Cla007261 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla007261
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown Protein (AHRD V1)
Location	Chr7 : 5816744 .. 5818341 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAATCGCTTCCATCGCCGACTCGCCTTCAGCAATTCGCCAAGGTCGTCGTCTCCTCCAAGAAGCCTCAATCAGCCACATCTAACCCCAAGTCTCGGATCCGCGTTTCGCCGCCCGAAACTCCGATACCGGGTGCCGTCCGAGTCATCTCGGAGCCGAAGAAGAAGAAAAACATGGCGGAGGAGGAGAAGAATCGGACTCCATTAGCCGATGTGGTTTCGGATTGCGTCAAGCGGTGGTTTCAGGACACGCTCAAGGAGGCCAGAGCCGGCGATACGGCTATGCAGGTCTTGGTTGGCCAGATGTTTTGCTCCGGCTATGGAGTTCCTAAGGACACTCAGAAGGTTTGCGTTTTTTTTTACTTTCTACATTTCGAGACTTCGTGTTGATTTCTTGCGGGAGTATTTGGGGAATTAGAGTGGATATTCTTGTACAATTTGAGAGGGAAAACAAAACGAGTTGTAGAATACTTCTAGGTTAAGAGAATGTTGTTAATTTTGGGATGAAGTTCATTCCAGAATTCCATCCTTTTTGTGTGTATTTTGAGCTGCTTACTGCTAAGGTTATTATAGGTTGCGTTGTGTTTATCAATGATGAAGAAGGTTCTCTTTCTCCTCTCCTATTGAGATAGGGAGGGGCCCTTTGGTGTGGTTTGGTCTTTGCTTCTAGTTCGCGGAATATTTGGCTTGAGAGAAATAAGAGTTGAGAGTCCTGAGTAGGTGTGAAATTTGGTTACATTTTTTGAAATGGTTAATGTTCGAATCACTTTTGAAACATGCTTTTAGTCATTCAAACTCAGTTTCAATGGTATGGAAAACCTATTTAAAAGTATAAAATTAAAATCAAACATTAAATCAATTTTGAATGATTAAGGCATGATTCAAAGAATGGGAATGATTTTGAACATGACATAGTGATTTTGGCCATTTTTAATTCAGTCCCAAACATGCCCTTAAGAGTCCTATAATGATAACAATCGTTTTCTTCTTAGCTAGAGTTCTTTTGTGGCATGGTTTTCTCTCCCTTTTCAACACTACTGCATGAATTTAGTAGAATCACTTTTTAATCGATAAACTTTTCTATAGAGAAAAATGTGATAGTAGTAAGGGATATGTTGGGAATACTAGTAGGATAGTAATAAGGGAATAGGGGTAATTAGTTAGTGGTGTCTAATAAGGGAGTTGAACCCCTTATAAGGGAGAAAGATTTTGGGATTTCTCCAGCGTGGGACTTTGGGAGAGACATAATGTTCTTGAAAAGCTATCGATATTTTAATTCCTCTTGGTATTGCAATATAGTTCTATCTTATTGTTTTCTATTGTGTTCCTTGTTGGGAGAATCCTAACAAAAACAAATCCTGCCCTCTTGCTAAATAATTGTTTGATTTCTGAACCAAGGGACTTGCTTGGATCAATAGAGGTTCAAAAAGTCAGCCTTGGAAAGTAAGCGATAGACATCCAGGTATTCCGGTTCCACAGAGTCTGTTTGGCAATAATCTTTCAGCATTGGTTTCTAACATTTTTGTTCTTTAGGTTATCTTGCAACCGATTCAGAATCAAGCGATAGGAGAGTGAAACGAGATGATGTCAGATAA

mRNA sequence

ATGGCAAAATCGCTTCCATCGCCGACTCGCCTTCAGCAATTCGCCAAGGTCGTCGTCTCCTCCAAGAAGCCTCAATCAGCCACATCTAACCCCAAGTCTCGGATCCGCGTTTCGCCGCCCGAAACTCCGATACCGGGTGCCGTCCGAGTCATCTCGGAGCCGAAGAAGAAGAAAAACATGGCGGAGGAGGAGAAGAATCGGACTCCATTAGCCGATGTGGTTTCGGATTGCGTCAAGCGGTGGTTTCAGGACACGCTCAAGGAGGCCAGAGCCGGCGATACGGCTATGCAGGTCTTGGTTGGCCAGATGTTTTGCTCCGGCTATGGAGTTCCTAAGGACACTCAGAAGGGACTTGCTTGGATCAATAGAGGTTCAAAAAGTCAGCCTTGGAAAGTAAGCGATAGACATCCAGGTTATCTTGCAACCGATTCAGAATCAAGCGATAGGAGAGTGAAACGAGATGATGTCAGATAA

