CSPI06G14890 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G14890
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionGlutaredoxin
LocationChr6 : 12971825 .. 12972355 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCCTTCTTCATTCCTCACTTCATTCTCAACCATTTTCTTCTTCTATTTCCTTCTCTGTTTTCTTAACCTCTCAAACTACATATACAATGGAGACTGTCAACAAGTTGGTTTCTGATAGGCCGGTGGTAGTTTTCAGCAAGAATAGTTGCTGTATGAGCCACTCTATCAAGACACTCTTGTGTGATTTCGGAGTTAACCCGACGGTGTACGAGCTCGATGAGCTTCCCAGAGGGAAAGAGATAGAGCAAGCTCTTCTTCGGATTGGCTGTAATCCTGCCGTACCTGCCGTGTTCATTGGTGGGGAACTGGTCGGTGGTGCTAACGAAGTCATGAGTCTTCATCTTAAGCGAAACCTGATCCCAATGCTTAGGAAGGCCGGTGCTCTATGGGTTTAAACCTTCTTGCTCCCTAACTTGATGTAACTTTGACATAGCCAAGCTTTCCTATAATATATATATATAGGCAGAAATGGCACAGAGAGTTTACTTAAAAAAGTCTTTATGTAAAGTCCTTTTTTGGTGACTTCAAT

mRNA sequence

ATGGAGACTGTCAACAAGTTGGTTTCTGATAGGCCGGTGGTAGTTTTCAGCAAGAATAGTTGCTGTATGAGCCACTCTATCAAGACACTCTTGTGTGATTTCGGAGTTAACCCGACGGTGTACGAGCTCGATGAGCTTCCCAGAGGGAAAGAGATAGAGCAAGCTCTTCTTCGGATTGGCTGTAATCCTGCCGTACCTGCCGTGTTCATTGGTGGGGAACTGGTCGGTGGTGCTAACGAAGTCATGAGTCTTCATCTTAAGCGAAACCTGATCCCAATGCTTAGGAAGGCCGGTGCTCTATGGGTTTAA

Coding sequence (CDS)

ATGGAGACTGTCAACAAGTTGGTTTCTGATAGGCCGGTGGTAGTTTTCAGCAAGAATAGTTGCTGTATGAGCCACTCTATCAAGACACTCTTGTGTGATTTCGGAGTTAACCCGACGGTGTACGAGCTCGATGAGCTTCCCAGAGGGAAAGAGATAGAGCAAGCTCTTCTTCGGATTGGCTGTAATCCTGCCGTACCTGCCGTGTTCATTGGTGGGGAACTGGTCGGTGGTGCTAACGAAGTCATGAGTCTTCATCTTAAGCGAAACCTGATCCCAATGCTTAGGAAGGCCGGTGCTCTATGGGTTTAA
Homology
[Close]
BLAST of CSPI06G14890 vs. Swiss-Prot
Match: GRXS2_ARATH (Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana GN=GRXS2 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.1e-43
Identity = 78/102 (76.47%), Postives = 93/102 (91.18%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           M+ + K+V +RPVV++SK+SCCMSH+IKTLLCDFG NP VYELDE+ RG+EIEQALLR+G
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+PAVP VFIGGELVGGANEVMSLHL  +LIPML++AGALWV
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]
BLAST of CSPI06G14890 vs. Swiss-Prot
Match: GRXS4_ARATH (Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana GN=GRXS4 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.7e-40
Identity = 71/102 (69.61%), Postives = 91/102 (89.22%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           M+ + K++S++ VV+FSKNSCCMSH+IKTL  DFGVNPT+YELDE+ RGKEIEQAL ++G
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P VP VFIGG+LVGGAN+VMSLHL R+L+PML++ GALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]
BLAST of CSPI06G14890 vs. Swiss-Prot
Match: GRXS3_ARATH (Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana GN=GRXS3 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 2.8e-40
Identity = 71/102 (69.61%), Postives = 90/102 (88.24%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           ME + K++S++ VV+FSKNSCCMSH+IKTL  D GVNPT+YELDE+ RGKEIE AL ++G
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P VP VFIGG+LVGGAN+VMSLHL R+L+PML++AGALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]
BLAST of CSPI06G14890 vs. Swiss-Prot
Match: GRXS5_ARATH (Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana GN=GRXS5 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.7e-40
Identity = 71/102 (69.61%), Postives = 91/102 (89.22%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           ME + K++S++ VV+FSKNSCCMSH+IKTL  DFGVNPT+YELDE+  G+EIEQAL ++G
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P VP VFIGG+LVGGAN+VMSLHL R+L+PML++AGALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]
BLAST of CSPI06G14890 vs. Swiss-Prot
Match: GRXS7_ARATH (Monothiol glutaredoxin-S7 OS=Arabidopsis thaliana GN=GRXS7 PE=3 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 1.4e-39
Identity = 71/102 (69.61%), Postives = 89/102 (87.25%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           ME + K+ S++ +V+FSKNSCCMSH+IKTL  D GVNPT+YELDE+ RGKEIEQAL ++G
Sbjct: 1   MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P VP VFIGG+LVGGAN+VMSLHL R+LIPML++ GALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102

