CmaCh04G018730 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G018730
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	DNA repair XRCC2-like protein
Location	Cma_Chr04 : 9529731 .. 9542792 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGAGTTCCGGCCAAATAAGGGCGTTGCAATGGCGCTCCGCCAGTGGATCGACGGCGATGAGAGCGCCGCTGAGATGCTTACTAGAGTCCTCAAAGAGCGAACCTCCTTGCTTGTTCCGCCTCTCCACAGAGTTCCTCTCCACGTCGGCAATGTGGTCGAGCTTGTTGGACCCTCTGGTTCAGCCAAGACGCAGATCTTAATCCAGGTCCAATTATCAAGTTGAATTTGTCCATTTGAACTTCTTGCACCGTTTATGACAAATTGTTGGTTCACCTCGAAAGCATTTGGGAACAATTTGTGGGATATTAAAAGTAGACTGCTTCTGTGAGCAGGCTGCAGTTAATTGCATTCTTCCCAAGGAGTGGAATGGGATCCGCTATGGAGGCTTGGAGTGTTCAGTGGTGTTCATTGACTTGGATTGTCGTCTTGACATCTCAAGGCTTTCCCAAGTTTTGAAGCTTCGAATTTTGGAAGGAAATGGCAACGGTGAACTACAATTACCTCTTTGAGTTATTAATCCGTACATGTGCTTCTGTTATACATTTGATATAGAGCTAGTCTTGATGATCGCTATTCTGCTTGCCTAATAAGAAAATAGCGCTCTCAGTAAAATATTAGTTATTTACTATTTTTCTTGGAGGATTCTATTTCTTTGATGTGCACACAGAATATCGAAAGAAAAATAACCCTGCTTATATTCAAAGATATCTATGGAGAATCTCCAAGAAAGATTGGAAATCTAGCTTCCAATCACCATTTAAGACAATGATTGGTTCAAACTCTGGCTTGGAGATGAAGAATTTGACGACCTTGAAGGTCTTCACTGCTTAATCTGTGTTTTCACAGGTCTTTGTCCGGTAGGGAGGCTGGGGATATTTGATCTTTACTTTCTTTGTTGGATTCAGTCTGTGCAAATGTGGGGGAGTGGGAACTTTTTCTCTGGATCCCTTTGACCCTATGAAGGGTTTTTCCTGTAAATCCTCTTTAATCTTTTGTGTGACTCTCACCATCCTTGATCTTTATTTACCTTGTTATGGAGGTTTAAAGTGCCCAAGAAAATCCTCATTGCTTATGGTTTGAGCGGAATGGGAGAGTTTCTTGAACCCCACTTTTTGTATATCTAGTTTGAGGTTTGGAAGTTCCTTTTATGTTGGGCTGTTTCTTTCTATGCCCTTCATTATTCTCTCTCTTTTCTTGATGAAAGTAGCTTTTGTGATTAACTAAGATGGGGGAGCTTTCATGCCAATAGCTCCAGTATACATGTTGTTCCAAGATTTGCTACACAGTTGGTGGAGAGGTCATCCATAATCAATAATCACTTGAGAAATATTGTTGGCTGTTTTTTGGATGGGGAGATAGAGAAATTGTGGACTTTGTATCTTTTGAGCATTAGTTTTATTTCACTTATCCAATGGAAAGTTTCATTTCTCGTTTAAAAATAAAAAAGAAAACAATGGCAAACCACAATTGCAAGTAGAGTATGGGTTCGTGAAAGAGTTTGAGACTGTCTTTTCTGTCTTTCCTAGTTTTGATGTTCCTAAAAACATTTCTTACTGTTTTCATGTATCCTAATGAAGACGCAGCTTGCTTAAGAAATATTGTTGTCTGACTCTTGGGTGGGGAGATGGGGAACTTGTGGACTTTGTACCTTTTGAGCATTAGTTTCATTTAACTTATCCAATAGAAAGTTTCATTTCTCGTTAATAAAAAAAAAAAAGGGAAACCACAGTTGTCAAGTAGAGCATCATTTGCTGAAGTAGTTTGAGACAGTATTTTTTTGTTTTCCCTAGTTTTGATGCTCCTAAAAAGATTTTTACTATTTTCATGTATCCTAATGAACACGCAACTTGTGTCTCGAGAAAAGATAGATGAATCTAAGTGTTAGGCAAGTAGCTCAGAGTAGTGAAAAAGTGTAGAGGAAATAATCCATAGGGTATTAGAGGGAAAAATAATTGGGAAGATGTTATAGACACAAAAGGGGACAGAAGTTTTGGTACAGAGGAGATTCGATGTCACGGAAGATTTTCATTAAAATAAAAAATAAATGGCTACATATATTGTCCATCTTCAAGGCTTTCCCTCTTTGTTACTTACGAATGAGAAGAAGATGTCATTGTATTTCTTGTATATTATGAATTAAATACGAGGCTTTCTTATATGGAAGAAAAACCATCTACCAATAAGGAAGAAAATCTTACAGATTAAAATAATAAGTATATACATAATGCACATCTAATATTACAAAATATAAAGAAACACTCCACCTTAAGCTGACTTATAGATGTCTTCCACAGCCAACGAAGTTGATCGAATTGTCCTTTCAAGAGCCCTTTAGTTAGAATATTAGCCGTTTGTTATGTCGTTGGAGATCAGATATGCATATTACATATGCAGCAATCTTCTCCTTTATGAAATGCTTCTAAACTTCAATATGCTTCATTCTATCAGTAGAACTAGATTGTGAATTATAGCAATGACAGTCTTGTTGTCACAATAGACGTGCATAGGTGTCTTTTGAGACAATTTCAGTTTTTCAAGGATTCTGTTAATCCATATAGTTTCACAAATTCAATTGGCTAAGTCTCTAAATTGACTTCAACATCACTCCTGGCCACTGCATTTTGTTTTTTTTTACCAAATCATGTAATAAATTTCCTCCAACAAAAGAACAATAAGCAGAAGTAGATCTTCTATCAGTAGTACTTTCAACCCAATATGTATCAGTGACACTTCAACTTGGAAATGGTTATGTTTCTAAAATAATATATACCTAGAGTTTCTTTCAAATACCGTAGGATTCTTTACAACTTGCTATTATCAGTAGTACTTTCAACCCAATATGTATCAGTGACATTTTGAGCTTTTTTTTTTAAAGAAAATGATAAGGGATTCTCCATTCTTCCTCTTTGGTGCCTAGCAAATTTGTATCTCATATTGAAGCTTGTGGTCTTGAATTACGGGGAATTCCTCCTTCAACATTTTAAGGACTCCTTTTTTTACTAAAGTTTCCAGAGAGCTTTTTTTGGTCTTTACCTTTTCTTTTGGCAATTCAAGTTTTGGGGTTCTCGTTTGTGGAGAATCTCAGCTGGTTTGTTAGATCTTTTTTGGGCTGAGGACTTTAGCCAACTTTTTCTTGTATTTTCTTATTTTCAGTTGTTGTGTTCAAGTTCTCTTTGGAGTTGAGCTTTTGTTTGATGAGTCCTTTTTGTTTTTTGGTCGTTCTTTTTAGATCTTGTTCTGTTTTCTGGTCCTATTTTCTGGTTCAATTTTCTTTTTCACTACCTTTGGGAGTTTGTATGTTTTGATCATTCTCCTTTTCATTTTCATTATATCCCCAATGAGAAGTTGTTTCTTGTTAAAAAAATGTATTTGATAAGCCACACAAACGCAGGAGATTGGGGAAATTTTGATGCACTATATACTACATGCCTGAGAAGATTCTTTTACATCCGTTGCTATGACAGTTTTGAATTTCTTGCCACTCTCAAGGTAAATTTCTTCTTATTTAAAACAAAGTTAGCCTTCTTCATGCATTTCATTCACATACCTTTTTTTAAGAAACAGATTTCATTAATAAATGAAATAACAAAAAGGAGTAAAGCCTCAATCTATAAACCAAAGAAGTTGTTAAAACTATATGTAAAAAAATTAAATTTAACATAACTTAACTTATAGTTTTCAGTTCAATGGTAGCTCTCTCCAATTCATATTGATTTCCACTTGTTGTGTCTGCAACCACAAGTGAGGACACTGTCAAATTGTATTTAATAGTATATAGGTAAATATAGGAGCTTATTCGTCTTTCTTCATTTATTGTAATTTTACTATTATTGGTTTAGGACTTCCATGTGTACTAGTATATACTCTGCTATATAGATCATGTATTATCCTCTACTATGCAAATCATGTATTATTCTCTACTATATAGACGATGTATTATTCTTCCATATTTGGTCTCACAATAACCCAAAACTAAATATATCATAACACATCAGCCTAAACTTTTGTGTTCAATGGTGATTTTACCGTGAATGAAAAAGCTTTCAATTGATGGATAAAAGGATATAATTACATAACAAGGGATAGCAAGATTCTCTATTGGTCTCCCTTCTAACTTCGTTTGCTACTTGAGATTTCCCCCTTTAAATTAAATCTTTGGAATGCTAAGATCTCAAAGAATGCTAGAAAATGAATTACAAGGACAATTGATTTTTTCTCGAAAAGTTACTAATTTGAAGTATGACAGAATGCTAAAAAACACTGAGTAACAATGAGTCAGCCTACCTTCATAATTGAAATCTCTTCCACTAGTCAATTTCATAATTTACTCCATGATGGGCCACCAAAAAGAAGCAGTCTAAGGTGACCTCCTAGTGGAAGACCAAGATAAGGAAAAGTAAGGATTCAACCTTACAGTGAAGCCTGGAGGCTACAAGAGACAGCTTTGGTCTTCTATATTAACCCTCATATGGCAGATTTAGCTGAATATATTCTAAAACCTAATAGGCATTCCAAAAACCTGGTGGCCGTTAAAAATTTCCCTCTGTTTTTCTAATAAAAGAACTGTTTTGATTCAAATATCCAGCATCTTCAATCTCCTGTTTTTATCCACCGTTGTACTTCAAGTTGGCTCTCTATAATTTTGTGCAACCTCCATTGTGTACAATTTGTCTATATAATTCTTTAGACCTTTTGAATTTCAGACCATGCACCATAAACTTCAAAAAGAAAGAGATGACCTTGGAATTGGGTTGCGTCTACTCATGATCGACAGGTTTGTGCTAAAAGTAATTTGGAATCTCGTGATGCGTCTCCTGCTAGATAGAGTTTTCAATTTCTTCTTATTTGTCGATTTATTTCATGAACATAAAAGATAAAGATGTAGGCATTCTTATGTTTTTTTTTTTTCTATCTTCCTCTGCCATGCCATTTATGCCAAAGGACTTCAAATTGGTTTTGCTAGTAAGAGTACTGTAGAAAATACTCTTCACACACTTTCGTTGTTCTTTTTTTGGGGGATGGGAACCAATTTTAAGTTAATTTTTTTTTTTTATAATGACTCTTCTGGCCACGGGATCCTCATTGATAATGCCATCCTCCAATTGTTTATCGATCACAACAAGTTCATGGGGAAGAAAATTTTCTGCGAATTGGTATTGCCGAAGGTGTTTTGGTTCCATTCTTGTAGTGTTATTTTGAGGTCTTTCAATTTCTTTATGAACCCATGCCCTGGCACCATCAGTCCTCAACAAAAGGCTAGAATAACTTGTGTTCCAACCACATATTTTGAACTTAATGGGGAAGGACCCTTGTTTGGCTGCCAAGAGTTTAGGTGGCCATTAGATTGAAATTCCTCAAATAACCTTTGAAAGTCTTGCAAAAAGTACTGATATTTCAAGAAAATTCAATTGTGTATCCATCAGGGCCCAATGCCTAATTCTTAGGTTTTTCATTTCCATTCTTGTTCTTCTAGAGAAAATGGAGCAATAAGAACAGATTTTTCTTTTGATAAGAATACAAGAAGACACCGTAGACCAGCAAAGATTAGAAGGAGTAGTACGAATGCCTGGGTTTTTTTTTTATATAAAGAAGAGAAGACCACAGAATTTCCTCCTGCTCAAATTCTCTTTAAGCAAGAAGCGAAGATCCAGTAATAGAAAACAGTTCTGAAATCAGATTTTTTTCTCTCTTTTAGCTGCCAAGAAATGATGTAAGAAGCTTTCATCACCCAATTTTAATCAATGCAACTTACATTTATTAATCCAATTTCTTTCCTCAGAGAAATAAAACTCCATAATTTCACCTTTAATCGCAATTCTGATGTCTAGCTCAGAGGAGATAACACATTAGTTTCTGATTTTGCATCAAAGAACTCCAGTTCAGGTATGAGACTTGGTTCCTTTCTTTTCCTTTGTGTTTTAAATTCAGCACATCATTTCTTGATATCTTCTATTAATTTTCTGAGTTTTGAACTAATAAAAAATCCAGCCCATCCTTGAGAACAATCTTGAACAAGGGATTTCTCTATAACTTTTCCATATTCCGAATGAATAAGCCAACTGTTGTAGAACTGAAAAGGGGAAGGACCCCAAATGAATGCTCCTGCTTCAAGTAACAATGGAAAATGATCTAAAATGTGCAAGCTTGTCTAGATACTCTGGAGTTATCAAACAAACCCTCCCATATTTTTGGTCAATGATCTCTATTTCTGCTGGAATAAAACCACAAAAAATTTTCTTCTCTTGAATTCTAAAAGCTGAACAATCCATGCAATTAGGAGTATGATAAGATATACTAACTAAACCCCCAAAATGCTGCCCAGTTTCTTCAACAATATCTTTTCCCGCAAGGCAAATGAAGCTTTTTCAAAGAAATCCAACCACCATATCCTTCAATCAGCTTAGGATGGGAACGATCATTTTGTGACCATTTCTCAATTTTCAGATGGAAATTACCAATTTGCCTCCACTTACCGTCAAATTCAAAATCTGAAAATTCATCATTTAACTTCAACTTATCTGCCATAAATGGATTGATTAAAACTTTGGATTGCAAAGAGAAAATTGAATATCTTTCCCAGAGTTCTGGGCTAGCAATCTGGATAACAAAAATGAATTTAAAAATCTTTCACCTACATCATTGTCTTTCCTAACCCAACATTAGAAAAGAGGAGTCTTCTAGGATGAAAACTAACTGTGGGGCTGCAATAGACAAGAACATTATAATTTTCTATTTTGAAAAAAAGAAAAATCCCAAATCGATAAAAAGAATAGCAAAAACATTTAGGTTAGAAAGGAATGGCCAAAGAATCTCCAAAGTTAGTAACTTGTAATGGCGGTTAAACACAAGGTTAAGCACAAAATTACATTTATTAGTGGCAACTAGTCAATGGTGAAGCCTAGCATGACCCACGACGAGGTAGTCTAGCGATAATGTAACTACAATGATGGACTCTGGTGACAATGTGACCTATGTCGATGAATCCCTTCACCCTCGAGGTGAATCTCTTGTTTGACGACGAGTCTCCGATGGTGCCCAAATCTTGATGGCCGACACCTCCAATGTGCTCTACATATTTCCTGTGACGGTGACACTAGACATGCCAGATCATTGGTGAACACACCTACGACCAGCTACTTGTGACAGCCAACCTTTAGCATGACCTGTGTGCCTACAGCCCTCTGCGGCAGGCCATATTTGCAAATTTGAGGCCTCTCCTTATGAAGGTTGAGACCTACGCCAAGCAGTCCAGTACCGTACATTAGTTTTCCTCAGTCGCAGGGGACTTGCCATCTTCTCTCTTATGGATTATCCTAGCAACAGCTCACTCGAGAAAGGGAACACAATAAATGGCTTTTCCATTTTCTTAGTCATAGGGATGGCACCATCTCCTCCACCTCTAAAACTCAACCATTATCGATAGAAAGACCTATTTAATTGAGCTAAATGACAGATGTAGGGAAACAAGAATAAAATTATCAATGATCACCAGAGACGAAGCCTTTTTCGCATCACTCAAATGATGGCTAATAACATCTTACCAGGCCCTACTATCAGCCCCCACTGAATCGAAGTTCTTCAACGTTTTCCAAAATATACCATTTGGATAGAGAAACTCATCAACTAGAAGGGTACTATGGTTGATATTTCTCAGTTCCATAGAAATAGTGGTCTTAGTTAACTTTTTGTTCCAGTGAGTGTTGAACAAAAATGATGGACAGCCTTCCTCAACCTCATTGAAGATTAGCCTCTTTCATCCACCAAAAAACTTCTTCAACAACTAAAACCCAATCAATTTCAGAAAAAGAAGCCAACCACAAATACGCTTTCCGTCCCTTGCCTTCCATAAAAAAAAATCCATCACATAAACTAGAAAATCCCTATACAGAAACAAACCTTTCGATCCTCAACAAAAAGGGCAAGACAGTCATCACAGAGTTTCCCCGCTCCCTTGTTCCTATTGTTTGGGATACAGTGGCGATCATCATCACCTGTAAAGAAAATAGAGGTGTCCATCTCTTGATAATAGTCAAAGATTGAGCTTTTCCTTGCTCCTGTCTTTTAGGTTGCTTCTTTTCTCTTTTTTTATAACGCTACTTCAGGTTTCTTATAAAAAGGAAAGGAAAAAAGGTTGGAATTGTATTAAGGTGCACATATGTGAGAATTATAAATCTTTTCTTCAGCTCAACGTACTGCGCTTGCCTAATTTCTTATTGTATAGCCAATTGTATCTATAAATGTTGAATTTGGGAATTATTTCTTTCTTCTTTCTGTTTAGTATTGGAGCTTATCATTGGGTTGATCGTGTCTCTTCATCCTTGCCTTTGTGGGGTTACAACAGGTAGTGCCTTCAAATTTTAAATTGTTTAATTATATATTTATAGGTTTATGCGCACTTGTCAAATTAGAATTCTCACTAAATTTTGGGAAAAGGAGATTATTAGCTGCCATTTTAAACTTTTTCAGGCATTCCAATTTAAGTCTTGCATGAGCTTCTTATTGTGAGTTACTGATGGAGTAGGGTTTGCGATAGAGAAAGTCTCCAGTTACTTTTTATCATGTGATTTGTGCATCAGAGTCAACTATCCAAATCTCCTTTATAGACATTTCTTAAGAAATATTTTGATTTTTTTCTTTTTCATTCGGCTCCTGACCTATTTCTTAGTCCCTCATTTTCCTTGGTTGATTTTTCCCCTTACAAGTGTGCCTAAACTTTCTCATGCATTTTTACAAATTCGGAGGATATTACTTCATTTTAATCTCACTCTCTATTTGACGTACAAGAAAGTTGATTAGACATACTAGGAATGTTTGGTGGTTTCTGCTGCTTTGATTAGTTCTTTTACAAGGTTTAATAGCATCATCTCTCTTTCTATTAAAGAACAGATTAAACATCCTAGTCTAGGATATCCCAGTTTTTCTCTCTCAAATACTTATTTCCAAATCATCTCTTCGAGTTAACGTCTCAAGCTCCATTTCCTTCCTTTGCAGGGGTTGACTTTATCTCCCTGGTCTATAAATTTTGTAGGCTCCCTCTTATTTTCATTGACGTGATTGTTTCTTATTAGAAAGAAAAATAGAAAACTATTCCCCCTACTATTTCATATAGATACCATCAATAATAAAAGAATACTAAACTACACCTCATACAAGCCAATGGTAACTTTTTTCTCGCATGCATAATTTTGTGAGAATCATCCAAAAAAAAACGTGTTTCAACAATGTACAATTGTGTTCTCATTGTTATGTATTCCTAGTGTTATGACAATTTTATGTATTTACTCTCTCAGGAAAGGCTTTTCTCTTGCAAATATGTTAGAAGCGGCAGTAGAAGAAATTAAAAAGCTTTTGCTGGTGCATCCGAGTATTGTTATTGCTTCAAAAGCTACCATTTTTGGGGATAGATCTTCTGACATAGTTAGACGGTGAGTTTAAGGCCCAAAGGGACTTTTTTTTCCCATATGTGAAACAAAAAGTTGCATAGCATAGTCTTAACTCTTGAAGAATTATGTTTCTTGTACTTTACTGCCTAATTCGGTATGCTTTACAAGATTGGTGATATGTGCCTAGTCTTAACCGTTTCATATTTGAGATATGAATGCTCGCTCTGATCCATAGACTTGCATGCTTCTTTCACGTGGTCGAGTACTTTAATAACTTGTTACAATTCTCTAAGACTATTATGCTTCATATTGCTTGAAGACTTGCTTCGCGAATTGGGAGATCTATGATATGAATCTACGTATCACCAATTCTTTTGTTATTCTTGCCCATGTTTTGGTTGCTTCATTTTCAATTTCTCTTTTCTTGGATAGGAAGCAACTACCTTCATTGGTTCTTCCATCAAAAGAAAAATAAAGAAGAATAAGGAGAATGATGTTATGCTATATGGTGTGACCTTGATTTCCAAATTGATGAACTTTTCAGGTATTGATATGAGTTGGAAACTGTAAATTTCACTTCAACTATATTTAGTCTTTTTTAAAACAAGATTTCATTGAGATAAATGAAAGAATGCAAGACATATAAAAAACAAGCCCACAAAAAAAGAGGCCCAACACTAACTATAAGAACGAATCCAATCCAAAAGAATGTGACAAGTAATTACAAAAAGTCTAATTAATAAACTCACACAAAAAAGAAATAAATCTAGCTAACCCTCAAAACTCCTCTCAAGACCTCTCAACCTCTCTAATTATCCTACCGTTCATCTCAAGCTAAATTTCCCACAAATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGTGTGCGAAGAAGTTCAACAGTGCTTTACTTTATCTTGAAAAGGAGGGTTCAGGAGCACTTCCTTATCATAGAATAACAGATTGCGAGCCAACACAATCCCATAAGTCTTGAAAAATTGATTCCAAAGGAAGAGAGCAAACCGACAATCTTTCTGTTGTTTGATGTACTCTTCTCTCAATAGGGATTATGTTTTTTTCTACTTTTTGGAAGATTTATTCCAAAGAATATTAAGTTCTTTGTGTGACAAGTTATTCATAGACGAGTAAACACTCTTGCTTTAATCACTATAAATTCTGTTGGAACTAATAATTATCAACAATTGAAAAGTGTTCCTTTTGTAATATCCCTTTAGCCGTGGTTTGAGAAATATTAGAACTATGGACATTGTTGTTTCGATATTTCTTTAGATGATATGACATACACTAACCCTCACTAACTTATGTCTCAGTGAAAAATCTTCATCAGAGACGGAATCAAGACATGGGAAATCCGATGGTGGACAAGTTTTGTACCGTGAGTATATGCCTTCTGCATGGCAGGTAATCTATGAAATTGTCCCTGCCTATATTTACTTTTATGAAAGCCATAACTTACGTAGTTAGAAGTGTTGTCAGATTTTAAAGATAACAAGTCTCTCGATCACGTTAACCAGACTTGAGGTATTGCCTGAATAAAAAAGAAAACAAACATAAATTTAAGGCAAAAAAACTAGAAATAAAATTGTTATCAAACAGTGTCTAAATCATATAAGAAGAGATAAGACATCCAAAGCCACTGTTGTTACCATCACCTTCCTCTGAATTTAATGCATCATTCACTGATTTTCTGGAGACATTGTCCTCGCGGTGTACCTAAGGCTCAATGTTTTCCTTTCCTTCTTCTTGGTGTTTTGGAATCGAGTATTATAAGTTTCGTTTGCTAACTATTTAGTTTTTAAAAATTAAGTGTATGAATAGTCTACCTAATGGTTTCTTTGTTTTATTATCTACTTCTAAAAGTCGTCTTCAAAATCTAAATCATGTTTTGAGAACTAAAAAAATGTAGTTATGTTTTTAGAATTTGGCTAAGAATTCTAGTATTTAGATAGAAAAGATGAAAACCAAAATCAAATCCAAATAGTTATTAAACGAAATTGTATCTATTTGTTTGGATTGAAAATTATATCAAGCATTAGTTTCTATTTGAAAATTTGATGATCGTTATCTTTTTTTTTTATTTTGTTGTTGGAATGTCTTCTCATAGTAAACCACAACTGTAAACACATTCTCATTTTTAAGCACTATCATTAGAATCTTTCTTAAATTATAAACAAATAATGGAAAACTAGTCATTTTGTATTTAAGTCATATTCCATTTTAGTCTAGTTCCAAAGTACTCCACCAGAATGATATTTTGATCATTCTAACCTTAGAAAGAGACTAATTTGTTTGTGTTTTGCAGTCTTTTGTAACGCACAGAGTTTTTGTTCGAGGCTCAGGTTTGATTACATATTATGCTCAAAAGTGGAATGATTTGGTCAACTTTCTATATTTTCAGTCATTTATCTGATAGCTTTTATTGCCTTGCAGACGAATATCTTACAGTGAGCAGTTGTGAGCATCAATCAATATATTTTTCTGAATGGCTTCTACCATCCCTGGGTGTCCTCGATAAATTTATTGTCAAAAATGTGAGAAACCAACCCATTTTCCATATATTATCACTAAACTCGTCAAGCTCCACACTCATCGATAGTAATTGATATGTATTATTTCTTTTAAAGTTAGAAGTTCAAATTCTCGTAGTACTAACTTTAACTTTAAATGGATAAGGGGTTAAATGTATTTCTTGTCTAAATAAACTTACATGAAAAAAATTTGTACCTGCAGGCTGGCATCTTTATGGTACCATGAACTGCATTTGTTTGATATGCCACTGACCAGTTCTTGGGCGTTCTTATGATTCCAGGTCAGCCTTTTGTTTTTATTTGAATAACGTTTGGATGTCCAAGTTTTGTATTATTATCATTGTAGTTGAAGTTTTTATTGTTCAACTATCTAAAAAGCGTCTACTTTATTATGATAGTTAACGTCTAGAAGTGGCGTTTTAAACTATGGTATGCTCGTCAACAAAGGTTAATGTTGATGTTTTCTACCTCAAATATCATACAAAAATGTAAATAATATTATTGTTGTCCTCACATATCGGTCAATATAAGGCATTATTGAGCTCGGTAGTCGTCTAACTTAAATATAATACTTGCACTTGCACTTTTTTCTCGTTTGCATAGCATGATTAATTATATAGCCCACAACTATGATTAAAAAAAAATTCAGTGATATATTTTTTTTGTTGACTGGTTTTCATTGTTTAGGGTTCAAGGTTTAGGGTTGCGCACAGCTGAGGACTTAATCGAATAAGGGAAAAGTGGTTTGGTTCGTGGTTGGTTGGATTGAGCTTCTCTTTCTTTCATTTTTTTCATTTTCAGTGTTTGAATAAATAGGTTCAGGAGAATGAATCTTTCATCTTTCTCTTTTTCTTTCACCGAGTGAAAAAATAAAGAGGAGAAAGAACCAAATAGTTTAGAGCCGAAGGAGAGAAGCAGTGAGACCAAAACTTTCAAACATCCATAGTACACTCGTTACACTATACTGAACAAGCCAACCTTACAAAAGATATTTATTATTTATTTCTGATTTTTCTTCGGTCATCAAATGTTGTAACTCTAATATGTTGATTTAGATTCTACAAATCAAAATGAATGAGAATAATAAAGACGTTGG

