CmaCh05G004490 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh05G004490
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	SPIRAL1-like1
Location	Cma_Chr05 : 2062992 .. 2065644 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACGAGTATCTTCCAGACTGCGTGCAAGGTACGAGTACACCAGCCCATTCATCTCTTCGTTCCCTCTGAACTCTGAAGTTCGCCTCAGATCCGATCGTCGCCGGAAGGTTTGCACTGAATTCAAAGCCTTCGTCTTAGATCTTCTCTTCTACCTTCAGATTTGTGCTTTCTCATCGCGCATTTCAGTTTCCGAATTCATGATTTCCGTTGTCATTGAACCAAGGATTTTATCTCAATGCGTGATTGTTTTGGCGTGCTTATGCTTGATTACTTAGCGATGTGTGATTTTTTTTTATTGAGTTTCTCTTGCATTCCTTGTCTAGATCTGGTTGGTTCTCTGGATTTAGAACTGTTCTCTTTGCTTTTAATTTGAGATCGAGGTATTGTGGTGTTTGTCGGTTGGGAATTTCCCCTAGTTCTGTTCGCCTCACTCTCTACCTCTCGATTGCTGCAATTATCAGATCTTGGTTATGCATTATTGCTAAACAGTTAGTCTGACACGTTTGATTTTGTTAATTCATGAGCGTGCTTGTGTTGTTTCTTGATGTTTCCAAAGGTTATTACAGGATCTACGGAATATGTCTACATTTTAACTGTTTCTTACTTTTACGCGAAATGTATCAGATTTTGAGTTGGGTTTTTAGGGTAGATGTCAGCTGGAATATTCCTCTTGCGTTCCTGTGCAAGTCTTCGTCAATTAATAGAATAATCACTGTAGTAGACTAACAAATGGTAGTCGTGTTTTGGAAGTGTAGCTAATGGCTTCATGTCTTACGATCCGCATTTTAATGTTTTGGTTGCATTAGTATCAACTCGACCTATTACACTGACTAGGATCAACATTTAATTTGGAGATCTATTGCTCTTAACCTTATCTCTCTAGAACAGGATAACTTTTCAACTTTCTATTAATTGTGCAACCTGGGTCTTGTTAGTATCTTCTTTATTTAGGTTGGGGTTTATTTATTTAGACGACAATCCTTACCTCAGAAATAGGTTAGGTGGCTAATTTTTCCAAAAAGATTATATATGTATGTTATTTCACTTGTATAAGAGAATTATTCTCAGCTCAAAGCTAACTGTTGAAATTATAAGTTGTTACATATTGAAGTTAGAAAAATCCTCAAACAGTTACAACGGAGGAACGATTAACCTGAAAGTATGGTGCTCAAATATTAAGTTTGATGTTTTGTTACAGCAGAAGCTTGGTTTCTTACATTTTAATTCGAGATTTAAAATTTTCTTTTGATACTCAATAAGAATATATGCAATATATGGAGTTGTAAGCAGGCTTTTGACATCCTTCTGCCATGGATTTTCGCCCATTTATGTTCTGACCTTTGTTATTATCCTTTTTCCGTTTCTTCTGGTTGAAAGGCAAGCTTCTGAGTTGTGACATTTGAAAGAAATCGAAGAGCCATGGGCCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGCAGTGGAGAAGCTCCCAATGCAGGTGCACCTAAAGGTGGCCAAGCACCACCTTCAAACGAAGGAAAGGCTGTATCCAAGCCAGCAGCGTCCAAACCAGCTGCTACTGCTTCACCACCTGCAGATGCTACCAAGCAGATTCCGGCTGGTATTCATAGTAGCTCCTCAAACAACTATTTGAGGGCTGACGGTCAGAACACTGGCAATTTCATAACGGTATGGCCAATTACGATTATTCAGCAATTTATCTAGCCTAATTTGACTGCTAGCATGTTTTTGATCATTTCCAGACTCCAGAGAAGTAATTTTGTTCCACTTTTACATGACTACATCAAATCCACCCCCGCCCCCTGCCCCCAAATAGCATCTATTTATCTTGTCTGTTTCAAATTTTCCACTTTCCTATCCCATCTTTGAATTGTTGAAGACATTGGCCCTCATAGCAGTGACTTATCTCTGTGACTTGTAATCAAAGATGTTCACATCTCTTTAACGTGTTTACATATATGAGGTCTTATAACTCCACCGAGGAATAATTATCCTAAAGCACCTGATCGACAGGCGCAAATGAGGACTGTAACTAATCTTTTGCGAAAATGGCACCATGAGGAACCAAGCTTTGTTACCTTGATCTGATATAACAAAAAGGGGATTATAGTGATTGATTAGTTTTGCTTGTGGGTGCAGGATCGACCATCAACCAAGGTCCATGCTGCCCCGGGCGGTGGATCTTCTCTGGATTACCTGTTTGGTGGTGCTGGTGGAAAATGAAACCTGCAAAAATCATAACTGAATAGAGCTATTTGAAGACTATCCATATTATGTGAATTTTTATATGATGTTGAAGGGGCAATGTTTTTTCCATCTGAAATGATACTATGGCAGGACGATATGCTTTACAATGTGTAGATGCTTGTGGTTTCTGCTGTGTTTGTGTTGGGGTTTTATTCAATCAATTTTTATTTTGGATTCATGAAAAGCTGTTGTGAAGCTGTCTGTCTGTCAAGGATCTTTCTTACATGAAATGCATTACTTTCTCTTTCACTGTGCTCTATGGCTACTCATAAAATTCTTCAAACTTTTCTTAAATTAAACAGCAGAAAAATGGGGAGTTTATTGCCTGCTTTATTCTCGCCTGTCACCAGGTTCGATCCCCGGCAATGGTGCTCTAGAAAATGC

