CmaCh04G001190 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G001190
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_78
Location	Cma_Chr04 : 574253 .. 575589 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAATCGCTTCCATTGGCGTCTCGCCTTCAACAATTCGCCAAGGTCGTCGTCTCCTCCAAAAAGCCCCAATCACCCACGCCCAGGCAGAAGCCCAAGATCCGAGTTTCGCCGCCTGAAACTCCGATCTCCGATTCCGTCCGAGTCATCTCGGAACCGGCGCAGCCGAAGAAGAACATGGAGGTGAAGAATCGAATTCCGTTGGCCGATGTGGTGTCGGACTGCGCCAAACGGTGGTTCCAGGACACGCTCAAGGAGGCAAACGCCGGCGATACGGCAATGCAGGTCTTGGTAGGGCAGATGTTTTGCTCTGGCTATGGAGTTCCCAAGGACACTCGGAAGGTTCGCTTTTCGTTTTGATTTCTACATTTTGAGTATTCGTGTTGATTTCTTACGGACGAATGGATTTGGGGAATTAGAGACGATTTGTGTGTGATTTGAGAGGAACCTTGAAGGATTGTGATTATATTTCGGTTAATCTGTTGGTTAAGAGAATGTAGGTACTCACGGGATTAAGTTCATTCAAGAATTCCATTCAATTAGTGGGTGTATTTTAGAGCTGCTGAGATTATTCTATAGGTTGTATTGTTCGATATTGAATCGAGATTGGGGGAGCCTCTTTAAGGGCATTGTTCTTTGCTATTACGTAATTTTTGGCTTGGGAGAAACAAGAGGCCTTTCATGGTGTTTGACTCTGAAGGTTTTGCCTCTTATTCTTTATAACTAGAGTCATTTTTGCCAATACGGGCATACCTCAACTAGTTAAGGCATATATTATTCACCTATAAGTTAGCGGTTTAAATCCCCACACCCACGTATCATTGAACCAAAATATAACTAGAGTCGTTTTTATGATCAACTTCCTTTCCTAGTACCCTACCCACAGGGGAAGTCGAATCCCGCTGCCTCCTTGAAAGAGAGATGTCCTGAACCACTAGACGATGGGGGCATGCTTGCCCGACTGCCACAACACTTCTTTTTGTGGCGATTTTTTTCTTTACTTTTTCCCACAATACATCATATAGTATCCTAATTTTCAGAATCCCTTTTGAATATATAAATTAAATTTCTCTAGAGGAAAAAGTAGTATCATTCTAATGTTCAAATAAATGTTGGGTTTCTGAATTAAGGGGCTTGCTTGGATCAGTCGAGCTTCTAAATATCAGGCATCAGTTCGGAAAGCAAGCGATAGACATCCAGGTATTCCAGTCCTCCATGTAGTTCAGTTGAGATAGTAATCTTTTGGAATTGCTTCCTAAGTTTTCCGAACGTTTTTTTGTTCTTTAGGTTACTTAGCCACCGATTCGGAATCAAGCGATAGGAGGGTCAAATGA

mRNA sequence

ATGGCAAAATCGCTTCCATTGGCGTCTCGCCTTCAACAATTCGCCAAGGTCGTCGTCTCCTCCAAAAAGCCCCAATCACCCACGCCCAGGCAGAAGCCCAAGATCCGAGTTTCGCCGCCTGAAACTCCGATCTCCGATTCCGTCCGAGTCATCTCGGAACCGGCGCAGCCGAAGAAGAACATGGAGGTGAAGAATCGAATTCCGTTGGCCGATGTGGTGTCGGACTGCGCCAAACGGTGGTTCCAGGACACGCTCAAGGAGGCAAACGCCGGCGATACGGCAATGCAGGTCTTGGTAGGGCAGATGTTTTGCTCTGGCTATGGAGTTCCCAAGGACACTCGGAAGGGGCTTGCTTGGATCAGTCGAGCTTCTAAATATCAGGCATCAGTTCGGAAAGCAAGCGATAGACATCCAGGTTACTTAGCCACCGATTCGGAATCAAGCGATAGGAGGGTCAAATGA

Coding sequence (CDS)