mRNA sequence

GCAGAGTTCCGGCCAAATAAGGGCGTTGCAATGGCGCTCCGCCAGTGGATCGACGGCGATGAGAGCGCCGCTGAGATGCTTACTAGAGTCCTCAAAGAGCGAACCTCCTTGCTTGTTCCGCCTCTCCACAGAGTTCCTCTCCACGTCGGCAATGTGGTCGAGCTTGTTGGACCCTCTGGTTCAGCCAAGACGCAGATCTTAATCCAGGCTGCAGTTAATTGCATTCTTCCCAAGGAGTGGAATGGGATCCGCTATGGAGGCTTGGAGTGTTCAGTGGTGTTCATTGACTTGGATTGTCGTCTTGACATCTCAAGGCTTTCCCAAGTTTTGAAGCTTCGAATTTTGGAAGGAAATGGCAACGGAGATTGGGGAAATTTTGATGCACTATATACTACATGCCTGAGAAGATTCTTTTACATCCGTTGCTATGACAGTTTTGAATTTCTTGCCACTCTCAAGACCATGCACCATAAACTTCAAAAAGAAAGAGATGACCTTGGAATTGGGTTGCGTCTACTCATGATCGACAGTATTGGAGCTTATCATTGGGTTGATCGTGTCTCTTCATCCTTGCCTTTGTGGGGTTACAACAGGAAAGGCTTTTCTCTTGCAAATATGTTAGAAGCGGCAGTAGAAGAAATTAAAAAGCTTTTGCTGGTGCATCCGAGTATTGTTATTGCTTCAAAAGCTACCATTTTTGGGGATAGATCTTCTGACATAGTTAGACGTGAAAAATCTTCATCAGAGACGGAATCAAGACATGGGAAATCCGATGGTGGACAAGTTTTGTACCGTGAGTATATGCCTTCTGCATGGCAGTCTTTTGTAACGCACAGAGTTTTTGTTCGAGGCTCAGACGAATATCTTACAGTGAGCAGTTGTGAGCATCAATCAATATATTTTTCTGAATGGCTTCTACCATCCCTGGGTGTCCTCGATAAATTTATTGTCAAAAATGCTGGCATCTTTATGGTACCATGAACTGCATTTGTTTGATATGCCACTGACCAGTTCTTGGGCGTTCTTATGATTCCAGGGTTCAAGGTTTAGGGTTGCGCACAGCTGAGGACTTAATCGAATAAGGGAAAAGTGGTTTGGTTCGTGGTTGGTTGGATTGAGCTTCTCTTTCTTTCATTTTTTTCATTTTCAGTGTTTGAATAAATAGGTTCAGGAGAATGAATCTTTCATCTTTCTCTTTTTCTTTCACCGAGTGAAAAAATAAAGAGGAGAAAGAACCAAATAGTTTAGAGCCGAAGGAGAGAAGCAGTGAGACCAAAACTTTCAAACATCCATAGTACACTCGTTACACTATACTGAACAAGCCAACCTTACAAAAGATATTTATTATTTATTTCTGATTTTTCTTCGGTCATCAAATGTTGTAACTCTAATATGTTGATTTAGATTCTACAAATCAAAATGAATGAGAATAATAAAGACGTTGG

Coding sequence (CDS)

ATGGCGCTCCGCCAGTGGATCGACGGCGATGAGAGCGCCGCTGAGATGCTTACTAGAGTCCTCAAAGAGCGAACCTCCTTGCTTGTTCCGCCTCTCCACAGAGTTCCTCTCCACGTCGGCAATGTGGTCGAGCTTGTTGGACCCTCTGGTTCAGCCAAGACGCAGATCTTAATCCAGGCTGCAGTTAATTGCATTCTTCCCAAGGAGTGGAATGGGATCCGCTATGGAGGCTTGGAGTGTTCAGTGGTGTTCATTGACTTGGATTGTCGTCTTGACATCTCAAGGCTTTCCCAAGTTTTGAAGCTTCGAATTTTGGAAGGAAATGGCAACGGAGATTGGGGAAATTTTGATGCACTATATACTACATGCCTGAGAAGATTCTTTTACATCCGTTGCTATGACAGTTTTGAATTTCTTGCCACTCTCAAGACCATGCACCATAAACTTCAAAAAGAAAGAGATGACCTTGGAATTGGGTTGCGTCTACTCATGATCGACAGTATTGGAGCTTATCATTGGGTTGATCGTGTCTCTTCATCCTTGCCTTTGTGGGGTTACAACAGGAAAGGCTTTTCTCTTGCAAATATGTTAGAAGCGGCAGTAGAAGAAATTAAAAAGCTTTTGCTGGTGCATCCGAGTATTGTTATTGCTTCAAAAGCTACCATTTTTGGGGATAGATCTTCTGACATAGTTAGACGTGAAAAATCTTCATCAGAGACGGAATCAAGACATGGGAAATCCGATGGTGGACAAGTTTTGTACCGTGAGTATATGCCTTCTGCATGGCAGTCTTTTGTAACGCACAGAGTTTTTGTTCGAGGCTCAGACGAATATCTTACAGTGAGCAGTTGTGAGCATCAATCAATATATTTTTCTGAATGGCTTCTACCATCCCTGGGTGTCCTCGATAAATTTATTGTCAAAAATGCTGGCATCTTTATGGTACCATGA

Protein sequence

MALRQWIDGDESAAEMLTRVLKERTSLLVPPLHRVPLHVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILEGNGNGDWGNFDALYTTCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGIGLRLLMIDSIGAYHWVDRVSSSLPLWGYNRKGFSLANMLEAAVEEIKKLLLVHPSIVIASKATIFGDRSSDIVRREKSSSETESRHGKSDGGQVLYREYMPSAWQSFVTHRVFVRGSDEYLTVSSCEHQSIYFSEWLLPSLGVLDKFIVKNAGIFMVP

Homology

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BLAST of CmaCh04G018730 vs. Swiss-Prot
Match: XRCC2_ARATH (DNA repair protein XRCC2 homolog OS=Arabidopsis thaliana GN=XRCC2 PE=2 SV=2)

HSP 1 Score: 320.5 bits (820), Expect = 2.1e-86
Identity = 163/328 (49.70%), Postives = 228/328 (69.51%), Query Frame = 1


Query: 4   RQWIDGDESAAEMLTRVLKERTSLLVPPLHRVPLHVGNVVELVGPSGSAKTQILIQAAVN 63
           R WI GDE+A +ML+RVLK+R  LL+PPLHRVPL  GNVVE+ G S SAKTQILIQAA++
Sbjct: 7   RSWIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRAGNVVEITGASTSAKTQILIQAAIS 66

Query: 64  CILPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILEGN--GNGDWGNF----- 123
           CILPK WNGI YGGL   V+F+DLDCR D+ RLSQ+LK R+L+ N  GNG W        
Sbjct: 67  CILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANWLGNGAWWQLEESNV 126

Query: 124 ---------------DALYTTCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGIGLR 183
                          + LY +C++RF Y+RCYDS E L++LKT+H+++Q +++  G  + 
Sbjct: 127 KSCKSAEEKTKTVFDEELYASCMKRFLYVRCYDSLELLSSLKTLHYRIQ-QQEACGSQVG 186

Query: 184 LLMIDSIGAYHWVDRVSSSLPLWGYNRKGFSLANMLEAAVEEIKKLLLVHPSIVIASKAT 243
           +LMIDSIGA+HW DR+SSSL L  +NRK  SL N++E  V+E+KKLLLVH  +V+A+K T
Sbjct: 187 VLMIDSIGAFHWTDRLSSSLALETHNRKSLSLTNVVETIVQELKKLLLVHSLVVLATKGT 246

Query: 244 IFGDR-SSDIVRREKSSSETESRHGKSDGGQVLYREYMPSAWQSFVTHRVFVRGSDEYLT 303
           I+ ++  ++   R+ SS++  S +  S   Q  +RE+MPS+WQ+FVTH++ +R S +Y +
Sbjct: 247 IYEEKYPANENNRKVSSNDHFSGNVASKAQQPPFREFMPSSWQAFVTHKIIIRKSADYQS 306

Query: 304 VSSCEHQSIYFS-EWLLPSLGVLDKFIV 308
           + + +   + +S EWL P L  +D+FIV
Sbjct: 307 LQTGQQNLLAYSLEWLQPQLSRIDRFIV 333

[Close]

BLAST of CmaCh04G018730 vs. Swiss-Prot
Match: XRCC2_HUMAN (DNA repair protein XRCC2 OS=Homo sapiens GN=XRCC2 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.8e-22
Identity = 83/285 (29.12%), Postives = 132/285 (46.32%), Query Frame = 1


Query: 11  ESAAEMLTRVLKERTSL--LVPPLHR---VPLHVGNVVELVGPSGSAKTQILIQAAVNCI 70
           ES  E+L R L+ R+SL  + P L      P+H G+++E  GP G+ KT++L      CI
Sbjct: 9   ESGTELLAR-LEGRSSLKEIEPNLFADEDSPVH-GDILEFHGPEGTGKTEMLYHLTARCI 68

Query: 71  LPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILEGNGNGDWGNFDALYTTCLR 130
           LPK       GGLE  V+FID D   D+ RL  +L+ R+ + +        + +   CL 
Sbjct: 69  LPKS-----EGGLEVEVLFIDTDYHFDMLRLVTILEHRLSQSS--------EEIIKYCLG 128