mRNA sequence

TCACGAGTATCTTCCAGACTGCGTGCAAGGTACGAGTACACCAGCCCATTCATCTCTTCGTTCCCTCTGAACTCTGAAGTTCGCCTCAGATCCGATCGTCGCCGGAAGGCAAGCTTCTGAGTTGTGACATTTGAAAGAAATCGAAGAGCCATGGGCCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGCAGTGGAGAAGCTCCCAATGCAGGTGCACCTAAAGGTGGCCAAGCACCACCTTCAAACGAAGGAAAGGCTGTATCCAAGCCAGCAGCGTCCAAACCAGCTGCTACTGCTTCACCACCTGCAGATGCTACCAAGCAGATTCCGGCTGGTATTCATAGTAGCTCCTCAAACAACTATTTGAGGGCTGACGGTCAGAACACTGGCAATTTCATAACGGATCGACCATCAACCAAGGTCCATGCTGCCCCGGGCGGTGGATCTTCTCTGGATTACCTGTTTGGTGGTGCTGGTGGAAAATGAAACCTGCAAAAATCATAACTGAATAGAGCTATTTGAAGACTATCCATATTATGTGAATTTTTATATGATGTTGAAGGGGCAATGTTTTTTCCATCTGAAATGATACTATGGCAGGACGATATGCTTTACAATGTGTAGATGCTTGTGGTTTCTGCTGTGTTTGTGTTGGGGTTTTATTCAATCAATTTTTATTTTGGATTCATGAAAAGCTGTTGTGAAGCTGTCTGTCTGTCAAGGATCTTTCTTACATGAAATGCATTACTTTCTCTTTCACTGTGCTCTATGGCTACTCATAAAATTCTTCAAACTTTTCTTAAATTAAACAGCAGAAAAATGGGGAGTTTATTGCCTGCTTTATTCTCGCCTGTCACCAGGTTCGATCCCCGGCAATGGTGCTCTAGAAAATGC

Coding sequence (CDS)

ATGGGCCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGCAGTGGAGAAGCTCCCAATGCAGGTGCACCTAAAGGTGGCCAAGCACCACCTTCAAACGAAGGAAAGGCTGTATCCAAGCCAGCAGCGTCCAAACCAGCTGCTACTGCTTCACCACCTGCAGATGCTACCAAGCAGATTCCGGCTGGTATTCATAGTAGCTCCTCAAACAACTATTTGAGGGCTGACGGTCAGAACACTGGCAATTTCATAACGGATCGACCATCAACCAAGGTCCATGCTGCCCCGGGCGGTGGATCTTCTCTGGATTACCTGTTTGGTGGTGCTGGTGGAAAATGA

