Cucsa.253440 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.253440
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionGlutaredoxin family protein
Locationscaffold02229 : 2045692 .. 2046000 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGAGTTACAAGGTTGATTTCAGAGAGACCGGTAGTGATCTTTAGCAAAAGTACGTGTTGCATGAGTCACACTGTCATGAGGTTGTTGAGTGGCTTTGGAGTTAACCCAGCAGTGCACGAGCTAGATCAGATCTCGAGAGGTAGAGAAGTCGAGCAAGCTCTCTCTAGGCTCGGATTCAACCCTACAGTTCCAGCTGTCTTCATTGGTGGTGAATTAGTTGGTGGTGCTAATGAAGTCATGAGTCTTCACCTTAATCGATCTCTAATTCCCATGCTTAGAAAAGCTGGTGCTTTATGGGTTTGA

mRNA sequence

ATGGATAGAGTTACAAGGTTGATTTCAGAGAGACCGGTAGTGATCTTTAGCAAAAGTACGTGTTGCATGAGTCACACTGTCATGAGGTTGTTGAGTGGCTTTGGAGTTAACCCAGCAGTGCACGAGCTAGATCAGATCTCGAGAGGTAGAGAAGTCGAGCAAGCTCTCTCTAGGCTCGGATTCAACCCTACAGTTCCAGCTGTCTTCATTGGTGGTGAATTAGTTGGTGGTGCTAATGAAGTCATGAGTCTTCACCTTAATCGATCTCTAATTCCCATGCTTAGAAAAGCTGGTGCTTTATGGGTTTGA

Coding sequence (CDS)

ATGGATAGAGTTACAAGGTTGATTTCAGAGAGACCGGTAGTGATCTTTAGCAAAAGTACGTGTTGCATGAGTCACACTGTCATGAGGTTGTTGAGTGGCTTTGGAGTTAACCCAGCAGTGCACGAGCTAGATCAGATCTCGAGAGGTAGAGAAGTCGAGCAAGCTCTCTCTAGGCTCGGATTCAACCCTACAGTTCCAGCTGTCTTCATTGGTGGTGAATTAGTTGGTGGTGCTAATGAAGTCATGAGTCTTCACCTTAATCGATCTCTAATTCCCATGCTTAGAAAAGCTGGTGCTTTATGGGTTTGA

Protein sequence

MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLGFNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV*
Homology
[Close]
BLAST of Cucsa.253440 vs. Swiss-Prot
Match: GRXS2_ARATH (Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana GN=GRXS2 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-39
Identity = 77/102 (75.49%), Postives = 90/102 (88.24%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           MD +T+++ ERPVVI+SKS+CCMSHT+  LL  FG NPAV+ELD+ISRGRE+EQAL RLG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            +P VP VFIGGELVGGANEVMSLHLN SLIPML++AGALWV
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]
BLAST of Cucsa.253440 vs. Swiss-Prot
Match: GRXS4_ARATH (Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana GN=GRXS4 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 8.5e-37
Identity = 68/102 (66.67%), Postives = 91/102 (89.22%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           MD++ ++ISE+ VVIFSK++CCMSHT+  L   FGVNP ++ELD+I+RG+E+EQAL++LG
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            +PTVP VFIGG+LVGGAN+VMSLHLNRSL+PML++ GALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]
BLAST of Cucsa.253440 vs. Swiss-Prot
Match: GRXS5_ARATH (Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana GN=GRXS5 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 5.5e-36
Identity = 68/102 (66.67%), Postives = 90/102 (88.24%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           M+ + ++ISE+ VVIFSK++CCMSHT+  L   FGVNP ++ELD+I+ GRE+EQAL++LG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            +PTVP VFIGG+LVGGAN+VMSLHLNRSL+PML++AGALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]
BLAST of Cucsa.253440 vs. Swiss-Prot
Match: GRXS3_ARATH (Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana GN=GRXS3 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.2e-35
Identity = 67/102 (65.69%), Postives = 89/102 (87.25%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           M+ + ++ISE+ VVIFSK++CCMSHT+  L    GVNP ++ELD+ISRG+E+E AL++LG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            +PTVP VFIGG+LVGGAN+VMSLHLNRSL+PML++AGALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]
BLAST of Cucsa.253440 vs. Swiss-Prot
Match: GRXS7_ARATH (Monothiol glutaredoxin-S7 OS=Arabidopsis thaliana GN=GRXS7 PE=3 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 8.0e-35
Identity = 65/102 (63.73%), Postives = 89/102 (87.25%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           M+++ ++ SE+ +VIFSK++CCMSHT+  L    GVNP ++ELD+I+RG+E+EQAL++LG
Sbjct: 1   MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            +PTVP VFIGG+LVGGAN+VMSLHLNRSLIPML++ GALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102