Query: 131 RFFYIRCYDSFEFLATLKTMHHKLQKERDDLGIGLRLLMIDSIGAYHWVDRVSSSLPLWG 190
           RFF + C  S   L TL ++              L LL++DS+ A++W+DRV+       
Sbjct: 129 RFFLVYCSSSTHLLLTLYSLESMFCSHP-----SLCLLILDSLSAFYWIDRVN------- 188

Query: 191 YNRKGFSLANMLEAAVEEIKKLLLVHPSIVIASKATIFGDRSSDIVRREKSSSETESRHG 250
               G    N+ E+ + +  + L     +V   +  +F    + + +   SS E      
Sbjct: 189 ----GGESVNLQESTLRKCSQCL---EKLVNDYRLVLFATTQTIMQKASSSSEEPSHASR 248

Query: 251 KSDGGQVLYREYMPSAWQSFVTHRVFV------RGSDEYLTVSSC 285
           +     + YR Y+  AWQ  V HR+F       + S+++  VS C
Sbjct: 249 RLCDVDIDYRPYLCKAWQQLVKHRMFFSKQDDSQSSNQFSLVSRC 259

[Close]

BLAST of CmaCh04G018730 vs. Swiss-Prot
Match: XRCC2_MOUSE (DNA repair protein XRCC2 OS=Mus musculus GN=Xrcc2 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.1e-21
Identity = 85/272 (31.25%), Postives = 130/272 (47.79%), Query Frame = 1


Query: 11  ESAAEMLTRVLKERTSL--LVPPLHR---VPLHVGNVVELVGPSGSAKTQILIQAAVNCI 70
           ES  E+L R L+ R+SL  L P L      P+H G++ E  GP G+ KT++L      CI
Sbjct: 9   ESGTELLAR-LEGRSSLKELEPNLFADEDSPVH-GDIFEFHGPEGTGKTEMLYHLTARCI 68

Query: 71  LPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILEGNGNGDWGNFDALYTTCLR 130
           LPK       GGL+  V+FID D   D+ RL  VL+ R+ + +        +     CL 
Sbjct: 69  LPKS-----EGGLQIEVLFIDTDYHFDMLRLVTVLEHRLSQSS--------EEAMKLCLA 128

Query: 131 RFFYIRCYDSFEFLATLKTMHHKLQKERDDLGIGLRLLMIDSIGAYHWVDRVSSSLPLWG 190
           R F   C  S + L TL ++   L          L LL++DS+ +++W+DRVS       
Sbjct: 129 RLFLAYCSSSMQLLLTLHSLEALLCSRP-----SLCLLIVDSLSSFYWIDRVSG------ 188

Query: 191 YNRKGFSLANMLEAAVEEIKKLLLVHPSIVIASKATIFGDRSSDIVRREKSSSETESRHG 250
               G S+A + E+ +++  +LL     +V   +  +F    S ++++   S++  S   
Sbjct: 189 ----GESVA-LQESTLQKCSQLL---ERLVTEYRLLLFATTQS-LMQKGSDSADGPSSSK 245

Query: 251 KSDGGQVLYREYMPSAWQSFVTHRVFVRGSDE 278
               G + YR Y+  AWQ  V HRV     DE
Sbjct: 249 HPCDGDMGYRAYLCKAWQRVVKHRVIFSRDDE 245

[Close]

BLAST of CmaCh04G018730 vs. Swiss-Prot
Match: RADA_ARCFU (DNA repair and recombination protein RadA OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=radA PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.7e-06
Identity = 49/192 (25.52%), Postives = 86/192 (44.79%), Query Frame = 1


Query: 42  VVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLK 101
           + E  G  GS KTQI  Q AVN  LP++      GGLE SV+ ID +      R+ Q+ +
Sbjct: 110 ITEFFGEFGSGKTQICHQLAVNVQLPED-----EGGLEGSVIIIDTENTFRPERIIQMAE 169

Query: 102 LRILEGNGNGDWGNFDALYTTCLRRFFYIRCYDS---FEFLATLKTMHHKLQKERDDLGI 161
            + L+GN               L+  +  + Y+S      +   K +  KL+KE    G 
Sbjct: 170 AKGLDGN-------------EVLKNIYVAQAYNSNHQMLLVDNAKELAEKLKKE----GR 229

Query: 162 GLRLLMIDSIGAYHWVDRVSSSLPLWGYNRKGFSLANMLEAAVEEIKKLLLVHPSIVIAS 221
            +RL+++DS+ ++   + V          +    L ++++    E+    +V  + V+A 
Sbjct: 230 PVRLIIVDSLMSHFRAEYVGRGTLADRQQKLNRHLHDLMKFG--ELYNAAIVVTNQVMAR 277

Query: 222 KATIFGDRSSDI 231
              +FGD +  +
Sbjct: 290 PDVLFGDPTKPV 277

[Close]

BLAST of CmaCh04G018730 vs. TrEMBL
Match: A0A0A0KMH0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G289900 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 9.3e-150
Identity = 265/321 (82.55%), Postives = 285/321 (88.79%), Query Frame = 1


Query: 1   MALRQWIDGDESAAEMLTRVLKERTSLLVPPLHRVPLHVGNVVELVGPSGSAKTQILIQA 60
           MAL QWIDGDESA+EML RVLKERTSL+VPPLHRVPL VGNVVELVGPSGSAKTQILIQA
Sbjct: 1   MALGQWIDGDESASEMLGRVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQA 60

Query: 61  AVNCILPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILEGNGNG-----DWGN 120
           AVNCILPKEW+GI YGGL C  VFIDLDCRLDI+RL QVLKLRI+E   NG     D  N
Sbjct: 61  AVNCILPKEWSGIHYGGLGCPAVFIDLDCRLDITRLLQVLKLRIVEATSNGSLSTGDGEN 120

Query: 121 FDALYTTCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGIGLRLLMIDSIGAYHWVD 180
           FDALY TCLRRF YIRCYDSFEFLATLKTMHHKLQKERD LG+GL LL+IDSIGAYHWVD
Sbjct: 121 FDALYATCLRRFSYIRCYDSFEFLATLKTMHHKLQKERDSLGVGLHLLVIDSIGAYHWVD 180

Query: 181 RVSSSLPLWGYNRKGFSLANMLEAAVEEIKKLLLVHPSIVIASKATIFGDRSSDIVRREK 240
           R+SSSLPLWG+NRKGFSLAN+LEAAVEE++KLLLVHPSIVIASKATIFGDRSSD V+R+K
Sbjct: 181 RISSSLPLWGHNRKGFSLANVLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDAVKRDK 240

Query: 241 SSSETESRHGKSDGGQVLYREYMPSAWQSFVTHRVFVRGSDEYLTVSSCEHQSIYFSEWL 300
           + SE+E +HGK DGG  LYREYMPSAWQSFVTHRVFVR SDE+L +SSCEHQ  Y SEWL
Sbjct: 241 TLSESELKHGKPDGGLGLYREYMPSAWQSFVTHRVFVRNSDEHLKLSSCEHQPTYSSEWL 300

Query: 301 LPSLGVLDKFIVKNAGIFMVP 317
           LPSLG LDKFIV NAG+F VP
Sbjct: 301 LPSLGFLDKFIVTNAGVFSVP 321

[Close]

BLAST of CmaCh04G018730 vs. TrEMBL
Match: M5XPA7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa014924mg PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.5e-99
Identity = 186/311 (59.81%), Postives = 233/311 (74.92%), Query Frame = 1


Query: 1   MALRQWIDGDESAAEMLTRVLKERTSLLVPPLHRVPLHVGNVVELVGPSGSAKTQILIQA 60
           MA + WIDGDESAA+ML RV  ER  LL+PPLHRVPL VGNVVELVGPS SAKT ILIQA
Sbjct: 1   MAAKGWIDGDESAAKMLGRVATERPFLLLPPLHRVPLRVGNVVELVGPSASAKTHILIQA 60

Query: 61  AVNCILPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILEGNGNGDWGNFDALY 120
           AVNCILPKEWNG+ YGGLE  V+FIDLDCR DI RLS++LK +I E NG+  +   + LY
Sbjct: 61  AVNCILPKEWNGVHYGGLERLVMFIDLDCRFDILRLSEILKHQITEPNGSMYYD--EELY 120

Query: 121 TTCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGIGLRLLMIDSIGAYHWVDRVSSS 180
             C+RRF Y+RCYDS EFLATLKT+H++LQKE++   +G++LLMIDSIG +HWVDR S+ 
Sbjct: 121 ALCMRRFLYVRCYDSLEFLATLKTLHYRLQKEKEVHHVGIQLLMIDSIGPFHWVDRGSTF 180

Query: 181 LPLWGYNRKGFSLANMLEAAVEEIKKLLLVHPSIVIASKATIFGDR-SSDIVRREKSSSE 240
            PL G  RK  SL ++ +A V++IKKLLLVHP +V+A+K  I G+    D V++ KS  +
Sbjct: 181 FPLGGNKRKCLSLQSVFDAVVQDIKKLLLVHPMLVMATKEIILGNAYGGDEVKQNKSLLD 240

Query: 241 TES-RHGKSDGGQVLYREYMPSAWQSFVTHRVFVRGSDEYLTVSSCEHQSIYFSEWLLPS 300
               R+  S+  Q+ YREYMPS WQSFVTH++ VR SD+++ +   E  S+Y SEWLLPS
Sbjct: 241 ASGLRNLASNTQQLPYREYMPSVWQSFVTHKILVRASDDHMPIRHYEEHSVYLSEWLLPS 300

