Cla012379 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla012379
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Ethylene-responsive transcription factor 12 (AHRD V1 -* ERF81_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding
Location	Chr8 : 2621549 .. 2622019 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACAAGCTCAATCGCGACGTCTCAGAGTTAACGATTCGGTATCGAAGACCTTTCGAGGGGTTCGAAAGCGGAGTTGGGGTCGCTATGTCTCGGAGATACGGCTACCGGGGAAGAAAACGCGTGTATGGCTTGGCTCCTTCGCCTCCCCCGAGATGGCGGCTCGTGCCTATGACTCGGCAGCGGCATTTTTGAGAGGCACCTCCGCCGTGCTCAACTTCCCCGATTCTGTGAGCTCACTCCCACAGCCGGAGTCGTGCTCGAGAGAACACATTCAATCGGCAGCGGCAAAGGCAGCAGCGCAAATGCGAGAGATGGAAACTGAAGAGCGAGAGACAAGCAGTGGATGGAGTCCGACAACGTTCGAGCAGGTGAAGGAAGCGCCATTGTTGAGTCCATTGAGGTTGGGGCTTCTTGGCTTTGGACCAGCCTCAGATGAAGACACTTTGTTGTTACCAGCCTATTTCTAA

mRNA sequence

ATGACACAAGCTCAATCGCGACGTCTCAGAGTTAACGATTCGGTATCGAAGACCTTTCGAGGGGTTCGAAAGCGGAGTTGGGGTCGCTATGTCTCGGAGATACGGCTACCGGGGAAGAAAACGCGTGTATGGCTTGGCTCCTTCGCCTCCCCCGAGATGGCGGCTCGTGCCTATGACTCGGCAGCGGCATTTTTGAGAGGCACCTCCGCCGTGCTCAACTTCCCCGATTCTGTGAGCTCACTCCCACAGCCGGAGTCGTGCTCGAGAGAACACATTCAATCGGCAGCGGCAAAGGCAGCAGCGCAAATGCGAGAGATGGAAACTGAAGAGCGAGAGACAAGCAGTGGATGGAGTCCGACAACGTTCGAGCAGGTGAAGGAAGCGCCATTGTTGAGTCCATTGAGGTTGGGGCTTCTTGGCTTTGGACCAGCCTCAGATGAAGACACTTTGTTGTTACCAGCCTATTTCTAA

Coding sequence (CDS)

ATGACACAAGCTCAATCGCGACGTCTCAGAGTTAACGATTCGGTATCGAAGACCTTTCGAGGGGTTCGAAAGCGGAGTTGGGGTCGCTATGTCTCGGAGATACGGCTACCGGGGAAGAAAACGCGTGTATGGCTTGGCTCCTTCGCCTCCCCCGAGATGGCGGCTCGTGCCTATGACTCGGCAGCGGCATTTTTGAGAGGCACCTCCGCCGTGCTCAACTTCCCCGATTCTGTGAGCTCACTCCCACAGCCGGAGTCGTGCTCGAGAGAACACATTCAATCGGCAGCGGCAAAGGCAGCAGCGCAAATGCGAGAGATGGAAACTGAAGAGCGAGAGACAAGCAGTGGATGGAGTCCGACAACGTTCGAGCAGGTGAAGGAAGCGCCATTGTTGAGTCCATTGAGGTTGGGGCTTCTTGGCTTTGGACCAGCCTCAGATGAAGACACTTTGTTGTTACCAGCCTATTTCTAA

Protein sequence

MTQAQSRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGWSPTTFEQVKEAPLLSPLRLGLLGFGPASDEDTLLLPAYF

Homology

[Close]

BLAST of Cla012379 vs. Swiss-Prot
Match: ERF22_ARATH (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF022 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.1e-27
Identity = 63/127 (49.61%), Postives = 83/127 (65.35%), Query Frame = 1


Query: 18  TFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDS 77
           ++RG+R+R WG++VSEIR PGKKTR+WLGS+ + EMAA AYD+AA  LRG    LNFP+ 
Sbjct: 19  SYRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPEL 78

Query: 78  VSSLPQPESCSREHIQSAAAKAAAQMR-------EMETEERETSSGWSPTTFEQVKEAPL 137
           V S P+PES S EHIQ+AA  AA   +        +E+ +  +  G SP   + + E+PL
Sbjct: 79  VDSFPRPESSSSEHIQAAAQDAALMFKPGRLSEPALESGQGLSRVGLSPDQIQAINESPL 138