Protein sequence

MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK

Homology

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BLAST of CmaCh05G004490 vs. Swiss-Prot
Match: SP1L1_ARATH (Protein SPIRAL1-like 1 OS=Arabidopsis thaliana GN=SP1L1 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 6.1e-31
Identity = 81/116 (69.83%), Postives = 89/116 (76.72%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAP-PSNEGKAVSKPAASKPAATASPPA 60
           MGRGVS GGGQSSLGYLFGSGEAP    P    AP PS+E   +S  A   P   A+   
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPK---PAINNAPAPSSETLPIS--ADPSPKHVAAQTV 60

Query: 61  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAG 116
           + TKQIPAGI+ SS+NNY+RADGQNTGNF+TDRPSTKVHAAPGGGSSLDYLFGG G
Sbjct: 61  NVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGG 111

[Close]

BLAST of CmaCh05G004490 vs. Swiss-Prot
Match: SP1L2_ARATH (Protein SPIRAL1-like 2 OS=Arabidopsis thaliana GN=SP1L2 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 8.7e-30
Identity = 74/113 (65.49%), Postives = 87/113 (76.99%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPAD 60
           MGRGVS+GGGQSSLGYLFGSGEAP   A    + P   E  A + P      A A+   D
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVN--KTPAETESSAHAPPTQ----AAAANAVD 60

Query: 61  ATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 114
           + KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+APGGGSSLDYLFGG
Sbjct: 61  SIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGG 107

[Close]

BLAST of CmaCh05G004490 vs. Swiss-Prot
Match: SP1L1_ORYSJ (Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0417800 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.1e-27
Identity = 76/115 (66.09%), Postives = 81/115 (70.43%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPP-A 60
           M RG S+GGGQSSLGYLFG  EAP   A     A P+         A + PA   SP  A
Sbjct: 1   MSRGGSAGGGQSSLGYLFGGNEAPKPAAKPAPAAAPAPAPAPAPAAAVAAPAEKPSPAKA 60

Query: 61  DATKQIPAGIHSS-SSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 114
           DATKQIPAGI  S S+NNY RADGQNTGNF+TDRPSTKVHAAPGGGSSL YLFGG
Sbjct: 61  DATKQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLGYLFGG 115

[Close]

BLAST of CmaCh05G004490 vs. Swiss-Prot
Match: SP1L3_ORYSJ (Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica GN=Os12g0502000 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.3e-27
Identity = 73/114 (64.04%), Postives = 82/114 (71.93%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPA-ASKPAATASPPA 60
           MGRGVSSGGGQSSLGYLFG GEAP                K+  KPA   KPA ++S  A
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEAP----------------KSAEKPAPVQKPAPSSS--A 60

Query: 61  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 114
           +  K+IPAGI SS +NNY+RA+GQN GNF+TDRPSTKV AAPGGGSSLDYLF G
Sbjct: 61  EKLKEIPAGIQSSKANNYMRAEGQNCGNFLTDRPSTKVQAAPGGGSSLDYLFSG 96

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BLAST of CmaCh05G004490 vs. Swiss-Prot
Match: SP1L2_ORYSJ (Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica GN=Os11g0629400 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-25
Identity = 72/112 (64.29%), Postives = 78/112 (69.64%), Query Frame = 1


Query: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPADA 61
           GRGVSSGGGQSSLGYLFG GE   A   K   A       A  K AA   AA+ S  A+ 
Sbjct: 4   GRGVSSGGGQSSLGYLFGGGETAPAAKAKPAAAAEKETTPAPVKKAAVAAAASPSA-AEK 63

Query: 62  TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 114
            K+IPAGI S+ +NNY RA GQN GNF+TDRPSTKVHAAPGGGSSL YLFGG
Sbjct: 64  MKEIPAGIQSTQANNYFRAQGQNCGNFLTDRPSTKVHAAPGGGSSLGYLFGG 114

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BLAST of CmaCh05G004490 vs. TrEMBL
Match: A0A0A0KFN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G366520 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.6e-46
Identity = 104/118 (88.14%), Postives = 109/118 (92.37%), Query Frame = 1


