CmaCh04G006810 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G006810
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Late embryogenesis abundant hydroxyproline-rich glycoprotein
Location	Cma_Chr04 : 3465559 .. 3467306 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAAACATCACGACCACCACCCGCCATCAGGTCGCACAAACTTGGCGTCCTGTATAGTCGCCACGATCTTCTTAATCTTTGTCATCATCGTCGTCCTCATCGTCTTTTTCACCGTCTTTAAGCCTCAGGATCCAAAGATCGCCGTCTCCGCCGTCCAGTTGCCGTCCTTCTCCGTTGCCAACGGCACCGTTAATTTCACTTTCTCTCAGTACGTCTCTGTCAGAAACCCTAACAAAGCCTCTTTCTCTCACTATGACAGCTCACTCCAGCTCCTCTACTCTGGTTCCCAAATTGGATTCATGTTCATTCCTGCCGGGAAAATCGACTCCGGCCAGACGCAGTACATGGCAGCGACCTTCTCTGTCCAGTCATTCCCCTTGGCCGCTCCGGTCACTGCCATCGGAGCGGGACCGACTTACTCGGAGGGAATGAACGGGTACAGAATCGGACCGACACTGGAGATTGAATCGAAGATGGATATGGCCGGTAGGGTTAGGGTATTGCACTTCTTCACTCACCATGTGGAGGCCACATTGAGTTGCAGAGTCGCCATTGCTGTAAGTGATGGATCTGTGTTAGGTTTCCACTGCTAATTCTTCTTCTTCTTGTTTAGTTCCGGAAAATTTGGTCAGTTAAGTGTTTAAATTCTCATACTCAAAGTGAAAAGAAGAAAAAAAAAAACTCCAAAAAGATTTTGAGTTCTATCCATGAGCCATTTGTGGAATTGAATTGTAGAGTGATCTGATCTTAGATTTTGCTTTGGCTTAAGCTCTGTTTCTGCACTGAAATTCATCAGAAATCGCTTTTATTTTTGTGGATTTGTGAGTTTTTTTTATTAGGGTAATGAACCTAATTTTGATTCCTAAGGATAAATCTATGGCCATAAAGGAATGTTGATGTGAACAAAGGATGATTGCAATTGAAACAAAGAACAAAGTGGGATTGTACTCATTTTCTTTGGACTTTTTTTTATTATATTTTTTTCAGTTAAACAGATTGGTCACTAAGCAAAGTTTATCATTAATTCAAAGTTGCATCTGGCTAAGGATTTGAATACTGACGTTAGGTAGTTGGATTTATTTGGGTCTTCATCTTAGTCCTTCTTGAATTAAAATTTTTATTGTTTTGAATTATTTCATTTTCTCTGGACCCAGACATTTTGTACTGACCTAAAAATACGAAATAAAAATATAATTTAAATAAGTACTTGATGCCATGTAGAGTTTCAAGAATTAGGGAATTGGTGAATTATTATTTTCTAAATAATGATAAGTAATAATTAAATAAATATATTTCTAATGTGAATCTTTGAAACTAAAATAGAATAAAATCAAACATGAAATTCTTTTTCAATGAGTAGAGGCTTTTCTTTAGTTGAATCAATGTGGGTAGACTACTAAACTTTAAACTTTATAATTAGTTATTAACAAGAGCTTATCTATTTGATTATGCTTAGTAAAATAAACGATAATCTAAGGCTAAGATTCTAATCTTTAAAAAGTTTCAATTTTGTTTACTGAAATTCAGATTCGTTTGAACTTATCTTCACTGTGGAGAAGGTGAGTGAGAGAAAATTGAATGAGTGGGGACTGTTTGGTCAGAGTAAATAAAAGTTTCAAATTTGGCTGCAACTGTGGGTGGAAATCGAGACGGCAATAGAGAGAAAAGCTCTCCGACCAAAGGGGTGGCGGAGACGACGGTGGGCGGCGGCGATGAGAGAGGAGAAGGGAAGAGATGGGTGTAG