Coding sequence (CDS)

ATGGCAAAATCGCTTCCATCGCCGACTCGCCTTCAGCAATTCGCCAAGGTCGTCGTCTCCTCCAAGAAGCCTCAATCAGCCACATCTAACCCCAAGTCTCGGATCCGCGTTTCGCCGCCCGAAACTCCGATACCGGGTGCCGTCCGAGTCATCTCGGAGCCGAAGAAGAAGAAAAACATGGCGGAGGAGGAGAAGAATCGGACTCCATTAGCCGATGTGGTTTCGGATTGCGTCAAGCGGTGGTTTCAGGACACGCTCAAGGAGGCCAGAGCCGGCGATACGGCTATGCAGGTCTTGGTTGGCCAGATGTTTTGCTCCGGCTATGGAGTTCCTAAGGACACTCAGAAGGGACTTGCTTGGATCAATAGAGGTTCAAAAAGTCAGCCTTGGAAAGTAAGCGATAGACATCCAGGTTATCTTGCAACCGATTCAGAATCAAGCGATAGGAGAGTGAAACGAGATGATGTCAGATAA

Protein sequence

MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLVGQMFCSGYGVPKDTQKGLAWINRGSKSQPWKVSDRHPGYLATDSESSDRRVKRDDVR

Homology

[Close]

BLAST of Cla007261 vs. TrEMBL
Match: A0A0A0KM25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218760 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 6.6e-64
Identity = 129/159 (81.13%), Postives = 136/159 (85.53%), Query Frame = 1


Query: 1   MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNM 60
           MAKSLPSP R QQFAK+V SSK PQS     KSRIR SP ETPI G+VRVISEP K K M
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPK--KSRIRASPSETPISGSVRVISEPNKNKYM 60

Query: 61  AEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLVGQMFCSGYGVPKDTQKGLAW 120
            EEEKNRTPLADVVSDCVKRWFQDTLKEA+AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120

Query: 121 INRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR 158
           I R SK Q   WK SDRHPGYLATDSESSDRRVKRD+VR
Sbjct: 121 IYRASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 157

[Close]

BLAST of Cla007261 vs. TrEMBL
Match: F6HC95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02170 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.5e-39
Identity = 92/157 (58.60%), Postives = 110/157 (70.06%), Query Frame = 1


Query: 1   MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNM 60
           M KSLP+ TRLQ+FA+VV S K      + P SR RVSPPET      R+ SE  + K  
Sbjct: 1   MGKSLPTTTRLQEFARVVTSEKFQSPKHAKPISRNRVSPPETTKLRGARLGSERVRLKME 60

Query: 61  AEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLVGQMFCSGYGVPKDTQKGLAW 120
           + E + R PLA VVSDC KRWFQDTLKEA+AGDT MQVLVGQM+ SGYGV +D QKG AW
Sbjct: 61  SSEGQRRMPLAQVVSDCAKRWFQDTLKEAKAGDTTMQVLVGQMYFSGYGVSRDAQKGRAW 120

Query: 121 INRGSKSQ--PWKVSDRHPGYLATDSESSDRRVKRDD 156
           I+R SKS+    KV D+HPGY A+DS+S D  +K D+
Sbjct: 121 ISRASKSRSSALKVGDKHPGYNASDSDSDD--LKNDE 155

[Close]

BLAST of Cla007261 vs. TrEMBL
Match: A0A059A9L5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00156 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-37
Identity = 94/167 (56.29%), Postives = 112/167 (67.07%), Query Frame = 1


Query: 1   MAKSLPSPTRLQQFAKVVVSSKK---PQSATSNPKSRIRVSPPETPIPGAVR-------- 60
           M KS+PS TRLQ FA+ V SS K   P+ A   P SRIRVS PET  PG           
Sbjct: 1   MGKSIPSATRLQDFARAVSSSDKLRLPKQA--KPISRIRVSTPETSRPGGSGGGGGGGGG 60

