CmoCh01G008960 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh01G008960
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(Dehydration responsive element binding transcription factor) (Ethylene-responsive transcription factor)
LocationCmo_Chr01 : 4988566 .. 4989036 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACCCACTTACAGAGGCGTTCGTAAGCGCAAATGGGGGAAATGGGTCTCGGAAATCCGCCAACCCGGCAAAAAAACCCGAATCTGGCTCGGCAGTTACGACTTCCCGGCGATGGCCGCTGCCGCATACGACGTCGCCGCACTCCACCTCCGTGGACGTAACGCCCAGCTTAACTTCCCCGAGCTGGCCGAGACCTTCCCCCGGCCTGAGAGTTCGAGGGCAGAGGACATTCAGAGTGCGGCGCAGATGGCTGCATTGCGAATGAGGAACCCGGTCGGGGCGGCGCCATTTAGAGTGGGGCTGTCGGAGAGTGAGATACAGGCGATAAATGAGTCGCCGTTGGATTCGCCGAGGACGATGTGGATGCAGATGGCGGCGGAGGCGGAGGCAGTTTGTTTGGAGGAAGAGTCGGGGTTTGATGAGGGGGAGGATAACATCACGACGCATCATTCTATATGGGATTCTTGA

mRNA sequence

ATGGAACCCACTTACAGAGGCGTTCGTAAGCGCAAATGGGGGAAATGGGTCTCGGAAATCCGCCAACCCGGCAAAAAAACCCGAATCTGGCTCGGCAGTTACGACTTCCCGGCGATGGCCGCTGCCGCATACGACGTCGCCGCACTCCACCTCCGTGGACGTAACGCCCAGCTTAACTTCCCCGAGCTGGCCGAGACCTTCCCCCGGCCTGAGAGTTCGAGGGCAGAGGACATTCAGAGTGCGGCGCAGATGGCTGCATTGCGAATGAGGAACCCGGTCGGGGCGGCGCCATTTAGAGTGGGGCTGTCGGAGAGTGAGATACAGGCGATAAATGAGTCGCCGTTGGATTCGCCGAGGACGATGTGGATGCAGATGGCGGCGGAGGCGGAGGCAGTTTGTTTGGAGGAAGAGTCGGGGTTTGATGAGGGGGAGGATAACATCACGACGCATCATTCTATATGGGATTCTTGA

Coding sequence (CDS)

ATGGAACCCACTTACAGAGGCGTTCGTAAGCGCAAATGGGGGAAATGGGTCTCGGAAATCCGCCAACCCGGCAAAAAAACCCGAATCTGGCTCGGCAGTTACGACTTCCCGGCGATGGCCGCTGCCGCATACGACGTCGCCGCACTCCACCTCCGTGGACGTAACGCCCAGCTTAACTTCCCCGAGCTGGCCGAGACCTTCCCCCGGCCTGAGAGTTCGAGGGCAGAGGACATTCAGAGTGCGGCGCAGATGGCTGCATTGCGAATGAGGAACCCGGTCGGGGCGGCGCCATTTAGAGTGGGGCTGTCGGAGAGTGAGATACAGGCGATAAATGAGTCGCCGTTGGATTCGCCGAGGACGATGTGGATGCAGATGGCGGCGGAGGCGGAGGCAGTTTGTTTGGAGGAAGAGTCGGGGTTTGATGAGGGGGAGGATAACATCACGACGCATCATTCTATATGGGATTCTTGA
Homology
[Close]
BLAST of CmoCh01G008960 vs. Swiss-Prot
Match: ERF22_ARATH (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF022 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-41
Identity = 97/167 (58.08%), Postives = 113/167 (67.66%), Query Frame = 1 

Query: 4   TYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNFPEL 63
           +YRG+R+RKWGKWVSEIR+PGKKTRIWLGSY+   MAAAAYD AALHLRGR   LNFPEL
Sbjct: 19  SYRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPEL 78

