ClCG05G007020 (gene) Watermelon (Charleston Gray)

NameClCG05G007020
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionPm52 protein
LocationCG_Chr05 : 7155032 .. 7157442 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTCCATTTGTAAAATTAATCTTGAGTTCCATAGAGGGATAAATACCTCAAATTTAGGGTTTCGTTAGTGAAACGAATCCGGAGGTTGAAGACAATGGCGAAGTTCAATGTAGTTCAGAAGCAAAGACGAGCTCTTAAAGCTCAGATCAAGAGGGACGCCCATGGTGATCCCTTGACCAAGAAGCTCAAGATCAAGCAACAACCTACTTATGTATCCAGCAAGCGTAAGCGTAAATTGATGAAGAAAAAACGCAGAGTATGGTTTTTAACTTTCTGTGTGCTTTGCGCTTGTTTCTCCCTGTCTCTTTCTGCTGTATGTTTCAATTCAAAGTATCTATGGTGCGAATTGATTTTTCTTCGCTTCTTACTAATTACAGGAAGAGAAGGAAGCTTTACAGATGGGTCTGACGAACATGGAAGATGTTGAAATGGCTATTGCTGAAGGTAATGCTGCTTTCATATGCTTATTGTTAAACCGTCTTACTTGATGAAATCGGGATGCTAATGCTAATGCTAGTTTCATATTTGAATTGTTGCTTCAATTGTCAACTTCCTGTGGGGGTTTCTTCCAAATTTGACTTGTTGGAGGAGCTGTAGGAGACCTTTTTTGAATGTGTTTTGTTACTGGGTATTAAGTTCGTTTCCCGCTTGAAGTCACTTGGGAACTAAGTTGGTTTTAAGCGAGGCCAAGTCAATCAATTCTACACATGACCTAATGAATAGAGTCAATTTTGGTTAGATAAGTTTACTGAACTTGCTAGTTTCTTCTATGCATAGATGCTCTACACATATTCTAAGAAGCACTATTTAAATCTTGTGAGTTTGTTAGGATGGGAAGCACTTGATAAAGAACTTGGACTGTCTTAGGGCATGTTTGGTACTTGGTAGTAATTTTGAAATTGTTAAAATCATGTTCAAAGTCACCTCCAAACATGCCTTTAATCATTTAAGTTCAATTTTGATTGGATGAAAGTCGTGCTTATAGCATTTTTTGGAGTGATTTTGTACGTGACAAAAATGTTTTCTACAATTTCAAAATTGCTCCCAAGTATGCCCTCAAAGTTCCAACTTCCAATATAATACTTTCCGTTGCCTTGGCTTTTTTTTTCTTCCTTGCCTCCTTAATCCCAAGGGAACTTGTTGTTTAGTGGAACAGTTGTTAAAGTTGGAAAGATATATTTATGAATGGTTTGTGTCAAAGGGAAAAAGTTTGGTTTTGTGGTACCCGAATCTTTTAATGAAAATTATTTTGGTGATAGAGTTAGGGAGAAGAAATCAAATATATCACTAGGCACTTTGATCTTTTTCCCCCCTCAATTATATTATAACAAACTAGGAATTCGGTAGATGATAAAGTGTACATATAAAAAAAGGGAGTAGAGGGAAGCCAAGCTCAAGCCATGGAAGATTGCTTAAAACTCTTCCATTGGCTCATGGATCATTTAAACTATAGTTGCTGAAGGGGACGTCATAATTTACGCATGAGATAGCCGCAAAAGACAAGTTATTAAGAAAAGTATGAAAAGTCTTCTCTATGCTGTTAATGTTCTGTTATTTGTTTTTAGCCAAGGATTCCTCTCAAATACTCGAAAGCTATAGAAGGAATATTTTTATTTGGTGAATGATTGACCTGTCATGACAAAATGGAGGACATTTTTATTAGATGGGAGAGCCATATGAAATAGGGAATCTTCTTTTTCCCATTTTGCAGTTGTGATCTTTTACCATGTTTGATTTACTAACAAGATGTTTCTACACTCTCAATTTCACACTGAAATTTAGAACTAATACTTAGAAAGGTGATCTATGGTGCAACGTTTTGTTCAGCTAGTAGTCCTAGGGGCTCTGTATGTGTATGCAGGTGTGTTTGCATAGCACATTGGATTTAATAACTTCTTCCACCCTTCACATTTTGGACCACTTTTGGCATATTTCCCACTCGTTACAAAATGCTTGTGCTTCTTGTAAAAGTGAGAGGGAATCATTCGTGTGATTATAATATTCACAACTTTGGTTGGATTTCGTTCAACTGGGGATGAATTTTAGCATTCTGATGATTTGTGCGCATATACTACTCAAATTCTCCAGCCCCTATATTTTTGTTTACCCAATTTCTCATTTTCAAGAAAACTCAGTGTGAGAAAAATGGAAAAGAATCGTGACACAACTTGACTGAACTAGCCATTACTGTTTGTGCCTTATTAACATTTATTCCTGCTATGATGATGCAGAACTTAAAAACACAAATCGGACGCCGACCAAGTTCCATATGAAGAAGAGTGTCCGGCTCAGGCAATTAAGGAGAAAAGGCAAGTCTCGACTATTTAATTTACCCCATTTCTTCTCCTTGTTTTGTACAACTTCCCAATGAGCCTGTCAAATCTATGGAATGTACAGGTAAGAAGAATAAA