[Close]
BLAST of Cucsa.253440 vs. TrEMBL
Match: A0A0A0L8Y9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G152090 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 8.0e-50
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG
Sbjct: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
           FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV
Sbjct: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 102

[Close]
BLAST of Cucsa.253440 vs. TrEMBL
Match: I1MRF6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G023900 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 6.8e-41
Identity = 83/102 (81.37%), Postives = 95/102 (93.14%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           M+RVT+++SERPVVIFSKS+CCMSHT+  LL  FGVNPAVHELD+I RGR++EQALSRLG
Sbjct: 1   MERVTKMVSERPVVIFSKSSCCMSHTIKTLLCDFGVNPAVHELDEIPRGRDIEQALSRLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            +P+VPAVFI GELVGGANEVMSLHLNRSLIPML+KAGALWV
Sbjct: 61  CSPSVPAVFISGELVGGANEVMSLHLNRSLIPMLKKAGALWV 102

[Close]
BLAST of Cucsa.253440 vs. TrEMBL
Match: A0A0B2P756_GLYSO (Monothiol glutaredoxin-S2 OS=Glycine soja GN=glysoja_004410 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 6.8e-41
Identity = 83/102 (81.37%), Postives = 95/102 (93.14%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           M+RVT+++SERPVVIFSKS+CCMSHT+  LL  FGVNPAVHELD+I RGR++EQALSRLG
Sbjct: 1   MERVTKMVSERPVVIFSKSSCCMSHTIKTLLCDFGVNPAVHELDEIPRGRDIEQALSRLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            +P+VPAVFI GELVGGANEVMSLHLNRSLIPML+KAGALWV
Sbjct: 61  CSPSVPAVFISGELVGGANEVMSLHLNRSLIPMLKKAGALWV 102

[Close]
BLAST of Cucsa.253440 vs. TrEMBL
Match: A0A151STF3_CAJCA (Monothiol glutaredoxin-S2 OS=Cajanus cajan GN=KK1_004347 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.2e-40
Identity = 83/102 (81.37%), Postives = 94/102 (92.16%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           MDRVT+++SER VVIFSKS+CCMSHT+  L   FGVNPAVHELD+I RGR++EQALSRLG
Sbjct: 64  MDRVTKMVSERAVVIFSKSSCCMSHTIKTLFCDFGVNPAVHELDEIPRGRDIEQALSRLG 123

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            +P+VPAVFIGGELVGGANEVMSLHLNRSLIPML+KAGALWV
Sbjct: 124 CSPSVPAVFIGGELVGGANEVMSLHLNRSLIPMLKKAGALWV 165

[Close]
BLAST of Cucsa.253440 vs. TrEMBL
Match: A0A0D2VNY3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G187400 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.5e-40
Identity = 83/102 (81.37%), Postives = 92/102 (90.20%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           M+RVT+L SE+PVVIFSKS+CCMSHT+  L   FGVNPAVHELD+ISRGRE+EQ LSRLG
Sbjct: 1   MERVTKLASEKPVVIFSKSSCCMSHTIKTLFYDFGVNPAVHELDEISRGREIEQTLSRLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            NP+VPAVFIGGE VGGANEVMSLHLNRSLIPMLR+ GALWV
Sbjct: 61  CNPSVPAVFIGGEFVGGANEVMSLHLNRSLIPMLRRVGALWV 102

[Close]
BLAST of Cucsa.253440 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein)

HSP 1 Score: 163.7 bits (413), Expect = 6.0e-41
Identity = 77/102 (75.49%), Postives = 90/102 (88.24%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           MD +T+++ ERPVVI+SKS+CCMSHT+  LL  FG NPAV+ELD+ISRGRE+EQAL RLG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            +P VP VFIGGELVGGANEVMSLHLN SLIPML++AGALWV
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]
BLAST of Cucsa.253440 vs. TAIR10
Match: AT4G15680.1 (AT4G15680.1 Thioredoxin superfamily protein)

