CmaCh04G014240 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATAATTTGAAGCCATCGGCTTCATTTACGGAACCCTAACTGAACTCTCTCATTTTCCTTCTACTGATTCCGATTGGCTTCTACTAAGGATGAAAATCGTAGCTGCTTATTTGCTCGCTGTTTTGGGAGGCAATGCCAGCCCTTCTGCTAAGGATTTGAAGGACATTCTCGGATCTGGTAAAATCCGCATCTCGCTCTTTCCCCGCTTGTTTATTTTATCGATTTATCATTTTAAAGATTTTTCAGGAATTTTTTGTTCGACGTTAGATTTATAGGATTGTTTTGTTAGTTAGGTTATTGTTCTTTGATTCGCTTCGTTTCAATTCTTATGTCAAGCTATGGAGTTTCGCTTTTGATGGTTTGCGGTAGCTATTGTTGTTTGTTCTCTCTTCTTTTGTGCTGTTCGGCTTCAAATTTTATTAAATGATTATCGTTTTTTTTTTTTTTGGAGTTAATACGTGTTTGATTACTGATTGTCTTCATTATTGTCGTGCTTGAACGTGCTTTCTTTTAATAATCAGTTCATGCTTGAGAAACAATAGGAAGAATGGCTGTTATCCGTGGCTGGATATGATTAGATTCTAATTATATGTAATTTGTATCTATCCTACATTTTCGCGATTGTCTAAGAGAATAGTGTAATTCTACTTCAGACTGATTCTTAGGTTTAATTTGATATCCTTTTAATTGTTGTTATTTGGAATGCTCAATTCGATGCTTTTTTTATGTTTTGAATCCACAATTCTTTTCATCTAATGCAATGTTATATGTATGAATTTCATTTATCGCATTTGCTTTGGATATTGAATTACATGAAAGATTTAATATTTCTGATGGTGTCATAATTCTCTTTCCGGAACCATTTTGCAGTTGGAGCGGAAGTTGATGAGGACAAAATCGAGCTTCTGATGTCTAGTGTTAAGGGTAAGGATATTACAGAGCTCATTGCATCCGGAAGAGAAAAGCTAGCATCTGTTCCTTCTGGTGGAGGTGCCGCTGTGGCAGTTGCCGCATCTGGAGGTGGCGGCGGTGCGGCTGCCCCTGCTGCTGCAGAGTCAAAGAAAGAAGAGAAGGTTGAAGAGAAGGAGGAATCAGACGATGTAAGTTTCTTAAATCTTTATGAAAATGTTGCTTGGAATTGCATGTTTAACATCGAAATTCTCTCATTATTATTAACCAATGGAAGCAATAATCTGACGAAAATAGATTCCCCACCTTATGAAACGTTAAATGTTTGCCTGGAAGGCCGAAAAACCTCACAGAACAAACATCTTTTCTTTAATTCACCATCTTTTTAGTTCATGTAATTTCTTCAAACTCCATGTTTACTATTTTGCAGGATATGGGCTTCAGTCTTTTCGATTAAGTATAATTACGAAGTCGAATGTTGTTCAGAGATTCTTCAAGATTTTAAGATTGGAATTTTTGTTTTTCACAATGTAGTCTTTTTCCAACATTATCCCCGTGTTATGATGAGCCGAATGTCAAATTTCTTTTCAGTTTATAAATTTAGTCTTAATTTTTTGGATGCTTTAAAACAAACGCCTTTGCTATTATATCGAAAACAAGGAATTGCTGCTGCTATGGCATGATTCCGAAAAATTGGAGGCCGTTGTGAATTTTCTGTTGCAGTTCCCTCTCCAACA TATAATTTGAAGCCATCGGCTTCATTTACGGAACCCTAACTGAACTCTCTCATTTTCCTTCTACTGATTCCGATTGGCTTCTACTAAGGATGAAAATCGTAGCTGCTTATTTGCTCGCTGTTTTGGGAGGCAATGCCAGCCCTTCTGCTAAGGATTTGAAGGACATTCTCGGATCTGTTGGAGCGGAAGTTGATGAGGACAAAATCGAGCTTCTGATGTCTAGTGTTAAGGGTAAGGATATTACAGAGCTCATTGCATCCGGAAGAGAAAAGCTAGCATCTGTTCCTTCTGGTGGAGGTGCCGCTGTGGCAGTTGCCGCATCTGGAGGTGGCGGCGGTGCGGCTGCCCCTGCTGCTGCAGAGTCAAAGAAAGAAGAGAAGGTTGAAGAGAAGGAGGAATCAGACGATGATATGGGCTTCAGTCTTTTCGATTAAGTATAATTACGAAGTCGAATGTTGTTCAGAGATTCTTCAAGATTTTAAGATTGGAATTTTTGTTTTTCACAATGTAGTCTTTTTCCAACATTATCCCCGTGTTATGATGAGCCGAATGTCAAATTTCTTTTCAGTTTATAAATTTAGTCTTAATTTTTTGGATGCTTTAAAACAAACGCCTTTGCTATTATATCGAAAACAAGGAATTGCTGCTGCTATGGCATGATTCCGAAAAATTGGAGGCCGTTGTGAATTTTCTGTTGCAGTTCCCTCTCCAACA ATGAAAATCGTAGCTGCTTATTTGCTCGCTGTTTTGGGAGGCAATGCCAGCCCTTCTGCTAAGGATTTGAAGGACATTCTCGGATCTGTTGGAGCGGAAGTTGATGAGGACAAAATCGAGCTTCTGATGTCTAGTGTTAAGGGTAAGGATATTACAGAGCTCATTGCATCCGGAAGAGAAAAGCTAGCATCTGTTCCTTCTGGTGGAGGTGCCGCTGTGGCAGTTGCCGCATCTGGAGGTGGCGGCGGTGCGGCTGCCCCTGCTGCTGCAGAGTCAAAGAAAGAAGAGAAGGTTGAAGAGAAGGAGGAATCAGACGATGATATGGGCTTCAGTCTTTTCGATTAA MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAASGGGGGAAAPAAAESKKEEKVEEKEESDDDMGFSLFD
