CmaCh06G015980 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G015980
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_15
Location	Cma_Chr06 : 9958252 .. 9960802 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCTCAAAGTTAGGGTTCCAGGGGTGAAACGAATCCGAAAGTTGAAGACAATGGCGAAGTTCAATGTGGTTCAGAAGCAGAGACGAGCTCATAAAGCTCAGACGAAGAGGGACGCCCATGGTGATCCCTTGACGAAGAAGCTAAAGATCAAGCAACAGCCTACTTATGTTTCCAGTAAGCGTAAGCGCAAGTTGATGAAGAAAAAACGCAGAGTATGGATTCTATGTGCCTGCGTTTGTTTTGTGCTATGTATTTCAATTGAAAGTATCTGTGATGCGGATTGATTGATCTCTTTTTGTTCGATTCTTGATAATTGCAGGAAGAGAAGGAAGCTTTACAGATGGGGCTGACGAACATGGAAGATGTTGAAATGGCTGTTGCCGAAGGTAATTCTTTCATATGCTATTGCTATTTTCGTATTTGAACTGTTCCTTCAATTGTCAACTTCCTGTGGTTTCCCCCCCTAATTTTAACTTGTTGAAGGGCTCTAGGAGAACTATTTCGAAAATGTTTTCGTTTTTGAGCATTAAGTTCGTTTTCACCATGAAGCTACTTTAGAAATTGTGTTGGTGCAAGCGTAGGCCGGGTCTGTTAATGACAATCATGTTTGTGATAGGGTTAAGGGGCACAAACAAATAGAGTTTACAGTAATAAGATAGAAGTATAGGCACTGTGATTTTTGTTAATAAACTATAAGGATTGAAGCGAAGCCTGCGCCACGGAAGATTGCTAAGAATTCTTTCAATTGGCATATGGATCATTTAAACTAAACTTGGTGAATTGGATGTATAATTTACACATGTTTGATGTGCAAAAGACAAATTAATCAAGAGAAGTGTTAAAAGTCTTCTCAATGCTGTGAACTGTTCTGTTATACTTGTTTCTAGCCAAAGATTCCGAACTAAAGCTCAAATAAATTAAAGCCAGAGAATATTGGATGGGAAGGTCCTTCATATTGGATGGGAGAGCTATGACAATAGGGAATCTCCTCCCCCCAATTTGGACTATGATTCTCATCTTTACAGGACGTTTCTTCACCTCTCATACTAACTTTAGAACTAATACTTGTAAAAATGTGATTCTATCGTGCAAAGTTTTGTTCATCCAGTAGTCCTTGGGGTATATATATCTGTATGCACGTGTTTTGTGCATAGTATCTTTGGATTCAATAGCTTCTTTGCACCTTTCACATTTTGAACCCACTTGTGGCATATTTCCCACTTGTTACCAAATGCTTGTGTTTCTTGTGAAAAAATAATTGAGAATCATTTGGGTGATTCACAATATTAACATTTTTGGCTGGATCCCATTCATCTGGGGAAGAAAGCAACAGAATAGACAATTGGTACTGTTATGTTTTGTGCTCGAATAATATTTACGTTCTCCAGTCCCCCCTTCTATCCATTTTTCTCATTTTTGAGAAAACCTGTCATATGAAAAAAATGAAAAAGAATCGGAACACCAATTTGGTGTATGGCTCATGAATTGGTCATACAACTTGATTGAACTAGTTTTCACTTGTGCCTGCTTTATTTCACTCTAAATGATAATTTTCTTTTGTTTCTGCACTGATATAGAACTTAAAAACACCAATCGAACATCGACCAAGTTCCATGTGAAGAAGAGTGTCCGGCTTAGGCAATTAAGGAGCAGCAAAGGCAAGTGTTGACTATTTACTGTTTCTTCTCCATATTTTGTACTAATTCCCTATTAATCTTTCATCTTTTTTGAATGTGAAGGCAAGAAGAACAAAGGAAAATCTTCTTCCAGTTCAGGTTCTACAGCATCAGGCGATGCCATGGTGGAGTAAAATAGGTGACAGAACGTTTCTTTTTCTTTTTTTTTTTTTTCAGTTTTGAATGCCTCTAGTTCTATTGTAAAATCATATTGGCTCGTTTTAATGGCTATTGCGCTGCAAATGTTCGTAGCTTTGCAAGAAAATGTTCTAAAAAAGATAAAAGATGTAGATTGCATTGAATGAGAAGCCCATGACTAAATGCTTGAAGCTAAGATTACAGCTCCAATTGAAATCATGAGCAAACCTCAGAACTCTCCAAACAGCTCCAATTTATTGTTATTATTATTACCCAACTTTTAAACAACATACTAATCTTTGAACCAAATTTTCTTCGTTATAGCAAGGTGGCTAACTTGATGGTAAACCTCTGCTATTTGCACATCACAAGAATATATTTTGCAGCCACTCATATTGTATCCATTCATACACTACGGTTGTAACATTGTGTTGAGTGTCGTGGAGCCAGCCTTCGGACACCCTAAGAGACACAGTGTTGTGGTGCTAAGACACTATGGAGGGCGTCTCAACGTTGTTGCAAATACCCCCTCCAACCAAGGCGCAAGCAGGCTAATTTTGATGAAGTCAAAAACAATGTTTAAAAACAGATAACATAACCAACGAATCTCTTTGGCTTAGTAGATGTATGAAAACATAATATAGAATAAATATTGCATGCCAACCAGACCCTAAACAACTACATTTATGGGTACTTGGCGTTGATGGTGAAGATCATTCTATTGACATCGTTCCCAC