mRNA sequence

ATGAGGAAACATCACGACCACCACCCGCCATCAGGTCGCACAAACTTGGCGTCCTGTATAGTCGCCACGATCTTCTTAATCTTTGTCATCATCGTCGTCCTCATCGTCTTTTTCACCGTCTTTAAGCCTCAGGATCCAAAGATCGCCGTCTCCGCCGTCCAGTTGCCGTCCTTCTCCGTTGCCAACGGCACCGTTAATTTCACTTTCTCTCAGTACGTCTCTGTCAGAAACCCTAACAAAGCCTCTTTCTCTCACTATGACAGCTCACTCCAGCTCCTCTACTCTGGTTCCCAAATTGGATTCATGTTCATTCCTGCCGGGAAAATCGACTCCGGCCAGACGCAGTACATGGCAGCGACCTTCTCTGTCCAGTCATTCCCCTTGGCCGCTCCGGTCACTGCCATCGGAGCGGGACCGACTTACTCGGAGGGAATGAACGGGTACAGAATCGGACCGACACTGGAGATTGAATCGAAGATGGATATGGCCGGTAGGGTTAGGGTATTGCACTTCTTCACTCACCATGTGGAGGCCACATTGAGTTGCAGAGTCGCCATTGCTTTAAACAGATTGGTCACTAAGCAAAATTCGTTTGAACTTATCTTCACTGTGGAGAAGGTGAGTGAGAGAAAATTGAATGAGTGGGGACTGTTTGGTCAGATTTCAAATTTGGCTGCAACTGTGGGTGGAAATCGAGACGGCAATAGAGAGAAAAGCTCTCCGACCAAAGGGGTGGCGGAGACGACGGTGGGCGGCGGCGATGAGAGAGGAGAAGGGAAGAGATGGGTGTAG

Coding sequence (CDS)

ATGAGGAAACATCACGACCACCACCCGCCATCAGGTCGCACAAACTTGGCGTCCTGTATAGTCGCCACGATCTTCTTAATCTTTGTCATCATCGTCGTCCTCATCGTCTTTTTCACCGTCTTTAAGCCTCAGGATCCAAAGATCGCCGTCTCCGCCGTCCAGTTGCCGTCCTTCTCCGTTGCCAACGGCACCGTTAATTTCACTTTCTCTCAGTACGTCTCTGTCAGAAACCCTAACAAAGCCTCTTTCTCTCACTATGACAGCTCACTCCAGCTCCTCTACTCTGGTTCCCAAATTGGATTCATGTTCATTCCTGCCGGGAAAATCGACTCCGGCCAGACGCAGTACATGGCAGCGACCTTCTCTGTCCAGTCATTCCCCTTGGCCGCTCCGGTCACTGCCATCGGAGCGGGACCGACTTACTCGGAGGGAATGAACGGGTACAGAATCGGACCGACACTGGAGATTGAATCGAAGATGGATATGGCCGGTAGGGTTAGGGTATTGCACTTCTTCACTCACCATGTGGAGGCCACATTGAGTTGCAGAGTCGCCATTGCTTTAAACAGATTGGTCACTAAGCAAAATTCGTTTGAACTTATCTTCACTGTGGAGAAGGTGAGTGAGAGAAAATTGAATGAGTGGGGACTGTTTGGTCAGATTTCAAATTTGGCTGCAACTGTGGGTGGAAATCGAGACGGCAATAGAGAGAAAAGCTCTCCGACCAAAGGGGTGGCGGAGACGACGGTGGGCGGCGGCGATGAGAGAGGAGAAGGGAAGAGATGGGTGTAG

Protein sequence

MRKHHDHHPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGTVNFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSVQSFPLAAPVTAIGAGPTYSEGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCRVAIALNRLVTKQNSFELIFTVEKVSERKLNEWGLFGQISNLAATVGGNRDGNREKSSPTKGVAETTVGGGDERGEGKRWV