ATGGCAAAATCGCTTCCATTGGCGTCTCGCCTTCAACAATTCGCCAAGGTCGTCGTCTCCTCCAAAAAGCCCCAATCACCCACGCCCAGGCAGAAGCCCAAGATCCGAGTTTCGCCGCCTGAAACTCCGATCTCCGATTCCGTCCGAGTCATCTCGGAACCGGCGCAGCCGAAGAAGAACATGGAGGTGAAGAATCGAATTCCGTTGGCCGATGTGGTGTCGGACTGCGCCAAACGGTGGTTCCAGGACACGCTCAAGGAGGCAAACGCCGGCGATACGGCAATGCAGGTCTTGGTAGGGCAGATGTTTTGCTCTGGCTATGGAGTTCCCAAGGACACTCGGAAGGGGCTTGCTTGGATCAGTCGAGCTTCTAAATATCAGGCATCAGTTCGGAAAGCAAGCGATAGACATCCAGGTTACTTAGCCACCGATTCGGAATCAAGCGATAGGAGGGTCAAATGA

Protein sequence

MAKSLPLASRLQQFAKVVVSSKKPQSPTPRQKPKIRVSPPETPISDSVRVISEPAQPKKNMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAWISRASKYQASVRKASDRHPGYLATDSESSDRRVK

Homology

[Close]

BLAST of CmaCh04G001190 vs. TrEMBL
Match: A0A0A0KM25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218760 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 7.2e-55
Identity = 121/154 (78.57%), Postives = 129/154 (83.77%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTPRQKPKIRVSPPETPISDSVRVISEPAQPK-K 60
           MAKSLP  +R QQFAK+V SSK PQS    +K +IR SP ETPIS SVRVISEP + K  
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQP--KKSRIRASPSETPISGSVRVISEPNKNKYM 60

Query: 61  NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120
             E KNR PLADVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120

Query: 121 ISRASKYQASVRKASDRHPGYLATDSESSDRRVK 154
           I RASKYQASV KASDRHPGYLATDSESSDRRVK
Sbjct: 121 IYRASKYQASVWKASDRHPGYLATDSESSDRRVK 152

[Close]

BLAST of CmaCh04G001190 vs. TrEMBL
Match: F6HC95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02170 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.2e-35
Identity = 87/150 (58.00%), Postives = 106/150 (70.67%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTPRQKPKIRVSPPETPISDSVRVISEPAQPK-K 60
           M KSLP  +RLQ+FA+VV S K       +   + RVSPPET      R+ SE  + K +
Sbjct: 1   MGKSLPTTTRLQEFARVVTSEKFQSPKHAKPISRNRVSPPETTKLRGARLGSERVRLKME 60

Query: 61  NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120
           + E + R+PLA VVSDCAKRWFQDTLKEA AGDT MQVLVGQM+ SGYGV +D +KG AW
Sbjct: 61  SSEGQRRMPLAQVVSDCAKRWFQDTLKEAKAGDTTMQVLVGQMYFSGYGVSRDAQKGRAW 120

Query: 121 ISRASKYQASVRKASDRHPGYLATDSESSD 150
           ISRASK ++S  K  D+HPGY A+DS+S D
Sbjct: 121 ISRASKSRSSALKVGDKHPGYNASDSDSDD 150

[Close]

BLAST of CmaCh04G001190 vs. TrEMBL
Match: M5X2M1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012708mg PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.3e-34
Identity = 82/151 (54.30%), Postives = 111/151 (73.51%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPT-PRQKPKIRVSPPETPISDSVRVISEPAQPK- 60
           M K+LP A+R Q+F +VV + K P  P   +Q  ++R+SPP+ P S+S RV  E  + K 
Sbjct: 1   MGKALPTATRFQEFTRVVSADKLPGRPRRTKQVSQVRISPPQAPKSESFRVDPERIKLKM 60

Query: 61  KNMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLA 120
           ++ E ++R+PLA VVSDC KRWFQDTLKEA AGD++MQVLVGQM+ SGYGV +D +KG A
Sbjct: 61  ESSEGQSRVPLARVVSDCVKRWFQDTLKEAKAGDSSMQVLVGQMYYSGYGVSRDAKKGQA 120