Query: 64  AETFPRPESSRAEDIQSAAQMAAL-----RMRNPV---GAAPFRVGLSESEIQAINESPL 123
            ++FPRPESS +E IQ+AAQ AAL     R+  P    G    RVGLS  +IQAINESPL
Sbjct: 79  VDSFPRPESSSSEHIQAAAQDAALMFKPGRLSEPALESGQGLSRVGLSPDQIQAINESPL 138

Query: 124 DSPRTMWMQMAAEAEAVCLEEESGFDEGEDN------ITTHHSIWDS 157
           DSPR  WMQ   + E    EE  G   G+ +      +    SIW+S
Sbjct: 139 DSPRMGWMQ---DLEVADYEELYGQFFGQHDRDEFFEMQQFQSIWNS 182

[Close]
BLAST of CmoCh01G008960 vs. Swiss-Prot
Match: ERF21_ARATH (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF021 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-31
Identity = 74/130 (56.92%), Postives = 83/130 (63.85%), Query Frame = 1 

Query: 5   YRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNFPELA 64
           YRGVRKRKWGKWVSEIR+PG K RIWLGS++ P MAA AYDVAA H RGR A+LNFPELA
Sbjct: 24  YRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPELA 83

Query: 65  ETFPRPESSRAEDIQSAAQMAAL-------------RMRNPVGAAPFRVGLSESEIQAIN 122
            + PRP  S ++ I+ A   A L                +    AP  V LS  EIQAIN
Sbjct: 84  SSLPRPADSSSDSIRMAVHEATLCRTTEGTESAMQVDSSSSSNVAPTMVRLSPREIQAIN 143

[Close]
BLAST of CmoCh01G008960 vs. Swiss-Prot
Match: ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 6.6e-25
Identity = 56/84 (66.67%), Postives = 62/84 (73.81%), Query Frame = 1 

Query: 3   PTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNFPE 62
           P Y GVRKR+WGKWVSEIR+P KK+RIWLGS+  P MAA AYDVAA  L+GR AQLNFPE
Sbjct: 43  PVYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPE 102

Query: 63  LAETFPRPESSRAEDIQSAAQMAA 87
             E  PRP +    DIQ AA  AA
Sbjct: 103 EIEDLPRPSTCTPRDIQVAAAKAA 126

[Close]
BLAST of CmoCh01G008960 vs. Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.7e-25
Identity = 61/118 (51.69%), Postives = 78/118 (66.10%), Query Frame = 1 

Query: 3   PTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNFPE 62
           P YRGVRKR WGKWVSEIR+P KK+RIWLG++  P MAA A+DVAAL ++G +A LNFP+
Sbjct: 34  PVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPD 93

Query: 63  LAETFPRPESSRAEDIQSAAQMAALRMRNPVGAAPFRVGLSESEIQAINESPLDSPRT 121
           LA +FPRP S    DIQ AA  AA    +   ++   +  S S+  +  ES + S  T
Sbjct: 94  LAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLESLVSSSAT 151

[Close]
BLAST of CmoCh01G008960 vs. Swiss-Prot
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF036 PE=2 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 8.7e-25
Identity = 65/128 (50.78%), Postives = 80/128 (62.50%), Query Frame = 1 

Query: 3   PTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNFPE 62
           P YRGVR R WGKWVSEIRQP KKTRIWLG++    MAA A+DVAAL ++G +A LNFPE
Sbjct: 59  PVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPE 118

Query: 63  LAETFPRPESSRAEDIQSAAQMAALRMRNPVGAAPFRVGLSESEIQAINESPLDSPRTMW 122
           LA  FPRP SS   DIQ+AA  AA               + E ++   +E+P   P +  
Sbjct: 119 LASLFPRPASSSPHDIQTAAAEAAAM-------------VVEEKLLEKDEAPEAPPSSES 173

Query: 123 MQMAAEAE 131
             +AAE+E
Sbjct: 179 SYVAAESE 173

[Close]
BLAST of CmoCh01G008960 vs. TrEMBL
Match: A0A0A0KUT8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G649870 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.3e-48
Identity = 111/165 (67.27%), Postives = 125/165 (75.76%), Query Frame = 1 

Query: 1   MEPTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNF 60
           M+P YRGVRKRKWGKWVSEIR+PGKKTRIWLGSY  P MAAAAYDVAALHLRG +A+LNF
Sbjct: 1   MDPNYRGVRKRKWGKWVSEIREPGKKTRIWLGSYHLPEMAAAAYDVAALHLRGPDARLNF 60

Query: 61  PELAETFPRPESSRAEDIQSAAQMAALRMRN----PVGAAPFRVGLSESEIQAINESPLD 120
           P+LA++FPRP SS  + IQ+AA MAALR  N        AP RVGLS S+IQAINESPLD
Sbjct: 61  PDLADSFPRPASSSPDHIQAAAHMAALRFANTKPPEPAPAPVRVGLSASQIQAINESPLD 120

Query: 121 SPRTMWMQMAAEAEAVCLEEESGFDEGE----DNITTH--HSIWD 156
           SP TMWMQMA  AEA+ LE     D+ E    +N+  H  HSIWD
Sbjct: 121 SP-TMWMQMA--AEALSLEGHEWDDDEEYNYYNNMQHHHDHSIWD 162

[Close]
BLAST of CmoCh01G008960 vs. TrEMBL
Match: B9IQB7_POPTR (AP2 domain-containing transcription factor family protein OS=Populus trichocarpa GN=POPTR_0019s10430g PE=4 SV=2)

HSP 1 Score: 184.9 bits (468), Expect = 7.6e-44
Identity = 102/174 (58.62%), Postives = 117/174 (67.24%), Query Frame = 1 

Query: 3   PTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNFPE 62
           P YRGVR+RKWGKWVSEIR+PGKKTRIWLGSY+ P MAAAAYDVAALHLRGR AQLNFPE
Sbjct: 15  PRYRGVRQRKWGKWVSEIREPGKKTRIWLGSYEIPEMAAAAYDVAALHLRGRGAQLNFPE 74

Query: 63  LAETFPRPESSRAEDIQSAAQMAALRMRNPV--------------GAAPFRVGLSESEIQ 122
           + +  P+P SS AED+Q AAQ AAL  R P+              G  P RVGLS S+IQ
Sbjct: 75  MVDILPQPASSSAEDVQMAAQEAALMFRRPMKCSEAVSGDSSVGGGLGPVRVGLSPSQIQ 134

Query: 123 AINESPLDSPRTMWMQMAAEAEAVCLEEESGFDEGED-------NITTHHSIWD 156
           AINE+PLDSP+ MWM++A    A+ LEE     +  D           H SIWD
Sbjct: 135 AINEAPLDSPK-MWMELAG---ALLLEEPMIMSDDIDVAYRDEWGEMQHDSIWD 184

[Close]
BLAST of CmoCh01G008960 vs. TrEMBL
Match: A9PL88_POPTR (TINY-like protein OS=Populus trichocarpa GN=TINYL19 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.7e-43
Identity = 100/175 (57.14%), Postives = 118/175 (67.43%), Query Frame = 1 

Query: 2   EPTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNFP 61
           +P YRGVR+RKWGKWVSEIR+PGKKTRIWLGSY+ P MAAAAYDVAALHLRGR AQLNFP
Sbjct: 14  QPRYRGVRQRKWGKWVSEIREPGKKTRIWLGSYEMPEMAAAAYDVAALHLRGRGAQLNFP 73

Query: 62  ELAETFPRPESSRAEDIQSAAQMAALRMRNPV---------------GAAPFRVGLSESE 121
           E+ ++ PRP SS  ED+Q AAQ AAL  R P+                  P RVGLS S+
Sbjct: 74  EMVDSLPRPASSSTEDVQMAAQEAALLFRRPIKCSEGVGGSSSGGGGSLGPVRVGLSPSQ 133