mRNA sequence

ACCTCAAAGTTAGGGTTCCAGGGGTGAAACGAATCCGAAAGTTGAAGACAATGGCGAAGTTCAATGTGGTTCAGAAGCAGAGACGAGCTCATAAAGCTCAGACGAAGAGGGACGCCCATGGTGATCCCTTGACGAAGAAGCTAAAGATCAAGCAACAGCCTACTTATGTTTCCAGTAAGCGTAAGCGCAAGTTGATGAAGAAAAAACGCAGAGAAGAGAAGGAAGCTTTACAGATGGGGCTGACGAACATGGAAGATGTTGAAATGGCTGTTGCCGAAGAACTTAAAAACACCAATCGAACATCGACCAAGTTCCATGTGAAGAAGAGTGTCCGGCTTAGGCAATTAAGGAGCAGCAAAGGCAAGAAGAACAAAGGAAAATCTTCTTCCAGTTCAGGTTCTACAGCATCAGGCGATGCCATGGTGGAGTAAAATAGCAAGGTGGCTAACTTGATGGTAAACCTCTGCTATTTGCACATCACAAGAATATATTTTGCAGCCACTCATATTGTATCCATTCATACACTACGGTTGTAACATTGTGTTGAGTGTCGTGGAGCCAGCCTTCGGACACCCTAAGAGACACAGTGTTGTGGTGCTAAGACACTATGGAGGGCGTCTCAACGTTGTTGCAAATACCCCCTCCAACCAAGGCGCAAGCAGGCTAATTTTGATGAAGTCAAAAACAATGTTTAAAAACAGATAACATAACCAACGAATCTCTTTGGCTTAGTAGATGTATGAAAACATAATATAGAATAAATATTGCATGCCAACCAGACCCTAAACAACTACATTTATGGGTACTTGGCGTTGATGGTGAAGATCATTCTATTGACATCGTTCCCAC

Coding sequence (CDS)

ATGGCGAAGTTCAATGTGGTTCAGAAGCAGAGACGAGCTCATAAAGCTCAGACGAAGAGGGACGCCCATGGTGATCCCTTGACGAAGAAGCTAAAGATCAAGCAACAGCCTACTTATGTTTCCAGTAAGCGTAAGCGCAAGTTGATGAAGAAAAAACGCAGAGAAGAGAAGGAAGCTTTACAGATGGGGCTGACGAACATGGAAGATGTTGAAATGGCTGTTGCCGAAGAACTTAAAAACACCAATCGAACATCGACCAAGTTCCATGTGAAGAAGAGTGTCCGGCTTAGGCAATTAAGGAGCAGCAAAGGCAAGAAGAACAAAGGAAAATCTTCTTCCAGTTCAGGTTCTACAGCATCAGGCGATGCCATGGTGGAGTAA

