Csa5G218760 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G218760
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative uncharacterized protein TPLa-1; contains IPR011990 (Tetratricopeptide-like helical)
Location	Chr5 : 9783139 .. 9786151 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAATTAAAATTTTCTTCCAAAGGATGAACAAATCTTAACTAAAATCGAAGAGGAAACATAAATCTGCGATTTCGCAAAGGCGAAATTGGGAGTTTCAATTCTCTCCAAAACAACTTTTTGTTGTCTGATGGCAAAATCGCTTCCATCGCCAGCTCGCTTTCAGCAATTCGCTAAGCTTGTCTTCTCCTCCAAAAACCCCCAATCACAACCCAAGAAGTCTCGGATCCGAGCTTCTCCTTCCGAAACTCCGATTTCCGGTTCCGTTCGAGTCATCTCCGAGCCGAATAAGAACAAGTACATGGAGGAGGAGGAGAAGAACCGGACTCCTTTGGCTGATGTGGTTTCGGATTGTGTCAAGCGGTGGTTTCAGGACACGCTCAAGGAGGCCAAAGCCGGGGATACGTCGATGCAAGTCTTGGTTGGCCAGATGTTTTGCTCCGGCTATGGAGTTCCTAAGAACACGAAGAAGGTTTGCGTTTTTTTTATTTTATTTTATCTCTACATTTCGAAATTTCGTGTTCATTTTCTTGCTGAAGTATCTGGGGAATTTGAGAGGAAATACAAAATGAATTTCGATTGGTTCTTGAAGGGTTGTGAAGTACTTCTAGGTTTTAGAGAATGTAGGTAATTTTGGGATGAGGTTCATTGGAGAATTTCATCCTGTTGGTTTGTCTTTTGAGCTTTTTCTAATTGCTAAGGTTATTATGGTTTGTTTTGTGTTGCTTAACGATGAATAAGGTTTTCTTTTGGCTTTCCTATTGAGATAGGGAAAGGCTCATTGGTTTGGTTTTGAATATTGCGCTCGAGAGAAATAAGAGTTGAGAGTCCTTAGTTGGGTGAAATTTGGTTCGCTTTGAACGTCTGTTGTGTTTGTGCCTTGAAGCACATGTTTGGGATTGGTTTTGAAATGTTTACTGTTCAAATCACTCTTAAACATGTTTTAAATTGATTAAAGGCATGCTTTAAGGGATCGGAAGGATTTTGAACCTGACATATTGATTTTGACCATTTCTGAATCACTCCAAAATATGCCCATAAAAGTCCTTTAACAATGTTTTCTTCTTAGCTAGAGTTCTTTTGTGGCATGGTTCTCTTTCCCTTTTCCACACCACTTCATGGAGTTAGTAGAATCACTTTTCAATAGGTAAACATAAACTTTTCTTGAGAGAAAAACGTGAGAGTAGTAGTACGGGATATGTTGGGAATATTAGTGGGATAGTGATAAGGGCATAGGGATAATTAGTTAGTGATGTCTTGGTAATAAGGGAGTTGAGCCCCTTAGAAGGGAGAAAAATTCCGGGTATTGTCCAGTATGCGACTTTGGGAGACACGTAATCCTCTCGAAAAGCTACTGATATTTTGGTTTCTTTTGGCATTGCAATATAGTTCTATCTTTTGTGTTTTCTGTTGTGTTCCTTATTAGGACAATCCTAACAAAAACAAACCCTGTTCTCATCATTAAGTAAATGTCTGATCTCTGAACTAAGGGACTTGCTTGGATCTATCGAGCTTCAAAATATCAGGCATCAGTTTGGAAAGCAAGCGATAGACATCCAGGTATTCAAATTCTACAAAGTTTGATTGGCAATAATCTTTCTACATTGCATTTTTACTTCTTTTGTTCTTTAGGTTATCTTGCAACCGATTCAGAATCAAGCGATAGGAGGGTGAAACGAGATAACGTCAGATGACCCTTTCACTAATCATAGTAAGTTGTGTTTTAAATTCAAACCTTTCTATTATAAGAATTGAATTCCTCATATGGTTTTAATTCACGTATGTGAAATTCAGCATAAACTTGGTTATGAAAAAGAAAAAAGGGAAACAAGTTATCATCTATCATGTTAATTTGTGTAGAAGTAAAAGTTCTTTTGTTTCTCAACTCCTCAGACAGAAAGCTTTTTCATTTATACATAAATATTTCATTGTGGATTGCTTTTATTTAAGTTCTATTGTCCATTATTACCTATGTAATCATAATGACGATTTCAGAAGGAATATAACATTTTTGGTTTATATCCATACTTGCCCTCAAATTTTCAAATTTGTTTCACTTTGGTTCCTAATACTTCTTTAAATCAATGAAATATTCAAAGATACCAAAGGTCCAAAAGGGCCATTTCATAGGGTATACAAAAGATGTTTCCAATTTGCAATAGGAAAAGAAACGGTCGTAGCCAAATTTATCTTAGCACAAAAACAACTTTTTTATCACTTGCAGATAATCATTTTAGTCGCTGAAATTTTGTCGTCTGGTTTTTAAGATAGACGAATAATTTTGAATATGTGTATTAACGTGTGTTGCAGTAGCACCTATTAGTCATGGAAGTAGATTGGAGAAAGTATTTGGTGGAGCTGTGATATTAGTAACTAGTAACAGAATAATTCAAGGGCTTCAAGGGCAACAAATGTTGTCATGCCCTGAGTCATTATATGGTGCCCGTGCCTGCTGCAGGCTTGTTTCTATAGGAAAACTATGAACAAGATATCTTAAGGAGATTGATCAGAGGGTAGTTTTTTTAATCTGACAATATGTGGAGGGAGAAAATCAAACCTTTGACTTCAAGTTGCTAGTATAAGATTTGTGTTAATTGAGTTATGCTCATACCGGCATTAATCATAAGATAGGTAAGTGTATATATTGGTGTTTCAATATTTTGTCAAGTATAAGTGTAATTTTTTGAGAGAGAAGATTTATCCATCTTTTCATCAAGTTATGGACGTAGTTAATTCCCTAATTTGTGTTACTCATTTTTGCAGCTAATAATCCTTGCACTGCCAAAGTTCACAGTCAAATGGGTTTGTGTTTTCTATCATAAGCTTTTGGTCACCCAATGTAATGTATCCTCACCATGTTAATCATATACTGTATTTGGTTGATTAAATTTAGAATGGTGAATGCATTTCCTTCCCAACCGATGGCTTTACTTTTCATGTGACGTTTTTTTGTATAGATATAACAAGCATATGATTTTTTTAAATATTATTACGAATATAACAATGTGTTCCTTT

