CmoCh09G012040 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh09G012040
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(Dehydration responsive element binding transcription factor) (Ethylene-responsive transcription factor)
Location	Cmo_Chr09 : 9111892 .. 9112377 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTAAAACTCAACCACAACTTATCGAACGTCGACTCGGATCTAATGTTTCAGTTTCAAGTCCCTTTCGAGGAGTACGGAAGCGGAGTTGGGGTCGCTATGTATCTGAGATACGGTTACCAGGGAAGAAGACACGAGTGTGGCTTGGCTCATTCGCCTCTCCAGAGATGGCCGCACGAGCCTACGACTCGGCAGCTGTATTTTTGAGAGGCACCTCTGCCTTGCTCAACTTTCCTGACTCTATCGGCTCGCTCCCACAACCAGAGTCATGCTCAAGAGAACATATTCAATCGGCAGCGGCAAAGGCAGCAGCGCAAATGAGAGAAATGGAGGTTGGAGAGCGAAAGGCGAGCAACGGATTGAGTCGAACCATGTTTGAGGAGATGAAGGAAGCACCATTGTTGAGTCCATTGAGGTTGGCTTGGCTTGGGTTTGGACCAGCCTCGGACGAAGAAGACAATTTGTTATTACCAGGCTATTTCTAA

mRNA sequence

ATGACTAAAACTCAACCACAACTTATCGAACGTCGACTCGGATCTAATGTTTCAGTTTCAAGTCCCTTTCGAGGAGTACGGAAGCGGAGTTGGGGTCGCTATGTATCTGAGATACGGTTACCAGGGAAGAAGACACGAGTGTGGCTTGGCTCATTCGCCTCTCCAGAGATGGCCGCACGAGCCTACGACTCGGCAGCTGTATTTTTGAGAGGCACCTCTGCCTTGCTCAACTTTCCTGACTCTATCGGCTCGCTCCCACAACCAGAGTCATGCTCAAGAGAACATATTCAATCGGCAGCGGCAAAGGCAGCAGCGCAAATGAGAGAAATGGAGGTTGGAGAGCGAAAGGCGAGCAACGGATTGAGTCGAACCATGTTTGAGGAGATGAAGGAAGCACCATTGTTGAGTCCATTGAGGTTGGCTTGGCTTGGGTTTGGACCAGCCTCGGACGAAGAAGACAATTTGTTATTACCAGGCTATTTCTAA

Coding sequence (CDS)

ATGACTAAAACTCAACCACAACTTATCGAACGTCGACTCGGATCTAATGTTTCAGTTTCAAGTCCCTTTCGAGGAGTACGGAAGCGGAGTTGGGGTCGCTATGTATCTGAGATACGGTTACCAGGGAAGAAGACACGAGTGTGGCTTGGCTCATTCGCCTCTCCAGAGATGGCCGCACGAGCCTACGACTCGGCAGCTGTATTTTTGAGAGGCACCTCTGCCTTGCTCAACTTTCCTGACTCTATCGGCTCGCTCCCACAACCAGAGTCATGCTCAAGAGAACATATTCAATCGGCAGCGGCAAAGGCAGCAGCGCAAATGAGAGAAATGGAGGTTGGAGAGCGAAAGGCGAGCAACGGATTGAGTCGAACCATGTTTGAGGAGATGAAGGAAGCACCATTGTTGAGTCCATTGAGGTTGGCTTGGCTTGGGTTTGGACCAGCCTCGGACGAAGAAGACAATTTGTTATTACCAGGCTATTTCTAA

Homology

[Close]

BLAST of CmoCh09G012040 vs. Swiss-Prot
Match: ERF22_ARATH (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF022 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.3e-27
Identity = 65/138 (47.10%), Postives = 90/138 (65.22%), Query Frame = 1


Query: 23  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSI 82
           +RG+R+R WG++VSEIR PGKKTR+WLGS+ + EMAA AYD+AA+ LRG    LNFP+ +
Sbjct: 20  YRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPELV 79