BLAST of CmaCh04G014240 vs. Swiss-Prot
Match: RLA21_ARATH (60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana GN=RPP2A PE=2 SV=2) HSP 1 Score: 147.9 bits (372), Expect = 6.7e-35 Identity = 87/116 (75.00%), Postives = 99/116 (85.34%), Query Frame = 1
BLAST of CmaCh04G014240 vs. Swiss-Prot
Match: RLA24_ARATH (60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana GN=RPP2D PE=2 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.0e-34 Identity = 84/114 (73.68%), Postives = 96/114 (84.21%), Query Frame = 1
BLAST of CmaCh04G014240 vs. Swiss-Prot
Match: RLA22_ARATH (60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana GN=RPP2B PE=1 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 3.3e-34 Identity = 84/115 (73.04%), Postives = 97/115 (84.35%), Query Frame = 1
BLAST of CmaCh04G014240 vs. Swiss-Prot
Match: RLA2_PARAR (60S acidic ribosomal protein P2 OS=Parthenium argentatum PE=3 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 3.3e-34 Identity = 84/114 (73.68%), Postives = 97/114 (85.09%), Query Frame = 1
BLAST of CmaCh04G014240 vs. Swiss-Prot
Match: RLA2A_MAIZE (60S acidic ribosomal protein P2A OS=Zea mays GN=RPP2A PE=1 SV=3) HSP 1 Score: 141.0 bits (354), Expect = 8.2e-33 Identity = 87/114 (76.32%), Postives = 94/114 (82.46%), Query Frame = 1
BLAST of CmaCh04G014240 vs. TrEMBL
Match: A0A0A0KRE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G615230 PE=3 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 5.5e-44 Identity = 104/114 (91.23%), Postives = 111/114 (97.37%), Query Frame = 1
BLAST of CmaCh04G014240 vs. TrEMBL
Match: D7SN28_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g01600 PE=3 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 4.4e-41 Identity = 100/114 (87.72%), Postives = 107/114 (93.86%), Query Frame = 1
BLAST of CmaCh04G014240 vs. TrEMBL
Match: A5AGQ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003816 PE=3 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 4.4e-41 Identity = 100/114 (87.72%), Postives = 107/114 (93.86%), Query Frame = 1
BLAST of CmaCh04G014240 vs. TrEMBL
Match: S8D2Z2_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_00658 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.3e-40 Identity = 98/119 (82.35%), Postives = 109/119 (91.60%), Query Frame = 1
BLAST of CmaCh04G014240 vs. TrEMBL
Match: M5VRI2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012794mg PE=3 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 1.4e-39 Identity = 97/114 (85.09%), Postives = 106/114 (92.98%), Query Frame = 1