[Close]
BLAST of CSPI06G14890 vs. TrEMBL
Match: U3RJA0_CUCSA (Glutaredoxin OS=Cucumis sativus GN=GRX3 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.2e-52
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG
Sbjct: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV
Sbjct: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 102

[Close]
BLAST of CSPI06G14890 vs. TrEMBL
Match: A0A0S3R9B9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G525700 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.2e-43
Identity = 81/102 (79.41%), Postives = 97/102 (95.10%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           M+ VNK+VS+RPVV+FSK+SCCMSH+IKTL CDFGVNP V+ELDE+PRG++IEQAL R+G
Sbjct: 1   MDRVNKMVSERPVVIFSKSSCCMSHTIKTLFCDFGVNPLVHELDEIPRGRDIEQALSRLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P++PAVFIGGELVGGANEVMSLHL R+LIPML+KAGALWV
Sbjct: 61  CSPSLPAVFIGGELVGGANEVMSLHLDRSLIPMLKKAGALWV 102

[Close]
BLAST of CSPI06G14890 vs. TrEMBL
Match: I1MRF6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G023900 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.2e-43
Identity = 82/102 (80.39%), Postives = 96/102 (94.12%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           ME V K+VS+RPVV+FSK+SCCMSH+IKTLLCDFGVNP V+ELDE+PRG++IEQAL R+G
Sbjct: 1   MERVTKMVSERPVVIFSKSSCCMSHTIKTLLCDFGVNPAVHELDEIPRGRDIEQALSRLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P+VPAVFI GELVGGANEVMSLHL R+LIPML+KAGALWV
Sbjct: 61  CSPSVPAVFISGELVGGANEVMSLHLNRSLIPMLKKAGALWV 102

[Close]
BLAST of CSPI06G14890 vs. TrEMBL
Match: A0A0B2P756_GLYSO (Monothiol glutaredoxin-S2 OS=Glycine soja GN=glysoja_004410 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.2e-43
Identity = 82/102 (80.39%), Postives = 96/102 (94.12%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           ME V K+VS+RPVV+FSK+SCCMSH+IKTLLCDFGVNP V+ELDE+PRG++IEQAL R+G
Sbjct: 1   MERVTKMVSERPVVIFSKSSCCMSHTIKTLLCDFGVNPAVHELDEIPRGRDIEQALSRLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P+VPAVFI GELVGGANEVMSLHL R+LIPML+KAGALWV
Sbjct: 61  CSPSVPAVFISGELVGGANEVMSLHLNRSLIPMLKKAGALWV 102

[Close]
BLAST of CSPI06G14890 vs. TrEMBL
Match: A0A0L9TSM9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g309600 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.2e-43
Identity = 81/102 (79.41%), Postives = 97/102 (95.10%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           M+ VNK+VS+RPVV+FSK+SCCMSH+IKTL CDFGVNP V+ELDE+PRG++IEQAL R+G
Sbjct: 1   MDRVNKMVSERPVVIFSKSSCCMSHTIKTLFCDFGVNPLVHELDEIPRGRDIEQALSRLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P++PAVFIGGELVGGANEVMSLHL R+LIPML+KAGALWV
Sbjct: 61  CSPSLPAVFIGGELVGGANEVMSLHLDRSLIPMLKKAGALWV 102

[Close]
BLAST of CSPI06G14890 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein)

