CmaCh08G012090 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh08G012090
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionGlutaredoxin
LocationCma_Chr08 : 7429729 .. 7430037 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACCGTAAACAAGTTGGTGTTAGACAGGCCTGTCGTGGTGTTCAGCAAGAACAGTTGCTGTATGAGCCACACTGTCAAGTCACTCTTGTGCGACTTTGGAGTTAACCCGACGGTGTACGAGCTCGATGAGCTCCCGGGGGGGAAAGAAATCGAGCAAGCTCTCATTCGGATCGGTTGCAGTCCTGCCGTGCCTGCAGTGTTCATCGGCGACCAACTGATCGGTGGTGCGAATGAAGTGATGAGCCTTCATCTTAAGCGGAACTTGATCCCCATGCTTAGAAGGGCTGGAGCTTTGTGGGTTTAA

mRNA sequence

ATGGAGACCGTAAACAAGTTGGTGTTAGACAGGCCTGTCGTGGTGTTCAGCAAGAACAGTTGCTGTATGAGCCACACTGTCAAGTCACTCTTGTGCGACTTTGGAGTTAACCCGACGGTGTACGAGCTCGATGAGCTCCCGGGGGGGAAAGAAATCGAGCAAGCTCTCATTCGGATCGGTTGCAGTCCTGCCGTGCCTGCAGTGTTCATCGGCGACCAACTGATCGGTGGTGCGAATGAAGTGATGAGCCTTCATCTTAAGCGGAACTTGATCCCCATGCTTAGAAGGGCTGGAGCTTTGTGGGTTTAA

Coding sequence (CDS)

ATGGAGACCGTAAACAAGTTGGTGTTAGACAGGCCTGTCGTGGTGTTCAGCAAGAACAGTTGCTGTATGAGCCACACTGTCAAGTCACTCTTGTGCGACTTTGGAGTTAACCCGACGGTGTACGAGCTCGATGAGCTCCCGGGGGGGAAAGAAATCGAGCAAGCTCTCATTCGGATCGGTTGCAGTCCTGCCGTGCCTGCAGTGTTCATCGGCGACCAACTGATCGGTGGTGCGAATGAAGTGATGAGCCTTCATCTTAAGCGGAACTTGATCCCCATGCTTAGAAGGGCTGGAGCTTTGTGGGTTTAA

Protein sequence

METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIGCSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV
Homology
[Close]
BLAST of CmaCh08G012090 vs. Swiss-Prot
Match: GRXS2_ARATH (Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana GN=GRXS2 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 8.7e-42
Identity = 74/102 (72.55%), Postives = 92/102 (90.20%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           M+ + K+V++RPVV++SK+SCCMSHT+K+LLCDFG NP VYELDE+  G+EIEQAL+R+G
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSPAVP VFIG +L+GGANEVMSLHL  +LIPML+RAGALWV
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]
BLAST of CmaCh08G012090 vs. Swiss-Prot
Match: GRXS5_ARATH (Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana GN=GRXS5 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.0e-39
Identity = 70/102 (68.63%), Postives = 89/102 (87.25%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           ME + K++ ++ VV+FSKNSCCMSHT+K+L  DFGVNPT+YELDE+  G+EIEQAL ++G
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSP VP VFIG QL+GGAN+VMSLHL R+L+PML+RAGALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]
BLAST of CmaCh08G012090 vs. Swiss-Prot
Match: GRXS4_ARATH (Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana GN=GRXS4 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 9.0e-39
Identity = 69/102 (67.65%), Postives = 88/102 (86.27%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           M+ + K++ ++ VV+FSKNSCCMSHT+K+L  DFGVNPT+YELDE+  GKEIEQAL ++G
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSP VP VFIG QL+GGAN+VMSLHL R+L+PML+R GALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]
BLAST of CmaCh08G012090 vs. Swiss-Prot
Match: GRXS3_ARATH (Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana GN=GRXS3 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.5e-38
Identity = 69/102 (67.65%), Postives = 87/102 (85.29%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           ME + K++ ++ VV+FSKNSCCMSHT+K+L  D GVNPT+YELDE+  GKEIE AL ++G
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSP VP VFIG QL+GGAN+VMSLHL R+L+PML+RAGALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]
BLAST of CmaCh08G012090 vs. Swiss-Prot
Match: GRXS7_ARATH (Monothiol glutaredoxin-S7 OS=Arabidopsis thaliana GN=GRXS7 PE=3 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 7.6e-38
Identity = 69/102 (67.65%), Postives = 86/102 (84.31%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           ME + K+  ++ +V+FSKNSCCMSHT+K+L  D GVNPT+YELDE+  GKEIEQAL ++G
Sbjct: 1   MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSP VP VFIG QL+GGAN+VMSLHL R+LIPML+R GALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102