[Close]

BLAST of Cla012379 vs. Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.9e-24
Identity = 62/116 (53.45%), Postives = 76/116 (65.52%), Query Frame = 1


Query: 19  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDSV 78
           +RGVRKR+WG++VSEIR P KK+R+WLG+F SPEMAARA+D AA  ++G SA+LNFPD  
Sbjct: 36  YRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLA 95

Query: 79  SSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGWSPTTFEQVKEAPLLSPL 135
            S P+P S S   IQ AA KAA     MET +  +SS  S  TF   + +  L  L
Sbjct: 96  GSFPRPSSLSPRDIQVAALKAA----HMETSQSFSSS--SSLTFSSSQSSSSLESL 145

[Close]

BLAST of Cla012379 vs. Swiss-Prot
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF036 PE=2 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 2.8e-23
Identity = 54/103 (52.43%), Postives = 74/103 (71.84%), Query Frame = 1


Query: 19  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDSV 78
           +RGVR RSWG++VSEIR P KKTR+WLG+F + +MAARA+D AA  ++G+SAVLNFP+  
Sbjct: 61  YRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELA 120

Query: 79  SSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGWSPTT 122
           S  P+P S S   IQ+AAA+AAA + E +  E++ +    P++
Sbjct: 121 SLFPRPASSSPHDIQTAAAEAAAMVVEEKLLEKDEAPEAPPSS 163

[Close]

BLAST of Cla012379 vs. Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.6e-23
Identity = 51/83 (61.45%), Postives = 67/83 (80.72%), Query Frame = 1


Query: 19  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDSV 78
           +RGVR R+WG++VSEIR P KK+R+WLG+F++PEMAARA+D+AA  ++GTSAVLNFP+  
Sbjct: 43  YRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELA 102

Query: 79  SSLPQPESCSREHIQSAAAKAAA 102
           + LP+P S S   +Q+AAA AAA
Sbjct: 103 TYLPRPASSSPRDVQAAAAVAAA 125

[Close]

BLAST of Cla012379 vs. Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 8.1e-23
Identity = 60/133 (45.11%), Postives = 83/133 (62.41%), Query Frame = 1


Query: 3   QAQSRRLRVNDSVSK-TFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSA 62
           Q++ +  R  DS     +RGVR R+WG++VSEIR P KK+R+WLG+F +PEMAARA+D A
Sbjct: 34  QSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVA 93

Query: 63  AAFLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGWSPTT 122
           A  ++GT+A+LNFP+   S P+P S S   IQ+AA K AA M    +    TSS  S ++
Sbjct: 94  ALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALK-AAHMEPTTSFSSSTSSSSSLSS 153

Query: 123 FEQVKEAPLLSPL 135
              ++   L+  L
Sbjct: 154 TSSLESLVLVMDL 165

[Close]

BLAST of Cla012379 vs. TrEMBL
Match: A0A0A0KSQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G647260 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.9e-63
Identity = 130/163 (79.75%), Postives = 140/163 (85.89%), Query Frame = 1


Query: 1   MTQAQSRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60
           MTQAQ R L  + S++K FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS
Sbjct: 1   MTQAQPRHLGASGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60

Query: 61  AAAFLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMET-----EERETSS 120
           AAAFLRGTSA+LNFPDSVSSLPQPESCSREHIQ AAAKAAAQ+R MET     +++ T S
Sbjct: 61  AAAFLRGTSAILNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTMETMEGDGDQQGTRS 120

Query: 121 GWSPTTFEQVKEAPLLSPLRLGLLGFGPASDED--TLLLPAYF 157
           GWS T FEQVKE PLLSPLRLGLLGFGPA +E+   LLLP YF
Sbjct: 121 GWSSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPLLLLPTYF 163

[Close]

BLAST of Cla012379 vs. TrEMBL
Match: A0A0S3SEW2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G268700 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.8e-38
Identity = 89/143 (62.24%), Postives = 100/143 (69.93%), Query Frame = 1


Query: 6   SRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFL 65
           SR+ R        FRGVRKRSWGRYVSEIRLPG+KTR+WLGSFASPEMAARAYDSAA FL
Sbjct: 12  SRKRRREAEAETAFRGVRKRSWGRYVSEIRLPGQKTRIWLGSFASPEMAARAYDSAAFFL 71