Homology

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BLAST of CmaCh04G006810 vs. TrEMBL
Match: A0A0A0KX26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G052640 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.0e-89
Identity = 167/185 (90.27%), Postives = 180/185 (97.30%), Query Frame = 1


Query: 5   HDHHPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGT 64
           H  HPPSGRTNLASC+VAT+FLIF+IIV+LIVFFTVFKPQDPKIAVSAVQLPSFSVANGT
Sbjct: 7   HGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSFSVANGT 66

Query: 65  VNFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSVQ 124
           +NFTFSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKID+GQTQYMAATFSVQ
Sbjct: 67  INFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMAATFSVQ 126

Query: 125 SFPLAAPVTAIGAGPTYSEGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCRV 184
           SFPLAAPV ++GAGPT+SEGMNGYR+GP LEIESKMDMAGRVRVLHFFTHHVEAT SCRV
Sbjct: 127 SFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEATSSCRV 186

Query: 185 AIALN 190
           AIA++
Sbjct: 187 AIAVS 191

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BLAST of CmaCh04G006810 vs. TrEMBL
Match: A0A067JZ66_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20441 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 9.1e-74
Identity = 145/191 (75.92%), Postives = 169/191 (88.48%), Query Frame = 1


Query: 9   PPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGTVNFT 68
           PPSGRTNLASCIVATIFLIFVII++LIVFFTVFKP+DPKI+V+AVQLPSFSV+N TVNFT
Sbjct: 7   PPSGRTNLASCIVATIFLIFVIIIILIVFFTVFKPKDPKISVNAVQLPSFSVSNNTVNFT 66

Query: 69  FSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSVQSFPL 128
           FSQYVSV+NPNKASFSHYDS+LQLLYSGSQ+GFMFIPAGKID+G+TQYMAATF+VQSFPL
Sbjct: 67  FSQYVSVKNPNKASFSHYDSTLQLLYSGSQVGFMFIPAGKIDAGRTQYMAATFAVQSFPL 126

Query: 129 -AAPVTAIGAGPTYSEGM---------NGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEA 188
            ++P  A+  GPT++ G+          GYR+GPT+EIES++ MAGRVRVLH FTHHVEA
Sbjct: 127 SSSPDAAVNVGPTFAGGVLPGGYPSVNGGYRVGPTMEIESRIHMAGRVRVLHIFTHHVEA 186

Query: 189 TLSCRVAIALN 190
              CRVAIA++
Sbjct: 187 KAGCRVAIAVS 197

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BLAST of CmaCh04G006810 vs. TrEMBL
Match: B9GXJ6_POPTR (Proline-rich family protein OS=Populus trichocarpa GN=POPTR_0003s14110g PE=4 SV=2)

HSP 1 Score: 281.2 bits (718), Expect = 1.3e-72
Identity = 140/194 (72.16%), Postives = 169/194 (87.11%), Query Frame = 1


Query: 7   HHPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGTVN 66
           H PPSGRTNLASCIVATIFLIF++I++LIVFFTVFKP+DPKI+V++VQLPSFSV+N TVN
Sbjct: 5   HRPPSGRTNLASCIVATIFLIFLVIIILIVFFTVFKPKDPKISVNSVQLPSFSVSNNTVN 64

Query: 67  FTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSVQSF 126
           FTFSQYVSV+NPN+A FSH+DS+LQLLYSGSQIGFMFIPAGKID+G+TQYMAATFSV+SF
Sbjct: 65  FTFSQYVSVKNPNRAVFSHFDSTLQLLYSGSQIGFMFIPAGKIDAGRTQYMAATFSVESF 124

Query: 127 PL-AAPVTAIGAGPTYSEG----------MNGYRIGPTLEIESKMDMAGRVRVLHFFTHH 186
           PL A+P  A+  GP +++G           NGYR+GPT+EIES++ MAGRVRVLHFFTHH
Sbjct: 125 PLSASPDAAVNVGPAFNDGGFGGGGQTGFNNGYRVGPTMEIESRIQMAGRVRVLHFFTHH 184