Protein sequence

MAKFNVVQKQRRAHKAQTKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEALQMGLTNMEDVEMAVAEELKNTNRTSTKFHVKKSVRLRQLRSSKGKKNKGKSSSSSGSTASGDAMVE

Homology

[Close]

BLAST of CmaCh06G015980 vs. TrEMBL
Match: A0A0A0L881_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171810 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.2e-50
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1


Query: 1   MAKFNVVQKQRRAHKAQTKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAKFNVVQKQRRA KAQ KRDAHGDPLTKKLKIKQQPTYVS+KRKRKLMKKKRREEKEAL
Sbjct: 1   MAKFNVVQKQRRAAKAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61  QMGLTNMEDVEMAVAEELKNTNRTSTKFHVKKSVRLRQLRSSKGKKNKGKSSSSSGSTAS 120
           QMGLTNMEDVEMAVAEELKNTNRTSTKFHVKKSVRLRQLR SKGKKNKGKSSSSSGS AS
Sbjct: 61  QMGLTNMEDVEMAVAEELKNTNRTSTKFHVKKSVRLRQLR-SKGKKNKGKSSSSSGSKAS 120

Query: 121 GDAMVE 127
           GDAMVE
Sbjct: 121 GDAMVE 125

[Close]

BLAST of CmaCh06G015980 vs. TrEMBL
Match: D7T7Q8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g02160 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-21
Identity = 72/129 (55.81%), Postives = 93/129 (72.09%), Query Frame = 1


Query: 1   MAKFNVVQKQRRAHKAQTKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAKFNVVQK+RRA KAQ KR  HGDP++ KLK K QP  +S KRKRKL K+ RRE+KEAL
Sbjct: 1   MAKFNVVQKRRRAEKAQRKRAIHGDPVSAKLKNKPQPLSLSGKRKRKLFKRWRREQKEAL 60

Query: 61  QMGLTNMEDVEMAVAE-ELKNTNRTSTKFHVKKSVRLRQL--RSSKGKKNKGKSSSSSGS 120
           + G+ +MEDVEMAV++   + TN+ STKF++KKSV+L+ L  + S+GK     S  ++  
Sbjct: 61  EKGIVSMEDVEMAVSQGTSEETNKNSTKFNLKKSVKLKHLKRKGSRGKNKIKPSKQAAAE 120

Query: 121 TASGDAMVE 127
               DAMVE
Sbjct: 121 VPVEDAMVE 129

[Close]

BLAST of CmaCh06G015980 vs. TrEMBL
Match: A0A0B2R183_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_022199 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-21
Identity = 75/128 (58.59%), Postives = 92/128 (71.88%), Query Frame = 1


Query: 1   MAKFNVVQKQRRAHKAQTKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAKFNVVQK+RRA  A+ KR  HGDPLT KLKIK QP  +S KRKRKL KK RR++K+AL
Sbjct: 1   MAKFNVVQKRRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 61  QMGLTNMEDVEMAVAE-ELKNTNRTSTKFHV-KKSVRLRQLRSSKGKKNKGKSSSSSGST 120
           Q GL  MEDV+MAVAE + K+T R S K H+ KK+++L+QL+    +K K K  S   + 
Sbjct: 61  QNGLVTMEDVQMAVAEGDTKDTPRPSPKIHLKKKALKLKQLK----RKGKNKRKSDVPAD 120

Query: 121 ASGDAMVE 127
            S DAMVE
Sbjct: 121 VSADAMVE 124

[Close]

BLAST of CmaCh06G015980 vs. TrEMBL
Match: I1K1P8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G000800 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-21
Identity = 75/128 (58.59%), Postives = 92/128 (71.88%), Query Frame = 1