[Close]
BLAST of CmaCh08G012090 vs. TrEMBL
Match: U3RJA0_CUCSA (Glutaredoxin OS=Cucumis sativus GN=GRX3 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 2.8e-47
Identity = 91/102 (89.22%), Postives = 99/102 (97.06%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           METVNKLV DRPVVVFSKNSCCMSH++K+LLCDFGVNPTVYELDELP GKEIEQAL+RIG
Sbjct: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           C+PAVPAVFIG +L+GGANEVMSLHLKRNLIPMLR+AGALWV
Sbjct: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 102

[Close]
BLAST of CmaCh08G012090 vs. TrEMBL
Match: D7LYE9_ARALL (Glutaredoxin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488744 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.5e-40
Identity = 75/102 (73.53%), Postives = 94/102 (92.16%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           M+ + K+V++RPVV++SK+SCCMSHT+K+LLCDFG NP VYELDELP G++IE+AL+R+G
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDELPRGRDIERALLRLG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSPAVPAVFIG +L+GGANEVMSLHL  +LIPML+RAGALWV
Sbjct: 61  CSPAVPAVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]
BLAST of CmaCh08G012090 vs. TrEMBL
Match: A0A078EKR9_BRANA (BnaC02g08250D protein OS=Brassica napus GN=BnaC02g08250D PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.5e-40
Identity = 76/102 (74.51%), Postives = 93/102 (91.18%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           ME + K+VL+RPVV++SK SCCMSHTVK+LLCDFG NP V+ELDE+P G+EIEQAL+R+G
Sbjct: 1   MEMITKMVLERPVVIYSKTSCCMSHTVKTLLCDFGANPAVHELDEIPRGREIEQALLRLG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSPAVPA+FIG +L+GGANEVMSLHL  +LIPML++AGALWV
Sbjct: 61  CSPAVPAIFIGGELVGGANEVMSLHLNGSLIPMLKQAGALWV 102

[Close]
BLAST of CmaCh08G012090 vs. TrEMBL
Match: M4E4I5_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.9e-40
Identity = 76/102 (74.51%), Postives = 93/102 (91.18%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           ME + K+VL+RPVV++SK+SCCMSHTVK+LLCDFG NP V+ELDE+P G+EIEQAL+R+G
Sbjct: 1   MEMITKMVLERPVVIYSKSSCCMSHTVKTLLCDFGANPAVHELDEVPRGREIEQALLRLG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSPAVPA+FIG +L+GGANEVMSLHL  +LIPML+ AGALWV
Sbjct: 61  CSPAVPAIFIGGELVGGANEVMSLHLNGSLIPMLKHAGALWV 102

[Close]
BLAST of CmaCh08G012090 vs. TrEMBL
Match: V4LHG7_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10015538mg PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.5e-40
Identity = 76/102 (74.51%), Postives = 93/102 (91.18%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           ME + K+VL+RPVV++SK++CCMSHT+K+LLCDFG NP VYELDE+  G+EIEQAL+R+G
Sbjct: 1   MEMITKMVLERPVVIYSKSACCMSHTIKTLLCDFGANPAVYELDEVSRGREIEQALLRLG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSPAVPAVFIG +L+GGANEVMSLHL  +LIPML+RAGALWV
Sbjct: 61  CSPAVPAVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]
BLAST of CmaCh08G012090 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein)

HSP 1 Score: 170.6 bits (431), Expect = 4.9e-43
Identity = 74/102 (72.55%), Postives = 92/102 (90.20%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           M+ + K+V++RPVV++SK+SCCMSHT+K+LLCDFG NP VYELDE+  G+EIEQAL+R+G
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSPAVP VFIG +L+GGANEVMSLHL  +LIPML+RAGALWV
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]
BLAST of CmaCh08G012090 vs. TAIR10
Match: AT4G15690.1 (AT4G15690.1 Thioredoxin superfamily protein)