Query: 187 VEATLSCRVAIALN 190
           +E  + CRV IA++
Sbjct: 185 LETKVGCRVVIAVS 198

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BLAST of CmaCh04G006810 vs. TrEMBL
Match: B9RCU1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1692280 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.9e-72
Identity = 141/192 (73.44%), Postives = 167/192 (86.98%), Query Frame = 1


Query: 7   HHPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGTVN 66
           H PPSGRTNLASCIVATIFLIFVII++LIVFFTVFKP+DPKI+V+AVQLPSFSV+N TVN
Sbjct: 5   HRPPSGRTNLASCIVATIFLIFVIIIILIVFFTVFKPKDPKISVNAVQLPSFSVSNNTVN 64

Query: 67  FTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSVQSF 126
           FTFSQYVSV+NPN+A+FSHYDS+LQLLYSGSQ+GFMFIPAGKI+SG+TQYMAATF+VQSF
Sbjct: 65  FTFSQYVSVKNPNRATFSHYDSTLQLLYSGSQVGFMFIPAGKIESGRTQYMAATFAVQSF 124

Query: 127 PL-AAPVTAIGAGPTYS--------EGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVE 186
           PL ++P  A+  GP ++           NG+R+GPT+EIES++ M GRVRVLH FTHHVE
Sbjct: 125 PLSSSPDAAVNVGPAFTGSGFPGVPGSSNGFRVGPTMEIESRIQMVGRVRVLHIFTHHVE 184

Query: 187 ATLSCRVAIALN 190
           A   CRVAIA++
Sbjct: 185 AKAECRVAIAVS 196

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BLAST of CmaCh04G006810 vs. TrEMBL
Match: I1KPK7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G023500 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.5e-71
Identity = 141/185 (76.22%), Postives = 163/185 (88.11%), Query Frame = 1


Query: 9   PPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGTVNFT 68
           PPSGRTNLASC+VATIFLIF++IV+LIV++T+FKPQDPKIAV+AVQLPSFSVANGTVNFT
Sbjct: 18  PPSGRTNLASCVVATIFLIFIVIVILIVYYTIFKPQDPKIAVNAVQLPSFSVANGTVNFT 77

Query: 69  FSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSVQSFPL 128
           FSQY SVRNPN+A+FSHYDSSLQL+YSGSQ+GFMFIPAG+ID+G+TQYMAATFSVQSFPL
Sbjct: 78  FSQYASVRNPNRAAFSHYDSSLQLIYSGSQVGFMFIPAGEIDAGRTQYMAATFSVQSFPL 137

Query: 129 AAPVTAIGAGPTYSEGMN-----GYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCR 188
           +AP      GPT + G       G R+ PTLEIESK++MAGRV+VLHFFTHHV A   CR
Sbjct: 138 SAPPR---MGPTLANGDGVGFNYGLRVEPTLEIESKLEMAGRVKVLHFFTHHVYAKAGCR 197

[Close]

BLAST of CmaCh04G006810 vs. TAIR10
Match: AT4G23930.1 (AT4G23930.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 196.4 bits (498), Expect = 2.1e-50
Identity = 99/174 (56.90%), Postives = 141/174 (81.03%), Query Frame = 1


Query: 14  TNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGTVNFTFSQYV 73
           +NLASC VAT+F++F+II  L V+ TVF+P+DP+I+V++V++PSFSVAN +V+FTFSQ+ 
Sbjct: 6   SNLASCAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSFSVANSSVSFTFSQFS 65

Query: 74  SVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSVQSFPLAAPVT 133
           +VRNPN+A+FSHY++ +QL Y G++IG+ F+PAG+I+SG+T+ M ATFSVQSFPLAA   
Sbjct: 66  AVRNPNRAAFSHYNNVIQLFYYGNRIGYTFVPAGEIESGRTKRMLATFSVQSFPLAA--- 125