Query: 66  RGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGW-------- 125
           +GTSA LNFPD V SLP+P S SR  IQSAAA AA     + T+    SS W        
Sbjct: 72  KGTSATLNFPDLVHSLPRPLSSSRRDIQSAAATAALHPPSLGTDTNSNSSSWLDNLGDES 131

Query: 126 --SPTTFEQVKEAPLLSPLRLGL 139
             S  +FE VK+APL+SPLR+ L
Sbjct: 132 RISTMSFEDVKDAPLMSPLRVDL 154

[Close]

BLAST of Cla012379 vs. TrEMBL
Match: A0A0L9V8B8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g213800 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.8e-38
Identity = 89/143 (62.24%), Postives = 100/143 (69.93%), Query Frame = 1


Query: 6   SRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFL 65
           SR+ R        FRGVRKRSWGRYVSEIRLPG+KTR+WLGSFASPEMAARAYDSAA FL
Sbjct: 12  SRKRRREAEAETAFRGVRKRSWGRYVSEIRLPGQKTRIWLGSFASPEMAARAYDSAAFFL 71

Query: 66  RGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGW-------- 125
           +GTSA LNFPD V SLP+P S SR  IQSAAA AA     + T+    SS W        
Sbjct: 72  KGTSATLNFPDLVHSLPRPLSSSRRDIQSAAATAALHPPSLGTDTNSNSSSWLDNLGDES 131

Query: 126 --SPTTFEQVKEAPLLSPLRLGL 139
             S  +FE VK+APL+SPLR+ L
Sbjct: 132 RISTMSFEDVKDAPLMSPLRVDL 154

[Close]

BLAST of Cla012379 vs. TrEMBL
Match: A0A0B2PVR9_GLYSO (Dehydration-responsive element-binding protein 3 OS=Glycine soja GN=glysoja_006095 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.2e-35
Identity = 79/118 (66.95%), Postives = 92/118 (77.97%), Query Frame = 1


Query: 19  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDSV 78
           FRGVRKRSWGRYVSEIRLPG+KTR+WLGSF SPEMAARAYDSAA FL+GTSA LNFPD V
Sbjct: 16  FRGVRKRSWGRYVSEIRLPGQKTRIWLGSFGSPEMAARAYDSAAFFLKGTSATLNFPDLV 75

Query: 79  SSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGWSPTTFEQVKEAPLLSPLRL 137
            SLP+P S SR  IQSAAA+AA      + E+    +  + ++F  V EAPL+SPLR+
Sbjct: 76  HSLPRPLSSSRRDIQSAAAEAALHSPPPKEEQESIFTSTTTSSFHDVMEAPLMSPLRV 133

[Close]

BLAST of Cla012379 vs. TrEMBL
Match: K7LFN0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G233800 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.2e-35
Identity = 79/118 (66.95%), Postives = 92/118 (77.97%), Query Frame = 1


Query: 19  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDSV 78
           FRGVRKRSWGRYVSEIRLPG+KTR+WLGSF SPEMAARAYDSAA FL+GTSA LNFPD V
Sbjct: 53  FRGVRKRSWGRYVSEIRLPGQKTRIWLGSFGSPEMAARAYDSAAFFLKGTSATLNFPDLV 112

Query: 79  SSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGWSPTTFEQVKEAPLLSPLRL 137
            SLP+P S SR  IQSAAA+AA      + E+    +  + ++F  V EAPL+SPLR+
Sbjct: 113 HSLPRPLSSSRRDIQSAAAEAALHSPPPKEEQESIFTSTTTSSFHDVMEAPLMSPLRV 170

[Close]

BLAST of Cla012379 vs. NCBI nr
Match: gi|449447711|ref|XP_004141611.1| (PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis sativus])

HSP 1 Score: 250.0 bits (637), Expect = 2.8e-63
Identity = 130/163 (79.75%), Postives = 140/163 (85.89%), Query Frame = 1


Query: 1   MTQAQSRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60
           MTQAQ R L  + S++K FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS
Sbjct: 1   MTQAQPRHLGASGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60

Query: 61  AAAFLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMET-----EERETSS 120
           AAAFLRGTSA+LNFPDSVSSLPQPESCSREHIQ AAAKAAAQ+R MET     +++ T S
Sbjct: 61  AAAFLRGTSAILNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTMETMEGDGDQQGTRS 120

Query: 121 GWSPTTFEQVKEAPLLSPLRLGLLGFGPASDED--TLLLPAYF 157
           GWS T FEQVKE PLLSPLRLGLLGFGPA +E+   LLLP YF
Sbjct: 121 GWSSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPLLLLPTYF 163

