CmaCh05G004490.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh05G004490.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	SPIRAL1-like1
Location	Cma_Chr05 : 2062992 .. 2065644 (-)
Sequence length	912

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACGAGTATCTTCCAGACTGCGTGCAAGGTACGAGTACACCAGCCCATTCATCTCTTCGTTCCCTCTGAACTCTGAAGTTCGCCTCAGATCCGATCGTCGCCGGAAGGTTTGCACTGAATTCAAAGCCTTCGTCTTAGATCTTCTCTTCTACCTTCAGATTTGTGCTTTCTCATCGCGCATTTCAGTTTCCGAATTCATGATTTCCGTTGTCATTGAACCAAGGATTTTATCTCAATGCGTGATTGTTTTGGCGTGCTTATGCTTGATTACTTAGCGATGTGTGATTTTTTTTTATTGAGTTTCTCTTGCATTCCTTGTCTAGATCTGGTTGGTTCTCTGGATTTAGAACTGTTCTCTTTGCTTTTAATTTGAGATCGAGGTATTGTGGTGTTTGTCGGTTGGGAATTTCCCCTAGTTCTGTTCGCCTCACTCTCTACCTCTCGATTGCTGCAATTATCAGATCTTGGTTATGCATTATTGCTAAACAGTTAGTCTGACACGTTTGATTTTGTTAATTCATGAGCGTGCTTGTGTTGTTTCTTGATGTTTCCAAAGGTTATTACAGGATCTACGGAATATGTCTACATTTTAACTGTTTCTTACTTTTACGCGAAATGTATCAGATTTTGAGTTGGGTTTTTAGGGTAGATGTCAGCTGGAATATTCCTCTTGCGTTCCTGTGCAAGTCTTCGTCAATTAATAGAATAATCACTGTAGTAGACTAACAAATGGTAGTCGTGTTTTGGAAGTGTAGCTAATGGCTTCATGTCTTACGATCCGCATTTTAATGTTTTGGTTGCATTAGTATCAACTCGACCTATTACACTGACTAGGATCAACATTTAATTTGGAGATCTATTGCTCTTAACCTTATCTCTCTAGAACAGGATAACTTTTCAACTTTCTATTAATTGTGCAACCTGGGTCTTGTTAGTATCTTCTTTATTTAGGTTGGGGTTTATTTATTTAGACGACAATCCTTACCTCAGAAATAGGTTAGGTGGCTAATTTTTCCAAAAAGATTATATATGTATGTTATTTCACTTGTATAAGAGAATTATTCTCAGCTCAAAGCTAACTGTTGAAATTATAAGTTGTTACATATTGAAGTTAGAAAAATCCTCAAACAGTTACAACGGAGGAACGATTAACCTGAAAGTATGGTGCTCAAATATTAAGTTTGATGTTTTGTTACAGCAGAAGCTTGGTTTCTTACATTTTAATTCGAGATTTAAAATTTTCTTTTGATACTCAATAAGAATATATGCAATATATGGAGTTGTAAGCAGGCTTTTGACATCCTTCTGCCATGGATTTTCGCCCATTTATGTTCTGACCTTTGTTATTATCCTTTTTCCGTTTCTTCTGGTTGAAAGGCAAGCTTCTGAGTTGTGACATTTGAAAGAAATCGAAGAGCCATGGGCCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGCAGTGGAGAAGCTCCCAATGCAGGTGCACCTAAAGGTGGCCAAGCACCACCTTCAAACGAAGGAAAGGCTGTATCCAAGCCAGCAGCGTCCAAACCAGCTGCTACTGCTTCACCACCTGCAGATGCTACCAAGCAGATTCCGGCTGGTATTCATAGTAGCTCCTCAAACAACTATTTGAGGGCTGACGGTCAGAACACTGGCAATTTCATAACGGTATGGCCAATTACGATTATTCAGCAATTTATCTAGCCTAATTTGACTGCTAGCATGTTTTTGATCATTTCCAGACTCCAGAGAAGTAATTTTGTTCCACTTTTACATGACTACATCAAATCCACCCCCGCCCCCTGCCCCCAAATAGCATCTATTTATCTTGTCTGTTTCAAATTTTCCACTTTCCTATCCCATCTTTGAATTGTTGAAGACATTGGCCCTCATAGCAGTGACTTATCTCTGTGACTTGTAATCAAAGATGTTCACATCTCTTTAACGTGTTTACATATATGAGGTCTTATAACTCCACCGAGGAATAATTATCCTAAAGCACCTGATCGACAGGCGCAAATGAGGACTGTAACTAATCTTTTGCGAAAATGGCACCATGAGGAACCAAGCTTTGTTACCTTGATCTGATATAACAAAAAGGGGATTATAGTGATTGATTAGTTTTGCTTGTGGGTGCAGGATCGACCATCAACCAAGGTCCATGCTGCCCCGGGCGGTGGATCTTCTCTGGATTACCTGTTTGGTGGTGCTGGTGGAAAATGAAACCTGCAAAAATCATAACTGAATAGAGCTATTTGAAGACTATCCATATTATGTGAATTTTTATATGATGTTGAAGGGGCAATGTTTTTTCCATCTGAAATGATACTATGGCAGGACGATATGCTTTACAATGTGTAGATGCTTGTGGTTTCTGCTGTGTTTGTGTTGGGGTTTTATTCAATCAATTTTTATTTTGGATTCATGAAAAGCTGTTGTGAAGCTGTCTGTCTGTCAAGGATCTTTCTTACATGAAATGCATTACTTTCTCTTTCACTGTGCTCTATGGCTACTCATAAAATTCTTCAAACTTTTCTTAAATTAAACAGCAGAAAAATGGGGAGTTTATTGCCTGCTTTATTCTCGCCTGTCACCAGGTTCGATCCCCGGCAATGGTGCTCTAGAAAATGC

