binding superfamily protein	[more]
AT1G71450.1	2.0e-22	42.38	Integrase-type DNA-binding superfamily protein	[more]

BLAST of Carg27048 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LQ28\|ERF22_ARATH	3.3e-27	47.83	Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q39127\|TINY_ARATH	7.7e-24	64.63	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q1ECI2\|ERF23_ARATH	1.1e-22	55.43	Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9LYD3\|DREB3_ARATH	2.7e-21	59.76	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q9C9I2\|ERF21_ARATH	3.6e-21	42.38	Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Carg27048 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KSQ8\|A0A0A0KSQ8_CUCSA	7.9e-58	74.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647260 PE=4 SV=1	[more]
tr\|A0A1S3CAB8\|A0A1S3CAB8_CUCME	7.4e-56	73.33	ethylene-responsive transcription factor ERF022-like OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A9PL84\|A9PL84_POPTR	4.2e-35	63.97	TINY-like protein OS=Populus trichocarpa OX=3694 GN=TINYL15 PE=4 SV=1	[more]
tr\|A0A2K1WQR6\|A0A2K1WQR6_POPTR	4.2e-35	63.97	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G067400v3 PE=...	[more]
tr\|A9PL85\|A9PL85_POPTR	4.2e-35	63.97	TINY-like protein OS=Populus trichocarpa OX=3694 GN=TINYL16 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR017392	AP2/ERF-transcript_factor
IPR036955	AP2/ERF_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27048-RA	Carg27048-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 23..34 score: 57.42 coord: 61..81 score: 56.19
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 22..85 e-value: 5.4E-33 score: 125.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 23..71 e-value: 9.3E-10 score: 38.5
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 22..79 score: 20.929
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 23..81 e-value: 1.60041E-28 score: 100.809
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 22..82 e-value: 2.2E-26 score: 93.4
IPR017392	AP2/ERF transcription factor ERF/PTI6	PIRSF	PIRSF038123	PTI6	coord: 13..119 e-value: 8.0E-18 score: 62.9
None	No IPR available	PANTHER	PTHR31985	FAMILY NOT NAMED	coord: 18..121
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 22..81

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27048	Cla012379	Watermelon (97103) v1	carwmB0028
Carg27048	Csa5G647260	Cucumber (Chinese Long) v2	carcuB0024
Carg27048	MELO3C022119	Melon (DHL92) v3.5.1	carmeB0026
Carg27048	ClCG08G001830	Watermelon (Charleston Gray)	carwcgB0027
Carg27048	CSPI05G30310	Wild cucumber (PI 183967)	carcpiB0025
Carg27048	Cucsa.237800	Cucumber (Gy14) v1	carcgyB0027
Carg27048	CmaCh09G012040	Cucurbita maxima (Rimu)	carcmaB0036
Carg27048	CmoCh09G012040	Cucurbita moschata (Rifu)	carcmoB0036
Carg27048	Lsi08G001810	Bottle gourd (USVL1VR-Ls)	carlsiB023
Carg27048	CsGy5G029710	Cucumber (Gy14) v2	carcgybB0024
Carg27048	MELO3C022119.2	Melon (DHL92) v3.6.1	carmedB0027
Carg27048	CsaV3_5G039410	Cucumber (Chinese Long) v3	carcucB0025
Carg27048	Cla97C08G145930	Watermelon (97103) v2	carwmbB0023
Carg27048	Bhi06G000119	Wax gourd	carwgoB0029

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None