Query: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQA--PPSNEGKAVSKPAASKPAATASPPA 61
           GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PP +E K +SKPA SKPAATASPPA
Sbjct: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPA 62

Query: 62  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 118
           D +KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

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BLAST of CmaCh05G004490 vs. TrEMBL
Match: M5XNQ4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012233mg PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 5.7e-36
Identity = 90/118 (76.27%), Postives = 95/118 (80.51%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAAT--ASPP 60
           MGRGVSSGGGQSSLGYLFGSGEAP   A     AP  NEG+ V+   ASKP A   A  P
Sbjct: 60  MGRGVSSGGGQSSLGYLFGSGEAPKPAANNTQAAPIPNEGRVVTNEPASKPTAPPPAPEP 119

Query: 61  ADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGG 117
            D TKQIPAGIHS+SSNNY+RADGQNTGNFITDRPSTKVH+APGGGSSLDYLFGG GG
Sbjct: 120 VDITKQIPAGIHSTSSNNYMRADGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGPGG 177

[Close]

BLAST of CmaCh05G004490 vs. TrEMBL
Match: A0A059D7D9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03146 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.4e-34
Identity = 88/115 (76.52%), Postives = 91/115 (79.13%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPAD 60
           MGRGVSSGGGQSSLGYLFGSGEAP A A     AP       V  P  SKPA   SPP D
Sbjct: 129 MGRGVSSGGGQSSLGYLFGSGEAPKAAASSPQTAPAE-----VDNPPPSKPAVV-SPPVD 188

Query: 61  ATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAG 116
            TKQIPAGIHS+SSNNY+RADGQNTGNF+TDRPSTKVH APGGGSSLDYLFGGAG
Sbjct: 189 VTKQIPAGIHSTSSNNYMRADGQNTGNFLTDRPSTKVHNAPGGGSSLDYLFGGAG 237

[Close]

BLAST of CmaCh05G004490 vs. TrEMBL
Match: W9QNX4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026438 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.3e-34
Identity = 86/116 (74.14%), Postives = 94/116 (81.03%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPAD 60
           MGRG SSGGGQSSLGYLFGSGEAP     K   A P+NE +AV+   ASKP A    P D
Sbjct: 1   MGRGNSSGGGQSSLGYLFGSGEAPKPATNKA--AAPTNEVRAVNDVPASKPTAAPPQPVD 60

Query: 61  ATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGG 117
            +KQIPAGI+S+S+NNY+RADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG GG
Sbjct: 61  VSKQIPAGINSTSTNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGPGG 114

[Close]

BLAST of CmaCh05G004490 vs. TrEMBL
Match: A0A061E9M7_THECC (T1K7.26 protein OS=Theobroma cacao GN=TCM_011514 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.0e-32
Identity = 87/116 (75.00%), Postives = 91/116 (78.45%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPAD 60
           MGRGVSSGGGQSSLGYLFGSGEAP  G  K   AP   E  AVSK A +   A A  P D
Sbjct: 1   MGRGVSSGGGQSSLGYLFGSGEAPKPGTNKPQAAP--TEAPAVSKSAPAPAPAPAPEPVD 60

Query: 61  ATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGG 117
            TKQ PAGI+S+S+NNYLRADGQNTGNFITDRPSTKVHAAPGGGSSL YLFGGA G
Sbjct: 61  ITKQTPAGINSTSTNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGAPG 114

[Close]

BLAST of CmaCh05G004490 vs. TAIR10
Match: AT1G26355.1 (AT1G26355.1 SPIRAL1-like1)

HSP 1 Score: 134.8 bits (338), Expect = 3.4e-32
Identity = 81/116 (69.83%), Postives = 89/116 (76.72%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAP-PSNEGKAVSKPAASKPAATASPPA 60
           MGRGVS GGGQSSLGYLFGSGEAP    P    AP PS+E   +S  A   P   A+   
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPK---PAINNAPAPSSETLPIS--ADPSPKHVAAQTV 60

Query: 61  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAG 116
           + TKQIPAGI+ SS+NNY+RADGQNTGNF+TDRPSTKVHAAPGGGSSLDYLFGG G
Sbjct: 61  NVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGG 111