Query: 83  GSLPQPESCSREHIQSAAAKAAAQMR-------EMEVGERKASNGLSRTMFEEMKEAPLL 142
            S P+PES S EHIQ+AA  AA   +        +E G+  +  GLS    + + E+PL 
Sbjct: 80  DSFPRPESSSSEHIQAAAQDAALMFKPGRLSEPALESGQGLSRVGLSPDQIQAINESPLD 139

Query: 143 SPLRLAWLGFGPASDEED 154
           SP R+ W+     +D E+
Sbjct: 140 SP-RMGWMQDLEVADYEE 156

[Close]

BLAST of CmoCh09G012040 vs. Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.8e-23
Identity = 53/82 (64.63%), Postives = 66/82 (80.49%), Query Frame = 1


Query: 23  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSI 82
           +RGVRKR+WG++VSEIR P KK+R+WLG+F SPEMAARA+D AA+ ++G SA+LNFPD  
Sbjct: 36  YRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLA 95

Query: 83  GSLPQPESCSREHIQSAAAKAA 105
           GS P+P S S   IQ AA KAA
Sbjct: 96  GSFPRPSSLSPRDIQVAALKAA 117

[Close]

BLAST of CmoCh09G012040 vs. Swiss-Prot
Match: ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.2e-22
Identity = 52/92 (56.52%), Postives = 69/92 (75.00%), Query Frame = 1


Query: 23  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSI 82
           + GVRKR WG++VSEIR P KK+R+WLGSF  PEMAA+AYD AA  L+G  A LNFP+ I
Sbjct: 45  YHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEEI 104

Query: 83  GSLPQPESCSREHIQSAAAKAAAQMREMEVGE 115
             LP+P +C+   IQ AAAKAA  ++ +++G+
Sbjct: 105 EDLPRPSTCTPRDIQVAAAKAANAVKIIKMGD 136

[Close]

BLAST of CmoCh09G012040 vs. Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.1e-22
Identity = 50/83 (60.24%), Postives = 69/83 (83.13%), Query Frame = 1


Query: 23  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSI 82
           +RGVR R+WG++VSEIR P KK+R+WLG+F++PEMAARA+D+AA+ ++GTSA+LNFP+  
Sbjct: 43  YRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELA 102

Query: 83  GSLPQPESCSREHIQSAAAKAAA 106
             LP+P S S   +Q+AAA AAA
Sbjct: 103 TYLPRPASSSPRDVQAAAAVAAA 125

[Close]

BLAST of CmoCh09G012040 vs. Swiss-Prot
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF036 PE=2 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-21
Identity = 57/110 (51.82%), Postives = 79/110 (71.82%), Query Frame = 1


Query: 11  RRLGSNVSVSSP-----FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSA 70
           RR  S+ S SS      +RGVR RSWG++VSEIR P KKTR+WLG+F + +MAARA+D A
Sbjct: 44  RRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVA 103

Query: 71  AVFLRGTSALLNFPDSIGSLPQPESCSREHIQSAAAKAAAQMREMEVGER 116
           A+ ++G+SA+LNFP+     P+P S S   IQ+AAA+AAA + E ++ E+
Sbjct: 104 ALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEEKLLEK 153

[Close]

BLAST of CmoCh09G012040 vs. TrEMBL
Match: A0A0A0KSQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G647260 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 4.7e-57
Identity = 123/167 (73.65%), Postives = 136/167 (81.44%), Query Frame = 1


Query: 1   MTKTQPQLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60
           MT+ QP    R LG++ S++ PFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR
Sbjct: 1   MTQAQP----RHLGASGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60

Query: 61  AYDSAAVFLRGTSALLNFPDSIGSLPQPESCSREHIQSAAAKAAAQMREMEVGE-----R 120
           AYDSAA FLRGTSA+LNFPDS+ SLPQPESCSREHIQ AAAKAAAQ+R ME  E     +
Sbjct: 61  AYDSAAAFLRGTSAILNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTMETMEGDGDQQ 120