Query: 134 AIGAGPTYSEGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCRVAIA 188
           A  +  + ++  N  R G T+EIESK++MAGRVRVL  FTH + A  +CR+AI+
Sbjct: 126 ASSSQISAAQFQNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNCRIAIS 176

[Close]

BLAST of CmaCh04G006810 vs. TAIR10
Match: AT1G64450.1 (AT1G64450.1 Glycine-rich protein family)

HSP 1 Score: 196.1 bits (497), Expect = 2.8e-50
Identity = 94/131 (71.76%), Postives = 117/131 (89.31%), Query Frame = 1


Query: 1   MRKHHDHHPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSV 60
           M K HD    SGRTNLASC VAT+FL+ +++V+L+V+FTVFKP+DPKI+V+AVQLPSF+V
Sbjct: 1   MAKPHDRRRSSGRTNLASCAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSFAV 60

Query: 61  ANGTVNFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAAT 120
           +N T NF+FSQYV+VRNPN+A FSHYDSS+QLLYSG+Q+GFMFIPAGKIDSG+ QYMAAT
Sbjct: 61  SNNTANFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQYMAAT 120

Query: 121 FSVQSFPLAAP 132
           F+V SFP++ P
Sbjct: 121 FTVHSFPISPP 131

[Close]

BLAST of CmaCh04G006810 vs. TAIR10
Match: AT3G54200.1 (AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 63.2 bits (152), Expect = 2.8e-10
Identity = 55/192 (28.65%), Postives = 99/192 (51.56%), Query Frame = 1


Query: 13  RTNLASCIVATIFLIFVI-IVVLIVFFTVFKPQDPKIAVSAVQLPSFSVA------NGTV 72
           + N   CI  TI LI +I IV++I+ FT+FKP+ P   + +V +     +         +
Sbjct: 48  KRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTIDSVTVDRLQASVNPLLLKVLL 107

Query: 73  NFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSVQS 132
           N T +  +S++NPN+  FS+  SS  L Y G  IG   +PA +I + +T  +  T ++ +
Sbjct: 108 NLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTLMA 167

Query: 133 FPLAAPVTAIGAGPTYSEGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCRVA 192
             L +    +      S+ M G      + + + + + G+V VL  F   V+++ SC ++
Sbjct: 168 DRLLSETQLL------SDVMAG-----VIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLS 227

Query: 193 IAL-NRLVTKQN 197
           I++ +R VT Q+
Sbjct: 228 ISVSDRNVTSQH 228

[Close]

BLAST of CmaCh04G006810 vs. TAIR10
Match: AT2G46150.1 (AT2G46150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 55.8 bits (133), Expect = 4.5e-08
Identity = 46/186 (24.73%), Postives = 82/186 (44.09%), Query Frame = 1


Query: 8   HPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGT--- 67
           H    R   + C+ AT  ++  I++ L+  FTVF+ +DP I ++ V +       GT   
Sbjct: 30  HRSRNRIKCSICVTATSLILTTIVLTLV--FTVFRVKDPIIKMNGVMVNGLDSVTGTNQV 89

Query: 68  ----VNFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAAT 127
                N +    VSV+NPN ASF + +++  + Y G+ +G      GK    +T  M  T
Sbjct: 90  QLLGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKARPHRTSRMNVT 149

Query: 128 FSVQSFPLAAPVTAIGAGPTYSEGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATL 187
             +    L   ++  G G   S           + + S   + G+V+++     HV   +
Sbjct: 150 VDIM---LDRILSDPGLGREISR-------SGLVNVWSYTRVGGKVKIMGIVKKHVTVKM 203

[Close]

BLAST of CmaCh04G006810 vs. NCBI nr
Match: gi|449462527|ref|XP_004148992.1| (PREDICTED: uncharacterized protein LOC101209064 [Cucumis sativus])

HSP 1 Score: 337.0 bits (863), Expect = 2.9e-89
Identity = 167/185 (90.27%), Postives = 180/185 (97.30%), Query Frame = 1