Query: 1   MAKFNVVQKQRRAHKAQTKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAKFNVVQK+RRA  A+ KR  HGDPLT KLKIK QP  +S KRKRKL KK RR++K+AL
Sbjct: 1   MAKFNVVQKRRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 61  QMGLTNMEDVEMAVAE-ELKNTNRTSTKFHV-KKSVRLRQLRSSKGKKNKGKSSSSSGST 120
           Q GL  MEDV+MAVAE + K+T R S K H+ KK+++L+QL+    +K K K  S   + 
Sbjct: 61  QNGLVTMEDVQMAVAEGDTKDTPRPSPKIHLKKKALKLKQLK----RKGKNKRKSDVPAD 120

Query: 121 ASGDAMVE 127
            S DAMVE
Sbjct: 121 VSADAMVE 124

[Close]

BLAST of CmaCh06G015980 vs. TrEMBL
Match: C6T235_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G000800 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.5e-21
Identity = 75/129 (58.14%), Postives = 92/129 (71.32%), Query Frame = 1


Query: 1   MAKFNVVQKQRRAHKAQTKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAKFNVVQK+RRA  A+ KR  HGDPLT KLKIK QP  +S KRKRKL KK RR++K+AL
Sbjct: 1   MAKFNVVQKRRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 61  QMGLTNMEDVEMAVAE--ELKNTNRTSTKFHV-KKSVRLRQLRSSKGKKNKGKSSSSSGS 120
           Q GL  MEDV+MAVAE  + K+T R S K H+ KK+++L+QL+    +K K K  S   +
Sbjct: 61  QNGLVTMEDVQMAVAEAGDTKDTPRPSPKIHLKKKALKLKQLK----RKGKNKRKSDVPA 120

Query: 121 TASGDAMVE 127
             S DAMVE
Sbjct: 121 DVSADAMVE 125

[Close]

BLAST of CmaCh06G015980 vs. TAIR10
Match: AT1G08580.1 (AT1G08580.1 unknown protein)

HSP 1 Score: 84.7 bits (208), Expect = 4.4e-17
Identity = 59/127 (46.46%), Postives = 85/127 (66.93%), Query Frame = 1


Query: 1   MAKFNVVQKQRRAHKAQTKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAK+N + K++R  KA  KR  HGDPLT KLK +     VS KR+RKL++K RRE+K+ +
Sbjct: 1   MAKYNEIAKKKREAKADRKRAIHGDPLTNKLKTRTPVPSVSGKRQRKLLRKWRREQKDMV 60

Query: 61  QMGLTNMEDVEMAVAEEL-KNTNRTSTKFHVKKSVRLRQLRSSKGKKNKGKSSSSSGSTA 120
           + GL  MEDVEMA A+   +++ ++  KF VKKS++L +L ++KGKK K + +S      
Sbjct: 61  EKGLVTMEDVEMASAQAASEDSKKSPRKFSVKKSLKLNKL-NNKGKKKKNQKASGE---K 120

Query: 121 SGDAMVE 127
           S D M+E
Sbjct: 121 SADCMLE 123

[Close]

BLAST of CmaCh06G015980 vs. NCBI nr
Match: gi|659077099|ref|XP_008439032.1| (PREDICTED: uncharacterized protein LOC103483941 isoform X1 [Cucumis melo])

HSP 1 Score: 208.0 bits (528), Expect = 9.7e-51
Identity = 121/126 (96.03%), Postives = 123/126 (97.62%), Query Frame = 1


Query: 1   MAKFNVVQKQRRAHKAQTKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAKFNVVQKQRRA +AQ KRDAHGDPLTKKLKIKQQPTYVS+KRKRKLMKKKRREEKEAL
Sbjct: 1   MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61  QMGLTNMEDVEMAVAEELKNTNRTSTKFHVKKSVRLRQLRSSKGKKNKGKSSSSSGSTAS 120
           QMGLTNMEDVEMAVAEELKNTNRTSTKFHVKKSVRLRQLR SKGKKNKGKSSSSSGSTAS
Sbjct: 61  QMGLTNMEDVEMAVAEELKNTNRTSTKFHVKKSVRLRQLR-SKGKKNKGKSSSSSGSTAS 120