Query: 121 KASNGLSRTMFEEMKEAPLLSPLRLAWLGFGPASDEEDN-LLLPGYF 162
              +G S TMFE++KE PLLSPLRL  LGFGPA +EED  LLLP YF
Sbjct: 121 GTRSGWSSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPLLLLPTYF 163

[Close]

BLAST of CmoCh09G012040 vs. TrEMBL
Match: U5FIC5_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0019s09530g PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.3e-34
Identity = 85/136 (62.50%), Postives = 95/136 (69.85%), Query Frame = 1


Query: 21  SPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPD 80
           +PF GVRKRSWGRYVSEIRLPGKKTRVWLGSF SPEMAARA+DSAA FL+G SA LNFPD
Sbjct: 74  APFHGVRKRSWGRYVSEIRLPGKKTRVWLGSFGSPEMAARAHDSAAFFLKGNSACLNFPD 133

Query: 81  SIGSLPQPESCSREHIQSAAAKAAAQMREMEVG-----ERKASNG------------LSR 140
           S+GSLP+P+SCS + IQ AAAKAA    E  VG     E   S G            +  
Sbjct: 134 SVGSLPRPKSCSSKDIQLAAAKAATGFDETRVGNVVGFEDCESGGEPDSSIWLGLGEIET 193

[Close]

BLAST of CmoCh09G012040 vs. TrEMBL
Match: A9PL84_POPTR (TINY-like protein OS=Populus trichocarpa GN=TINYL15 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.3e-34
Identity = 85/136 (62.50%), Postives = 95/136 (69.85%), Query Frame = 1


Query: 21  SPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPD 80
           +PF GVRKRSWGRYVSEIRLPGKKTRVWLGSF SPEMAARA+DSAA FL+G SA LNFPD
Sbjct: 34  APFHGVRKRSWGRYVSEIRLPGKKTRVWLGSFGSPEMAARAHDSAAFFLKGNSACLNFPD 93

Query: 81  SIGSLPQPESCSREHIQSAAAKAAAQMREMEVG-----ERKASNG------------LSR 140
           S+GSLP+P+SCS + IQ AAAKAA    E  VG     E   S G            +  
Sbjct: 94  SVGSLPRPKSCSSKDIQLAAAKAATGFDESRVGNGVGFEDCESGGEPDGSIWLGLGEIET 153

[Close]

BLAST of CmoCh09G012040 vs. TrEMBL
Match: A9PL85_POPTR (TINY-like protein OS=Populus trichocarpa GN=TINYL16 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.3e-34
Identity = 85/136 (62.50%), Postives = 95/136 (69.85%), Query Frame = 1


Query: 21  SPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPD 80
           +PF GVRKRSWGRYVSEIRLPGKKTRVWLGSF SPEMAARA+DSAA FL+G SA LNFPD
Sbjct: 34  APFHGVRKRSWGRYVSEIRLPGKKTRVWLGSFGSPEMAARAHDSAAFFLKGNSACLNFPD 93

Query: 81  SIGSLPQPESCSREHIQSAAAKAAAQMREMEVG-----ERKASNG------------LSR 140
           S+GSLP+P+SCS + IQ AAAKAA    E  VG     E   S G            +  
Sbjct: 94  SVGSLPRPKSCSSKDIQLAAAKAATGFDESRVGNGVGFEDCESGGEPDSSIWLGLGEIET 153

[Close]

BLAST of CmoCh09G012040 vs. TrEMBL
Match: K7LFN0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G233800 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.6e-34
Identity = 90/170 (52.94%), Postives = 111/170 (65.29%), Query Frame = 1


Query: 2   TKTQPQLIERRL-------GSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFAS 61
           T+ +PQL+ R L        +     S FRGVRKRSWGRYVSEIRLPG+KTR+WLGSF S
Sbjct: 25  TRLKPQLLIRVLLMCSISEKAKRKRQSAFRGVRKRSWGRYVSEIRLPGQKTRIWLGSFGS 84