Query: 122 IQAINESPLDSPRTMWMQMAAEA---EAVCLEEESGF---DEGEDNITTHHSIWD 156
           IQAINE+PLDSP+ MWM++A      E V + ++      DE  +    H SIWD
Sbjct: 134 IQAINEAPLDSPK-MWMELAGALLLDEPVAMGDDIDVELSDEWGEMEHEHDSIWD 187

[Close]
BLAST of CmoCh01G008960 vs. TrEMBL
Match: U5FUY3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s10330g PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.7e-43
Identity = 100/175 (57.14%), Postives = 118/175 (67.43%), Query Frame = 1 

Query: 2   EPTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNFP 61
           +P YRGVR+RKWGKWVSEIR+PGKKTRIWLGSY+ P MAAAAYDVAALHLRGR AQLNFP
Sbjct: 14  QPRYRGVRQRKWGKWVSEIREPGKKTRIWLGSYEMPEMAAAAYDVAALHLRGRGAQLNFP 73

Query: 62  ELAETFPRPESSRAEDIQSAAQMAALRMRNPV---------------GAAPFRVGLSESE 121
           E+ ++ PRP SS  ED+Q AAQ AAL  R P+                  P RVGLS S+
Sbjct: 74  EMVDSLPRPASSSTEDVQMAAQEAALLFRRPIKCSEGVSGSSSGGGGSLGPVRVGLSPSQ 133

Query: 122 IQAINESPLDSPRTMWMQMAAEA---EAVCLEEESGF---DEGEDNITTHHSIWD 156
           IQAINE+PLDSP+ MWM++A      E V + ++      DE  +    H SIWD
Sbjct: 134 IQAINEAPLDSPK-MWMELAGALLLDEPVAMGDDIDVELSDEWGEMEHEHDSIWD 187

[Close]
BLAST of CmoCh01G008960 vs. TrEMBL
Match: M1BJ67_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018054 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.9e-43
Identity = 102/165 (61.82%), Postives = 118/165 (71.52%), Query Frame = 1 

Query: 5   YRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGR--NAQLNFPE 64
           YRGVRKRKWGKWVSEIR+PGKKTRIWLGSY+   MAAAAYDVAA HL+G   N +LNFPE
Sbjct: 14  YRGVRKRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDVAAFHLKGERPNLRLNFPE 73

Query: 65  LAETFPRPESSRAEDIQSAAQMAALRMRNPV-------GAAPFRVGLSESEIQAINESPL 124
           L  TFP+P SSR ED+Q AA  AA+R + P+       GA P RVGLS S+IQAINESPL
Sbjct: 74  LIHTFPKPSSSRPEDVQMAAHEAAMRFKRPIDDHPDNCGAGPVRVGLSPSQIQAINESPL 133

Query: 125 DSPRTMWMQMAA---EAEAVCLEEESGFDEGE-DNITTHH-SIWD 156
           DSP+ MWM++A      E  C    S F++ + D I  HH SIWD
Sbjct: 134 DSPK-MWMELAGLLPVREYTC--PSSSFEDHQWDEIQYHHDSIWD 175

[Close]
BLAST of CmoCh01G008960 vs. TAIR10
Match: AT1G33760.1 (AT1G33760.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 170.2 bits (430), Expect = 9.8e-43
Identity = 97/167 (58.08%), Postives = 113/167 (67.66%), Query Frame = 1 

Query: 4   TYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNFPEL 63
           +YRG+R+RKWGKWVSEIR+PGKKTRIWLGSY+   MAAAAYD AALHLRGR   LNFPEL
Sbjct: 19  SYRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPEL 78

Query: 64  AETFPRPESSRAEDIQSAAQMAAL-----RMRNPV---GAAPFRVGLSESEIQAINESPL 123
            ++FPRPESS +E IQ+AAQ AAL     R+  P    G    RVGLS  +IQAINESPL
Sbjct: 79  VDSFPRPESSSSEHIQAAAQDAALMFKPGRLSEPALESGQGLSRVGLSPDQIQAINESPL 138