[Close]

BLAST of CmaCh05G004490 vs. TAIR10
Match: AT1G69230.1 (AT1G69230.1 SPIRAL1-like2)

HSP 1 Score: 131.0 bits (328), Expect = 4.9e-31
Identity = 74/113 (65.49%), Postives = 87/113 (76.99%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPAD 60
           MGRGVS+GGGQSSLGYLFGSGEAP   A    + P   E  A + P      A A+   D
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVN--KTPAETESSAHAPPTQ----AAAANAVD 60

Query: 61  ATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 114
           + KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+APGGGSSLDYLFGG
Sbjct: 61  SIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGG 107

[Close]

BLAST of CmaCh05G004490 vs. TAIR10
Match: AT2G03680.1 (AT2G03680.1 spiral1)

HSP 1 Score: 106.7 bits (265), Expect = 1.0e-23
Identity = 75/122 (61.48%), Postives = 82/122 (67.21%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAP-----PSNEGKAVSKPAASKPAATA 60
           MGRG S GGGQSSL YLFG G+AP   APK   AP      SN G A    A +  A T 
Sbjct: 1   MGRGNSCGGGQSSLDYLFG-GDAP---APKPVPAPRPAPTESNNGPAPPVTAVTATALTT 60

Query: 61  SP----PADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLF 114
           +     PA+  KQIPAGI  +  NNY RA+GQNTGNF+TDRPSTKVHAAPGGGSSLDYLF
Sbjct: 61  ATTSVEPAELNKQIPAGI-KTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLF 117

[Close]

BLAST of CmaCh05G004490 vs. TAIR10
Match: AT3G02180.1 (AT3G02180.1 SPIRAL1-like3)

HSP 1 Score: 93.2 bits (230), Expect = 1.1e-19
Identity = 57/111 (51.35%), Postives = 71/111 (63.96%), Query Frame = 1


Query: 3   RGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPADAT 62
           RGV++G  +SSLGYLFGSG+  +A A   G    +      +     +P  T +      
Sbjct: 5   RGVNNGVNESSLGYLFGSGQPSSAAAATMGTTTTTTT-TTTTDGTGGRPITTTTTTVTDN 64

Query: 63  KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 114
           K+  AG+  S  NNY R++GQN GNF+TDRPSTKVHAAPGGGSSLDYLFGG
Sbjct: 65  KKTSAGVRGSP-NNYFRSEGQNCGNFLTDRPSTKVHAAPGGGSSLDYLFGG 113

[Close]

BLAST of CmaCh05G004490 vs. TAIR10
Match: AT5G15600.1 (AT5G15600.1 SPIRAL1-like4)

HSP 1 Score: 90.5 bits (223), Expect = 7.4e-19
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 1


Query: 3   RGVSSGGGQSSLGYLFGSGEA---PNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPA 62
           RGV+SGGG+SSLGYLFGSGE+   PN    K G    +      +  A  +P  T +   
Sbjct: 5   RGVNSGGGESSLGYLFGSGESVPKPNKPNAKTGFTTTTTT-TTTTDGAGGRPKTTTTTTT 64

Query: 63  ----DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFG 113
               + T++  AG+  S  NNY R+DGQN GNF+T+RPSTKVHAAPGGGSSL YLFG
Sbjct: 65  TGDKNKTEENSAGVRGSP-NNYYRSDGQNCGNFLTERPSTKVHAAPGGGSSLGYLFG 119

[Close]

BLAST of CmaCh05G004490 vs. NCBI nr
Match: gi|659089321|ref|XP_008445444.1| (PREDICTED: protein SPIRAL1-like 1 [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 8.4e-49
Identity = 109/118 (92.37%), Postives = 111/118 (94.07%), Query Frame = 1


Query: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQA--PPSNEGKAVSKPAASKPAATASPPA 61
           GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PPSNEGK VSKPA SKPAATASPPA
Sbjct: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASPPA 62

Query: 62  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 118
           D TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 63  DITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of CmaCh05G004490 vs. NCBI nr
Match: gi|449452849|ref|XP_004144171.1| (PREDICTED: protein SPIRAL1-like 1 [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 2.3e-46
Identity = 104/118 (88.14%), Postives = 109/118 (92.37%), Query Frame = 1