Query: 62  PEMAARAYDSAAVFLRGTSALLNFPDSIGSLPQPESCSREHIQSAAAKAAAQMREMEVGE 121
           PEMAARAYDSAA FL+GTSA LNFPD + SLP+P S SR  IQSAAA+AA      +  +
Sbjct: 85  PEMAARAYDSAAFFLKGTSATLNFPDLVHSLPRPLSSSRRDIQSAAAEAALHSPPPKEEQ 144

Query: 122 RKASNGLSRTMFEEMKEAPLLSPLRLAWLGFGPAS-----DEEDNLLLPG 160
                  + + F ++ EAPL+SPLR+    FG  S     D  D++L+ G
Sbjct: 145 ESIFTSTTTSSFHDVMEAPLMSPLRVD-STFGDFSWDQLFDFNDDILIVG 193

[Close]

BLAST of CmoCh09G012040 vs. TAIR10
Match: AT1G33760.1 (AT1G33760.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 122.5 bits (306), Expect = 2.4e-28
Identity = 65/138 (47.10%), Postives = 90/138 (65.22%), Query Frame = 1


Query: 23  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSI 82
           +RG+R+R WG++VSEIR PGKKTR+WLGS+ + EMAA AYD+AA+ LRG    LNFP+ +
Sbjct: 20  YRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPELV 79

Query: 83  GSLPQPESCSREHIQSAAAKAAAQMR-------EMEVGERKASNGLSRTMFEEMKEAPLL 142
            S P+PES S EHIQ+AA  AA   +        +E G+  +  GLS    + + E+PL 
Sbjct: 80  DSFPRPESSSSEHIQAAAQDAALMFKPGRLSEPALESGQGLSRVGLSPDQIQAINESPLD 139

Query: 143 SPLRLAWLGFGPASDEED 154
           SP R+ W+     +D E+
Sbjct: 140 SP-RMGWMQDLEVADYEE 156

[Close]

BLAST of CmoCh09G012040 vs. TAIR10
Match: AT5G25810.1 (AT5G25810.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 2.1e-24
Identity = 53/82 (64.63%), Postives = 66/82 (80.49%), Query Frame = 1


Query: 23  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSI 82
           +RGVRKR+WG++VSEIR P KK+R+WLG+F SPEMAARA+D AA+ ++G SA+LNFPD  
Sbjct: 36  YRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLA 95

Query: 83  GSLPQPESCSREHIQSAAAKAA 105
           GS P+P S S   IQ AA KAA
Sbjct: 96  GSFPRPSSLSPRDIQVAALKAA 117

[Close]

BLAST of CmoCh09G012040 vs. TAIR10
Match: AT1G01250.1 (AT1G01250.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 1.8e-23
Identity = 52/92 (56.52%), Postives = 69/92 (75.00%), Query Frame = 1


Query: 23  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSI 82
           + GVRKR WG++VSEIR P KK+R+WLGSF  PEMAA+AYD AA  L+G  A LNFP+ I
Sbjct: 45  YHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEEI 104

Query: 83  GSLPQPESCSREHIQSAAAKAAAQMREMEVGE 115
             LP+P +C+   IQ AAAKAA  ++ +++G+
Sbjct: 105 EDLPRPSTCTPRDIQVAAAKAANAVKIIKMGD 136

[Close]

BLAST of CmoCh09G012040 vs. TAIR10
Match: AT1G77200.1 (AT1G77200.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 4.0e-23
Identity = 50/83 (60.24%), Postives = 69/83 (83.13%), Query Frame = 1


Query: 23  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPDSI 82
           +RGVR R+WG++VSEIR P KK+R+WLG+F++PEMAARA+D+AA+ ++GTSA+LNFP+  
Sbjct: 43  YRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELA 102

Query: 83  GSLPQPESCSREHIQSAAAKAAA 106
             LP+P S S   +Q+AAA AAA
Sbjct: 103 TYLPRPASSSPRDVQAAAAVAAA 125

[Close]