Query: 5   HDHHPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGT 64
           H  HPPSGRTNLASC+VAT+FLIF+IIV+LIVFFTVFKPQDPKIAVSAVQLPSFSVANGT
Sbjct: 7   HGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSFSVANGT 66

Query: 65  VNFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSVQ 124
           +NFTFSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKID+GQTQYMAATFSVQ
Sbjct: 67  INFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYMAATFSVQ 126

Query: 125 SFPLAAPVTAIGAGPTYSEGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCRV 184
           SFPLAAPV ++GAGPT+SEGMNGYR+GP LEIESKMDMAGRVRVLHFFTHHVEAT SCRV
Sbjct: 127 SFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVEATSSCRV 186

Query: 185 AIALN 190
           AIA++
Sbjct: 187 AIAVS 191

[Close]

BLAST of CmaCh04G006810 vs. NCBI nr
Match: gi|659102111|ref|XP_008451958.1| (PREDICTED: uncharacterized protein LOC103493106 [Cucumis melo])

HSP 1 Score: 321.2 bits (822), Expect = 1.6e-84
Identity = 160/181 (88.40%), Postives = 175/181 (96.69%), Query Frame = 1


Query: 9   PPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGTVNFT 68
           PPSGRTNLASC+VAT+FLIF+IIV+LIVFFTVFKPQDPKIAVSAVQLPSFSV NGT+NFT
Sbjct: 11  PPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSFSVTNGTINFT 70

Query: 69  FSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSVQSFPL 128
           FSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKI++GQTQYMAATFSVQSFPL
Sbjct: 71  FSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIEAGQTQYMAATFSVQSFPL 130

Query: 129 AAPVTAIGAGPTYSEGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCRVAIAL 188
           A+PV A+GAGPT+S GMNGYR+GP LEIESKMDMAGRVRVL+FFTHHVEA  SCRVAIA+
Sbjct: 131 ASPVAAVGAGPTFSGGMNGYRVGPILEIESKMDMAGRVRVLNFFTHHVEAISSCRVAIAV 190

Query: 189 N 190
           +
Sbjct: 191 S 191

[Close]

BLAST of CmaCh04G006810 vs. NCBI nr
Match: gi|802733826|ref|XP_012086703.1| (PREDICTED: uncharacterized protein LOC105645659 [Jatropha curcas])

HSP 1 Score: 285.0 bits (728), Expect = 1.3e-73
Identity = 145/191 (75.92%), Postives = 169/191 (88.48%), Query Frame = 1


Query: 9   PPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGTVNFT 68
           PPSGRTNLASCIVATIFLIFVII++LIVFFTVFKP+DPKI+V+AVQLPSFSV+N TVNFT
Sbjct: 7   PPSGRTNLASCIVATIFLIFVIIIILIVFFTVFKPKDPKISVNAVQLPSFSVSNNTVNFT 66

Query: 69  FSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSVQSFPL 128
           FSQYVSV+NPNKASFSHYDS+LQLLYSGSQ+GFMFIPAGKID+G+TQYMAATF+VQSFPL
Sbjct: 67  FSQYVSVKNPNKASFSHYDSTLQLLYSGSQVGFMFIPAGKIDAGRTQYMAATFAVQSFPL 126

Query: 129 -AAPVTAIGAGPTYSEGM---------NGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEA 188
            ++P  A+  GPT++ G+          GYR+GPT+EIES++ MAGRVRVLH FTHHVEA
Sbjct: 127 SSSPDAAVNVGPTFAGGVLPGGYPSVNGGYRVGPTMEIESRIHMAGRVRVLHIFTHHVEA 186

Query: 189 TLSCRVAIALN 190
              CRVAIA++
Sbjct: 187 KAGCRVAIAVS 197

[Close]

BLAST of CmaCh04G006810 vs. NCBI nr
Match: gi|566162577|ref|XP_002304562.2| (proline-rich family protein [Populus trichocarpa])