mRNA sequence

CGTCCATTTGTAAAATTAATCTTGAGTTCCATAGAGGGATAAATACCTCAAATTTAGGGTTTCGTTAGTGAAACGAATCCGGAGGTTGAAGACAATGGCGAAGTTCAATGTAGTTCAGAAGCAAAGACGAGCTCTTAAAGCTCAGATCAAGAGGGACGCCCATGGTGATCCCTTGACCAAGAAGCTCAAGATCAAGCAACAACCTACTTATGTATCCAGCAAGCGTAAGCGTAAATTGATGAAGAAAAAACGCAGAGAAGAGAAGGAAGCTTTACAGATGGGTCTGACGAACATGGAAGATGTTGAAATGGCTATTGCTGAAGAACTTAAAAACACAAATCGGACGCCGACCAAGTTCCATATGAAGAAGAGTGTCCGGCTCAGGCAATTAAGGAGAAAAGGCAAGTCTCGACTATTTAATTTACCCCATTTCTTCTCCTTGTTTTGTACAACTTCCCAATGAGCCTGTCAAATCTATGGAATGTACAGGTAAGAAGAATAAA

Coding sequence (CDS)

ATGGCGAAGTTCAATGTAGTTCAGAAGCAAAGACGAGCTCTTAAAGCTCAGATCAAGAGGGACGCCCATGGTGATCCCTTGACCAAGAAGCTCAAGATCAAGCAACAACCTACTTATGTATCCAGCAAGCGTAAGCGTAAATTGATGAAGAAAAAACGCAGAGAAGAGAAGGAAGCTTTACAGATGGGTCTGACGAACATGGAAGATGTTGAAATGGCTATTGCTGAAGAACTTAAAAACACAAATCGGACGCCGACCAAGTTCCATATGAAGAAGAGTGTCCGGCTCAGGCAATTAAGGAGAAAAGGCAAGTCTCGACTATTTAATTTACCCCATTTCTTCTCCTTGTTTTGTACAACTTCCCAATGA

Protein sequence

MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEALQMGLTNMEDVEMAIAEELKNTNRTPTKFHMKKSVRLRQLRRKGKSRLFNLPHFFSLFCTTSQ
BLAST of ClCG05G007020 vs. TrEMBL
Match: A0A0A0L881_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171810 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 9.8e-47
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 1

Query: 1   MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAKFNVVQKQRRA KAQIKRDAHGDPLTKKLKIKQQPTYVS+KRKRKLMKKKRREEKEAL
Sbjct: 1   MAKFNVVQKQRRAAKAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61  QMGLTNMEDVEMAIAEELKNTNRTPTKFHMKKSVRLRQLRRKGK 105
           QMGLTNMEDVEMA+AEELKNTNRT TKFH+KKSVRLRQLR KGK
Sbjct: 61  QMGLTNMEDVEMAVAEELKNTNRTSTKFHVKKSVRLRQLRSKGK 104

BLAST of ClCG05G007020 vs. TrEMBL
Match: A0A0B2R183_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_022199 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.0e-27
Identity = 68/108 (62.96%), Postives = 86/108 (79.63%), Query Frame = 1

Query: 1   MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAKFNVVQK+RRAL A+ KR  HGDPLT KLKIK QP  +S KRKRKL KK RR++K+AL
Sbjct: 1   MAKFNVVQKRRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 61  QMGLTNMEDVEMAIAE-ELKNTNRTPTKFHM-KKSVRLRQLRRKGKSR 107
           Q GL  MEDV+MA+AE + K+T R   K H+ KK+++L+QL+RKGK++
Sbjct: 61  QNGLVTMEDVQMAVAEGDTKDTPRPSPKIHLKKKALKLKQLKRKGKNK 108