BLAST of CmoCh09G012040 vs. TAIR10
Match: AT3G16280.1 (AT3G16280.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 104.4 bits (259), Expect = 6.8e-23
Identity = 57/110 (51.82%), Postives = 79/110 (71.82%), Query Frame = 1


Query: 11  RRLGSNVSVSSP-----FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSA 70
           RR  S+ S SS      +RGVR RSWG++VSEIR P KKTR+WLG+F + +MAARA+D A
Sbjct: 44  RRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVA 103

Query: 71  AVFLRGTSALLNFPDSIGSLPQPESCSREHIQSAAAKAAAQMREMEVGER 116
           A+ ++G+SA+LNFP+     P+P S S   IQ+AAA+AAA + E ++ E+
Sbjct: 104 ALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEEKLLEK 153

[Close]

BLAST of CmoCh09G012040 vs. NCBI nr
Match: gi|449447711|ref|XP_004141611.1| (PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis sativus])

HSP 1 Score: 228.8 bits (582), Expect = 6.8e-57
Identity = 123/167 (73.65%), Postives = 136/167 (81.44%), Query Frame = 1


Query: 1   MTKTQPQLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60
           MT+ QP    R LG++ S++ PFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR
Sbjct: 1   MTQAQP----RHLGASGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60

Query: 61  AYDSAAVFLRGTSALLNFPDSIGSLPQPESCSREHIQSAAAKAAAQMREMEVGE-----R 120
           AYDSAA FLRGTSA+LNFPDS+ SLPQPESCSREHIQ AAAKAAAQ+R ME  E     +
Sbjct: 61  AYDSAAAFLRGTSAILNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTMETMEGDGDQQ 120

Query: 121 KASNGLSRTMFEEMKEAPLLSPLRLAWLGFGPASDEEDN-LLLPGYF 162
              +G S TMFE++KE PLLSPLRL  LGFGPA +EED  LLLP YF
Sbjct: 121 GTRSGWSSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPLLLLPTYF 163

[Close]

BLAST of CmoCh09G012040 vs. NCBI nr
Match: gi|659119539|ref|XP_008459710.1| (PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis melo])

HSP 1 Score: 221.9 bits (564), Expect = 8.3e-55
Identity = 119/165 (72.12%), Postives = 134/165 (81.21%), Query Frame = 1


Query: 1   MTKTQPQLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60
           MT+ Q Q     L +N S++ PFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR
Sbjct: 1   MTQAQQQ----HLRANGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAAR 60

Query: 61  AYDSAAVFLRGTSALLNFPDSIGSLPQPESCSREHIQSAAAKAAAQMREMEV---GERKA 120
           AYDSAA FLRG SA+LNFPDS+ SLPQPESCSREHIQ AAAKAAAQ+R   V    +++ 
Sbjct: 61  AYDSAAAFLRGNSAVLNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTETVEGGDQQRT 120

Query: 121 SNGLSRTMFEEMKEAPLLSPLRLAWLGFGPASDEED-NLLLPGYF 162
            +G S TMFE++KE PLLSPLRL  LGFGPA +EED +LLLP YF
Sbjct: 121 RSGWSSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPSLLLPTYF 161

[Close]

BLAST of CmoCh09G012040 vs. NCBI nr
Match: gi|1009178830|ref|XP_015870745.1| (PREDICTED: ethylene-responsive transcription factor ERF039-like [Ziziphus jujuba])

HSP 1 Score: 156.8 bits (395), Expect = 3.3e-35
Identity = 90/165 (54.55%), Postives = 106/165 (64.24%), Query Frame = 1


Query: 2   TKTQPQLIERRLGSNVSVSS--------PFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFA 61
           TKT  Q + +R  ++ + ++        PFRGVRKRSWGRYVSEIRLPGKKTRVWLGSF 
Sbjct: 14  TKTHSQSLSKRASNSTTTTTTAARQHDTPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFG 73