Query: 301 LGVLDKFIVKN 310
           +   DKF VK+
Sbjct: 301 ISFRDKFTVKD 309

[Close]

BLAST of CmaCh04G018730 vs. TrEMBL
Match: A0A059AAZ1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00844 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 6.8e-92
Identity = 175/319 (54.86%), Postives = 228/319 (71.47%), Query Frame = 1


Query: 2   ALRQWIDGDESAAEMLTRVLKERTSLLVP-PLHRVPLHVGNVVELVGPSGSAKTQILIQA 61
           A + WI+GDESA +ML R    R SL +P PLHR+PL  GNVVE+ GPS SAKTQ+LIQ 
Sbjct: 9   ATKSWINGDESARQMLGRAQASRPSLSLPAPLHRIPLRAGNVVEIAGPSPSAKTQLLIQT 68

Query: 62  AVNCILPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILEGNGNGDWGNFDALY 121
           AV+CILPKE NG+ YGGL  SV+F+DLDCR D+ RL ++L+ RI++ NG     + + + 
Sbjct: 69  AVSCILPKERNGVHYGGLGHSVLFVDLDCRFDVLRLVEMLRHRIVQVNGCSCTADDEEIL 128

Query: 122 TTCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGIGLRLLMIDSIGAYHWVDRVSSS 181
              +R+F YIRCYDS E LA LKT+HH+L+KE++  GIG  LLMIDSIGA+HWVDR S+S
Sbjct: 129 KLSMRQFSYIRCYDSCELLAALKTLHHRLEKEKESNGIGGHLLMIDSIGAFHWVDRASTS 188

Query: 182 LPLWGYNRKGFSLANMLEAAVEEIKKLLLVHPSIVIASKATIFGDRSSDIVRREK--SSS 241
           LPL G NRK  SL N+LE  VE+++KL+  HP +VI +KATI G   +D  R  K   S+
Sbjct: 189 LPLGGKNRKYLSLQNVLEVVVEDLRKLMSAHPMLVIVTKATIVGTTGNDFRRNYKRWPSA 248

Query: 242 ETESRHGKSDG-GQVLYREYMPSAWQSFVTHRVFVRGSDEYLTV-SSCEHQSIYFSEWLL 301
            T     + +G  +  +REYMP  WQSFVTHR+ VRGSD+++ +  S E+ + Y SEWLL
Sbjct: 249 GTFDASSELEGLREPYFREYMPPIWQSFVTHRILVRGSDDHIAMPKSQENNTAYVSEWLL 308

Query: 302 PSLGVLDKFIVKNAGIFMV 316
           P L  LDKF+V+NAG+F+V
Sbjct: 309 PRLNFLDKFVVRNAGVFLV 327

[Close]

BLAST of CmaCh04G018730 vs. TrEMBL
Match: A0A0D2VD57_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G099200 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 4.9e-90
Identity = 178/335 (53.13%), Postives = 227/335 (67.76%), Query Frame = 1


Query: 4   RQWIDGDESAAEMLTRVLKERTSLLVPPLHRVPLHVGNVVELVGPSGSAKTQILIQAAVN 63
           + W+  DESA EML RVL ER  LL+PPLHRVPL VGNVVELVGPS S+KT ILIQAA+ 
Sbjct: 6   KAWLVEDESAREMLDRVLTERPFLLLPPLHRVPLRVGNVVELVGPSSSSKTHILIQAAIT 65

Query: 64  CILPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILEGNGNGDWGNF------- 123
           CILPK W G+ YGGL  S +FIDLDCR D+ R S++L  RI+E   NG            
Sbjct: 66  CILPKLWKGVSYGGLGHSAMFIDLDCRFDVLRFSELLNHRIMEA-ANGSSSKVGCHEKDS 125

Query: 124 -----------DALYTTCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGIGLRLLMI 183
                      + L+  C++RF YIRCYDS EFLATLKT+H++LQKER+  G+ + LL+I
Sbjct: 126 EAQFARMKPYNEELFALCMKRFLYIRCYDSSEFLATLKTLHYRLQKEREVHGVNVHLLLI 185

Query: 184 DSIGAYHWVDRVSSSLPLWGYNRKGFSLANMLEAAVEEIKKLLLVHPSIVIASKATIFGD 243
           DSIGA+HWVDR SSS PL   NRK + L N+ EA V+EI++LLLVHP +V+A+KA + G+
Sbjct: 186 DSIGAFHWVDRGSSSFPLECDNRKSWHLQNVSEAVVQEIRRLLLVHPMLVMATKAVVLGN 245

Query: 244 RSSD-----IVRREKSSSETESRHGKSDGGQVLYREYMPSAWQSFVTHRVFVRGSDEYLT 303
           + S        R+  +     SR+  SD  Q+ YREYMP+AWQSFVTHR+ VR +D+ L 
Sbjct: 246 KYSTNELTWNYRKWSAVDNPYSRNITSD-QQLPYREYMPAAWQSFVTHRILVRATDDDLV 305

Query: 304 VSSCEHQSIYFSEWLLPSLGVLDKFIVKNAGIFMV 316
               ++ SIY  EWLLP L  LDKF V++ G+F++
Sbjct: 306 NGEHQNNSIYLLEWLLPPLNSLDKFTVRDTGVFIL 338

[Close]

BLAST of CmaCh04G018730 vs. TrEMBL
Match: A0A0K9QTC3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_143750 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 4.1e-89
Identity = 178/329 (54.10%), Postives = 226/329 (68.69%), Query Frame = 1


Query: 1   MALRQWIDGDESAAEMLTRVLKERTSLLVPPLHRVPLHVGNVVELVGPSGSAKTQILIQA 60
           M +R+W+  DE+A   L+RV   R  LL+PPLHR+PL  GNVVE+VGPS S KT IL+Q 
Sbjct: 1   MEIREWLTTDETAETYLSRVSTTRLPLLLPPLHRLPLRPGNVVEIVGPSPSGKTHILLQV 60

Query: 61  AVNCILPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILE----GNGNGDWGNF 120
           A+NCILPKEW G+ YGGLE SV+FIDLDCR DI RL Q+LKLRI       N  GD GN+
Sbjct: 61  AINCILPKEWKGVSYGGLEQSVMFIDLDCRFDILRLLQLLKLRIYSVCQVSNDLGDAGNW 120

Query: 121 ---DALYTTCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGIGLRLLMIDSIGAYHW 180
              + L   CL RF Y+RCYDS EFLATLKT+ ++LQ  R +    +  +MIDSIGAY+W
Sbjct: 121 TCDEELIHKCLERFLYVRCYDSLEFLATLKTLSYQLQ-TRKEFASKVYFMMIDSIGAYYW 180

Query: 181 VDRVSSSLPLWGYNRKGFSLANMLEAAVEEIKKLLLVHPSIVIASKATIFGDRS--SDIV 240
           VDR S+S+PL   NRK FSL ++ EA V EIKK L V P +V+A+KAT+F D+S  +DI 
Sbjct: 181 VDRASTSMPLGSNNRKIFSLQSVTEAVVREIKKFLRVQPMLVLATKATVFADKSVPNDIK 240

Query: 241 R--REKSSSETESRHG-KSDGGQVLYREYMPSAWQSFVTHRVFVRGSDEYLTVSSC-EHQ 300
           R  R+ SS +   +H  +S     L+REYMP AWQSFVTHR+ VR S +    S+C   +
Sbjct: 241 RPFRKWSSEDAAGQHTMESSPENALHREYMPLAWQSFVTHRISVRPSSQEYRASNCTTDE 300

Query: 301 SIYFSEWLLPSLGVLDKFIVKNAGIFMVP 317
            +Y  +WLLPSLG  DKF++++ GI  VP
Sbjct: 301 QVYLGQWLLPSLGFKDKFVIRDVGIIAVP 328

[Close]

BLAST of CmaCh04G018730 vs. TAIR10
Match: AT5G64520.1 (AT5G64520.1 homolog of X-ray repair cross complementing 2 (XRCC2))

HSP 1 Score: 320.5 bits (820), Expect = 1.2e-87
Identity = 163/328 (49.70%), Postives = 228/328 (69.51%), Query Frame = 1


Query: 4   RQWIDGDESAAEMLTRVLKERTSLLVPPLHRVPLHVGNVVELVGPSGSAKTQILIQAAVN 63
           R WI GDE+A +ML+RVLK+R  LL+PPLHRVPL  GNVVE+ G S SAKTQILIQAA++
Sbjct: 7   RSWIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRAGNVVEITGASTSAKTQILIQAAIS 66

Query: 64  CILPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILEGN--GNGDWGNF----- 123
           CILPK WNGI YGGL   V+F+DLDCR D+ RLSQ+LK R+L+ N  GNG W        
Sbjct: 67  CILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANWLGNGAWWQLEESNV 126

Query: 124 ---------------DALYTTCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGIGLR 183
                          + LY +C++RF Y+RCYDS E L++LKT+H+++Q +++  G  + 
Sbjct: 127 KSCKSAEEKTKTVFDEELYASCMKRFLYVRCYDSLELLSSLKTLHYRIQ-QQEACGSQVG 186