HSP 1 Score: 176.0 bits (445), Expect = 1.2e-44
Identity = 78/102 (76.47%), Postives = 93/102 (91.18%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           M+ + K+V +RPVV++SK+SCCMSH+IKTLLCDFG NP VYELDE+ RG+EIEQALLR+G
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+PAVP VFIGGELVGGANEVMSLHL  +LIPML++AGALWV
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]
BLAST of CSPI06G14890 vs. TAIR10
Match: AT4G15680.1 (AT4G15680.1 Thioredoxin superfamily protein)

HSP 1 Score: 166.4 bits (420), Expect = 9.3e-42
Identity = 71/102 (69.61%), Postives = 91/102 (89.22%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           M+ + K++S++ VV+FSKNSCCMSH+IKTL  DFGVNPT+YELDE+ RGKEIEQAL ++G
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P VP VFIGG+LVGGAN+VMSLHL R+L+PML++ GALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]
BLAST of CSPI06G14890 vs. TAIR10
Match: AT4G15700.1 (AT4G15700.1 Thioredoxin superfamily protein)

HSP 1 Score: 165.6 bits (418), Expect = 1.6e-41
Identity = 71/102 (69.61%), Postives = 90/102 (88.24%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           ME + K++S++ VV+FSKNSCCMSH+IKTL  D GVNPT+YELDE+ RGKEIE AL ++G
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P VP VFIGG+LVGGAN+VMSLHL R+L+PML++AGALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]
BLAST of CSPI06G14890 vs. TAIR10
Match: AT4G15690.1 (AT4G15690.1 Thioredoxin superfamily protein)

HSP 1 Score: 165.2 bits (417), Expect = 2.1e-41
Identity = 71/102 (69.61%), Postives = 91/102 (89.22%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           ME + K++S++ VV+FSKNSCCMSH+IKTL  DFGVNPT+YELDE+  G+EIEQAL ++G
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P VP VFIGG+LVGGAN+VMSLHL R+L+PML++AGALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]
BLAST of CSPI06G14890 vs. TAIR10
Match: AT4G15670.1 (AT4G15670.1 Thioredoxin superfamily protein)

HSP 1 Score: 163.3 bits (412), Expect = 7.9e-41
Identity = 71/102 (69.61%), Postives = 89/102 (87.25%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           ME + K+ S++ +V+FSKNSCCMSH+IKTL  D GVNPT+YELDE+ RGKEIEQAL ++G
Sbjct: 1   MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P VP VFIGG+LVGGAN+VMSLHL R+LIPML++ GALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102

[Close]
BLAST of CSPI06G14890 vs. NCBI nr
Match: gi|566006172|ref|NP_001274383.1| (monothiol glutaredoxin-S2-like [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-52
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG
Sbjct: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV
Sbjct: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 102

[Close]
BLAST of CSPI06G14890 vs. NCBI nr
Match: gi|657996709|ref|XP_008390722.1| (PREDICTED: monothiol glutaredoxin-S2 [Malus domestica])

HSP 1 Score: 184.9 bits (468), Expect = 7.2e-44
Identity = 84/102 (82.35%), Postives = 94/102 (92.16%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           ME V K+ S+RPVV+FSK+SCCMSHSIKTLLCDFGVNP VYELDE+ RG+EIEQAL R+G
Sbjct: 1   MEAVTKMASERPVVIFSKSSCCMSHSIKTLLCDFGVNPAVYELDEMQRGREIEQALSRLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           CNP VPAVFIGGELVGGANEVMSLHLKR+LIPML++ GALWV
Sbjct: 61  CNPTVPAVFIGGELVGGANEVMSLHLKRSLIPMLKRVGALWV 102

[Close]
BLAST of CSPI06G14890 vs. NCBI nr
Match: gi|951003839|ref|XP_014507713.1| (PREDICTED: monothiol glutaredoxin-S2-like [Vigna radiata var. radiata])

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-43
Identity = 83/102 (81.37%), Postives = 97/102 (95.10%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           M+ VNK+VS+RPVV+FSK+SCCMSH+IKTL CDFGVNP V+ELDE+PRG+EIEQAL R+G
Sbjct: 1   MDRVNKMVSERPVVIFSKSSCCMSHTIKTLFCDFGVNPLVHELDEIPRGREIEQALSRLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P+VPAVFIGGELVGGANEVMSLHL R+LIPML+KAGALWV
Sbjct: 61  CSPSVPAVFIGGELVGGANEVMSLHLDRSLIPMLKKAGALWV 102