Query: 61  VISEPKKK------KNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLVGQM 120
           V ++PKKK      K++  E   R PLA VVSDC +RWFQDTL+EA+AGD AMQVLVGQM
Sbjct: 61  VRTDPKKKMEVGRAKSLELERNTRLPLAQVVSDCARRWFQDTLREAKAGDGAMQVLVGQM 120

Query: 121 FCSGYGVPKDTQKGLAWINRGSK--SQPWKVSDRHPGYLATDSESSD 149
           + SGYGVP+D QKG AWIN+ SK  S  W+VSD+ PGY A+DS+S +
Sbjct: 121 YNSGYGVPRDPQKGRAWINKASKARSSVWRVSDKQPGYNASDSDSGE 165

[Close]

BLAST of Cla007261 vs. TrEMBL
Match: M5X2M1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012708mg PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.6e-36
Identity = 82/151 (54.30%), Postives = 109/151 (72.19%), Query Frame = 1


Query: 1   MAKSLPSPTRLQQFAKVVVSSKKP-QSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKN 60
           M K+LP+ TR Q+F +VV + K P +   +   S++R+SPP+ P   + RV  E  K K 
Sbjct: 1   MGKALPTATRFQEFTRVVSADKLPGRPRRTKQVSQVRISPPQAPKSESFRVDPERIKLKM 60

Query: 61  MAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLVGQMFCSGYGVPKDTQKGLA 120
            + E ++R PLA VVSDCVKRWFQDTLKEA+AGD++MQVLVGQM+ SGYGV +D +KG A
Sbjct: 61  ESSEGQSRVPLARVVSDCVKRWFQDTLKEAKAGDSSMQVLVGQMYYSGYGVSRDAKKGQA 120

Query: 121 WINRGSKSQP--WKVSDRHPGYLATDSESSD 149
           W+NR SKS+   WKVS++ PGY A+DS S +
Sbjct: 121 WMNRASKSRTSVWKVSNKPPGYNASDSNSDE 151

[Close]

BLAST of Cla007261 vs. TrEMBL
Match: A0A0V0HET3_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.5e-35
Identity = 86/170 (50.59%), Postives = 106/170 (62.35%), Query Frame = 1


Query: 1   MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEP------ 60
           M KSLPSP R+Q FA+++ S++  +     P SRIR  P  +P+    R + +       
Sbjct: 1   MGKSLPSPNRIQDFARIISSNRIQRPTQVKPASRIRSVP--SPVAAKSRAVVDGDSSERR 60

Query: 61  -KKKKNMAEEEKN-------------RTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV 120
            K KK+M E   N             R PLADVV+DCVKRWF DTLKEA+AGD  MQVLV
Sbjct: 61  LKLKKSMEEASSNSNSNSNTSSSNQRRLPLADVVADCVKRWFHDTLKEAKAGDANMQVLV 120

Query: 121 GQMFCSGYGVPKDTQKGLAWINRGSKSQ--PWKVSDRHPGYLATDSESSD 149
           GQM+ SGYG+ KD QKG AWI R SKS+   WKVSD+ PGY A+DS+S D
Sbjct: 121 GQMYFSGYGISKDAQKGRAWITRASKSRSSAWKVSDKRPGYNASDSDSDD 168

[Close]

BLAST of Cla007261 vs. NCBI nr
Match: gi|449457439|ref|XP_004146456.1| (PREDICTED: uncharacterized protein LOC101213931 isoform X2 [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 9.5e-64
Identity = 129/159 (81.13%), Postives = 136/159 (85.53%), Query Frame = 1


Query: 1   MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNM 60
           MAKSLPSP R QQFAK+V SSK PQS     KSRIR SP ETPI G+VRVISEP K K M
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPK--KSRIRASPSETPISGSVRVISEPNKNKYM 60

Query: 61  AEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLVGQMFCSGYGVPKDTQKGLAW 120
            EEEKNRTPLADVVSDCVKRWFQDTLKEA+AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120

Query: 121 INRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR 158
           I R SK Q   WK SDRHPGYLATDSESSDRRVKRD+VR
Sbjct: 121 IYRASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 157

[Close]