Query: 62  SPEMAARAYDSAAVFLRGTSALLNFPDSIGSLPQPESCSREHIQSAAAKAAAQMREMEVG 121
           SPEMAARAYDSAA +L+G SA LNFPD   SLP+PES SR  IQSAAAKAA Q +E    
Sbjct: 74  SPEMAARAYDSAAFYLKGNSASLNFPDLAESLPRPESSSRRDIQSAAAKAALQPKESRSI 133

Query: 122 ERKASNGLSRTM-------------------FEEMKEAPLLSPLR 140
              +   +SR +                   F+E+KEAPLLSP R
Sbjct: 134 VNSSRESVSRELTDLSTEYWWGLDFEGGTVSFDEVKEAPLLSPFR 178

[Close]

BLAST of CmoCh09G012040 vs. NCBI nr
Match: gi|566256005|ref|XP_006388007.1| (hypothetical protein POPTR_0409s00200g [Populus trichocarpa])

HSP 1 Score: 152.9 bits (385), Expect = 4.7e-34
Identity = 85/136 (62.50%), Postives = 95/136 (69.85%), Query Frame = 1


Query: 21  SPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPD 80
           +PF GVRKRSWGRYVSEIRLPGKKTRVWLGSF SPEMAARA+DSAA FL+G SA LNFPD
Sbjct: 34  APFHGVRKRSWGRYVSEIRLPGKKTRVWLGSFGSPEMAARAHDSAAFFLKGNSACLNFPD 93

Query: 81  SIGSLPQPESCSREHIQSAAAKAAAQMREMEVG-----ERKASNG------------LSR 140
           S+GSLP+P+SCS + IQ AAAKAA    E  VG     E   S G            +  
Sbjct: 94  SVGSLPRPKSCSSKDIQLAAAKAATGFDESRVGNGVGFEDCESGGEPDGSIWLGLGEIET 153

[Close]

BLAST of CmoCh09G012040 vs. NCBI nr
Match: gi|566238626|ref|XP_006371370.1| (hypothetical protein POPTR_0019s09530g, partial [Populus trichocarpa])

HSP 1 Score: 152.9 bits (385), Expect = 4.7e-34
Identity = 85/136 (62.50%), Postives = 95/136 (69.85%), Query Frame = 1


Query: 21  SPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAVFLRGTSALLNFPD 80
           +PF GVRKRSWGRYVSEIRLPGKKTRVWLGSF SPEMAARA+DSAA FL+G SA LNFPD
Sbjct: 74  APFHGVRKRSWGRYVSEIRLPGKKTRVWLGSFGSPEMAARAHDSAAFFLKGNSACLNFPD 133

Query: 81  SIGSLPQPESCSREHIQSAAAKAAAQMREMEVG-----ERKASNG------------LSR 140
           S+GSLP+P+SCS + IQ AAAKAA    E  VG     E   S G            +  
Sbjct: 134 SVGSLPRPKSCSSKDIQLAAAKAATGFDETRVGNVVGFEDCESGGEPDSSIWLGLGEIET 193

The following BLAST results are available for this feature:

BLAST of CmoCh09G012040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF22_ARATH	4.3e-27	47.10	Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF02...	[more]
TINY_ARATH	3.8e-23	64.63	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE...	[more]
ERF23_ARATH	3.2e-22	56.52	Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF02...	[more]
ERF37_ARATH	7.1e-22	60.24	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF03...	[more]
ERF36_ARATH	1.2e-21	51.82	Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF03...	[more]

BLAST of CmoCh09G012040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSQ8_CUCSA	4.7e-57	73.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G647260 PE=4 SV=1	[more]
U5FIC5_POPTR	3.3e-34	62.50	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0019s09530g P...	[more]
A9PL84_POPTR	3.3e-34	62.50	TINY-like protein OS=Populus trichocarpa GN=TINYL15 PE=4 SV=1	[more]
A9PL85_POPTR	3.3e-34	62.50	TINY-like protein OS=Populus trichocarpa GN=TINYL16 PE=4 SV=1	[more]
K7LFN0_SOYBN	5.6e-34	52.94	Uncharacterized protein OS=Glycine max GN=GLYMA_09G233800 PE=4 SV=1	[more]