BLAST of ClCG05G007020 vs. TrEMBL
Match: I1K1P8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G000800 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.0e-27
Identity = 68/108 (62.96%), Postives = 86/108 (79.63%), Query Frame = 1

Query: 1   MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAKFNVVQK+RRAL A+ KR  HGDPLT KLKIK QP  +S KRKRKL KK RR++K+AL
Sbjct: 1   MAKFNVVQKRRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 61  QMGLTNMEDVEMAIAE-ELKNTNRTPTKFHM-KKSVRLRQLRRKGKSR 107
           Q GL  MEDV+MA+AE + K+T R   K H+ KK+++L+QL+RKGK++
Sbjct: 61  QNGLVTMEDVQMAVAEGDTKDTPRPSPKIHLKKKALKLKQLKRKGKNK 108

BLAST of ClCG05G007020 vs. TrEMBL
Match: C6T235_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G000800 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 6.6e-27
Identity = 68/109 (62.39%), Postives = 86/109 (78.90%), Query Frame = 1

Query: 1   MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAKFNVVQK+RRAL A+ KR  HGDPLT KLKIK QP  +S KRKRKL KK RR++K+AL
Sbjct: 1   MAKFNVVQKRRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 61  QMGLTNMEDVEMAIAE--ELKNTNRTPTKFHM-KKSVRLRQLRRKGKSR 107
           Q GL  MEDV+MA+AE  + K+T R   K H+ KK+++L+QL+RKGK++
Sbjct: 61  QNGLVTMEDVQMAVAEAGDTKDTPRPSPKIHLKKKALKLKQLKRKGKNK 109

BLAST of ClCG05G007020 vs. TrEMBL
Match: A0A0B2QIW9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_037209 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.5e-26
Identity = 67/108 (62.04%), Postives = 85/108 (78.70%), Query Frame = 1

Query: 1   MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAKFNVVQK+RRAL A+ KR  HGDPLT KLKIK QP  +S KRKRKL KK RR++K+AL
Sbjct: 1   MAKFNVVQKKRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 61  QMGLTNMEDVEMAIAE-ELKNTNRTPTKFHM-KKSVRLRQLRRKGKSR 107
           Q GL  MEDV+MA+AE + K+  R   K H+ KK+++L+QL+RKGK++
Sbjct: 61  QNGLVTMEDVQMAVAEGDTKDAPRPSAKIHLKKKTLKLKQLKRKGKNK 108

BLAST of ClCG05G007020 vs. TAIR10
Match: AT1G08580.1 (AT1G08580.1 unknown protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-22
Identity = 52/107 (48.60%), Postives = 73/107 (68.22%), Query Frame = 1

Query: 1   MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAK+N + K++R  KA  KR  HGDPLT KLK +     VS KR+RKL++K RRE+K+ +
Sbjct: 1   MAKYNEIAKKKREAKADRKRAIHGDPLTNKLKTRTPVPSVSGKRQRKLLRKWRREQKDMV 60

Query: 61  QMGLTNMEDVEMAIAEEL-KNTNRTPTKFHMKKSVRLRQLRRKGKSR 107
           + GL  MEDVEMA A+   +++ ++P KF +KKS++L +L  KGK +
Sbjct: 61  EKGLVTMEDVEMASAQAASEDSKKSPRKFSVKKSLKLNKLNNKGKKK 107

BLAST of ClCG05G007020 vs. NCBI nr
Match: gi|449459818|ref|XP_004147643.1| (PREDICTED: uncharacterized protein LOC101207928 isoform X2 [Cucumis sativus])

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 1

Query: 1   MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAKFNVVQKQRRA KAQIKRDAHGDPLTKKLKIKQQPTYVS+KRKRKLMKKKRREEKEAL
Sbjct: 1   MAKFNVVQKQRRAAKAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61  QMGLTNMEDVEMAIAEELKNTNRTPTKFHMKKSVRLRQLRRKGK 105
           QMGLTNMEDVEMA+AEELKNTNRT TKFH+KKSVRLRQLR KGK
Sbjct: 61  QMGLTNMEDVEMAVAEELKNTNRTSTKFHVKKSVRLRQLRSKGK 104

BLAST of ClCG05G007020 vs. NCBI nr
Match: gi|659077099|ref|XP_008439032.1| (PREDICTED: uncharacterized protein LOC103483941 isoform X1 [Cucumis melo])

HSP 1 Score: 193.7 bits (491), Expect = 1.8e-46
Identity = 97/104 (93.27%), Postives = 102/104 (98.08%), Query Frame = 1