HSP 1 Score: 281.2 bits (718), Expect = 1.9e-72
Identity = 140/194 (72.16%), Postives = 169/194 (87.11%), Query Frame = 1


Query: 7   HHPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGTVN 66
           H PPSGRTNLASCIVATIFLIF++I++LIVFFTVFKP+DPKI+V++VQLPSFSV+N TVN
Sbjct: 5   HRPPSGRTNLASCIVATIFLIFLVIIILIVFFTVFKPKDPKISVNSVQLPSFSVSNNTVN 64

Query: 67  FTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSVQSF 126
           FTFSQYVSV+NPN+A FSH+DS+LQLLYSGSQIGFMFIPAGKID+G+TQYMAATFSV+SF
Sbjct: 65  FTFSQYVSVKNPNRAVFSHFDSTLQLLYSGSQIGFMFIPAGKIDAGRTQYMAATFSVESF 124

Query: 127 PL-AAPVTAIGAGPTYSEG----------MNGYRIGPTLEIESKMDMAGRVRVLHFFTHH 186
           PL A+P  A+  GP +++G           NGYR+GPT+EIES++ MAGRVRVLHFFTHH
Sbjct: 125 PLSASPDAAVNVGPAFNDGGFGGGGQTGFNNGYRVGPTMEIESRIQMAGRVRVLHFFTHH 184

Query: 187 VEATLSCRVAIALN 190
           +E  + CRV IA++
Sbjct: 185 LETKVGCRVVIAVS 198

[Close]

BLAST of CmaCh04G006810 vs. NCBI nr
Match: gi|1012093032|ref|XP_015955318.1| (PREDICTED: proline-rich receptor-like protein kinase PERK3 [Arachis duranensis])

HSP 1 Score: 280.4 bits (716), Expect = 3.2e-72
Identity = 143/185 (77.30%), Postives = 163/185 (88.11%), Query Frame = 1


Query: 9   PPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGTVNFT 68
           PPSGRTNLASC+VATIFLIF+IIV+LIV+FTVFKPQDPKIAVSAVQLPSFSV NGTVNFT
Sbjct: 76  PPSGRTNLASCVVATIFLIFIIIVILIVYFTVFKPQDPKIAVSAVQLPSFSVVNGTVNFT 135

Query: 69  FSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSVQSFPL 128
           FSQY SVRNPN+A+FSHYDSSLQLLYSG+Q+GFMFIPAG+ID+G+T+YMAATFSVQSFPL
Sbjct: 136 FSQYASVRNPNRAAFSHYDSSLQLLYSGTQVGFMFIPAGEIDAGRTKYMAATFSVQSFPL 195

Query: 129 AAPVTAIGAGPTYSEGMN-----GYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCR 188
           AAP  A+   PT   G       G R+ PT+EIESK++MAGRVRVLHFF+H V+AT  CR
Sbjct: 196 AAPPVAMTGMPTVMNGGGVGFNYGMRVQPTMEIESKLEMAGRVRVLHFFSHRVQATAGCR 255

The following BLAST results are available for this feature:

BLAST of CmaCh04G006810 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh04G006810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KX26_CUCSA	2.0e-89	90.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G052640 PE=4 SV=1	[more]
A0A067JZ66_JATCU	9.1e-74	75.92	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20441 PE=4 SV=1	[more]
B9GXJ6_POPTR	1.3e-72	72.16	Proline-rich family protein OS=Populus trichocarpa GN=POPTR_0003s14110g PE=4 SV=...	[more]
B9RCU1_RICCO	2.9e-72	73.44	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1692280 PE=4 SV=1	[more]
I1KPK7_SOYBN	2.5e-71	76.22	Uncharacterized protein OS=Glycine max GN=GLYMA_08G023500 PE=4 SV=1	[more]

BLAST of CmaCh04G006810 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23930.1	2.1e-50	56.90	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT1G64450.1	2.8e-50	71.76	Glycine-rich protein family	[more]
AT3G54200.1	2.8e-10	28.65	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT2G46150.1	4.5e-08	24.73	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]