[Close]
BLAST of CSPI06G14890 vs. NCBI nr
Match: gi|694322177|ref|XP_009352227.1| (PREDICTED: monothiol glutaredoxin-S2 [Pyrus x bretschneideri])

HSP 1 Score: 182.2 bits (461), Expect = 4.7e-43
Identity = 83/102 (81.37%), Postives = 93/102 (91.18%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           ME V K+ S+RPVV+FSK+SCC+SHSIKTLLCDFGVNP VYELDE+ RG+EIEQAL R+G
Sbjct: 1   MEAVTKMASERPVVIFSKSSCCISHSIKTLLCDFGVNPAVYELDEMQRGREIEQALSRLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           CNP VPAVFIGGELVGGANEVMSLHLKR+LIPML + GALWV
Sbjct: 61  CNPTVPAVFIGGELVGGANEVMSLHLKRSLIPMLMRVGALWV 102

[Close]
BLAST of CSPI06G14890 vs. NCBI nr
Match: gi|920689557|gb|KOM33540.1| (hypothetical protein LR48_Vigan01g309600 [Vigna angularis])

HSP 1 Score: 181.8 bits (460), Expect = 6.1e-43
Identity = 81/102 (79.41%), Postives = 97/102 (95.10%), Query Frame = 1 

Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           M+ VNK+VS+RPVV+FSK+SCCMSH+IKTL CDFGVNP V+ELDE+PRG++IEQAL R+G
Sbjct: 1   MDRVNKMVSERPVVIFSKSSCCMSHTIKTLFCDFGVNPLVHELDEIPRGRDIEQALSRLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P++PAVFIGGELVGGANEVMSLHL R+LIPML+KAGALWV
Sbjct: 61  CSPSLPAVFIGGELVGGANEVMSLHLDRSLIPMLKKAGALWV 102