Query: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQA--PPSNEGKAVSKPAASKPAATASPPA 61
           GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PP +E K +SKPA SKPAATASPPA
Sbjct: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPA 62

Query: 62  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 118
           D +KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of CmaCh05G004490 vs. NCBI nr
Match: gi|645277568|ref|XP_008243832.1| (PREDICTED: protein SPIRAL1-like 1 isoform X1 [Prunus mume])

HSP 1 Score: 158.3 bits (399), Expect = 8.2e-36
Identity = 90/118 (76.27%), Postives = 95/118 (80.51%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAAT--ASPP 60
           MGRGVSSGGGQSSLGYLFGSGEAP   A     AP  NEG+ V+   ASKP A   A  P
Sbjct: 13  MGRGVSSGGGQSSLGYLFGSGEAPKPAANNTQAAPIPNEGRVVTNEPASKPTAPPPAPEP 72

Query: 61  ADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGG 117
            D TKQIPAGIHS+SSNNY+RADGQNTGNFITDRPSTKVH+APGGGSSLDYLFGG GG
Sbjct: 73  VDITKQIPAGIHSTSSNNYMRADGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGPGG 130

[Close]

BLAST of CmaCh05G004490 vs. NCBI nr
Match: gi|596288440|ref|XP_007225937.1| (hypothetical protein PRUPE_ppa012233mg [Prunus persica])

HSP 1 Score: 158.3 bits (399), Expect = 8.2e-36
Identity = 90/118 (76.27%), Postives = 95/118 (80.51%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAAT--ASPP 60
           MGRGVSSGGGQSSLGYLFGSGEAP   A     AP  NEG+ V+   ASKP A   A  P
Sbjct: 60  MGRGVSSGGGQSSLGYLFGSGEAPKPAANNTQAAPIPNEGRVVTNEPASKPTAPPPAPEP 119

Query: 61  ADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGG 117
            D TKQIPAGIHS+SSNNY+RADGQNTGNFITDRPSTKVH+APGGGSSLDYLFGG GG
Sbjct: 120 VDITKQIPAGIHSTSSNNYMRADGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGPGG 177

[Close]

BLAST of CmaCh05G004490 vs. NCBI nr
Match: gi|645277571|ref|XP_008243833.1| (PREDICTED: protein SPIRAL1-like 1 isoform X2 [Prunus mume])

HSP 1 Score: 158.3 bits (399), Expect = 8.2e-36
Identity = 90/118 (76.27%), Postives = 95/118 (80.51%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAAT--ASPP 60
           MGRGVSSGGGQSSLGYLFGSGEAP   A     AP  NEG+ V+   ASKP A   A  P
Sbjct: 1   MGRGVSSGGGQSSLGYLFGSGEAPKPAANNTQAAPIPNEGRVVTNEPASKPTAPPPAPEP 60

Query: 61  ADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGG 117
            D TKQIPAGIHS+SSNNY+RADGQNTGNFITDRPSTKVH+APGGGSSLDYLFGG GG
Sbjct: 61  VDITKQIPAGIHSTSSNNYMRADGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGPGG 118

The following BLAST results are available for this feature:

BLAST of CmaCh05G004490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SP1L1_ARATH	6.1e-31	69.83	Protein SPIRAL1-like 1 OS=Arabidopsis thaliana GN=SP1L1 PE=2 SV=1	[more]
SP1L2_ARATH	8.7e-30	65.49	Protein SPIRAL1-like 2 OS=Arabidopsis thaliana GN=SP1L2 PE=2 SV=1	[more]
SP1L1_ORYSJ	4.1e-27	66.09	Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0417800 PE=3 SV=1	[more]
SP1L3_ORYSJ	5.3e-27	64.04	Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica GN=Os12g0502000 PE=3 SV=1	[more]
SP1L2_ORYSJ	2.2e-25	64.29	Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica GN=Os11g0629400 PE=3 SV=1	[more]