mRNA sequence

TCACGAGTATCTTCCAGACTGCGTGCAAGGTACGAGTACACCAGCCCATTCATCTCTTCGTTCCCTCTGAACTCTGAAGTTCGCCTCAGATCCGATCGTCGCCGGAAGGCAAGCTTCTGAGTTGTGACATTTGAAAGAAATCGAAGAGCCATGGGCCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGCAGTGGAGAAGCTCCCAATGCAGGTGCACCTAAAGGTGGCCAAGCACCACCTTCAAACGAAGGAAAGGCTGTATCCAAGCCAGCAGCGTCCAAACCAGCTGCTACTGCTTCACCACCTGCAGATGCTACCAAGCAGATTCCGGCTGGTATTCATAGTAGCTCCTCAAACAACTATTTGAGGGCTGACGGTCAGAACACTGGCAATTTCATAACGGATCGACCATCAACCAAGGTCCATGCTGCCCCGGGCGGTGGATCTTCTCTGGATTACCTGTTTGGTGGTGCTGGTGGAAAATGAAACCTGCAAAAATCATAACTGAATAGAGCTATTTGAAGACTATCCATATTATGTGAATTTTTATATGATGTTGAAGGGGCAATGTTTTTTCCATCTGAAATGATACTATGGCAGGACGATATGCTTTACAATGTGTAGATGCTTGTGGTTTCTGCTGTGTTTGTGTTGGGGTTTTATTCAATCAATTTTTATTTTGGATTCATGAAAAGCTGTTGTGAAGCTGTCTGTCTGTCAAGGATCTTTCTTACATGAAATGCATTACTTTCTCTTTCACTGTGCTCTATGGCTACTCATAAAATTCTTCAAACTTTTCTTAAATTAAACAGCAGAAAAATGGGGAGTTTATTGCCTGCTTTATTCTCGCCTGTCACCAGGTTCGATCCCCGGCAATGGTGCTCTAGAAAATGC

Coding sequence (CDS)

ATGGGCCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCACTGGGGTACCTGTTTGGCAGTGGAGAAGCTCCCAATGCAGGTGCACCTAAAGGTGGCCAAGCACCACCTTCAAACGAAGGAAAGGCTGTATCCAAGCCAGCAGCGTCCAAACCAGCTGCTACTGCTTCACCACCTGCAGATGCTACCAAGCAGATTCCGGCTGGTATTCATAGTAGCTCCTCAAACAACTATTTGAGGGCTGACGGTCAGAACACTGGCAATTTCATAACGGATCGACCATCAACCAAGGTCCATGCTGCCCCGGGCGGTGGATCTTCTCTGGATTACCTGTTTGGTGGTGCTGGTGGAAAATGA

Protein sequence

MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK

Homology

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BLAST of CmaCh05G004490.1 vs. Swiss-Prot
Match: SP1L1_ARATH (Protein SPIRAL1-like 1 OS=Arabidopsis thaliana GN=SP1L1 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 6.1e-31
Identity = 81/116 (69.83%), Postives = 89/116 (76.72%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAP-PSNEGKAVSKPAASKPAATASPPA 60
           MGRGVS GGGQSSLGYLFGSGEAP    P    AP PS+E   +S  A   P   A+   
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPK---PAINNAPAPSSETLPIS--ADPSPKHVAAQTV 60

Query: 61  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAG 116
           + TKQIPAGI+ SS+NNY+RADGQNTGNF+TDRPSTKVHAAPGGGSSLDYLFGG G
Sbjct: 61  NVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGG 111

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BLAST of CmaCh05G004490.1 vs. Swiss-Prot
Match: SP1L2_ARATH (Protein SPIRAL1-like 2 OS=Arabidopsis thaliana GN=SP1L2 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 8.7e-30
Identity = 74/113 (65.49%), Postives = 87/113 (76.99%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPAD 60
           MGRGVS+GGGQSSLGYLFGSGEAP   A    + P   E  A + P      A A+   D
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVN--KTPAETESSAHAPPTQ----AAAANAVD 60

Query: 61  ATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 114
           + KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+APGGGSSLDYLFGG
Sbjct: 61  SIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGG 107

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BLAST of CmaCh05G004490.1 vs. Swiss-Prot
Match: SP1L1_ORYSJ (Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0417800 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.1e-27
Identity = 76/115 (66.09%), Postives = 81/115 (70.43%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPP-A 60
           M RG S+GGGQSSLGYLFG  EAP   A     A P+         A + PA   SP  A
Sbjct: 1   MSRGGSAGGGQSSLGYLFGGNEAPKPAAKPAPAAAPAPAPAPAPAAAVAAPAEKPSPAKA 60

Query: 61  DATKQIPAGIHSS-SSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 114
           DATKQIPAGI  S S+NNY RADGQNTGNF+TDRPSTKVHAAPGGGSSL YLFGG
Sbjct: 61  DATKQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLGYLFGG 115

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BLAST of CmaCh05G004490.1 vs. Swiss-Prot
Match: SP1L3_ORYSJ (Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica GN=Os12g0502000 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.3e-27
Identity = 73/114 (64.04%), Postives = 82/114 (71.93%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPA-ASKPAATASPPA 60
           MGRGVSSGGGQSSLGYLFG GEAP                K+  KPA   KPA ++S  A
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEAP----------------KSAEKPAPVQKPAPSSS--A 60

Query: 61  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 114
           +  K+IPAGI SS +NNY+RA+GQN GNF+TDRPSTKV AAPGGGSSLDYLF G
Sbjct: 61  EKLKEIPAGIQSSKANNYMRAEGQNCGNFLTDRPSTKVQAAPGGGSSLDYLFSG 96

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BLAST of CmaCh05G004490.1 vs. Swiss-Prot
Match: SP1L2_ORYSJ (Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica GN=Os11g0629400 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-25
Identity = 72/112 (64.29%), Postives = 78/112 (69.64%), Query Frame = 1


Query: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPADA 61
           GRGVSSGGGQSSLGYLFG GE   A   K   A       A  K AA   AA+ S  A+ 
Sbjct: 4   GRGVSSGGGQSSLGYLFGGGETAPAAKAKPAAAAEKETTPAPVKKAAVAAAASPSA-AEK 63