Query: 124 DSPRTMWMQMAAEAEAVCLEEESGFDEGEDN------ITTHHSIWDS 157
           DSPR  WMQ   + E    EE  G   G+ +      +    SIW+S
Sbjct: 139 DSPRMGWMQ---DLEVADYEELYGQFFGQHDRDEFFEMQQFQSIWNS 182

[Close]
BLAST of CmoCh01G008960 vs. TAIR10
Match: AT1G71450.1 (AT1G71450.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 137.5 bits (345), Expect = 7.0e-33
Identity = 74/130 (56.92%), Postives = 83/130 (63.85%), Query Frame = 1 

Query: 5   YRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNFPELA 64
           YRGVRKRKWGKWVSEIR+PG K RIWLGS++ P MAA AYDVAA H RGR A+LNFPELA
Sbjct: 24  YRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPELA 83

Query: 65  ETFPRPESSRAEDIQSAAQMAAL-------------RMRNPVGAAPFRVGLSESEIQAIN 122
            + PRP  S ++ I+ A   A L                +    AP  V LS  EIQAIN
Sbjct: 84  SSLPRPADSSSDSIRMAVHEATLCRTTEGTESAMQVDSSSSSNVAPTMVRLSPREIQAIN 143

[Close]
BLAST of CmoCh01G008960 vs. TAIR10
Match: AT1G01250.1 (AT1G01250.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 3.7e-26
Identity = 56/84 (66.67%), Postives = 62/84 (73.81%), Query Frame = 1 

Query: 3   PTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNFPE 62
           P Y GVRKR+WGKWVSEIR+P KK+RIWLGS+  P MAA AYDVAA  L+GR AQLNFPE
Sbjct: 43  PVYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPE 102

Query: 63  LAETFPRPESSRAEDIQSAAQMAA 87
             E  PRP +    DIQ AA  AA
Sbjct: 103 EIEDLPRPSTCTPRDIQVAAAKAA 126

[Close]
BLAST of CmoCh01G008960 vs. TAIR10
Match: AT5G25810.1 (AT5G25810.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 114.8 bits (286), Expect = 4.9e-26
Identity = 61/118 (51.69%), Postives = 78/118 (66.10%), Query Frame = 1 

Query: 3   PTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNFPE 62
           P YRGVRKR WGKWVSEIR+P KK+RIWLG++  P MAA A+DVAAL ++G +A LNFP+
Sbjct: 34  PVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPD 93

Query: 63  LAETFPRPESSRAEDIQSAAQMAALRMRNPVGAAPFRVGLSESEIQAINESPLDSPRT 121
           LA +FPRP S    DIQ AA  AA    +   ++   +  S S+  +  ES + S  T
Sbjct: 94  LAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLESLVSSSAT 151

[Close]
BLAST of CmoCh01G008960 vs. TAIR10
Match: AT3G16280.1 (AT3G16280.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 114.8 bits (286), Expect = 4.9e-26
Identity = 65/128 (50.78%), Postives = 80/128 (62.50%), Query Frame = 1 

Query: 3   PTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNFPE 62
           P YRGVR R WGKWVSEIRQP KKTRIWLG++    MAA A+DVAAL ++G +A LNFPE
Sbjct: 59  PVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPE 118

Query: 63  LAETFPRPESSRAEDIQSAAQMAALRMRNPVGAAPFRVGLSESEIQAINESPLDSPRTMW 122
           LA  FPRP SS   DIQ+AA  AA               + E ++   +E+P   P +  
Sbjct: 119 LASLFPRPASSSPHDIQTAAAEAAAM-------------VVEEKLLEKDEAPEAPPSSES 173

Query: 123 MQMAAEAE 131
             +AAE+E
Sbjct: 179 SYVAAESE 173

[Close]
BLAST of CmoCh01G008960 vs. NCBI nr
Match: gi|659119326|ref|XP_008459595.1| (PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis melo])

