Lsi04G010460 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAAATCGCTTCCATCGCCAACTCGCCTTCAGCAATTCGCCAAGGTCATCGTCTCCTCCAAGAAGCCCCAATCCGCCGCACCTAACCCCAAGTCTCGGATCCGAGTTTCGCCGCCCGAAACTCCGATCTCCGGTACCGTCCGAGTCATCTCGGAGCTGAAGAAGAAGAAGAAAAACATGGAGGAGGAGAAGGAGGAGAAGAATCGGACTCCGTTGGCCGATGTGGTCTCGGACTGCGTCAAGCGGTGGTTTCAGGACACGCTCAAGGAGGCCAGCACCGGCGATACGTCGATGCAGGTCTTGGTAGGCCAGATGTTTTGCTCCGGCTACGGCGTTCCTAAGGACACTCAGAAGGTTTGCTTTCTACATTTTGAGATTTCTTGTTGA ATGGCAAAATCGCTTCCATCGCCAACTCGCCTTCAGCAATTCGCCAAGGTCATCGTCTCCTCCAAGAAGCCCCAATCCGCCGCACCTAACCCCAAGTCTCGGATCCGAGTTTCGCCGCCCGAAACTCCGATCTCCGGTACCGTCCGAGTCATCTCGGAGCTGAAGAAGAAGAAGAAAAACATGGAGGAGGAGAAGGAGGAGAAGAATCGGACTCCGTTGGCCGATGTGGTCTCGGACTGCGTCAAGCGGTGGTTTCAGGACACGCTCAAGGAGGCCAGCACCGGCGATACGTCGATGCAGGTCTTGGTAGGCCAGATGTTTTGCTCCGGCTACGGCGTTCCTAAGGACACTCAGAAGGTTTGCTTTCTACATTTTGAGATTTCTTGTTGA ATGGCAAAATCGCTTCCATCGCCAACTCGCCTTCAGCAATTCGCCAAGGTCATCGTCTCCTCCAAGAAGCCCCAATCCGCCGCACCTAACCCCAAGTCTCGGATCCGAGTTTCGCCGCCCGAAACTCCGATCTCCGGTACCGTCCGAGTCATCTCGGAGCTGAAGAAGAAGAAGAAAAACATGGAGGAGGAGAAGGAGGAGAAGAATCGGACTCCGTTGGCCGATGTGGTCTCGGACTGCGTCAAGCGGTGGTTTCAGGACACGCTCAAGGAGGCCAGCACCGGCGATACGTCGATGCAGGTCTTGGTAGGCCAGATGTTTTGCTCCGGCTACGGCGTTCCTAAGGACACTCAGAAGGTTTGCTTTCTACATTTTGAGATTTCTTGTTGA MAKSLPSPTRLQQFAKVIVSSKKPQSAAPNPKSRIRVSPPETPISGTVRVISELKKKKKNMEEEKEEKNRTPLADVVSDCVKRWFQDTLKEASTGDTSMQVLVGQMFCSGYGVPKDTQKVCFLHFEISC
BLAST of Lsi04G010460 vs. TrEMBL
Match: A0A0A0KM25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218760 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 2.7e-39 Identity = 92/119 (77.31%), Postives = 98/119 (82.35%), Query Frame = 1
BLAST of Lsi04G010460 vs. TrEMBL
Match: F6HC95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02170 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.5e-24 Identity = 69/119 (57.98%), Postives = 79/119 (66.39%), Query Frame = 1
BLAST of Lsi04G010460 vs. TrEMBL
Match: M1BIN7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017898 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 9.4e-24 Identity = 73/143 (51.05%), Postives = 88/143 (61.54%), Query Frame = 1
BLAST of Lsi04G010460 vs. TrEMBL
Match: A0A103Y988_CYNCS (Tetratricopeptide-like helical OS=Cynara cardunculus var. scolymus GN=Ccrd_016856 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 3.6e-23 Identity = 66/125 (52.80%), Postives = 84/125 (67.20%), Query Frame = 1
BLAST of Lsi04G010460 vs. TrEMBL
Match: M1BIN6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017898 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 8.0e-23 Identity = 69/136 (50.74%), Postives = 84/136 (61.76%), Query Frame = 1
BLAST of Lsi04G010460 vs. TAIR10
Match: AT5G05360.1 (AT5G05360.1 unknown protein) HSP 1 Score: 87.0 bits (214), Expect = 9.0e-18 Identity = 54/123 (43.90%), Postives = 67/123 (54.47%), Query Frame = 1
BLAST of Lsi04G010460 vs. TAIR10
Match: AT2G38450.1 (AT2G38450.1 Sel1-like (InterPro:IPR006597)) HSP 1 Score: 75.5 bits (184), Expect = 2.7e-14 Identity = 47/119 (39.50%), Postives = 63/119 (52.94%), Query Frame = 1
BLAST of Lsi04G010460 vs. NCBI nr
Match: gi|449457439|ref|XP_004146456.1| (PREDICTED: uncharacterized protein LOC101213931 isoform X2 [Cucumis sativus]) HSP 1 Score: 169.5 bits (428), Expect = 3.9e-39 Identity = 92/119 (77.31%), Postives = 98/119 (82.35%), Query Frame = 1
BLAST of Lsi04G010460 vs. NCBI nr
Match: gi|778701442|ref|XP_011655024.1| (PREDICTED: uncharacterized protein LOC101213931 isoform X3 [Cucumis sativus]) HSP 1 Score: 169.5 bits (428), Expect = 3.9e-39 Identity = 92/119 (77.31%), Postives = 98/119 (82.35%), Query Frame = 1
BLAST of Lsi04G010460 vs. NCBI nr
Match: gi|449457437|ref|XP_004146455.1| (PREDICTED: uncharacterized protein LOC101213931 isoform X1 [Cucumis sativus]) HSP 1 Score: 169.5 bits (428), Expect = 3.9e-39 Identity = 92/119 (77.31%), Postives = 98/119 (82.35%), Query Frame = 1
BLAST of Lsi04G010460 vs. NCBI nr
Match: gi|659114088|ref|XP_008456899.1| (PREDICTED: uncharacterized protein LOC103496713 isoform X1 [Cucumis melo]) HSP 1 Score: 169.1 bits (427), Expect = 5.1e-39 Identity = 91/119 (76.47%), Postives = 99/119 (83.19%), Query Frame = 1
BLAST of Lsi04G010460 vs. NCBI nr
Match: gi|659114090|ref|XP_008456900.1| (PREDICTED: uncharacterized protein LOC103496713 isoform X2 [Cucumis melo]) HSP 1 Score: 169.1 bits (427), Expect = 5.1e-39 Identity = 91/119 (76.47%), Postives = 99/119 (83.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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