HSP 1 Score: 161.8 bits (408), Expect = 2.3e-40
Identity = 70/102 (68.63%), Postives = 89/102 (87.25%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           ME + K++ ++ VV+FSKNSCCMSHT+K+L  DFGVNPT+YELDE+  G+EIEQAL ++G
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSP VP VFIG QL+GGAN+VMSLHL R+L+PML+RAGALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]
BLAST of CmaCh08G012090 vs. TAIR10
Match: AT4G15680.1 (AT4G15680.1 Thioredoxin superfamily protein)

HSP 1 Score: 160.6 bits (405), Expect = 5.1e-40
Identity = 69/102 (67.65%), Postives = 88/102 (86.27%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           M+ + K++ ++ VV+FSKNSCCMSHT+K+L  DFGVNPT+YELDE+  GKEIEQAL ++G
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSP VP VFIG QL+GGAN+VMSLHL R+L+PML+R GALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]
BLAST of CmaCh08G012090 vs. TAIR10
Match: AT4G15700.1 (AT4G15700.1 Thioredoxin superfamily protein)

HSP 1 Score: 159.8 bits (403), Expect = 8.6e-40
Identity = 69/102 (67.65%), Postives = 87/102 (85.29%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           ME + K++ ++ VV+FSKNSCCMSHT+K+L  D GVNPT+YELDE+  GKEIE AL ++G
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSP VP VFIG QL+GGAN+VMSLHL R+L+PML+RAGALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]
BLAST of CmaCh08G012090 vs. TAIR10
Match: AT4G15670.1 (AT4G15670.1 Thioredoxin superfamily protein)

HSP 1 Score: 157.5 bits (397), Expect = 4.3e-39
Identity = 69/102 (67.65%), Postives = 86/102 (84.31%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           ME + K+  ++ +V+FSKNSCCMSHT+K+L  D GVNPT+YELDE+  GKEIEQAL ++G
Sbjct: 1   MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSP VP VFIG QL+GGAN+VMSLHL R+LIPML+R GALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102

[Close]
BLAST of CmaCh08G012090 vs. NCBI nr
Match: gi|566006172|ref|NP_001274383.1| (monothiol glutaredoxin-S2-like [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 4.0e-47
Identity = 91/102 (89.22%), Postives = 99/102 (97.06%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           METVNKLV DRPVVVFSKNSCCMSH++K+LLCDFGVNPTVYELDELP GKEIEQAL+RIG
Sbjct: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           C+PAVPAVFIG +L+GGANEVMSLHLKRNLIPMLR+AGALWV
Sbjct: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 102

[Close]
BLAST of CmaCh08G012090 vs. NCBI nr
Match: gi|727563611|ref|XP_010454112.1| (PREDICTED: monothiol glutaredoxin-S2-like [Camelina sativa])

HSP 1 Score: 174.1 bits (440), Expect = 1.3e-40
Identity = 77/102 (75.49%), Postives = 93/102 (91.18%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           ME + K+V++RPVV++SK+SCCMSHT+K+LLCDFG NP VYELDE+  G+EIEQAL+RIG
Sbjct: 1   MEMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRIG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSPAVPAVFIG +L+GGANEVMSLHL  +LIPML+RAGALWV
Sbjct: 61  CSPAVPAVFIGGELVGGANEVMSLHLSGSLIPMLKRAGALWV 102

[Close]
BLAST of CmaCh08G012090 vs. NCBI nr
Match: gi|951003839|ref|XP_014507713.1| (PREDICTED: monothiol glutaredoxin-S2-like [Vigna radiata var. radiata])

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-40
Identity = 77/102 (75.49%), Postives = 94/102 (92.16%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           M+ VNK+V +RPVV+FSK+SCCMSHT+K+L CDFGVNP V+ELDE+P G+EIEQAL R+G
Sbjct: 1   MDRVNKMVSERPVVIFSKSSCCMSHTIKTLFCDFGVNPLVHELDEIPRGREIEQALSRLG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSP+VPAVFIG +L+GGANEVMSLHL R+LIPML++AGALWV
Sbjct: 61  CSPSVPAVFIGGELVGGANEVMSLHLDRSLIPMLKKAGALWV 102

[Close]
BLAST of CmaCh08G012090 vs. NCBI nr
Match: gi|727489185|ref|XP_010420636.1| (PREDICTED: monothiol glutaredoxin-S2 [Camelina sativa])