Query: 62  TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 114
            K+IPAGI S+ +NNY RA GQN GNF+TDRPSTKVHAAPGGGSSL YLFGG
Sbjct: 64  MKEIPAGIQSTQANNYFRAQGQNCGNFLTDRPSTKVHAAPGGGSSLGYLFGG 114

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BLAST of CmaCh05G004490.1 vs. TrEMBL
Match: A0A0A0KFN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G366520 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.6e-46
Identity = 104/118 (88.14%), Postives = 109/118 (92.37%), Query Frame = 1


Query: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQA--PPSNEGKAVSKPAASKPAATASPPA 61
           GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PP +E K +SKPA SKPAATASPPA
Sbjct: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPA 62

Query: 62  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 118
           D +KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

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BLAST of CmaCh05G004490.1 vs. TrEMBL
Match: M5XNQ4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012233mg PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 5.7e-36
Identity = 90/118 (76.27%), Postives = 95/118 (80.51%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAAT--ASPP 60
           MGRGVSSGGGQSSLGYLFGSGEAP   A     AP  NEG+ V+   ASKP A   A  P
Sbjct: 60  MGRGVSSGGGQSSLGYLFGSGEAPKPAANNTQAAPIPNEGRVVTNEPASKPTAPPPAPEP 119

Query: 61  ADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGG 117
            D TKQIPAGIHS+SSNNY+RADGQNTGNFITDRPSTKVH+APGGGSSLDYLFGG GG
Sbjct: 120 VDITKQIPAGIHSTSSNNYMRADGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGPGG 177

[Close]

BLAST of CmaCh05G004490.1 vs. TrEMBL
Match: A0A059D7D9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03146 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.4e-34
Identity = 88/115 (76.52%), Postives = 91/115 (79.13%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPAD 60
           MGRGVSSGGGQSSLGYLFGSGEAP A A     AP       V  P  SKPA   SPP D
Sbjct: 129 MGRGVSSGGGQSSLGYLFGSGEAPKAAASSPQTAPAE-----VDNPPPSKPAVV-SPPVD 188

Query: 61  ATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAG 116
            TKQIPAGIHS+SSNNY+RADGQNTGNF+TDRPSTKVH APGGGSSLDYLFGGAG
Sbjct: 189 VTKQIPAGIHSTSSNNYMRADGQNTGNFLTDRPSTKVHNAPGGGSSLDYLFGGAG 237

[Close]

BLAST of CmaCh05G004490.1 vs. TrEMBL
Match: W9QNX4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026438 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.3e-34
Identity = 86/116 (74.14%), Postives = 94/116 (81.03%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPAD 60
           MGRG SSGGGQSSLGYLFGSGEAP     K   A P+NE +AV+   ASKP A    P D
Sbjct: 1   MGRGNSSGGGQSSLGYLFGSGEAPKPATNKA--AAPTNEVRAVNDVPASKPTAAPPQPVD 60

Query: 61  ATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGG 117
            +KQIPAGI+S+S+NNY+RADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG GG
Sbjct: 61  VSKQIPAGINSTSTNNYMRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGPGG 114

[Close]

BLAST of CmaCh05G004490.1 vs. TrEMBL
Match: A0A061E9M7_THECC (T1K7.26 protein OS=Theobroma cacao GN=TCM_011514 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.0e-32
Identity = 87/116 (75.00%), Postives = 91/116 (78.45%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPAD 60
           MGRGVSSGGGQSSLGYLFGSGEAP  G  K   AP   E  AVSK A +   A A  P D
Sbjct: 1   MGRGVSSGGGQSSLGYLFGSGEAPKPGTNKPQAAP--TEAPAVSKSAPAPAPAPAPEPVD 60

Query: 61  ATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGG 117
            TKQ PAGI+S+S+NNYLRADGQNTGNFITDRPSTKVHAAPGGGSSL YLFGGA G
Sbjct: 61  ITKQTPAGINSTSTNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLGYLFGGAPG 114

[Close]

BLAST of CmaCh05G004490.1 vs. TAIR10
Match: AT1G26355.1 (AT1G26355.1 SPIRAL1-like1)