Query: 121 WISRASKYQASVRKASDRHPGYLATDSESSD 150
           W++RASK + SV K S++ PGY A+DS S +
Sbjct: 121 WMNRASKSRTSVWKVSNKPPGYNASDSNSDE 151

[Close]

BLAST of CmaCh04G001190 vs. TrEMBL
Match: A0A059A9L5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00156 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.2e-31
Identity = 89/171 (52.05%), Postives = 110/171 (64.33%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTPRQKP--KIRVSPPETPI----------SDSV 60
           M KS+P A+RLQ FA+ V SS K + P  + KP  +IRVS PET               V
Sbjct: 1   MGKSIPSATRLQDFARAVSSSDKLRLPK-QAKPISRIRVSTPETSRPGGSGGGGGGGGGV 60

Query: 61  RVISEPAQPKKNMEV----------KNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVL 120
           R       PKK MEV            R+PLA VVSDCA+RWFQDTL+EA AGD AMQVL
Sbjct: 61  RT-----DPKKKMEVGRAKSLELERNTRLPLAQVVSDCARRWFQDTLREAKAGDGAMQVL 120

Query: 121 VGQMFCSGYGVPKDTRKGLAWISRASKYQASVRKASDRHPGYLATDSESSD 150
           VGQM+ SGYGVP+D +KG AWI++ASK ++SV + SD+ PGY A+DS+S +
Sbjct: 121 VGQMYNSGYGVPRDPQKGRAWINKASKARSSVWRVSDKQPGYNASDSDSGE 165

[Close]

BLAST of CmaCh04G001190 vs. TrEMBL
Match: A0A0J8CYL8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g029590 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 9.4e-31
Identity = 79/155 (50.97%), Postives = 102/155 (65.81%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSK--KPQSPTPRQKPKIRVSPPETPISDSVRVISEPAQPK 60
           M KSLP  + L+ FA+++ S K   P+   P    K+  S P++    +     + AQ  
Sbjct: 1   MGKSLPSTAGLKNFARIITSEKIFPPKQVKPTSNNKVSTSIPKSATEPTKMSRVDSAQLS 60

Query: 61  KNME----VKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTR 120
             ME     + R+PLA+VVSDCA+RWFQDTLKEA  GDTAMQVLVGQM+ SGYGVPK+T 
Sbjct: 61  LKMENSSVSRTRVPLAEVVSDCARRWFQDTLKEARDGDTAMQVLVGQMYNSGYGVPKNTE 120

Query: 121 KGLAWISRASKYQASVRKASDRHPGYLATDSESSD 150
           KG  WI+RASK ++S  + SD+ PGY A+DSES D
Sbjct: 121 KGRTWITRASKSRSSAWRVSDKQPGYNASDSESQD 155

[Close]

BLAST of CmaCh04G001190 vs. TAIR10
Match: AT5G05360.1 (AT5G05360.1 unknown protein)

HSP 1 Score: 125.6 bits (314), Expect = 2.7e-29
Identity = 73/158 (46.20%), Postives = 103/158 (65.19%), Query Frame = 1


Query: 10  RLQQFAKVVVSSKKPQ-----SPTPRQKPKIRVSPPETP----ISDSVRVI-------SE 69
           R  +FA + +SS+ P      SP+PR K  ++ +  +T      S+ V++        S 
Sbjct: 7   RFAEFA-IRLSSENPTRPHRPSPSPRNKVFVKKTTRDTTSHLDYSNLVKLEKAGSHSGSN 66

Query: 70  PAQPKKNMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDT 129
           PA P    +  NR+PLA VV DC +RWFQDTLKEA +GD  MQVLVGQM+CSGYG+PKD 
Sbjct: 67  PA-PASGSDPINRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDE 126

Query: 130 RKGLAWISRASKYQASVRKASDRHPGYLATDSESSDRR 152
            KG AWI++AS+ ++S  + SD+ PGY A+DS+S+D++
Sbjct: 127 NKGRAWINKASRTRSSAWQVSDKPPGYNASDSDSNDKK 162

[Close]

BLAST of CmaCh04G001190 vs. TAIR10
Match: AT2G38450.1 (AT2G38450.1 Sel1-like (InterPro:IPR006597))