HSP 1 Score: 203.8 bits (517), Expect = 2.3e-49
Identity = 109/161 (67.70%), Postives = 126/161 (78.26%), Query Frame = 1 

Query: 1   MEPTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNF 60
           M+P YRGVRKRKWGKWVSEIR+PGKKTRIWLGSY  P MAAAAYDVAALHLRG +A+LNF
Sbjct: 1   MDPNYRGVRKRKWGKWVSEIREPGKKTRIWLGSYHLPEMAAAAYDVAALHLRGPDARLNF 60

Query: 61  PELAETFPRPESSRAEDIQSAAQMAALRMRN----PVGAAPFRVGLSESEIQAINESPLD 120
           P+LA++FPRP SS  + IQ+AA MAALR  N    P   AP RVGLS S+IQAINESPLD
Sbjct: 61  PDLADSFPRPASSSPDHIQAAAHMAALRFANTCKPPEPPAPVRVGLSPSQIQAINESPLD 120

Query: 121 SPRTMWMQMAAEAEAVCLEE-ESGFDEGEDNITT-HHSIWD 156
           SP TMWMQMAAEA ++   E +  ++   +N+   HHSIWD
Sbjct: 121 SP-TMWMQMAAEALSLQPREWDDEYNYNNNNMQLHHHSIWD 160

[Close]
BLAST of CmoCh01G008960 vs. NCBI nr
Match: gi|449447757|ref|XP_004141634.1| (PREDICTED: ethylene-responsive transcription factor ERF022 [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 3.3e-48
Identity = 111/165 (67.27%), Postives = 125/165 (75.76%), Query Frame = 1 

Query: 1   MEPTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNF 60
           M+P YRGVRKRKWGKWVSEIR+PGKKTRIWLGSY  P MAAAAYDVAALHLRG +A+LNF
Sbjct: 1   MDPNYRGVRKRKWGKWVSEIREPGKKTRIWLGSYHLPEMAAAAYDVAALHLRGPDARLNF 60

Query: 61  PELAETFPRPESSRAEDIQSAAQMAALRMRN----PVGAAPFRVGLSESEIQAINESPLD 120
           P+LA++FPRP SS  + IQ+AA MAALR  N        AP RVGLS S+IQAINESPLD
Sbjct: 61  PDLADSFPRPASSSPDHIQAAAHMAALRFANTKPPEPAPAPVRVGLSASQIQAINESPLD 120

Query: 121 SPRTMWMQMAAEAEAVCLEEESGFDEGE----DNITTH--HSIWD 156
           SP TMWMQMA  AEA+ LE     D+ E    +N+  H  HSIWD
Sbjct: 121 SP-TMWMQMA--AEALSLEGHEWDDDEEYNYYNNMQHHHDHSIWD 162

[Close]
BLAST of CmoCh01G008960 vs. NCBI nr
Match: gi|1021514366|ref|XP_016200693.1| (PREDICTED: ethylene-responsive transcription factor ERF022-like [Arachis ipaensis])

HSP 1 Score: 191.4 bits (485), Expect = 1.2e-45
Identity = 105/175 (60.00%), Postives = 120/175 (68.57%), Query Frame = 1 

Query: 4   TYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNFPEL 63
           +YRGVRKRKWGKWVSEIR+PGKKTRIWLGSY+ P MAAAAYDVAALHLRGR+A+LNFPEL
Sbjct: 22  SYRGVRKRKWGKWVSEIREPGKKTRIWLGSYELPEMAAAAYDVAALHLRGRSARLNFPEL 81

Query: 64  AETFPRPESSRAEDIQSAAQMAALRMR-----------NPVGAAPFRVGLSESEIQAINE 123
            ET PRP SSRAED+Q+AAQ AALR +           N     P R+GLS S+IQAINE
Sbjct: 82  VETMPRPVSSRAEDVQAAAQQAALRFKSSTEVDSAPDNNKGTILPVRIGLSPSQIQAINE 141