HSP 1 Score: 134.8 bits (338), Expect = 3.4e-32
Identity = 81/116 (69.83%), Postives = 89/116 (76.72%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAP-PSNEGKAVSKPAASKPAATASPPA 60
           MGRGVS GGGQSSLGYLFGSGEAP    P    AP PS+E   +S  A   P   A+   
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPK---PAINNAPAPSSETLPIS--ADPSPKHVAAQTV 60

Query: 61  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAG 116
           + TKQIPAGI+ SS+NNY+RADGQNTGNF+TDRPSTKVHAAPGGGSSLDYLFGG G
Sbjct: 61  NVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGG 111

[Close]

BLAST of CmaCh05G004490.1 vs. TAIR10
Match: AT1G69230.1 (AT1G69230.1 SPIRAL1-like2)

HSP 1 Score: 131.0 bits (328), Expect = 4.9e-31
Identity = 74/113 (65.49%), Postives = 87/113 (76.99%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPAD 60
           MGRGVS+GGGQSSLGYLFGSGEAP   A    + P   E  A + P      A A+   D
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVN--KTPAETESSAHAPPTQ----AAAANAVD 60

Query: 61  ATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 114
           + KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+APGGGSSLDYLFGG
Sbjct: 61  SIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGG 107

[Close]

BLAST of CmaCh05G004490.1 vs. TAIR10
Match: AT2G03680.1 (AT2G03680.1 spiral1)

HSP 1 Score: 106.7 bits (265), Expect = 1.0e-23
Identity = 75/122 (61.48%), Postives = 82/122 (67.21%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAP-----PSNEGKAVSKPAASKPAATA 60
           MGRG S GGGQSSL YLFG G+AP   APK   AP      SN G A    A +  A T 
Sbjct: 1   MGRGNSCGGGQSSLDYLFG-GDAP---APKPVPAPRPAPTESNNGPAPPVTAVTATALTT 60

Query: 61  SP----PADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLF 114
           +     PA+  KQIPAGI  +  NNY RA+GQNTGNF+TDRPSTKVHAAPGGGSSLDYLF
Sbjct: 61  ATTSVEPAELNKQIPAGI-KTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLF 117

[Close]

BLAST of CmaCh05G004490.1 vs. TAIR10
Match: AT3G02180.1 (AT3G02180.1 SPIRAL1-like3)

HSP 1 Score: 93.2 bits (230), Expect = 1.1e-19
Identity = 57/111 (51.35%), Postives = 71/111 (63.96%), Query Frame = 1


Query: 3   RGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPADAT 62
           RGV++G  +SSLGYLFGSG+  +A A   G    +      +     +P  T +      
Sbjct: 5   RGVNNGVNESSLGYLFGSGQPSSAAAATMGTTTTTTT-TTTTDGTGGRPITTTTTTVTDN 64

Query: 63  KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGG 114
           K+  AG+  S  NNY R++GQN GNF+TDRPSTKVHAAPGGGSSLDYLFGG
Sbjct: 65  KKTSAGVRGSP-NNYFRSEGQNCGNFLTDRPSTKVHAAPGGGSSLDYLFGG 113

[Close]

BLAST of CmaCh05G004490.1 vs. TAIR10
Match: AT5G15600.1 (AT5G15600.1 SPIRAL1-like4)

HSP 1 Score: 90.5 bits (223), Expect = 7.4e-19
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 1


Query: 3   RGVSSGGGQSSLGYLFGSGEA---PNAGAPKGGQAPPSNEGKAVSKPAASKPAATASPPA 62
           RGV+SGGG+SSLGYLFGSGE+   PN    K G    +      +  A  +P  T +   
Sbjct: 5   RGVNSGGGESSLGYLFGSGESVPKPNKPNAKTGFTTTTTT-TTTTDGAGGRPKTTTTTTT 64

Query: 63  ----DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFG 113
               + T++  AG+  S  NNY R+DGQN GNF+T+RPSTKVHAAPGGGSSL YLFG
Sbjct: 65  TGDKNKTEENSAGVRGSP-NNYYRSDGQNCGNFLTERPSTKVHAAPGGGSSLGYLFG 119