[Close]

BLAST of Cla012379 vs. NCBI nr
Match: gi|659119539|ref|XP_008459710.1| (PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis melo])

HSP 1 Score: 248.4 bits (633), Expect = 8.0e-63
Identity = 129/161 (80.12%), Postives = 138/161 (85.71%), Query Frame = 1


Query: 1   MTQAQSRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60
           MTQAQ + LR N S++K FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS
Sbjct: 1   MTQAQQQHLRANGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60

Query: 61  AAAFLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMETE---ERETSSGW 120
           AAAFLRG SAVLNFPDSVSSLPQPESCSREHIQ AAAKAAAQ+R    E   ++ T SGW
Sbjct: 61  AAAFLRGNSAVLNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTETVEGGDQQRTRSGW 120

Query: 121 SPTTFEQVKEAPLLSPLRLGLLGFGPASDED--TLLLPAYF 157
           S T FEQVKE PLLSPLRLGLLGFGPA +E+  +LLLP YF
Sbjct: 121 SSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPSLLLPTYF 161

[Close]

BLAST of Cla012379 vs. NCBI nr
Match: gi|950937703|ref|XP_014521333.1| (PREDICTED: dehydration-responsive element-binding protein 3-like [Vigna radiata var. radiata])

HSP 1 Score: 166.4 bits (420), Expect = 4.0e-38
Identity = 88/145 (60.69%), Postives = 100/145 (68.97%), Query Frame = 1


Query: 4   AQSRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAA 63
           ++ RR          FRGVRKRSWGRYVSEIRLPG+KTR+WLGSFASPEMAARAYDSAA 
Sbjct: 12  SRKRRREAEAEAETAFRGVRKRSWGRYVSEIRLPGQKTRIWLGSFASPEMAARAYDSAAF 71

Query: 64  FLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGW------ 123
           FL+GTSA LNFPD V SLP+P S SR  IQSAAA AA     + T+    SS W      
Sbjct: 72  FLKGTSATLNFPDLVHSLPRPLSSSRRDIQSAAATAALHPPSLGTDSNSNSSSWLENLGD 131

Query: 124 ----SPTTFEQVKEAPLLSPLRLGL 139
               S  +FE VK+APL+SPLR+ L
Sbjct: 132 ESRISTMSFEDVKDAPLMSPLRVDL 156

[Close]

BLAST of Cla012379 vs. NCBI nr
Match: gi|920709314|gb|KOM51311.1| (hypothetical protein LR48_Vigan08g213800 [Vigna angularis])

HSP 1 Score: 166.4 bits (420), Expect = 4.0e-38
Identity = 89/143 (62.24%), Postives = 100/143 (69.93%), Query Frame = 1


Query: 6   SRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFL 65
           SR+ R        FRGVRKRSWGRYVSEIRLPG+KTR+WLGSFASPEMAARAYDSAA FL
Sbjct: 12  SRKRRREAEAETAFRGVRKRSWGRYVSEIRLPGQKTRIWLGSFASPEMAARAYDSAAFFL 71

Query: 66  RGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGW-------- 125
           +GTSA LNFPD V SLP+P S SR  IQSAAA AA     + T+    SS W        
Sbjct: 72  KGTSATLNFPDLVHSLPRPLSSSRRDIQSAAATAALHPPSLGTDTNSNSSSWLDNLGDES 131

Query: 126 --SPTTFEQVKEAPLLSPLRLGL 139
             S  +FE VK+APL+SPLR+ L
Sbjct: 132 RISTMSFEDVKDAPLMSPLRVDL 154

[Close]

BLAST of Cla012379 vs. NCBI nr
Match: gi|571480552|ref|XP_003534428.2| (PREDICTED: dehydration-responsive element-binding protein 3 [Glycine max])

HSP 1 Score: 156.8 bits (395), Expect = 3.2e-35
Identity = 79/118 (66.95%), Postives = 92/118 (77.97%), Query Frame = 1


Query: 19  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDSV 78
           FRGVRKRSWGRYVSEIRLPG+KTR+WLGSF SPEMAARAYDSAA FL+GTSA LNFPD V
Sbjct: 42  FRGVRKRSWGRYVSEIRLPGQKTRIWLGSFGSPEMAARAYDSAAFFLKGTSATLNFPDLV 101