BLAST of CmaCh04G006810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462527\|ref\|XP_004148992.1\|	2.9e-89	90.27	PREDICTED: uncharacterized protein LOC101209064 [Cucumis sativus]	[more]
gi\|659102111\|ref\|XP_008451958.1\|	1.6e-84	88.40	PREDICTED: uncharacterized protein LOC103493106 [Cucumis melo]	[more]
gi\|802733826\|ref\|XP_012086703.1\|	1.3e-73	75.92	PREDICTED: uncharacterized protein LOC105645659 [Jatropha curcas]	[more]
gi\|566162577\|ref\|XP_002304562.2\|	1.9e-72	72.16	proline-rich family protein [Populus trichocarpa]	[more]
gi\|1012093032\|ref\|XP_015955318.1\|	3.2e-72	77.30	PREDICTED: proline-rich receptor-like protein kinase PERK3 [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G006810.1	CmaCh04G006810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 73..182 score: 3.0
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 7..189 score: 2.4E
None	No IPR available	PANTHER	PTHR31852:SF22	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN	coord: 7..189 score: 2.4E
None	No IPR available	unknown	SSF117070	LEA14-like	coord: 28..147 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G006810	Cucsa.114930	Cucumber (Gy14) v1	cgycmaB0279
CmaCh04G006810	Cla012811	Watermelon (97103) v1	cmawmB694
CmaCh04G006810	Csa4G052640	Cucumber (Chinese Long) v2	cmacuB713
CmaCh04G006810	MELO3C016302	Melon (DHL92) v3.5.1	cmameB703
CmaCh04G006810	ClCG07G011530	Watermelon (Charleston Gray)	cmawcgB671
CmaCh04G006810	CSPI04G06460	Wild cucumber (PI 183967)	cmacpiB721
CmaCh04G006810	CmoCh04G007260	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G006810	Lsi07G007260	Bottle gourd (USVL1VR-Ls)	cmalsiB699
CmaCh04G006810	Cp4.1LG01g00540	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G006810	MELO3C016302.2	Melon (DHL92) v3.6.1	cmamedB792
CmaCh04G006810	CsaV3_4G006680	Cucumber (Chinese Long) v3	cmacucB0847
CmaCh04G006810	Cla97C07G138290	Watermelon (97103) v2	cmawmbB776
CmaCh04G006810	Bhi01G002307	Wax gourd	cmawgoB0853
CmaCh04G006810	CsGy4G006380	Cucumber (Gy14) v2	cgybcmaB547
CmaCh04G006810	Carg13077	Silver-seed gourd	carcmaB0055

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G006810	Silver-seed gourd	carcmaB0509
CmaCh04G006810	Cucumber (Chinese Long) v3	cmacucB0872
CmaCh04G006810	Watermelon (97103) v2	cmawmbB706
CmaCh04G006810	Wax gourd	cmawgoB0829
CmaCh04G006810	Cucurbita maxima (Rimu)	cmacmaB328
CmaCh04G006810	Cucurbita maxima (Rimu)	cmacmaB350
CmaCh04G006810	Cucurbita moschata (Rifu)	cmacmoB697
CmaCh04G006810	Cucurbita moschata (Rifu)	cmacmoB700
CmaCh04G006810	Melon (DHL92) v3.5.1	cmameB638
CmaCh04G006810	Melon (DHL92) v3.5.1	cmameB694
CmaCh04G006810	Watermelon (Charleston Gray)	cmawcgB635
CmaCh04G006810	Watermelon (97103) v1	cmawmB712
CmaCh04G006810	Cucurbita pepo (Zucchini)	cmacpeB714
CmaCh04G006810	Bottle gourd (USVL1VR-Ls)	cmalsiB624
CmaCh04G006810	Cucumber (Gy14) v2	cgybcmaB661
CmaCh04G006810	Melon (DHL92) v3.6.1	cmamedB724
CmaCh04G006810	Melon (DHL92) v3.6.1	cmamedB782