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-40
Identity = 76/102 (74.51%), Postives = 93/102 (91.18%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           ME + K+V++RPVV++SK+SCCMSHT+K+LLCDFG NP VYELDE+  G+EIEQAL+RIG
Sbjct: 1   MEMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRIG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSPAVPAVFIG +L+GGANE+MSLHL  +LIPML+RAGALWV
Sbjct: 61  CSPAVPAVFIGGELVGGANEIMSLHLNGSLIPMLKRAGALWV 102

[Close]
BLAST of CmaCh08G012090 vs. NCBI nr
Match: gi|297812045|ref|XP_002873906.1| (glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-40
Identity = 75/102 (73.53%), Postives = 94/102 (92.16%), Query Frame = 1 

Query: 1   METVNKLVLDRPVVVFSKNSCCMSHTVKSLLCDFGVNPTVYELDELPGGKEIEQALIRIG 60
           M+ + K+V++RPVV++SK+SCCMSHT+K+LLCDFG NP VYELDELP G++IE+AL+R+G
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDELPRGRDIERALLRLG 60

Query: 61  CSPAVPAVFIGDQLIGGANEVMSLHLKRNLIPMLRRAGALWV 103
           CSPAVPAVFIG +L+GGANEVMSLHL  +LIPML+RAGALWV
Sbjct: 61  CSPAVPAVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