HSP 1 Score: 154.1 bits (388), Expect = 4.8e-38
Identity = 68/102 (66.67%), Postives = 91/102 (89.22%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           MD++ ++ISE+ VVIFSK++CCMSHT+  L   FGVNP ++ELD+I+RG+E+EQAL++LG
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            +PTVP VFIGG+LVGGAN+VMSLHLNRSL+PML++ GALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]
BLAST of Cucsa.253440 vs. TAIR10
Match: AT4G15690.1 (AT4G15690.1 Thioredoxin superfamily protein)

HSP 1 Score: 151.4 bits (381), Expect = 3.1e-37
Identity = 68/102 (66.67%), Postives = 90/102 (88.24%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           M+ + ++ISE+ VVIFSK++CCMSHT+  L   FGVNP ++ELD+I+ GRE+EQAL++LG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            +PTVP VFIGG+LVGGAN+VMSLHLNRSL+PML++AGALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]
BLAST of Cucsa.253440 vs. TAIR10
Match: AT4G15700.1 (AT4G15700.1 Thioredoxin superfamily protein)

HSP 1 Score: 150.2 bits (378), Expect = 6.9e-37
Identity = 67/102 (65.69%), Postives = 89/102 (87.25%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           M+ + ++ISE+ VVIFSK++CCMSHT+  L    GVNP ++ELD+ISRG+E+E AL++LG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            +PTVP VFIGG+LVGGAN+VMSLHLNRSL+PML++AGALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]
BLAST of Cucsa.253440 vs. TAIR10
Match: AT4G15670.1 (AT4G15670.1 Thioredoxin superfamily protein)

HSP 1 Score: 147.5 bits (371), Expect = 4.5e-36
Identity = 65/102 (63.73%), Postives = 89/102 (87.25%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           M+++ ++ SE+ +VIFSK++CCMSHT+  L    GVNP ++ELD+I+RG+E+EQAL++LG
Sbjct: 1   MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            +PTVP VFIGG+LVGGAN+VMSLHLNRSLIPML++ GALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102

[Close]
BLAST of Cucsa.253440 vs. NCBI nr
Match: gi|449432817|ref|XP_004134195.1| (PREDICTED: monothiol glutaredoxin-S2 [Cucumis sativus])

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-49
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG
Sbjct: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
           FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV
Sbjct: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 102

[Close]
BLAST of Cucsa.253440 vs. NCBI nr
Match: gi|1012003897|ref|XP_015938975.1| (PREDICTED: monothiol glutaredoxin-S2-like [Arachis duranensis])

HSP 1 Score: 176.8 bits (447), Expect = 2.0e-41
Identity = 84/102 (82.35%), Postives = 93/102 (91.18%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           MDRVT+L+SERPVVIFS+STCCM HT+  L   FGVNPAVHELD+I RGR++EQALSRLG
Sbjct: 1   MDRVTKLVSERPVVIFSRSTCCMCHTIKTLFCDFGVNPAVHELDEIQRGRDIEQALSRLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            NP+VPAVFIGGELVGG NEVMSLHLNRSLIPML+KAGALWV
Sbjct: 61  CNPSVPAVFIGGELVGGTNEVMSLHLNRSLIPMLKKAGALWV 102

[Close]
BLAST of Cucsa.253440 vs. NCBI nr
Match: gi|356563857|ref|XP_003550174.1| (PREDICTED: monothiol glutaredoxin-S2 [Glycine max])

HSP 1 Score: 174.5 bits (441), Expect = 9.7e-41
Identity = 83/102 (81.37%), Postives = 95/102 (93.14%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           M+RVT+++SERPVVIFSKS+CCMSHT+  LL  FGVNPAVHELD+I RGR++EQALSRLG
Sbjct: 1   MERVTKMVSERPVVIFSKSSCCMSHTIKTLLCDFGVNPAVHELDEIPRGRDIEQALSRLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            +P+VPAVFI GELVGGANEVMSLHLNRSLIPML+KAGALWV
Sbjct: 61  CSPSVPAVFISGELVGGANEVMSLHLNRSLIPMLKKAGALWV 102

[Close]
BLAST of Cucsa.253440 vs. NCBI nr
Match: gi|1012346864|gb|KYP58056.1| (Monothiol glutaredoxin-S2 [Cajanus cajan])

HSP 1 Score: 173.7 bits (439), Expect = 1.7e-40
Identity = 83/102 (81.37%), Postives = 94/102 (92.16%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           MDRVT+++SER VVIFSKS+CCMSHT+  L   FGVNPAVHELD+I RGR++EQALSRLG
Sbjct: 64  MDRVTKMVSERAVVIFSKSSCCMSHTIKTLFCDFGVNPAVHELDEIPRGRDIEQALSRLG 123