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25
Identity = 66/150 (44.00%), Postives = 90/150 (60.00%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVV---VSSKKPQSPTPRQKPKIRVSPPETPISDSVRVISEPAQP 60
           M KS+P+ + L+  +  V   + S KP  P        + S   T  S++ R        
Sbjct: 1   MGKSIPVKTGLRGASAAVAGFIKSSKPIRPISSMDSSDKDSSSTTTTSETTRRF------ 60

Query: 61  KKNMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGL 120
                    +PL+ VVSDCAKRWF+DTL+EA AG+  MQVL+GQM+ SGYGVPKD RKG 
Sbjct: 61  ---------VPLSSVVSDCAKRWFKDTLEEAKAGNITMQVLLGQMYYSGYGVPKDARKGR 120

Query: 121 AWISRASKYQASVRKASDRHPGYLATDSES 148
            WI++AS+ ++SV K  D+ PGY A+DS+S
Sbjct: 121 LWITKASRVRSSVWKVIDKRPGYNASDSDS 135

[Close]

BLAST of CmaCh04G001190 vs. NCBI nr
Match: gi|449457439|ref|XP_004146456.1| (PREDICTED: uncharacterized protein LOC101213931 isoform X2 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 1.0e-54
Identity = 121/154 (78.57%), Postives = 129/154 (83.77%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTPRQKPKIRVSPPETPISDSVRVISEPAQPK-K 60
           MAKSLP  +R QQFAK+V SSK PQS    +K +IR SP ETPIS SVRVISEP + K  
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQP--KKSRIRASPSETPISGSVRVISEPNKNKYM 60

Query: 61  NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120
             E KNR PLADVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120

Query: 121 ISRASKYQASVRKASDRHPGYLATDSESSDRRVK 154
           I RASKYQASV KASDRHPGYLATDSESSDRRVK
Sbjct: 121 IYRASKYQASVWKASDRHPGYLATDSESSDRRVK 152

[Close]

BLAST of CmaCh04G001190 vs. NCBI nr
Match: gi|659114090|ref|XP_008456900.1| (PREDICTED: uncharacterized protein LOC103496713 isoform X2 [Cucumis melo])

HSP 1 Score: 214.5 bits (545), Expect = 1.3e-52
Identity = 117/154 (75.97%), Postives = 128/154 (83.12%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTPRQKPKIRVSPPETPISDSVRVISEPAQPKKN 60
           MAKSLP  +R QQFAK+V SSK PQSP   +K +IR SP ETPIS SVRVI EP + K  
Sbjct: 1   MAKSLPSPTRFQQFAKLVFSSKNPQSPP--KKSRIRASPSETPISGSVRVILEPNKNKYM 60

Query: 61  MEV-KNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120
            E  KNR PL+DVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  EEKEKNRTPLSDVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120

Query: 121 ISRASKYQASVRKASDRHPGYLATDSESSDRRVK 154
           I RASKYQ SV KAS+RHPGYLATDSESS+RRVK
Sbjct: 121 IYRASKYQPSVWKASERHPGYLATDSESSNRRVK 152

[Close]

BLAST of CmaCh04G001190 vs. NCBI nr
Match: gi|449457437|ref|XP_004146455.1| (PREDICTED: uncharacterized protein LOC101213931 isoform X1 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-50
Identity = 121/178 (67.98%), Postives = 129/178 (72.47%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTPRQKPKIRVSPPETPISDSVRVISEPAQPK-K 60
           MAKSLP  +R QQFAK+V SSK PQS    +K +IR SP ETPIS SVRVISEP + K  
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQP--KKSRIRASPSETPISGSVRVISEPNKNKYM 60

Query: 61  NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120
             E KNR PLADVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120

Query: 121 ISRASKYQASVRKASDRHP------------------------GYLATDSESSDRRVK 154
           I RASKYQASV KASDRHP                        GYLATDSESSDRRVK
Sbjct: 121 IYRASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRRVK 176

[Close]

BLAST of CmaCh04G001190 vs. NCBI nr
Match: gi|659114088|ref|XP_008456899.1| (PREDICTED: uncharacterized protein LOC103496713 isoform X1 [Cucumis melo])