Query: 121 GDAMVE 127
           GDAMVE
Sbjct: 121 GDAMVE 125

[Close]

BLAST of CmaCh06G015980 vs. NCBI nr
Match: gi|449459818|ref|XP_004147643.1| (PREDICTED: uncharacterized protein LOC101207928 isoform X2 [Cucumis sativus])

HSP 1 Score: 207.2 bits (526), Expect = 1.7e-50
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1


Query: 1   MAKFNVVQKQRRAHKAQTKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAKFNVVQKQRRA KAQ KRDAHGDPLTKKLKIKQQPTYVS+KRKRKLMKKKRREEKEAL
Sbjct: 1   MAKFNVVQKQRRAAKAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61  QMGLTNMEDVEMAVAEELKNTNRTSTKFHVKKSVRLRQLRSSKGKKNKGKSSSSSGSTAS 120
           QMGLTNMEDVEMAVAEELKNTNRTSTKFHVKKSVRLRQLR SKGKKNKGKSSSSSGS AS
Sbjct: 61  QMGLTNMEDVEMAVAEELKNTNRTSTKFHVKKSVRLRQLR-SKGKKNKGKSSSSSGSKAS 120

Query: 121 GDAMVE 127
           GDAMVE
Sbjct: 121 GDAMVE 125

[Close]

BLAST of CmaCh06G015980 vs. NCBI nr
Match: gi|449459816|ref|XP_004147642.1| (PREDICTED: uncharacterized protein LOC101207928 isoform X1 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 6.8e-28
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 1


Query: 1  MAKFNVVQKQRRAHKAQTKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRA KAQ KRDAHGDPLTKKLKIKQQPTYVS+KRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRAAKAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLTNMEDVEMAVAE 77
          QMGLTNMEDVEMAVAE
Sbjct: 61 QMGLTNMEDVEMAVAE 76

[Close]

BLAST of CmaCh06G015980 vs. NCBI nr
Match: gi|659077101|ref|XP_008439033.1| (PREDICTED: uncharacterized protein LOC103483941 isoform X2 [Cucumis melo])

HSP 1 Score: 130.6 bits (327), Expect = 2.0e-27
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1


Query: 1  MAKFNVVQKQRRAHKAQTKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRA +AQ KRDAHGDPLTKKLKIKQQPTYVS+KRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLTNMEDVEMAVAE 77
          QMGLTNMEDVEMAVAE
Sbjct: 61 QMGLTNMEDVEMAVAE 76

[Close]

BLAST of CmaCh06G015980 vs. NCBI nr
Match: gi|1021521116|ref|XP_016203943.1| (PREDICTED: uncharacterized protein LOC107644569 isoform X1 [Arachis ipaensis])

HSP 1 Score: 120.9 bits (302), Expect = 1.6e-24
Identity = 82/134 (61.19%), Postives = 103/134 (76.87%), Query Frame = 1


Query: 1   MAKFNVVQKQRRAHKAQTKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAKFNVVQKQRRA  A+ KR  HGDP+T KLK+K QP+ +S KRKRKL K+ RRE+K AL
Sbjct: 1   MAKFNVVQKQRRASIAERKRKIHGDPVTGKLKVKDQPSSLSGKRKRKLFKQWRREQKVAL 60

Query: 61  QMGLTNMEDVEMAVAE---ELKNT-NRTSTKFHVKKSVRLRQLRSSKGK-KNKGKSSSSS 120
           + GL +MEDV+MAVAE   E K+T ++TS KFH+KKS++L+QL+  KGK KNK KS+ S+
Sbjct: 61  EKGLVSMEDVQMAVAEAAGEAKDTISKTSGKFHLKKSLKLKQLKKHKGKGKNKRKSNVSA 120