Query: 1   MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAKFNVVQKQRRA++AQIKRDAHGDPLTKKLKIKQQPTYVS+KRKRKLMKKKRREEKEAL
Sbjct: 1   MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61  QMGLTNMEDVEMAIAEELKNTNRTPTKFHMKKSVRLRQLRRKGK 105
           QMGLTNMEDVEMA+AEELKNTNRT TKFH+KKSVRLRQLR KGK
Sbjct: 61  QMGLTNMEDVEMAVAEELKNTNRTSTKFHVKKSVRLRQLRSKGK 104

BLAST of ClCG05G007020 vs. NCBI nr
Match: gi|449459816|ref|XP_004147642.1| (PREDICTED: uncharacterized protein LOC101207928 isoform X1 [Cucumis sativus])

HSP 1 Score: 145.6 bits (366), Expect = 5.7e-32
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query: 1  MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRA KAQIKRDAHGDPLTKKLKIKQQPTYVS+KRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRAAKAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLTNMEDVEMAIAE 77
          QMGLTNMEDVEMA+AE
Sbjct: 61 QMGLTNMEDVEMAVAE 76

BLAST of ClCG05G007020 vs. NCBI nr
Match: gi|659077101|ref|XP_008439033.1| (PREDICTED: uncharacterized protein LOC103483941 isoform X2 [Cucumis melo])

HSP 1 Score: 145.2 bits (365), Expect = 7.5e-32
Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 1

Query: 1  MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRA++AQIKRDAHGDPLTKKLKIKQQPTYVS+KRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLTNMEDVEMAIAE 77
          QMGLTNMEDVEMA+AE
Sbjct: 61 QMGLTNMEDVEMAVAE 76

BLAST of ClCG05G007020 vs. NCBI nr
Match: gi|502090291|ref|XP_004489181.1| (PREDICTED: uncharacterized protein LOC101498222 [Cicer arietinum])

HSP 1 Score: 135.2 bits (339), Expect = 7.7e-29
Identity = 69/109 (63.30%), Postives = 90/109 (82.57%), Query Frame = 1

Query: 1   MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
           MAKFNVVQK+RRAL A+ KR  HGDP T +LKI+QQP  +S KRKRKL KK RRE+K+AL
Sbjct: 1   MAKFNVVQKRRRALVAEKKRQIHGDPTTGRLKIRQQPVSISGKRKRKLFKKWRREQKDAL 60

Query: 61  QMGLTNMEDVEMAIAE-ELKNTNRT--PTKFHMKKSVRLRQLRRKGKSR 107
           Q GL +MEDV+MA+AE E+K+++RT   TK H+KK ++L+QL+RKGK++
Sbjct: 61  QNGLVSMEDVQMAVAEGEIKDSSRTTSSTKIHLKKGLKLKQLKRKGKNK 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L881_CUCSA9.8e-4794.23Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171810 PE=4 SV=1[more]
A0A0B2R183_GLYSO5.0e-2762.96Uncharacterized protein OS=Glycine soja GN=glysoja_022199 PE=4 SV=1[more]
I1K1P8_SOYBN5.0e-2762.96Uncharacterized protein OS=Glycine max GN=GLYMA_05G000800 PE=4 SV=1[more]
C6T235_SOYBN6.6e-2762.39Uncharacterized protein OS=Glycine max GN=GLYMA_05G000800 PE=2 SV=1[more]
A0A0B2QIW9_GLYSO1.5e-2662.04Uncharacterized protein OS=Glycine soja GN=glysoja_037209 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G08580.11.1e-2248.60 unknown protein[more]
Match NameE-valueIdentityDescription
gi|449459818|ref|XP_004147643.1|1.4e-4694.23PREDICTED: uncharacterized protein LOC101207928 isoform X2 [Cucumis sativus][more]
gi|659077099|ref|XP_008439032.1|1.8e-4693.27PREDICTED: uncharacterized protein LOC103483941 isoform X1 [Cucumis melo][more]
gi|449459816|ref|XP_004147642.1|5.7e-3296.05PREDICTED: uncharacterized protein LOC101207928 isoform X1 [Cucumis sativus][more]
gi|659077101|ref|XP_008439033.1|7.5e-3294.74PREDICTED: uncharacterized protein LOC103483941 isoform X2 [Cucumis melo][more]
gi|502090291|ref|XP_004489181.1|7.7e-2963.30PREDICTED: uncharacterized protein LOC101498222 [Cicer arietinum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G007020.1ClCG05G007020.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36709FAMILY NOT NAMEDcoord: 1..106
score: 6.4