Query: 124 SPLDSPRTMWMQMAAEA-----------EAVCLEEESGFDEGEDNITTHHSIWDS 157
           SPLDSP+ MWM+MA EA              C  +    +  E     H S+WDS
Sbjct: 142 SPLDSPK-MWMRMATEAFMFGFHDHNYHHDYCDYDYGMLELSEWEEIQHESLWDS 195

[Close]
BLAST of CmoCh01G008960 vs. NCBI nr
Match: gi|1009137615|ref|XP_015886151.1| (PREDICTED: ethylene-responsive transcription factor ERF022-like [Ziziphus jujuba])

HSP 1 Score: 185.7 bits (470), Expect = 6.4e-44
Identity = 100/152 (65.79%), Postives = 110/152 (72.37%), Query Frame = 1 

Query: 3   PTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNFPE 62
           P YRGVRKRKWGKWVSEIR+PGKKTRIWLGSY+ P MAAAAYDVAALH RGR A+LNFPE
Sbjct: 14  PAYRGVRKRKWGKWVSEIREPGKKTRIWLGSYEAPEMAAAAYDVAALHFRGRGARLNFPE 73

Query: 63  LAETFPRPESSRAEDIQSAAQMAALRMRNP----------------VGAAPFRVGLSESE 122
           L ++ PRP SS AED+Q AAQ AALR R P                V + P  VGLS S+
Sbjct: 74  LVDSLPRPASSMAEDVQLAAQQAALRFRGPIRVSAASATEVSSSGGVNSVPVTVGLSPSQ 133

Query: 123 IQAINESPLDSPRTMWMQMAAEAEAVCLEEES 139
           IQAINESPLDSP+ MWMQM   AEA  L + S
Sbjct: 134 IQAINESPLDSPK-MWMQM---AEAFLLGDHS 161

[Close]
BLAST of CmoCh01G008960 vs. NCBI nr
Match: gi|566239697|ref|XP_002325520.2| (AP2 domain-containing transcription factor family protein [Populus trichocarpa])

HSP 1 Score: 184.9 bits (468), Expect = 1.1e-43
Identity = 102/174 (58.62%), Postives = 117/174 (67.24%), Query Frame = 1 

Query: 3   PTYRGVRKRKWGKWVSEIRQPGKKTRIWLGSYDFPAMAAAAYDVAALHLRGRNAQLNFPE 62
           P YRGVR+RKWGKWVSEIR+PGKKTRIWLGSY+ P MAAAAYDVAALHLRGR AQLNFPE
Sbjct: 15  PRYRGVRQRKWGKWVSEIREPGKKTRIWLGSYEIPEMAAAAYDVAALHLRGRGAQLNFPE 74

Query: 63  LAETFPRPESSRAEDIQSAAQMAALRMRNPV--------------GAAPFRVGLSESEIQ 122
           + +  P+P SS AED+Q AAQ AAL  R P+              G  P RVGLS S+IQ
Sbjct: 75  MVDILPQPASSSAEDVQMAAQEAALMFRRPMKCSEAVSGDSSVGGGLGPVRVGLSPSQIQ 134

Query: 123 AINESPLDSPRTMWMQMAAEAEAVCLEEESGFDEGED-------NITTHHSIWD 156
           AINE+PLDSP+ MWM++A    A+ LEE     +  D           H SIWD
Sbjct: 135 AINEAPLDSPK-MWMELAG---ALLLEEPMIMSDDIDVAYRDEWGEMQHDSIWD 184