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            +P+VPAVFIGGELVGGANEVMSLHLNRSLIPML+KAGALWV
Sbjct: 124 CSPSVPAVFIGGELVGGANEVMSLHLNRSLIPMLKKAGALWV 165

[Close]
BLAST of Cucsa.253440 vs. NCBI nr
Match: gi|823240821|ref|XP_012453018.1| (PREDICTED: monothiol glutaredoxin-S2-like [Gossypium raimondii])

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-40
Identity = 83/102 (81.37%), Postives = 92/102 (90.20%), Query Frame = 1 

Query: 1   MDRVTRLISERPVVIFSKSTCCMSHTVMRLLSGFGVNPAVHELDQISRGREVEQALSRLG 60
           M+RVT+L SE+PVVIFSKS+CCMSHT+  L   FGVNPAVHELD+ISRGRE+EQ LSRLG
Sbjct: 1   MERVTKLASEKPVVIFSKSSCCMSHTIKTLFYDFGVNPAVHELDEISRGREIEQTLSRLG 60

Query: 61  FNPTVPAVFIGGELVGGANEVMSLHLNRSLIPMLRKAGALWV 103
            NP+VPAVFIGGE VGGANEVMSLHLNRSLIPMLR+ GALWV
Sbjct: 61  CNPSVPAVFIGGEFVGGANEVMSLHLNRSLIPMLRRVGALWV 102