BLAST of CmoCh09G012040 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G33760.1	2.4e-28	47.10	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	2.1e-24	64.63	Integrase-type DNA-binding superfamily protein	[more]
AT1G01250.1	1.8e-23	56.52	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	4.0e-23	60.24	Integrase-type DNA-binding superfamily protein	[more]
AT3G16280.1	6.8e-23	51.82	Integrase-type DNA-binding superfamily protein	[more]

BLAST of CmoCh09G012040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447711\|ref\|XP_004141611.1\|	6.8e-57	73.65	PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis sativus...	[more]
gi\|659119539\|ref\|XP_008459710.1\|	8.3e-55	72.12	PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis melo]	[more]
gi\|1009178830\|ref\|XP_015870745.1\|	3.3e-35	54.55	PREDICTED: ethylene-responsive transcription factor ERF039-like [Ziziphus jujuba...	[more]
gi\|566256005\|ref\|XP_006388007.1\|	4.7e-34	62.50	hypothetical protein POPTR_0409s00200g [Populus trichocarpa]	[more]
gi\|566238626\|ref\|XP_006371370.1\|	4.7e-34	62.50	hypothetical protein POPTR_0019s09530g, partial [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G012040.1	CmoCh09G012040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 23..34 score: 1.3E-11coord: 61..81 score: 1.3
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 23..81 score: 7.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 23..71 score: 6.0
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 22..85 score: 4.0
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 22..79 score: 20
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 22..81 score: 6.54
None	No IPR available	PANTHER	PTHR31985	FAMILY NOT NAMED	coord: 7..133 score: 2.2
None	No IPR available	PANTHER	PTHR31985:SF26	SUBFAMILY NOT NAMED	coord: 7..133 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh09G012040	Cucsa.237800	Cucumber (Gy14) v1	cgycmoB0659
CmoCh09G012040	CmaCh09G012040	Cucurbita maxima (Rimu)	cmacmoB030
CmoCh09G012040	Cla012379	Watermelon (97103) v1	cmowmB012
CmoCh09G012040	Csa5G647260	Cucumber (Chinese Long) v2	cmocuB021
CmoCh09G012040	MELO3C022119	Melon (DHL92) v3.5.1	cmomeB001
CmoCh09G012040	ClCG08G001830	Watermelon (Charleston Gray)	cmowcgB028
CmoCh09G012040	CSPI05G30310	Wild cucumber (PI 183967)	cmocpiB021
CmoCh09G012040	Lsi08G001810	Bottle gourd (USVL1VR-Ls)	cmolsiB026
CmoCh09G012040	MELO3C022119.2	Melon (DHL92) v3.6.1	cmomedB001
CmoCh09G012040	CsaV3_5G039410	Cucumber (Chinese Long) v3	cmocucB0025
CmoCh09G012040	Cla97C08G145930	Watermelon (97103) v2	cmowmbB029
CmoCh09G012040	Bhi06G000119	Wax gourd	cmowgoB0002
CmoCh09G012040	CsGy5G029710	Cucumber (Gy14) v2	cgybcmoB552
CmoCh09G012040	Carg27048	Silver-seed gourd	carcmoB0036

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh09G012040	Cucurbita moschata (Rifu)	cmocmoB024
CmoCh09G012040	Cucurbita maxima (Rimu)	cmacmoB027
CmoCh09G012040	Cucurbita maxima (Rimu)	cmacmoB441
CmoCh09G012040	Cucurbita pepo (Zucchini)	cmocpeB021
CmoCh09G012040	Cucurbita pepo (Zucchini)	cmocpeB035
CmoCh09G012040	Bottle gourd (USVL1VR-Ls)	cmolsiB022