The following BLAST results are available for this feature:
BLAST of CSPI06G14890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GRXS2_ARATH2.1e-4376.47Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana GN=GRXS2 PE=3 SV=1[more]
GRXS4_ARATH1.7e-4069.61Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana GN=GRXS4 PE=3 SV=1[more]
GRXS3_ARATH2.8e-4069.61Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana GN=GRXS3 PE=3 SV=1[more]
GRXS5_ARATH3.7e-4069.61Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana GN=GRXS5 PE=3 SV=1[more]
GRXS7_ARATH1.4e-3969.61Monothiol glutaredoxin-S7 OS=Arabidopsis thaliana GN=GRXS7 PE=3 SV=2[more]
BLAST of CSPI06G14890 vs. TrEMBL
Match NameE-valueIdentityDescription
U3RJA0_CUCSA2.2e-52100.00Glutaredoxin OS=Cucumis sativus GN=GRX3 PE=2 SV=1[more]
A0A0S3R9B9_PHAAN4.2e-4379.41Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G525700 PE=... [more]
I1MRF6_SOYBN4.2e-4380.39Uncharacterized protein OS=Glycine max GN=GLYMA_17G023900 PE=4 SV=1[more]
A0A0B2P756_GLYSO4.2e-4380.39Monothiol glutaredoxin-S2 OS=Glycine soja GN=glysoja_004410 PE=4 SV=1[more]
A0A0L9TSM9_PHAAN4.2e-4379.41Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g309600 PE=4 SV=1[more]
BLAST of CSPI06G14890 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G18600.11.2e-4476.47 Thioredoxin superfamily protein[more]
AT4G15680.19.3e-4269.61 Thioredoxin superfamily protein[more]
AT4G15700.11.6e-4169.61 Thioredoxin superfamily protein[more]
AT4G15690.12.1e-4169.61 Thioredoxin superfamily protein[more]
AT4G15670.17.9e-4169.61 Thioredoxin superfamily protein[more]
BLAST of CSPI06G14890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|566006172|ref|NP_001274383.1|3.2e-52100.00monothiol glutaredoxin-S2-like [Cucumis sativus][more]
gi|657996709|ref|XP_008390722.1|7.2e-4482.35PREDICTED: monothiol glutaredoxin-S2 [Malus domestica][more]
gi|951003839|ref|XP_014507713.1|1.2e-4381.37PREDICTED: monothiol glutaredoxin-S2-like [Vigna radiata var. radiata][more]
gi|694322177|ref|XP_009352227.1|4.7e-4381.37PREDICTED: monothiol glutaredoxin-S2 [Pyrus x bretschneideri][more]
gi|920689557|gb|KOM33540.1|6.1e-4379.41hypothetical protein LR48_Vigan01g309600 [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002109Glutaredoxin
IPR011905GlrX-like_pln_2
IPR012336Thioredoxin-like_fold
IPR014025Glutaredoxin_subgr
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0015035protein disulfide oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0022900 electron transport chain
cellular_component GO:0005623 cell
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G14890.1CSPI06G14890.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 13..75
score: 3.0
IPR002109GlutaredoxinPROFILEPS51354GLUTAREDOXIN_2coord: 1..101
score: 22
IPR011905Glutaredoxin-like, plant IITIGRFAMsTIGR02189TIGR02189coord: 4..102
score: 1.8
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 2..102
score: 7.6
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 1..101
score: 1.12
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 72..85
score: 4.9E-6coord: 58..71
score: 4.9E-6coord: 13..31
score: 4.
NoneNo IPR availablePANTHERPTHR10168GLUTAREDOXINcoord: 1..102
score: 2.0
NoneNo IPR availablePANTHERPTHR10168:SF115MONOTHIOL GLUTAREDOXIN-S2-RELATEDcoord: 1..102
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G14890Cla009323Watermelon (97103) v1cpiwmB560
CSPI06G14890Cla021715Watermelon (97103) v1cpiwmB515
CSPI06G14890Csa6G198280Cucumber (Chinese Long) v2cpicuB314
CSPI06G14890Csa3G152080Cucumber (Chinese Long) v2cpicuB294
CSPI06G14890MELO3C006620Melon (DHL92) v3.5.1cpimeB501
CSPI06G14890MELO3C021350Melon (DHL92) v3.5.1cpimeB439
CSPI06G14890ClCG06G005320Watermelon (Charleston Gray)cpiwcgB505
CSPI06G14890Lsi05G015130Bottle gourd (USVL1VR-Ls)cpilsiB474
CSPI06G14890Lsi09G014080Bottle gourd (USVL1VR-Ls)cpilsiB406
CSPI06G14890MELO3C006620.2Melon (DHL92) v3.6.1cpimedB489
CSPI06G14890MELO3C021350.2Melon (DHL92) v3.6.1cpimedB437
CSPI06G14890CsaV3_3G014270Cucumber (Chinese Long) v3cpicucB345
CSPI06G14890CsaV3_6G017360Cucumber (Chinese Long) v3cpicucB364
CSPI06G14890Cla97C05G087350Watermelon (97103) v2cpiwmbB494
CSPI06G14890Cla97C06G114820Watermelon (97103) v2cpiwmbB497
CSPI06G14890Bhi01G000689Wax gourdcpiwgoB564
CSPI06G14890Bhi12G001853Wax gourdcpiwgoB542
CSPI06G14890Cucsa.172120Cucumber (Gy14) v1cgycpiB270
CSPI06G14890Cucsa.253440Cucumber (Gy14) v1cgycpiB392
CSPI06G14890CmaCh17G003120Cucurbita maxima (Rimu)cmacpiB385
CSPI06G14890CmaCh08G012090Cucurbita maxima (Rimu)cmacpiB927
CSPI06G14890CmaCh06G014760Cucurbita maxima (Rimu)cmacpiB863
CSPI06G14890CmoCh17G003000Cucurbita moschata (Rifu)cmocpiB374
CSPI06G14890CmoCh08G011830Cucurbita moschata (Rifu)cmocpiB906
CSPI06G14890Cp4.1LG17g00850Cucurbita pepo (Zucchini)cpecpiB327
CSPI06G14890Cp4.1LG12g02540Cucurbita pepo (Zucchini)cpecpiB155
CSPI06G14890CsGy6G014770Cucumber (Gy14) v2cgybcpiB288
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CSPI06G14890CSPI03G14050Wild cucumber (PI 183967)cpicpiB137
The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G14890Silver-seed gourdcarcpiB0084