[Close]

BLAST of CmaCh05G004490.1 vs. NCBI nr
Match: gi|659089321|ref|XP_008445444.1| (PREDICTED: protein SPIRAL1-like 1 [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 8.4e-49
Identity = 109/118 (92.37%), Postives = 111/118 (94.07%), Query Frame = 1


Query: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQA--PPSNEGKAVSKPAASKPAATASPPA 61
           GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PPSNEGK VSKPA SKPAATASPPA
Sbjct: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPSNEGKTVSKPAVSKPAATASPPA 62

Query: 62  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 118
           D TKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 63  DITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of CmaCh05G004490.1 vs. NCBI nr
Match: gi|449452849|ref|XP_004144171.1| (PREDICTED: protein SPIRAL1-like 1 [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 2.3e-46
Identity = 104/118 (88.14%), Postives = 109/118 (92.37%), Query Frame = 1


Query: 2   GRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQA--PPSNEGKAVSKPAASKPAATASPPA 61
           GRGVSSGGGQSSLGYLFG G+APNAGAPKGG+   PP +E K +SKPA SKPAATASPPA
Sbjct: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPPPSEAKTISKPAVSKPAATASPPA 62

Query: 62  DATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 118
           D +KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK
Sbjct: 63  DISKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 120

[Close]

BLAST of CmaCh05G004490.1 vs. NCBI nr
Match: gi|645277568|ref|XP_008243832.1| (PREDICTED: protein SPIRAL1-like 1 isoform X1 [Prunus mume])

HSP 1 Score: 158.3 bits (399), Expect = 8.2e-36
Identity = 90/118 (76.27%), Postives = 95/118 (80.51%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAAT--ASPP 60
           MGRGVSSGGGQSSLGYLFGSGEAP   A     AP  NEG+ V+   ASKP A   A  P
Sbjct: 13  MGRGVSSGGGQSSLGYLFGSGEAPKPAANNTQAAPIPNEGRVVTNEPASKPTAPPPAPEP 72

Query: 61  ADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGG 117
            D TKQIPAGIHS+SSNNY+RADGQNTGNFITDRPSTKVH+APGGGSSLDYLFGG GG
Sbjct: 73  VDITKQIPAGIHSTSSNNYMRADGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGPGG 130

[Close]

BLAST of CmaCh05G004490.1 vs. NCBI nr
Match: gi|596288440|ref|XP_007225937.1| (hypothetical protein PRUPE_ppa012233mg [Prunus persica])

HSP 1 Score: 158.3 bits (399), Expect = 8.2e-36
Identity = 90/118 (76.27%), Postives = 95/118 (80.51%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAAT--ASPP 60
           MGRGVSSGGGQSSLGYLFGSGEAP   A     AP  NEG+ V+   ASKP A   A  P
Sbjct: 60  MGRGVSSGGGQSSLGYLFGSGEAPKPAANNTQAAPIPNEGRVVTNEPASKPTAPPPAPEP 119

Query: 61  ADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGG 117
            D TKQIPAGIHS+SSNNY+RADGQNTGNFITDRPSTKVH+APGGGSSLDYLFGG GG
Sbjct: 120 VDITKQIPAGIHSTSSNNYMRADGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGPGG 177

[Close]

BLAST of CmaCh05G004490.1 vs. NCBI nr
Match: gi|645277571|ref|XP_008243833.1| (PREDICTED: protein SPIRAL1-like 1 isoform X2 [Prunus mume])

HSP 1 Score: 158.3 bits (399), Expect = 8.2e-36
Identity = 90/118 (76.27%), Postives = 95/118 (80.51%), Query Frame = 1


Query: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPPSNEGKAVSKPAASKPAAT--ASPP 60
           MGRGVSSGGGQSSLGYLFGSGEAP   A     AP  NEG+ V+   ASKP A   A  P
Sbjct: 1   MGRGVSSGGGQSSLGYLFGSGEAPKPAANNTQAAPIPNEGRVVTNEPASKPTAPPPAPEP 60