The following BLAST results are available for this feature:
BLAST of Cucsa.253440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GRXS2_ARATH1.1e-3975.49Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana GN=GRXS2 PE=3 SV=1[more]
GRXS4_ARATH8.5e-3766.67Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana GN=GRXS4 PE=3 SV=1[more]
GRXS5_ARATH5.5e-3666.67Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana GN=GRXS5 PE=3 SV=1[more]
GRXS3_ARATH1.2e-3565.69Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana GN=GRXS3 PE=3 SV=1[more]
GRXS7_ARATH8.0e-3563.73Monothiol glutaredoxin-S7 OS=Arabidopsis thaliana GN=GRXS7 PE=3 SV=2[more]
BLAST of Cucsa.253440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8Y9_CUCSA8.0e-50100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G152090 PE=4 SV=1[more]
I1MRF6_SOYBN6.8e-4181.37Uncharacterized protein OS=Glycine max GN=GLYMA_17G023900 PE=4 SV=1[more]
A0A0B2P756_GLYSO6.8e-4181.37Monothiol glutaredoxin-S2 OS=Glycine soja GN=glysoja_004410 PE=4 SV=1[more]
A0A151STF3_CAJCA1.2e-4081.37Monothiol glutaredoxin-S2 OS=Cajanus cajan GN=KK1_004347 PE=4 SV=1[more]
A0A0D2VNY3_GOSRA1.5e-4081.37Uncharacterized protein OS=Gossypium raimondii GN=B456_011G187400 PE=4 SV=1[more]
BLAST of Cucsa.253440 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G18600.16.0e-4175.49 Thioredoxin superfamily protein[more]
AT4G15680.14.8e-3866.67 Thioredoxin superfamily protein[more]
AT4G15690.13.1e-3766.67 Thioredoxin superfamily protein[more]
AT4G15700.16.9e-3765.69 Thioredoxin superfamily protein[more]
AT4G15670.14.5e-3663.73 Thioredoxin superfamily protein[more]
BLAST of Cucsa.253440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432817|ref|XP_004134195.1|1.1e-49100.00PREDICTED: monothiol glutaredoxin-S2 [Cucumis sativus][more]
gi|1012003897|ref|XP_015938975.1|2.0e-4182.35PREDICTED: monothiol glutaredoxin-S2-like [Arachis duranensis][more]
gi|356563857|ref|XP_003550174.1|9.7e-4181.37PREDICTED: monothiol glutaredoxin-S2 [Glycine max][more]
gi|1012346864|gb|KYP58056.1|1.7e-4081.37Monothiol glutaredoxin-S2 [Cajanus cajan][more]
gi|823240821|ref|XP_012453018.1|2.2e-4081.37PREDICTED: monothiol glutaredoxin-S2-like [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002109Glutaredoxin
IPR011905GlrX-like_pln_2
IPR012336Thioredoxin-like_fold
IPR014025Glutaredoxin_subgr
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0015035protein disulfide oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005623 cell
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.253440.1Cucsa.253440.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 13..75
score: 1.8
IPR002109GlutaredoxinPROFILEPS51354GLUTAREDOXIN_2coord: 1..101
score: 24
IPR011905Glutaredoxin-like, plant IITIGRFAMsTIGR02189TIGR02189coord: 4..102
score: 2.9
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 3..102
score: 1.1
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 1..101
score: 1.29
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 58..71
score: 3.8E-7coord: 72..85
score: 3.8E-7coord: 13..31
score: 3.
NoneNo IPR availablePANTHERPTHR10168GLUTAREDOXINcoord: 1..102
score: 5.7
NoneNo IPR availablePANTHERPTHR10168:SF115MONOTHIOL GLUTAREDOXIN-S2-RELATEDcoord: 1..102
score: 5.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.253440Cla021715Watermelon (97103) v1cgywmB479
Cucsa.253440Cla009323Watermelon (97103) v1cgywmB483
Cucsa.253440Csa6G198280Cucumber (Chinese Long) v2cgycuB373
Cucsa.253440Csa3G152080Cucumber (Chinese Long) v2cgycuB366
Cucsa.253440MELO3C006620Melon (DHL92) v3.5.1cgymeB439
Cucsa.253440MELO3C021351Melon (DHL92) v3.5.1cgymeB430
Cucsa.253440ClCG06G005320Watermelon (Charleston Gray)cgywcgB453
Cucsa.253440CSPI03G14050Wild cucumber (PI 183967)cgycpiB383
Cucsa.253440CSPI06G14890Wild cucumber (PI 183967)cgycpiB392
Cucsa.253440CmaCh06G014760Cucurbita maxima (Rimu)cgycmaB0727
Cucsa.253440CmaCh17G003120Cucurbita maxima (Rimu)cgycmaB0714
Cucsa.253440CmaCh08G012090Cucurbita maxima (Rimu)cgycmaB0731
Cucsa.253440CmoCh14G016750Cucurbita moschata (Rifu)cgycmoB0700
Cucsa.253440CmoCh08G011830Cucurbita moschata (Rifu)cgycmoB0720
Cucsa.253440CmoCh17G003000Cucurbita moschata (Rifu)cgycmoB0707
Cucsa.253440Lsi05G015130Bottle gourd (USVL1VR-Ls)cgylsiB420
Cucsa.253440Lsi09G014080Bottle gourd (USVL1VR-Ls)cgylsiB412
Cucsa.253440Cp4.1LG12g02540Cucurbita pepo (Zucchini)cgycpeB0671
Cucsa.253440Cp4.1LG17g00960Cucurbita pepo (Zucchini)cgycpeB0676
Cucsa.253440Cp4.1LG17g00850Cucurbita pepo (Zucchini)cgycpeB0678
Cucsa.253440Cp4.1LG08g04750Cucurbita pepo (Zucchini)cgycpeB0687
Cucsa.253440MELO3C021351.2Melon (DHL92) v3.6.1cgymedB425
Cucsa.253440MELO3C006620.2Melon (DHL92) v3.6.1cgymedB432
Cucsa.253440CsaV3_6G017360Cucumber (Chinese Long) v3cgycucB397
Cucsa.253440CsaV3_3G014270Cucumber (Chinese Long) v3cgycucB387
Cucsa.253440Cla97C05G087350Watermelon (97103) v2cgywmbB452
Cucsa.253440Cla97C06G114820Watermelon (97103) v2cgywmbB453
Cucsa.253440Bhi12G001853Wax gourdcgywgoB505
Cucsa.253440Bhi01G000689Wax gourdcgywgoB522
Cucsa.253440Carg07198Silver-seed gourdcarcgyB0133
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cucsa.253440Cucsa.172110Cucumber (Gy14) v1cgycgyB108
The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.253440Cucurbita maxima (Rimu)cgycmaB0713
Cucsa.253440Cucurbita maxima (Rimu)cgycmaB0709
Cucsa.253440Cucurbita moschata (Rifu)cgycmoB0718
Cucsa.253440Watermelon (Charleston Gray)cgywcgB451
Cucsa.253440Cucurbita pepo (Zucchini)cgycpeB0669
Cucsa.253440Cucurbita pepo (Zucchini)cgycpeB0682
Cucsa.253440Silver-seed gourdcarcgyB0083
Cucsa.253440Silver-seed gourdcarcgyB0383
Cucsa.253440Silver-seed gourdcarcgyB0681
Cucsa.253440Silver-seed gourdcarcgyB0960