Query: 121 GSTA---SGDAMVE 127
            + A   S DAMVE
Sbjct: 121 AAAAAETSADAMVE 134

The following BLAST results are available for this feature:

BLAST of CmaCh06G015980 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh06G015980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L881_CUCSA	1.2e-50	96.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171810 PE=4 SV=1	[more]
D7T7Q8_VITVI	1.9e-21	55.81	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g02160 PE=4 SV=...	[more]
A0A0B2R183_GLYSO	1.9e-21	58.59	Uncharacterized protein OS=Glycine soja GN=glysoja_022199 PE=4 SV=1	[more]
I1K1P8_SOYBN	1.9e-21	58.59	Uncharacterized protein OS=Glycine max GN=GLYMA_05G000800 PE=4 SV=1	[more]
C6T235_SOYBN	2.5e-21	58.14	Uncharacterized protein OS=Glycine max GN=GLYMA_05G000800 PE=2 SV=1	[more]

BLAST of CmaCh06G015980 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08580.1	4.4e-17	46.46	unknown protein	[more]

BLAST of CmaCh06G015980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077099\|ref\|XP_008439032.1\|	9.7e-51	96.03	PREDICTED: uncharacterized protein LOC103483941 isoform X1 [Cucumis melo]	[more]
gi\|449459818\|ref\|XP_004147643.1\|	1.7e-50	96.03	PREDICTED: uncharacterized protein LOC101207928 isoform X2 [Cucumis sativus]	[more]
gi\|449459816\|ref\|XP_004147642.1\|	6.8e-28	96.05	PREDICTED: uncharacterized protein LOC101207928 isoform X1 [Cucumis sativus]	[more]
gi\|659077101\|ref\|XP_008439033.1\|	2.0e-27	94.74	PREDICTED: uncharacterized protein LOC103483941 isoform X2 [Cucumis melo]	[more]
gi\|1021521116\|ref\|XP_016203943.1\|	1.6e-24	61.19	PREDICTED: uncharacterized protein LOC107644569 isoform X1 [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G015980.1	CmaCh06G015980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36709	FAMILY NOT NAMED	coord: 1..126 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh06G015980	Cucsa.252020	Cucumber (Gy14) v1	cgycmaB0727
CmaCh06G015980	Cla021847	Watermelon (97103) v1	cmawmB798
CmaCh06G015980	Csa3G171810	Cucumber (Chinese Long) v2	cmacuB814
CmaCh06G015980	MELO3C006770	Melon (DHL92) v3.5.1	cmameB763
CmaCh06G015980	ClCG05G007020	Watermelon (Charleston Gray)	cmawcgB737
CmaCh06G015980	CSPI03G15530	Wild cucumber (PI 183967)	cmacpiB826
CmaCh06G015980	CmoCh06G015930	Cucurbita moschata (Rifu)	cmacmoB829
CmaCh06G015980	CmoCh14G015810	Cucurbita moschata (Rifu)	cmacmoB797
CmaCh06G015980	Lsi05G013700	Bottle gourd (USVL1VR-Ls)	cmalsiB765
CmaCh06G015980	Cp4.1LG03g12190	Cucurbita pepo (Zucchini)	cmacpeB837
CmaCh06G015980	Cp4.1LG08g05520	Cucurbita pepo (Zucchini)	cmacpeB853
CmaCh06G015980	MELO3C006770.2	Melon (DHL92) v3.6.1	cmamedB863
CmaCh06G015980	CsaV3_3G015710	Cucumber (Chinese Long) v3	cmacucB0965
CmaCh06G015980	Cla97C05G088700	Watermelon (97103) v2	cmawmbB856
CmaCh06G015980	Bhi01G000840	Wax gourd	cmawgoB1006
CmaCh06G015980	CsGy3G015580	Cucumber (Gy14) v2	cgybcmaB427
CmaCh06G015980	Carg15517	Silver-seed gourd	carcmaB0974
CmaCh06G015980	Carg19584	Silver-seed gourd	carcmaB0393

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh06G015980	Cucurbita maxima (Rimu)	cmacmaB284