BLAST of Cla007261 vs. NCBI nr
Match: gi|659114090|ref|XP_008456900.1| (PREDICTED: uncharacterized protein LOC103496713 isoform X2 [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 4.0e-62
Identity = 125/159 (78.62%), Postives = 136/159 (85.53%), Query Frame = 1


Query: 1   MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNM 60
           MAKSLPSPTR QQFAK+V SSK PQS     KSRIR SP ETPI G+VRVI EP K K M
Sbjct: 1   MAKSLPSPTRFQQFAKLVFSSKNPQSPPK--KSRIRASPSETPISGSVRVILEPNKNKYM 60

Query: 61  AEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLVGQMFCSGYGVPKDTQKGLAW 120
            E+EKNRTPL+DVVSDCVKRWFQDTLKEA+AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  EEKEKNRTPLSDVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120

Query: 121 INRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR 158
           I R SK QP  WK S+RHPGYLATDSESS+RRVKR+D R
Sbjct: 121 IYRASKYQPSVWKASERHPGYLATDSESSNRRVKRNDFR 157

[Close]

BLAST of Cla007261 vs. NCBI nr
Match: gi|449457437|ref|XP_004146455.1| (PREDICTED: uncharacterized protein LOC101213931 isoform X1 [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-59
Identity = 129/183 (70.49%), Postives = 136/183 (74.32%), Query Frame = 1


Query: 1   MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNM 60
           MAKSLPSP R QQFAK+V SSK PQS     KSRIR SP ETPI G+VRVISEP K K M
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPK--KSRIRASPSETPISGSVRVISEPNKNKYM 60

Query: 61  AEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLVGQMFCSGYGVPKDTQKGLAW 120
            EEEKNRTPLADVVSDCVKRWFQDTLKEA+AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120

Query: 121 INRGSKSQP--WKVSDRHP------------------------GYLATDSESSDRRVKRD 158
           I R SK Q   WK SDRHP                        GYLATDSESSDRRVKRD
Sbjct: 121 IYRASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRRVKRD 180

[Close]

BLAST of Cla007261 vs. NCBI nr
Match: gi|659114088|ref|XP_008456899.1| (PREDICTED: uncharacterized protein LOC103496713 isoform X1 [Cucumis melo])

HSP 1 Score: 232.6 bits (592), Expect = 4.6e-58
Identity = 125/183 (68.31%), Postives = 136/183 (74.32%), Query Frame = 1


Query: 1   MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNM 60
           MAKSLPSPTR QQFAK+V SSK PQS     KSRIR SP ETPI G+VRVI EP K K M
Sbjct: 1   MAKSLPSPTRFQQFAKLVFSSKNPQSPPK--KSRIRASPSETPISGSVRVILEPNKNKYM 60

Query: 61  AEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLVGQMFCSGYGVPKDTQKGLAW 120
            E+EKNRTPL+DVVSDCVKRWFQDTLKEA+AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  EEKEKNRTPLSDVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120

Query: 121 INRGSKSQP--WKVSDRHP------------------------GYLATDSESSDRRVKRD 158
           I R SK QP  WK S+RHP                        GYLATDSESS+RRVKR+
Sbjct: 121 IYRASKYQPSVWKASERHPGIQIVRSLIDNNLSASLFNFFCSLGYLATDSESSNRRVKRN 180

[Close]

BLAST of Cla007261 vs. NCBI nr
Match: gi|778701442|ref|XP_011655024.1| (PREDICTED: uncharacterized protein LOC101213931 isoform X3 [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 6.4e-44
Identity = 94/116 (81.03%), Postives = 100/116 (86.21%), Query Frame = 1


Query: 1   MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNM 60
           MAKSLPSP R QQFAK+V SSK PQS     KSRIR SP ETPI G+VRVISEP K K M
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPK--KSRIRASPSETPISGSVRVISEPNKNKYM 60

Query: 61  AEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLVGQMFCSGYGVPKDTQK 117
            EEEKNRTPLADVVSDCVKRWFQDTLKEA+AGDT+MQVLVGQMFCSGYGVPK+T+K
Sbjct: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKK 114

The following BLAST results are available for this feature:

BLAST of Cla007261 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM25_CUCSA	6.6e-64	81.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218760 PE=4 SV=1	[more]
F6HC95_VITVI	2.5e-39	58.60	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02170 PE=4 SV=...	[more]
A0A059A9L5_EUCGR	1.4e-37	56.29	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00156 PE=4 SV=1	[more]
M5X2M1_PRUPE	2.6e-36	54.30	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012708mg PE=4 SV=1	[more]
A0A0V0HET3_SOLCH	6.5e-35	50.59	Putative ovule protein OS=Solanum chacoense PE=4 SV=1	[more]

BLAST of Cla007261 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457439\|ref\|XP_004146456.1\|	9.5e-64	81.13	PREDICTED: uncharacterized protein LOC101213931 isoform X2 [Cucumis sativus]	[more]
gi\|659114090\|ref\|XP_008456900.1\|	4.0e-62	78.62	PREDICTED: uncharacterized protein LOC103496713 isoform X2 [Cucumis melo]	[more]
gi\|449457437\|ref\|XP_004146455.1\|	1.1e-59	70.49	PREDICTED: uncharacterized protein LOC101213931 isoform X1 [Cucumis sativus]	[more]
gi\|659114088\|ref\|XP_008456899.1\|	4.6e-58	68.31	PREDICTED: uncharacterized protein LOC103496713 isoform X1 [Cucumis melo]	[more]
gi\|778701442\|ref\|XP_011655024.1\|	6.4e-44	81.03	PREDICTED: uncharacterized protein LOC101213931 isoform X3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU16304	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU19827	watermelon EST collection version 2.0	transcribed_cluster
WMU29258	watermelon EST collection version 2.0	transcribed_cluster
WMU41285	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla007261	Cla007261.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU19827	WMU19827	transcribed_cluster
WMU29258	WMU29258	transcribed_cluster
WMU16304	WMU16304	transcribed_cluster
WMU41285	WMU41285	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 86..127 score: 8.
None	No IPR available	PANTHER	PTHR36792	FAMILY NOT NAMED	coord: 59..156 score: 6.7
None	No IPR available	PANTHER	PTHR36792:SF2	SUBFAMILY NOT NAMED	coord: 59..156 score: 6.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla007261	Cla97C07G133190	Watermelon (97103) v2	wmwmbB167
Cla007261	Csa5G218760	Cucumber (Chinese Long) v2	cuwmB387
Cla007261	MELO3C020102	Melon (DHL92) v3.5.1	mewmB056
Cla007261	ClCG07G004760	Watermelon (Charleston Gray)	wcgwmB365
Cla007261	CSPI05G11270	Wild cucumber (PI 183967)	cpiwmB395
Cla007261	Cucsa.144200	Cucumber (Gy14) v1	cgywmB253
Cla007261	CmaCh04G001190	Cucurbita maxima (Rimu)	cmawmB691
Cla007261	CmaCh04G010860	Cucurbita maxima (Rimu)	cmawmB690
Cla007261	CmoCh04G001150	Cucurbita moschata (Rifu)	cmowmB685
Cla007261	CmoCh04G011510	Cucurbita moschata (Rifu)	cmowmB684
Cla007261	Lsi04G010460	Bottle gourd (USVL1VR-Ls)	lsiwmB306
Cla007261	Cp4.1LG01g11640	Cucurbita pepo (Zucchini)	cpewmB417
Cla007261	Cp4.1LG01g05740	Cucurbita pepo (Zucchini)	cpewmB418
Cla007261	CsGy5G008550	Cucumber (Gy14) v2	cgybwmB359
Cla007261	MELO3C020102.2	Melon (DHL92) v3.6.1	medwmB053
Cla007261	Carg00186	Silver-seed gourd	carwmB0667
Cla007261	Carg24488	Silver-seed gourd	carwmB0910
Cla007261	CsaV3_5G010680	Cucumber (Chinese Long) v3	cucwmB410

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla007261	Bottle gourd (USVL1VR-Ls)	lsiwmB253
Cla007261	Cucumber (Gy14) v2	cgybwmB455
Cla007261	Cucumber (Chinese Long) v3	cucwmB511
Cla007261	Watermelon (97103) v2	wmwmbB152
Cla007261	Wax gourd	wgowmB328
Cla007261	Wax gourd	wgowmB548
Cla007261	Cucurbita moschata (Rifu)	cmowmB255
Cla007261	Watermelon (Charleston Gray)	wcgwmB094
Cla007261	Cucumber (Chinese Long) v2	cuwmB488