BLAST of CmaCh05G004490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFN2_CUCSA	1.6e-46	88.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G366520 PE=4 SV=1	[more]
M5XNQ4_PRUPE	5.7e-36	76.27	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012233mg PE=4 SV=1	[more]
A0A059D7D9_EUCGR	1.4e-34	76.52	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03146 PE=4 SV=1	[more]
W9QNX4_9ROSA	5.3e-34	74.14	Uncharacterized protein OS=Morus notabilis GN=L484_026438 PE=4 SV=1	[more]
A0A061E9M7_THECC	1.0e-32	75.00	T1K7.26 protein OS=Theobroma cacao GN=TCM_011514 PE=4 SV=1	[more]

BLAST of CmaCh05G004490 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G26355.1	3.4e-32	69.83	SPIRAL1-like1	[more]
AT1G69230.1	4.9e-31	65.49	SPIRAL1-like2	[more]
AT2G03680.1	1.0e-23	61.48	spiral1	[more]
AT3G02180.1	1.1e-19	51.35	SPIRAL1-like3	[more]
AT5G15600.1	7.4e-19	52.14	SPIRAL1-like4	[more]

BLAST of CmaCh05G004490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089321\|ref\|XP_008445444.1\|	8.4e-49	92.37	PREDICTED: protein SPIRAL1-like 1 [Cucumis melo]	[more]
gi\|449452849\|ref\|XP_004144171.1\|	2.3e-46	88.14	PREDICTED: protein SPIRAL1-like 1 [Cucumis sativus]	[more]
gi\|645277568\|ref\|XP_008243832.1\|	8.2e-36	76.27	PREDICTED: protein SPIRAL1-like 1 isoform X1 [Prunus mume]	[more]
gi\|596288440\|ref\|XP_007225937.1\|	8.2e-36	76.27	hypothetical protein PRUPE_ppa012233mg [Prunus persica]	[more]
gi\|645277571\|ref\|XP_008243833.1\|	8.2e-36	76.27	PREDICTED: protein SPIRAL1-like 1 isoform X2 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0015693	magnesium ion transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0015095	magnesium ion transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G004490.1	CmaCh05G004490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33403	FAMILY NOT NAMED	coord: 1..113 score: 6.1
None	No IPR available	PANTHER	PTHR33403:SF1	PROTEIN SPIRAL1	coord: 1..113 score: 6.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh05G004490	Cucsa.327900	Cucumber (Gy14) v1	cgycmaB0909
CmaCh05G004490	Cla022029	Watermelon (97103) v1	cmawmB751
CmaCh05G004490	Csa6G366520	Cucumber (Chinese Long) v2	cmacuB805
CmaCh05G004490	MELO3C011417	Melon (DHL92) v3.5.1	cmameB724
CmaCh05G004490	ClCG08G010450	Watermelon (Charleston Gray)	cmawcgB709
CmaCh05G004490	CSPI06G19710	Wild cucumber (PI 183967)	cmacpiB816
CmaCh05G004490	CmoCh12G000840	Cucurbita moschata (Rifu)	cmacmoB765
CmaCh05G004490	CmoCh05G004750	Cucurbita moschata (Rifu)	cmacmoB786
CmaCh05G004490	Lsi08G009000	Bottle gourd (USVL1VR-Ls)	cmalsiB737
CmaCh05G004490	Cp4.1LG11g03950	Cucurbita pepo (Zucchini)	cmacpeB766
CmaCh05G004490	Cp4.1LG07g00840	Cucurbita pepo (Zucchini)	cmacpeB791
CmaCh05G004490	MELO3C011417.2	Melon (DHL92) v3.6.1	cmamedB817
CmaCh05G004490	CsaV3_6G033710	Cucumber (Chinese Long) v3	cmacucB0950
CmaCh05G004490	Cla97C08G153310	Watermelon (97103) v2	cmawmbB830
CmaCh05G004490	Bhi04G000919	Wax gourd	cmawgoB0940
CmaCh05G004490	Carg09264	Silver-seed gourd	carcmaB0189
CmaCh05G004490	Carg20584	Silver-seed gourd	carcmaB0921

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh05G004490	CmaCh12G001030	Cucurbita maxima (Rimu)	cmacmaB192

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh05G004490	Wax gourd	cmawgoB0950
CmaCh05G004490	Cucumber (Gy14) v2	cgybcmaB844