HSP 1 Score: 201.1 bits (510), Expect = 1.4e-48
Identity = 117/178 (65.73%), Postives = 128/178 (71.91%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTPRQKPKIRVSPPETPISDSVRVISEPAQPKKN 60
           MAKSLP  +R QQFAK+V SSK PQSP   +K +IR SP ETPIS SVRVI EP + K  
Sbjct: 1   MAKSLPSPTRFQQFAKLVFSSKNPQSPP--KKSRIRASPSETPISGSVRVILEPNKNKYM 60

Query: 61  MEV-KNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120
            E  KNR PL+DVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  EEKEKNRTPLSDVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120

Query: 121 ISRASKYQASVRKASDRHP------------------------GYLATDSESSDRRVK 154
           I RASKYQ SV KAS+RHP                        GYLATDSESS+RRVK
Sbjct: 121 IYRASKYQPSVWKASERHPGIQIVRSLIDNNLSASLFNFFCSLGYLATDSESSNRRVK 176

[Close]

BLAST of CmaCh04G001190 vs. NCBI nr
Match: gi|359486360|ref|XP_003633434.1| (PREDICTED: uncharacterized protein LOC100253518 [Vitis vinifera])

HSP 1 Score: 156.8 bits (395), Expect = 3.1e-35
Identity = 87/150 (58.00%), Postives = 106/150 (70.67%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTPRQKPKIRVSPPETPISDSVRVISEPAQPK-K 60
           M KSLP  +RLQ+FA+VV S K       +   + RVSPPET      R+ SE  + K +
Sbjct: 1   MGKSLPTTTRLQEFARVVTSEKFQSPKHAKPISRNRVSPPETTKLRGARLGSERVRLKME 60

Query: 61  NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120
           + E + R+PLA VVSDCAKRWFQDTLKEA AGDT MQVLVGQM+ SGYGV +D +KG AW
Sbjct: 61  SSEGQRRMPLAQVVSDCAKRWFQDTLKEAKAGDTTMQVLVGQMYFSGYGVSRDAQKGRAW 120

Query: 121 ISRASKYQASVRKASDRHPGYLATDSESSD 150
           ISRASK ++S  K  D+HPGY A+DS+S D
Sbjct: 121 ISRASKSRSSALKVGDKHPGYNASDSDSDD 150

The following BLAST results are available for this feature:

BLAST of CmaCh04G001190 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh04G001190 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM25_CUCSA	7.2e-55	78.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218760 PE=4 SV=1	[more]
F6HC95_VITVI	2.2e-35	58.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02170 PE=4 SV=...	[more]
M5X2M1_PRUPE	5.3e-34	54.30	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012708mg PE=4 SV=1	[more]
A0A059A9L5_EUCGR	4.2e-31	52.05	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00156 PE=4 SV=1	[more]
A0A0J8CYL8_BETVU	9.4e-31	50.97	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g029590 PE=4 S...	[more]

BLAST of CmaCh04G001190 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G05360.1	2.7e-29	46.20	unknown protein	[more]
AT2G38450.1	1.1e-25	44.00	Sel1-like (InterPro:IPR006597)	[more]