Query: 184 LLMIDSIGAYHWVDRVSSSLPLWGYNRKGFSLANMLEAAVEEIKKLLLVHPSIVIASKAT 243
           +LMIDSIGA+HW DR+SSSL L  +NRK  SL N++E  V+E+KKLLLVH  +V+A+K T
Sbjct: 187 VLMIDSIGAFHWTDRLSSSLALETHNRKSLSLTNVVETIVQELKKLLLVHSLVVLATKGT 246

Query: 244 IFGDR-SSDIVRREKSSSETESRHGKSDGGQVLYREYMPSAWQSFVTHRVFVRGSDEYLT 303
           I+ ++  ++   R+ SS++  S +  S   Q  +RE+MPS+WQ+FVTH++ +R S +Y +
Sbjct: 247 IYEEKYPANENNRKVSSNDHFSGNVASKAQQPPFREFMPSSWQAFVTHKIIIRKSADYQS 306

Query: 304 VSSCEHQSIYFS-EWLLPSLGVLDKFIV 308
           + + +   + +S EWL P L  +D+FIV
Sbjct: 307 LQTGQQNLLAYSLEWLQPQLSRIDRFIV 333

[Close]

BLAST of CmaCh04G018730 vs. NCBI nr
Match: gi|659113947|ref|XP_008456836.1| (PREDICTED: DNA repair protein XRCC2 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 540.0 bits (1390), Expect = 2.7e-150
Identity = 267/321 (83.18%), Postives = 285/321 (88.79%), Query Frame = 1


Query: 1   MALRQWIDGDESAAEMLTRVLKERTSLLVPPLHRVPLHVGNVVELVGPSGSAKTQILIQA 60
           M L QWIDGDESA+EML RVLKERTSL+VPPLHRVPL VGNVVELVGPSGSAKTQILIQA
Sbjct: 1   MELSQWIDGDESASEMLGRVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQA 60

Query: 61  AVNCILPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILEGNGNG-----DWGN 120
           AVNCILPKEWNGI YGGL CS VFIDLDCRLDI+RL QVLKLRILE   NG     D  N
Sbjct: 61  AVNCILPKEWNGIHYGGLGCSAVFIDLDCRLDITRLLQVLKLRILEAISNGSLNTGDGEN 120

Query: 121 FDALYTTCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGIGLRLLMIDSIGAYHWVD 180
           FDALY TCLRRFFYIRCYDSFEFLATLKTMHHKLQKERD LG+GL LL+IDSIGAYHWVD
Sbjct: 121 FDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDGLGVGLHLLVIDSIGAYHWVD 180

Query: 181 RVSSSLPLWGYNRKGFSLANMLEAAVEEIKKLLLVHPSIVIASKATIFGDRSSDIVRREK 240
           R+SSSLP WG+NRKGFSLAN+LEAAVEE++KLLLVHPSIVIAS+ATIFGDRSS++VRR+K
Sbjct: 181 RISSSLPPWGHNRKGFSLANVLEAAVEEVRKLLLVHPSIVIASRATIFGDRSSNVVRRDK 240

Query: 241 SSSETESRHGKSDGGQVLYREYMPSAWQSFVTHRVFVRGSDEYLTVSSCEHQSIYFSEWL 300
           S SE+E RHGK DGG  LYREYMPSAWQSFVTHRVFVR SDE+L  SSCEHQ  Y SEWL
Sbjct: 241 SLSESELRHGKPDGGLGLYREYMPSAWQSFVTHRVFVRDSDEHLAFSSCEHQPTYSSEWL 300

Query: 301 LPSLGVLDKFIVKNAGIFMVP 317
           LPSLG +DKFIV NAG+F VP
Sbjct: 301 LPSLGFVDKFIVTNAGVFSVP 321

[Close]

BLAST of CmaCh04G018730 vs. NCBI nr
Match: gi|778701936|ref|XP_011655113.1| (PREDICTED: DNA repair protein XRCC2 homolog isoform X2 [Cucumis sativus])

HSP 1 Score: 537.7 bits (1384), Expect = 1.3e-149
Identity = 265/321 (82.55%), Postives = 285/321 (88.79%), Query Frame = 1


Query: 1   MALRQWIDGDESAAEMLTRVLKERTSLLVPPLHRVPLHVGNVVELVGPSGSAKTQILIQA 60
           MAL QWIDGDESA+EML RVLKERTSL+VPPLHRVPL VGNVVELVGPSGSAKTQILIQA
Sbjct: 1   MALGQWIDGDESASEMLGRVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQA 60

Query: 61  AVNCILPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILEGNGNG-----DWGN 120
           AVNCILPKEW+GI YGGL C  VFIDLDCRLDI+RL QVLKLRI+E   NG     D  N
Sbjct: 61  AVNCILPKEWSGIHYGGLGCPAVFIDLDCRLDITRLLQVLKLRIVEATSNGSLSTGDGEN 120

Query: 121 FDALYTTCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGIGLRLLMIDSIGAYHWVD 180
           FDALY TCLRRF YIRCYDSFEFLATLKTMHHKLQKERD LG+GL LL+IDSIGAYHWVD
Sbjct: 121 FDALYATCLRRFSYIRCYDSFEFLATLKTMHHKLQKERDSLGVGLHLLVIDSIGAYHWVD 180

Query: 181 RVSSSLPLWGYNRKGFSLANMLEAAVEEIKKLLLVHPSIVIASKATIFGDRSSDIVRREK 240
           R+SSSLPLWG+NRKGFSLAN+LEAAVEE++KLLLVHPSIVIASKATIFGDRSSD V+R+K
Sbjct: 181 RISSSLPLWGHNRKGFSLANVLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDAVKRDK 240

Query: 241 SSSETESRHGKSDGGQVLYREYMPSAWQSFVTHRVFVRGSDEYLTVSSCEHQSIYFSEWL 300
           + SE+E +HGK DGG  LYREYMPSAWQSFVTHRVFVR SDE+L +SSCEHQ  Y SEWL
Sbjct: 241 TLSESELKHGKPDGGLGLYREYMPSAWQSFVTHRVFVRNSDEHLKLSSCEHQPTYSSEWL 300

Query: 301 LPSLGVLDKFIVKNAGIFMVP 317
           LPSLG LDKFIV NAG+F VP
Sbjct: 301 LPSLGFLDKFIVTNAGVFSVP 321

[Close]

BLAST of CmaCh04G018730 vs. NCBI nr
Match: gi|659113945|ref|XP_008456835.1| (PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 528.9 bits (1361), Expect = 6.2e-147
Identity = 262/314 (83.44%), Postives = 279/314 (88.85%), Query Frame = 1


Query: 1   MALRQWIDGDESAAEMLTRVLKERTSLLVPPLHRVPLHVGNVVELVGPSGSAKTQILIQA 60
           M L QWIDGDESA+EML RVLKERTSL+VPPLHRVPL VGNVVELVGPSGSAKTQILIQA
Sbjct: 1   MELSQWIDGDESASEMLGRVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQA 60

Query: 61  AVNCILPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILEGNGNG-----DWGN 120
           AVNCILPKEWNGI YGGL CS VFIDLDCRLDI+RL QVLKLRILE   NG     D  N
Sbjct: 61  AVNCILPKEWNGIHYGGLGCSAVFIDLDCRLDITRLLQVLKLRILEAISNGSLNTGDGEN 120

Query: 121 FDALYTTCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGIGLRLLMIDSIGAYHWVD 180
           FDALY TCLRRFFYIRCYDSFEFLATLKTMHHKLQKERD LG+GL LL+IDSIGAYHWVD
Sbjct: 121 FDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDGLGVGLHLLVIDSIGAYHWVD 180

Query: 181 RVSSSLPLWGYNRKGFSLANMLEAAVEEIKKLLLVHPSIVIASKATIFGDRSSDIVRREK 240
           R+SSSLP WG+NRKGFSLAN+LEAAVEE++KLLLVHPSIVIAS+ATIFGDRSS++VRR+K
Sbjct: 181 RISSSLPPWGHNRKGFSLANVLEAAVEEVRKLLLVHPSIVIASRATIFGDRSSNVVRRDK 240

Query: 241 SSSETESRHGKSDGGQVLYREYMPSAWQSFVTHRVFVRGSDEYLTVSSCEHQSIYFSEWL 300
           S SE+E RHGK DGG  LYREYMPSAWQSFVTHRVFVR SDE+L  SSCEHQ  Y SEWL
Sbjct: 241 SLSESELRHGKPDGGLGLYREYMPSAWQSFVTHRVFVRDSDEHLAFSSCEHQPTYSSEWL 300

Query: 301 LPSLGVLDKFIVKN 310
           LPSLG +DKFIV N
Sbjct: 301 LPSLGFVDKFIVTN 314

[Close]

BLAST of CmaCh04G018730 vs. NCBI nr
Match: gi|778701932|ref|XP_011655112.1| (PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 526.6 bits (1355), Expect = 3.1e-146
Identity = 260/314 (82.80%), Postives = 279/314 (88.85%), Query Frame = 1


Query: 1   MALRQWIDGDESAAEMLTRVLKERTSLLVPPLHRVPLHVGNVVELVGPSGSAKTQILIQA 60
           MAL QWIDGDESA+EML RVLKERTSL+VPPLHRVPL VGNVVELVGPSGSAKTQILIQA
Sbjct: 1   MALGQWIDGDESASEMLGRVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQA 60