Query: 61  ADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGG 117
            D TKQIPAGIHS+SSNNY+RADGQNTGNFITDRPSTKVH+APGGGSSLDYLFGG GG
Sbjct: 61  VDITKQIPAGIHSTSSNNYMRADGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGPGG 118

The following BLAST results are available for this feature:

BLAST of CmaCh05G004490.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SP1L1_ARATH	6.1e-31	69.83	Protein SPIRAL1-like 1 OS=Arabidopsis thaliana GN=SP1L1 PE=2 SV=1	[more]
SP1L2_ARATH	8.7e-30	65.49	Protein SPIRAL1-like 2 OS=Arabidopsis thaliana GN=SP1L2 PE=2 SV=1	[more]
SP1L1_ORYSJ	4.1e-27	66.09	Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0417800 PE=3 SV=1	[more]
SP1L3_ORYSJ	5.3e-27	64.04	Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica GN=Os12g0502000 PE=3 SV=1	[more]
SP1L2_ORYSJ	2.2e-25	64.29	Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica GN=Os11g0629400 PE=3 SV=1	[more]

BLAST of CmaCh05G004490.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFN2_CUCSA	1.6e-46	88.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G366520 PE=4 SV=1	[more]
M5XNQ4_PRUPE	5.7e-36	76.27	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012233mg PE=4 SV=1	[more]
A0A059D7D9_EUCGR	1.4e-34	76.52	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03146 PE=4 SV=1	[more]
W9QNX4_9ROSA	5.3e-34	74.14	Uncharacterized protein OS=Morus notabilis GN=L484_026438 PE=4 SV=1	[more]
A0A061E9M7_THECC	1.0e-32	75.00	T1K7.26 protein OS=Theobroma cacao GN=TCM_011514 PE=4 SV=1	[more]

BLAST of CmaCh05G004490.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G26355.1	3.4e-32	69.83	SPIRAL1-like1	[more]
AT1G69230.1	4.9e-31	65.49	SPIRAL1-like2	[more]
AT2G03680.1	1.0e-23	61.48	spiral1	[more]
AT3G02180.1	1.1e-19	51.35	SPIRAL1-like3	[more]
AT5G15600.1	7.4e-19	52.14	SPIRAL1-like4	[more]

BLAST of CmaCh05G004490.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089321\|ref\|XP_008445444.1\|	8.4e-49	92.37	PREDICTED: protein SPIRAL1-like 1 [Cucumis melo]	[more]
gi\|449452849\|ref\|XP_004144171.1\|	2.3e-46	88.14	PREDICTED: protein SPIRAL1-like 1 [Cucumis sativus]	[more]
gi\|645277568\|ref\|XP_008243832.1\|	8.2e-36	76.27	PREDICTED: protein SPIRAL1-like 1 isoform X1 [Prunus mume]	[more]
gi\|596288440\|ref\|XP_007225937.1\|	8.2e-36	76.27	hypothetical protein PRUPE_ppa012233mg [Prunus persica]	[more]
gi\|645277571\|ref\|XP_008243833.1\|	8.2e-36	76.27	PREDICTED: protein SPIRAL1-like 1 isoform X2 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh05G004490	CmaCh05G004490	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh05G004490.1	CmaCh05G004490.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh05G004490.1.three_prime_UTR.1	CmaCh05G004490.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh05G004490.1.CDS.2	CmaCh05G004490.1.CDS.2	CDS
CmaCh05G004490.1.CDS.1	CmaCh05G004490.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh05G004490.1.five_prime_UTR.2	CmaCh05G004490.1.five_prime_UTR.2	five_prime_UTR
CmaCh05G004490.1.five_prime_UTR.1	CmaCh05G004490.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh05G004490.1.exon.3	CmaCh05G004490.1.exon.3	exon
CmaCh05G004490.1.exon.2	CmaCh05G004490.1.exon.2	exon
CmaCh05G004490.1.exon.1	CmaCh05G004490.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33403	FAMILY NOT NAMED	coord: 1..113 score: 6.1
None	No IPR available	PANTHER	PTHR33403:SF1	PROTEIN SPIRAL1	coord: 1..113 score: 6.1