BLAST of CmaCh04G001190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457439\|ref\|XP_004146456.1\|	1.0e-54	78.57	PREDICTED: uncharacterized protein LOC101213931 isoform X2 [Cucumis sativus]	[more]
gi\|659114090\|ref\|XP_008456900.1\|	1.3e-52	75.97	PREDICTED: uncharacterized protein LOC103496713 isoform X2 [Cucumis melo]	[more]
gi\|449457437\|ref\|XP_004146455.1\|	1.2e-50	67.98	PREDICTED: uncharacterized protein LOC101213931 isoform X1 [Cucumis sativus]	[more]
gi\|659114088\|ref\|XP_008456899.1\|	1.4e-48	65.73	PREDICTED: uncharacterized protein LOC103496713 isoform X1 [Cucumis melo]	[more]
gi\|359486360\|ref\|XP_003633434.1\|	3.1e-35	58.00	PREDICTED: uncharacterized protein LOC100253518 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G001190.1	CmaCh04G001190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 85..125 score: 2.
None	No IPR available	PANTHER	PTHR36792	FAMILY NOT NAMED	coord: 61..151 score: 3.1
None	No IPR available	PANTHER	PTHR36792:SF2	SUBFAMILY NOT NAMED	coord: 61..151 score: 3.1
None	No IPR available	unknown	SSF81901	HCP-like	coord: 80..125 score: 9.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G001190	Cucsa.144200	Cucumber (Gy14) v1	cgycmaB0401
CmaCh04G001190	Cla007261	Watermelon (97103) v1	cmawmB691
CmaCh04G001190	Cla018023	Watermelon (97103) v1	cmawmB663
CmaCh04G001190	Csa5G218760	Cucumber (Chinese Long) v2	cmacuB747
CmaCh04G001190	MELO3C020102	Melon (DHL92) v3.5.1	cmameB643
CmaCh04G001190	MELO3C009130	Melon (DHL92) v3.5.1	cmameB688
CmaCh04G001190	ClCG07G004760	Watermelon (Charleston Gray)	cmawcgB674
CmaCh04G001190	ClCG10G022470	Watermelon (Charleston Gray)	cmawcgB617
CmaCh04G001190	CSPI05G11270	Wild cucumber (PI 183967)	cmacpiB757
CmaCh04G001190	CSPI03G30920	Wild cucumber (PI 183967)	cmacpiB708
CmaCh04G001190	CmoCh04G001150	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G001190	CmoCh06G002000	Cucurbita moschata (Rifu)	cmacmoB751
CmaCh04G001190	CmoCh14G000310	Cucurbita moschata (Rifu)	cmacmoB683
CmaCh04G001190	CmoCh04G011510	Cucurbita moschata (Rifu)	cmacmoB730
CmaCh04G001190	Lsi04G010460	Bottle gourd (USVL1VR-Ls)	cmalsiB671
CmaCh04G001190	Cp4.1LG01g05740	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G001190	Cp4.1LG01g11640	Cucurbita pepo (Zucchini)	cmacpeB722
CmaCh04G001190	Cp4.1LG03g03240	Cucurbita pepo (Zucchini)	cmacpeB746
CmaCh04G001190	Cp4.1LG08g12530	Cucurbita pepo (Zucchini)	cmacpeB758
CmaCh04G001190	MELO3C009130.2	Melon (DHL92) v3.6.1	cmamedB774
CmaCh04G001190	MELO3C020102.2	Melon (DHL92) v3.6.1	cmamedB743
CmaCh04G001190	CsaV3_5G010680	Cucumber (Chinese Long) v3	cmacucB0883
CmaCh04G001190	Cla97C07G133190	Watermelon (97103) v2	cmawmbB781
CmaCh04G001190	CsGy5G008550	Cucumber (Gy14) v2	cgybcmaB674
CmaCh04G001190	Carg00186	Silver-seed gourd	carcmaB0949
CmaCh04G001190	Carg24488	Silver-seed gourd	carcmaB1249
CmaCh04G001190	Carg12451	Silver-seed gourd	carcmaB1385
CmaCh04G001190	Carg01128	Silver-seed gourd	carcmaB0214

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G001190	CmaCh14G000340	Cucurbita maxima (Rimu)	cmacmaB274
CmaCh04G001190	CmaCh04G010860	Cucurbita maxima (Rimu)	cmacmaB531
CmaCh04G001190	CmaCh06G002080	Cucurbita maxima (Rimu)	cmacmaB543

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G001190	Watermelon (97103) v1	cmawmB742
CmaCh04G001190	Bottle gourd (USVL1VR-Ls)	cmalsiB660
CmaCh04G001190	Cucumber (Gy14) v2	cgybcmaB842
CmaCh04G001190	Cucumber (Chinese Long) v3	cmacucB0913
CmaCh04G001190	Watermelon (97103) v2	cmawmbB729
CmaCh04G001190	Wax gourd	cmawgoB0865
CmaCh04G001190	Wax gourd	cmawgoB0890
CmaCh04G001190	Cucurbita maxima (Rimu)	cmacmaB534
CmaCh04G001190	Cucurbita moschata (Rifu)	cmacmoB736
CmaCh04G001190	Wild cucumber (PI 183967)	cmacpiB784
CmaCh04G001190	Cucumber (Chinese Long) v2	cmacuB774
CmaCh04G001190	Watermelon (Charleston Gray)	cmawcgB625