The following BLAST results are available for this feature:
BLAST of CmaCh08G012090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GRXS2_ARATH8.7e-4272.55Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana GN=GRXS2 PE=3 SV=1[more]
GRXS5_ARATH4.0e-3968.63Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana GN=GRXS5 PE=3 SV=1[more]
GRXS4_ARATH9.0e-3967.65Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana GN=GRXS4 PE=3 SV=1[more]
GRXS3_ARATH1.5e-3867.65Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana GN=GRXS3 PE=3 SV=1[more]
GRXS7_ARATH7.6e-3867.65Monothiol glutaredoxin-S7 OS=Arabidopsis thaliana GN=GRXS7 PE=3 SV=2[more]
BLAST of CmaCh08G012090 vs. TrEMBL
Match NameE-valueIdentityDescription
U3RJA0_CUCSA2.8e-4789.22Glutaredoxin OS=Cucumis sativus GN=GRX3 PE=2 SV=1[more]
D7LYE9_ARALL1.5e-4073.53Glutaredoxin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_48... [more]
A0A078EKR9_BRANA1.5e-4074.51BnaC02g08250D protein OS=Brassica napus GN=BnaC02g08250D PE=4 SV=1[more]
M4E4I5_BRARP1.9e-4074.51Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
V4LHG7_EUTSA2.5e-4074.51Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10015538mg PE=4 SV=1[more]
BLAST of CmaCh08G012090 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G18600.14.9e-4372.55 Thioredoxin superfamily protein[more]
AT4G15690.12.3e-4068.63 Thioredoxin superfamily protein[more]
AT4G15680.15.1e-4067.65 Thioredoxin superfamily protein[more]
AT4G15700.18.6e-4067.65 Thioredoxin superfamily protein[more]
AT4G15670.14.3e-3967.65 Thioredoxin superfamily protein[more]
BLAST of CmaCh08G012090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|566006172|ref|NP_001274383.1|4.0e-4789.22monothiol glutaredoxin-S2-like [Cucumis sativus][more]
gi|727563611|ref|XP_010454112.1|1.3e-4075.49PREDICTED: monothiol glutaredoxin-S2-like [Camelina sativa][more]
gi|951003839|ref|XP_014507713.1|1.6e-4075.49PREDICTED: monothiol glutaredoxin-S2-like [Vigna radiata var. radiata][more]
gi|727489185|ref|XP_010420636.1|1.6e-4074.51PREDICTED: monothiol glutaredoxin-S2 [Camelina sativa][more]
gi|297812045|ref|XP_002873906.1|2.1e-4073.53glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002109Glutaredoxin
IPR011905GlrX-like_pln_2
IPR012336Thioredoxin-like_fold
IPR014025Glutaredoxin_subgr
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0015035protein disulfide oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0022900 electron transport chain
cellular_component GO:0005623 cell
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G012090.1CmaCh08G012090.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 13..75
score: 1.0
IPR002109GlutaredoxinPROFILEPS51354GLUTAREDOXIN_2coord: 1..101
score: 22
IPR011905Glutaredoxin-like, plant IITIGRFAMsTIGR02189TIGR02189coord: 4..102
score: 1.0
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 2..102
score: 8.3
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 1..101
score: 2.96
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 72..85
score: 6.0E-6coord: 13..31
score: 6.0E-6coord: 58..71
score: 6.
NoneNo IPR availablePANTHERPTHR10168GLUTAREDOXINcoord: 1..102
score: 5.9
NoneNo IPR availablePANTHERPTHR10168:SF115MONOTHIOL GLUTAREDOXIN-S2-RELATEDcoord: 1..102
score: 5.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh08G012090Cucsa.172120Cucumber (Gy14) v1cgycmaB0489
CmaCh08G012090Cucsa.253440Cucumber (Gy14) v1cgycmaB0731
CmaCh08G012090Cla009323Watermelon (97103) v1cmawmB878
CmaCh08G012090Cla021716Watermelon (97103) v1cmawmB869
CmaCh08G012090Cla014691Watermelon (97103) v1cmawmB861
CmaCh08G012090Csa6G198280Cucumber (Chinese Long) v2cmacuB907
CmaCh08G012090Csa3G152090Cucumber (Chinese Long) v2cmacuB885
CmaCh08G012090MELO3C021350Melon (DHL92) v3.5.1cmameB816
CmaCh08G012090MELO3C006621Melon (DHL92) v3.5.1cmameB850
CmaCh08G012090ClCG06G005320Watermelon (Charleston Gray)cmawcgB804
CmaCh08G012090ClCG09G006310Watermelon (Charleston Gray)cmawcgB791
CmaCh08G012090CSPI03G14060Wild cucumber (PI 183967)cmacpiB903
CmaCh08G012090CSPI06G14890Wild cucumber (PI 183967)cmacpiB927
CmaCh08G012090CmoCh08G011830Cucurbita moschata (Rifu)cmacmoB912
CmaCh08G012090CmoCh06G014750Cucurbita moschata (Rifu)cmacmoB910
CmaCh08G012090CmoCh17G003000Cucurbita moschata (Rifu)cmacmoB887
CmaCh08G012090Lsi09G014080Bottle gourd (USVL1VR-Ls)cmalsiB811
CmaCh08G012090Cp4.1LG17g00960Cucurbita pepo (Zucchini)cmacpeB916
CmaCh08G012090Cp4.1LG17g00850Cucurbita pepo (Zucchini)cmacpeB915
CmaCh08G012090MELO3C021350.2Melon (DHL92) v3.6.1cmamedB914
CmaCh08G012090CsaV3_6G017360Cucumber (Chinese Long) v3cmacucB1076
CmaCh08G012090Cla97C06G114820Watermelon (97103) v2cmawmbB921
CmaCh08G012090Cla97C09G168850Watermelon (97103) v2cmawmbB945
CmaCh08G012090Bhi12G001853Wax gourdcmawgoB1098
CmaCh08G012090CsGy6G014770Cucumber (Gy14) v2cgybcmaB875
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh08G012090CmaCh17G003120Cucurbita maxima (Rimu)cmacmaB373
CmaCh08G012090CmaCh17G011200Cucurbita maxima (Rimu)cmacmaB391
CmaCh08G012090CmaCh06G014770Cucurbita maxima (Rimu)cmacmaB554
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh08G012090Cucumber (Chinese Long) v3cmacucB1049
CmaCh08G012090Watermelon (97103) v2cmawmbB914
CmaCh08G012090Wax gourdcmawgoB1107
CmaCh08G012090Cucurbita maxima (Rimu)cmacmaB298
CmaCh08G012090Cucurbita moschata (Rifu)cmacmoB883
CmaCh08G012090Watermelon (Charleston Gray)cmawcgB796
CmaCh08G012090Cucurbita pepo (Zucchini)cmacpeB895
CmaCh08G012090Cucurbita pepo (Zucchini)cmacpeB928
CmaCh08G012090Cucurbita pepo (Zucchini)cmacpeB931
CmaCh08G012090Bottle gourd (USVL1VR-Ls)cmalsiB834
CmaCh08G012090Cucumber (Gy14) v2cgybcmaB454
CmaCh08G012090Melon (DHL92) v3.6.1cmamedB950
CmaCh08G012090Silver-seed gourdcarcmaB0096
CmaCh08G012090Silver-seed gourdcarcmaB0458
CmaCh08G012090Silver-seed gourdcarcmaB0850
CmaCh08G012090Silver-seed gourdcarcmaB1156