Query: 61  AVNCILPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILEGNGNG-----DWGN 120
           AVNCILPKEW+GI YGGL C  VFIDLDCRLDI+RL QVLKLRI+E   NG     D  N
Sbjct: 61  AVNCILPKEWSGIHYGGLGCPAVFIDLDCRLDITRLLQVLKLRIVEATSNGSLSTGDGEN 120

Query: 121 FDALYTTCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGIGLRLLMIDSIGAYHWVD 180
           FDALY TCLRRF YIRCYDSFEFLATLKTMHHKLQKERD LG+GL LL+IDSIGAYHWVD
Sbjct: 121 FDALYATCLRRFSYIRCYDSFEFLATLKTMHHKLQKERDSLGVGLHLLVIDSIGAYHWVD 180

Query: 181 RVSSSLPLWGYNRKGFSLANMLEAAVEEIKKLLLVHPSIVIASKATIFGDRSSDIVRREK 240
           R+SSSLPLWG+NRKGFSLAN+LEAAVEE++KLLLVHPSIVIASKATIFGDRSSD V+R+K
Sbjct: 181 RISSSLPLWGHNRKGFSLANVLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDAVKRDK 240

Query: 241 SSSETESRHGKSDGGQVLYREYMPSAWQSFVTHRVFVRGSDEYLTVSSCEHQSIYFSEWL 300
           + SE+E +HGK DGG  LYREYMPSAWQSFVTHRVFVR SDE+L +SSCEHQ  Y SEWL
Sbjct: 241 TLSESELKHGKPDGGLGLYREYMPSAWQSFVTHRVFVRNSDEHLKLSSCEHQPTYSSEWL 300

Query: 301 LPSLGVLDKFIVKN 310
           LPSLG LDKFIV N
Sbjct: 301 LPSLGFLDKFIVTN 314

[Close]

BLAST of CmaCh04G018730 vs. NCBI nr
Match: gi|659113949|ref|XP_008456837.1| (PREDICTED: DNA repair protein XRCC2 homolog isoform X3 [Cucumis melo])

HSP 1 Score: 474.2 bits (1219), Expect = 1.8e-130
Identity = 244/314 (77.71%), Postives = 259/314 (82.48%), Query Frame = 1


Query: 1   MALRQWIDGDESAAEMLTRVLKERTSLLVPPLHRVPLHVGNVVELVGPSGSAKTQILIQA 60
           M L QWIDGDESA+EML RVLKERTSL+VPPLHRVPL VGNVVELVGPSGSAKTQILIQA
Sbjct: 1   MELSQWIDGDESASEMLGRVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQA 60

Query: 61  AVNCILPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILEGNGNG-----DWGN 120
           AVNCILPKEWNGI YGGL CS VFIDLDCRLDI+RL QVLKLRILE   NG     D  N
Sbjct: 61  AVNCILPKEWNGIHYGGLGCSAVFIDLDCRLDITRLLQVLKLRILEAISNGSLNTGDGEN 120

Query: 121 FDALYTTCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGIGLRLLMIDSIGAYHWVD 180
           FDALY TCLRRFFYIRCYDSFEFLATLKTMHHKLQKERD LG+GL LL+ID         
Sbjct: 121 FDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDGLGVGLHLLVID--------- 180

Query: 181 RVSSSLPLWGYNRKGFSLANMLEAAVEEIKKLLLVHPSIVIASKATIFGDRSSDIVRREK 240
                       RKGFSLAN+LEAAVEE++KLLLVHPSIVIAS+ATIFGDRSS++VRR+K
Sbjct: 181 ------------RKGFSLANVLEAAVEEVRKLLLVHPSIVIASRATIFGDRSSNVVRRDK 240

Query: 241 SSSETESRHGKSDGGQVLYREYMPSAWQSFVTHRVFVRGSDEYLTVSSCEHQSIYFSEWL 300
           S SE+E RHGK DGG  LYREYMPSAWQSFVTHRVFVR SDE+L  SSCEHQ  Y SEWL
Sbjct: 241 SLSESELRHGKPDGGLGLYREYMPSAWQSFVTHRVFVRDSDEHLAFSSCEHQPTYSSEWL 293

Query: 301 LPSLGVLDKFIVKN 310
           LPSLG +DKFIV N
Sbjct: 301 LPSLGFVDKFIVTN 293

The following BLAST results are available for this feature:

BLAST of CmaCh04G018730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
XRCC2_ARATH	2.1e-86	49.70	DNA repair protein XRCC2 homolog OS=Arabidopsis thaliana GN=XRCC2 PE=2 SV=2	[more]
XRCC2_HUMAN	4.8e-22	29.12	DNA repair protein XRCC2 OS=Homo sapiens GN=XRCC2 PE=1 SV=1	[more]
XRCC2_MOUSE	3.1e-21	31.25	DNA repair protein XRCC2 OS=Mus musculus GN=Xrcc2 PE=2 SV=1	[more]
RADA_ARCFU	3.7e-06	25.52	DNA repair and recombination protein RadA OS=Archaeoglobus fulgidus (strain ATCC...	[more]

BLAST of CmaCh04G018730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMH0_CUCSA	9.3e-150	82.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G289900 PE=4 SV=1	[more]
M5XPA7_PRUPE	1.5e-99	59.81	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa014924mg PE=4 S...	[more]
A0A059AAZ1_EUCGR	6.8e-92	54.86	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00844 PE=4 SV=1	[more]
A0A0D2VD57_GOSRA	4.9e-90	53.13	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G099200 PE=4 SV=1	[more]
A0A0K9QTC3_SPIOL	4.1e-89	54.10	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_143750 PE=4 SV=1	[more]

BLAST of CmaCh04G018730 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64520.1	1.2e-87	49.70	homolog of X-ray repair cross complementing 2 (XRCC2)	[more]

BLAST of CmaCh04G018730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659113947\|ref\|XP_008456836.1\|	2.7e-150	83.18	PREDICTED: DNA repair protein XRCC2 homolog isoform X2 [Cucumis melo]	[more]
gi\|778701936\|ref\|XP_011655113.1\|	1.3e-149	82.55	PREDICTED: DNA repair protein XRCC2 homolog isoform X2 [Cucumis sativus]	[more]
gi\|659113945\|ref\|XP_008456835.1\|	6.2e-147	83.44	PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Cucumis melo]	[more]
gi\|778701932\|ref\|XP_011655112.1\|	3.1e-146	82.80	PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Cucumis sativus]	[more]
gi\|659113949\|ref\|XP_008456837.1\|	1.8e-130	77.71	PREDICTED: DNA repair protein XRCC2 homolog isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013632	DNA_recomb/repair_Rad51_C
IPR020588	RecA_ATP-bd
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0005524	ATP binding
GO:0008094	DNA-dependent ATPase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006281	DNA repair

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006412	translation
cellular_component	GO:0033063	Rad51B-Rad51C-Rad51D-XRCC2 complex
cellular_component	GO:0005657	replication fork
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008094	DNA-dependent ATPase activity
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G018730.1	CmaCh04G018730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013632	DNA recombination and repair protein Rad51, C-terminal	PFAM	PF08423	Rad51	coord: 38..175 score: 4.
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROFILE	PS50162	RECA_2	coord: 17..222 score: 23
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 38..276 score: 5.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 37..176 score: 6.29
None	No IPR available	PANTHER	PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	coord: 254..299 score: 8.4E-93coord: 1..236 score: 8.4
None	No IPR available	PANTHER	PTHR22942:SF36	DNA REPAIR PROTEIN XRCC2 HOMOLOG	coord: 1..236 score: 8.4E-93coord: 254..299 score: 8.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G018730	Cla016886	Watermelon (97103) v1	cmawmB732
CmaCh04G018730	ClCG11G001140	Watermelon (Charleston Gray)	cmawcgB633
CmaCh04G018730	CSPI05G12560	Wild cucumber (PI 183967)	cmacpiB749
CmaCh04G018730	CmoCh04G019720	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G018730	Cp4.1LG01g16600	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G018730	CsaV3_5G013190	Cucumber (Chinese Long) v3	cmacucB0900
CmaCh04G018730	Cla97C11G207550	Watermelon (97103) v2	cmawmbB739
CmaCh04G018730	Bhi07G000125	Wax gourd	cmawgoB0904
CmaCh04G018730	CsGy5G009950	Cucumber (Gy14) v2	cgybcmaB687
CmaCh04G018730	Carg25932	Silver-seed gourd	carcmaB0495

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G018730	Cucumber (Gy14) v1	cgycmaB0545
CmaCh04G018730	Wild cucumber (PI 183967)	cmacpiB766
CmaCh04G018730	Cucumber (Chinese Long) v2	cmacuB759
CmaCh04G018730	Melon (DHL92) v3.5.1	cmameB646
CmaCh04G018730	Bottle gourd (USVL1VR-Ls)	cmalsiB670
CmaCh04G018730	Cucumber (Gy14) v2	cgybcmaB675
CmaCh04G018730	Melon (DHL92) v3.6.1	cmamedB727
CmaCh04G018730	Melon (DHL92) v3.6.1	cmamedB730
CmaCh04G018730	Cucumber (Chinese Long) v3	cmacucB0898
CmaCh04G018730	Watermelon (97103) v2	cmawmbB726
CmaCh04G018730	Watermelon (97103) v2	cmawmbB735