The following BLAST results are available for this feature:
BLAST of CmoCh01G008960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF22_ARATH1.7e-4158.08Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF02... [more]
ERF21_ARATH1.2e-3156.92Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF02... [more]
ERF23_ARATH6.6e-2566.67Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF02... [more]
TINY_ARATH8.7e-2551.69Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE... [more]
ERF36_ARATH8.7e-2550.78Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF03... [more]
BLAST of CmoCh01G008960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUT8_CUCSA2.3e-4867.27Uncharacterized protein OS=Cucumis sativus GN=Csa_5G649870 PE=4 SV=1[more]
B9IQB7_POPTR7.6e-4458.62AP2 domain-containing transcription factor family protein OS=Populus trichocarpa... [more]
A9PL88_POPTR1.7e-4357.14TINY-like protein OS=Populus trichocarpa GN=TINYL19 PE=4 SV=1[more]
U5FUY3_POPTR1.7e-4357.14Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s10330g PE=4 SV=1[more]
M1BJ67_SOLTU4.9e-4361.82Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018054 PE=4 SV=1[more]
BLAST of CmoCh01G008960 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G33760.19.8e-4358.08 Integrase-type DNA-binding superfamily protein[more]
AT1G71450.17.0e-3356.92 Integrase-type DNA-binding superfamily protein[more]
AT1G01250.13.7e-2666.67 Integrase-type DNA-binding superfamily protein[more]
AT5G25810.14.9e-2651.69 Integrase-type DNA-binding superfamily protein[more]
AT3G16280.14.9e-2650.78 Integrase-type DNA-binding superfamily protein[more]
BLAST of CmoCh01G008960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659119326|ref|XP_008459595.1|2.3e-4967.70PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis melo][more]
gi|449447757|ref|XP_004141634.1|3.3e-4867.27PREDICTED: ethylene-responsive transcription factor ERF022 [Cucumis sativus][more]
gi|1021514366|ref|XP_016200693.1|1.2e-4560.00PREDICTED: ethylene-responsive transcription factor ERF022-like [Arachis ipaensi... [more]
gi|1009137615|ref|XP_015886151.1|6.4e-4465.79PREDICTED: ethylene-responsive transcription factor ERF022-like [Ziziphus jujuba... [more]
gi|566239697|ref|XP_002325520.2|1.1e-4358.62AP2 domain-containing transcription factor family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G008960.1CmoCh01G008960.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 5..16
score: 3.4E-13coord: 43..63
score: 3.4
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 4..62
score: 2.0
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 4..53
score: 5.0
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 4..67
score: 4.0
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 4..61
score: 22
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 4..62
score: 3.33
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 2..156
score: 7.8
NoneNo IPR availablePANTHERPTHR31985:SF28SUBFAMILY NOT NAMEDcoord: 2..156
score: 7.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh01G008960CmaCh09G012040Cucurbita maxima (Rimu)cmacmoB056
CmoCh01G008960Cp4.1LG02g10910Cucurbita pepo (Zucchini)cmocpeB448
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh01G008960Watermelon (97103) v2cmowmbB481
CmoCh01G008960Watermelon (97103) v2cmowmbB482
CmoCh01G008960Wax gourdcmowgoB0553
CmoCh01G008960Cucurbita moschata (Rifu)cmocmoB021
CmoCh01G008960Cucumber (Gy14) v1cgycmoB0661
CmoCh01G008960Cucurbita maxima (Rimu)cmacmoB468
CmoCh01G008960Wild cucumber (PI 183967)cmocpiB476
CmoCh01G008960Cucumber (Chinese Long) v2cmocuB472
CmoCh01G008960Melon (DHL92) v3.5.1cmomeB375
CmoCh01G008960Watermelon (Charleston Gray)cmowcgB429
CmoCh01G008960Watermelon (Charleston Gray)cmowcgB430
CmoCh01G008960Watermelon (97103) v1cmowmB411
CmoCh01G008960Watermelon (97103) v1cmowmB412
CmoCh01G008960Cucurbita pepo (Zucchini)cmocpeB468
CmoCh01G008960Bottle gourd (USVL1VR-Ls)cmolsiB440
CmoCh01G008960Cucumber (Gy14) v2cgybcmoB611
CmoCh01G008960Melon (DHL92) v3.6.1cmomedB431
CmoCh01G008960Silver-seed gourdcarcmoB0230
CmoCh01G008960Cucumber (Chinese Long) v3cmocucB0565