BLAST of CmaCh04G014240 vs. TAIR10
Match: AT3G44590.2 (AT3G44590.2 60S acidic ribosomal protein family) HSP 1 Score: 146.4 bits (368), Expect = 1.1e-35 Identity = 84/114 (73.68%), Postives = 96/114 (84.21%), Query Frame = 1
BLAST of CmaCh04G014240 vs. TAIR10
Match: AT2G27710.1 (AT2G27710.1 60S acidic ribosomal protein family) HSP 1 Score: 145.6 bits (366), Expect = 1.9e-35 Identity = 84/115 (73.04%), Postives = 97/115 (84.35%), Query Frame = 1
BLAST of CmaCh04G014240 vs. TAIR10
Match: AT2G27720.2 (AT2G27720.2 60S acidic ribosomal protein family) HSP 1 Score: 136.0 bits (341), Expect = 1.5e-32 Identity = 86/131 (65.65%), Postives = 98/131 (74.81%), Query Frame = 1
BLAST of CmaCh04G014240 vs. TAIR10
Match: AT5G40040.1 (AT5G40040.1 60S acidic ribosomal protein family) HSP 1 Score: 114.8 bits (286), Expect = 3.6e-26 Identity = 75/117 (64.10%), Postives = 92/117 (78.63%), Query Frame = 1
BLAST of CmaCh04G014240 vs. TAIR10
Match: AT3G28500.1 (AT3G28500.1 60S acidic ribosomal protein family) HSP 1 Score: 108.2 bits (269), Expect = 3.3e-24 Identity = 68/116 (58.62%), Postives = 90/116 (77.59%), Query Frame = 1
BLAST of CmaCh04G014240 vs. NCBI nr
Match: gi|659091858|ref|XP_008446770.1| (PREDICTED: 60S acidic ribosomal protein P2-4-like [Cucumis melo]) HSP 1 Score: 186.8 bits (473), Expect = 2.1e-44 Identity = 104/114 (91.23%), Postives = 111/114 (97.37%), Query Frame = 1
BLAST of CmaCh04G014240 vs. NCBI nr
Match: gi|449465545|ref|XP_004150488.1| (PREDICTED: 60S acidic ribosomal protein P2-4 [Cucumis sativus]) HSP 1 Score: 184.9 bits (468), Expect = 7.9e-44 Identity = 104/114 (91.23%), Postives = 111/114 (97.37%), Query Frame = 1
BLAST of CmaCh04G014240 vs. NCBI nr
Match: gi|720082507|ref|XP_010242613.1| (PREDICTED: 60S acidic ribosomal protein P2-like [Nelumbo nucifera]) HSP 1 Score: 179.1 bits (453), Expect = 4.4e-42 Identity = 100/114 (87.72%), Postives = 107/114 (93.86%), Query Frame = 1
BLAST of CmaCh04G014240 vs. NCBI nr
Match: gi|731394074|ref|XP_010651712.1| (PREDICTED: 60S acidic ribosomal protein P2 isoform X2 [Vitis vinifera]) HSP 1 Score: 175.3 bits (443), Expect = 6.3e-41 Identity = 100/114 (87.72%), Postives = 107/114 (93.86%), Query Frame = 1
BLAST of CmaCh04G014240 vs. NCBI nr
Match: gi|731394072|ref|XP_002266030.2| (PREDICTED: 60S acidic ribosomal protein P2 isoform X1 [Vitis vinifera]) HSP 1 Score: 175.3 bits (443), Expect = 6.3e-41 Identity = 100/114 (87.72%), Postives = 107/114 (93.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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