Query: 79  SSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGWSPTTFEQVKEAPLLSPLRL 137
            SLP+P S SR  IQSAAA+AA      + E+    +  + ++F  V EAPL+SPLR+
Sbjct: 102 HSLPRPLSSSRRDIQSAAAEAALHSPPPKEEQESIFTSTTTSSFHDVMEAPLMSPLRV 159

The following BLAST results are available for this feature:

BLAST of Cla012379 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF22_ARATH	7.1e-27	49.61	Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF02...	[more]
TINY_ARATH	1.9e-24	53.45	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE...	[more]
ERF36_ARATH	2.8e-23	52.43	Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF03...	[more]
ERF37_ARATH	3.6e-23	61.45	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF03...	[more]
DREB3_ARATH	8.1e-23	45.11	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB...	[more]

BLAST of Cla012379 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSQ8_CUCSA	1.9e-63	79.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G647260 PE=4 SV=1	[more]
A0A0S3SEW2_PHAAN	2.8e-38	62.24	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G268700 PE=...	[more]
A0A0L9V8B8_PHAAN	2.8e-38	62.24	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g213800 PE=4 SV=1	[more]
A0A0B2PVR9_GLYSO	2.2e-35	66.95	Dehydration-responsive element-binding protein 3 OS=Glycine soja GN=glysoja_0060...	[more]
K7LFN0_SOYBN	2.2e-35	66.95	Uncharacterized protein OS=Glycine max GN=GLYMA_09G233800 PE=4 SV=1	[more]

BLAST of Cla012379 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447711\|ref\|XP_004141611.1\|	2.8e-63	79.75	PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis sativus...	[more]
gi\|659119539\|ref\|XP_008459710.1\|	8.0e-63	80.12	PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis melo]	[more]
gi\|950937703\|ref\|XP_014521333.1\|	4.0e-38	60.69	PREDICTED: dehydration-responsive element-binding protein 3-like [Vigna radiata ...	[more]
gi\|920709314\|gb\|KOM51311.1\|	4.0e-38	62.24	hypothetical protein LR48_Vigan08g213800 [Vigna angularis]	[more]
gi\|571480552\|ref\|XP_003534428.2\|	3.2e-35	66.95	PREDICTED: dehydration-responsive element-binding protein 3 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla012379	Cla012379.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 19..30 score: 2.2E-11coord: 57..77 score: 2.2
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 18..77 score: 6.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 19..67 score: 3.1
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 18..81 score: 2.5
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 18..75 score: 20
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 18..77 score: 6.54
None	No IPR available	unknown	Coil	Coil	coord: 89..112 scor
None	No IPR available	PANTHER	PTHR31985	FAMILY NOT NAMED	coord: 3..110 score: 3.1
None	No IPR available	PANTHER	PTHR31985:SF26	SUBFAMILY NOT NAMED	coord: 3..110 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla012379	Cla97C08G145930	Watermelon (97103) v2	wmwmbB101
Cla012379	Csa5G647260	Cucumber (Chinese Long) v2	cuwmB379
Cla012379	MELO3C022119	Melon (DHL92) v3.5.1	mewmB009
Cla012379	ClCG08G001830	Watermelon (Charleston Gray)	wcgwmB401
Cla012379	CSPI05G30310	Wild cucumber (PI 183967)	cpiwmB385
Cla012379	Cucsa.237800	Cucumber (Gy14) v1	cgywmB444
Cla012379	CmaCh09G012040	Cucurbita maxima (Rimu)	cmawmB017
Cla012379	CmoCh09G012040	Cucurbita moschata (Rifu)	cmowmB012
Cla012379	Lsi08G001810	Bottle gourd (USVL1VR-Ls)	lsiwmB467
Cla012379	CsGy5G029710	Cucumber (Gy14) v2	cgybwmB351
Cla012379	MELO3C022119.2	Melon (DHL92) v3.6.1	medwmB007
Cla012379	Carg27048	Silver-seed gourd	carwmB0028
Cla012379	CsaV3_5G039410	Cucumber (Chinese Long) v3	cucwmB402
Cla012379	Bhi06G000119	Wax gourd	wgowmB124

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla012379	Cucurbita maxima (Rimu)	cmawmB417
Cla012379	Cucurbita moschata (Rifu)	cmowmB411
Cla012379	Cucurbita pepo (Zucchini)	cpewmB544
Cla012379	Cucurbita pepo (Zucchini)	cpewmB759