mRNA sequence

ATGGCAAAATCGCTTCCATCGCCAGCTCGCTTTCAGCAATTCGCTAAGCTTGTCTTCTCCTCCAAAAACCCCCAATCACAACCCAAGAAGTCTCGGATCCGAGCTTCTCCTTCCGAAACTCCGATTTCCGGTTCCGTTCGAGTCATCTCCGAGCCGAATAAGAACAAGTACATGGAGGAGGAGGAGAAGAACCGGACTCCTTTGGCTGATGTGGTTTCGGATTGTGTCAAGCGGTGGTTTCAGGACACGCTCAAGGAGGCCAAAGCCGGGGATACGTCGATGCAAGTCTTGGTTGGCCAGATGTTTTGCTCCGGCTATGGAGTTCCTAAGAACACGAAGAAGGGACTTGCTTGGATCTATCGAGCTTCAAAATATCAGGCATCAGTTTGGAAAGCAAGCGATAGACATCCAGGTTATCTTGCAACCGATTCAGAATCAAGCGATAGGAGGGTGAAACGAGATAACGTCAGATGA

Coding sequence (CDS)

ATGGCAAAATCGCTTCCATCGCCAGCTCGCTTTCAGCAATTCGCTAAGCTTGTCTTCTCCTCCAAAAACCCCCAATCACAACCCAAGAAGTCTCGGATCCGAGCTTCTCCTTCCGAAACTCCGATTTCCGGTTCCGTTCGAGTCATCTCCGAGCCGAATAAGAACAAGTACATGGAGGAGGAGGAGAAGAACCGGACTCCTTTGGCTGATGTGGTTTCGGATTGTGTCAAGCGGTGGTTTCAGGACACGCTCAAGGAGGCCAAAGCCGGGGATACGTCGATGCAAGTCTTGGTTGGCCAGATGTTTTGCTCCGGCTATGGAGTTCCTAAGAACACGAAGAAGGGACTTGCTTGGATCTATCGAGCTTCAAAATATCAGGCATCAGTTTGGAAAGCAAGCGATAGACATCCAGGTTATCTTGCAACCGATTCAGAATCAAGCGATAGGAGGGTGAAACGAGATAACGTCAGATGA

Protein sequence

MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIYRASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR*

Homology

[Close]

BLAST of Csa5G218760 vs. TrEMBL
Match: A0A0A0KM25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218760 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 4.4e-84
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60
           MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120
           EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY
Sbjct: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120

Query: 121 RASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 158
           RASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR
Sbjct: 121 RASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 157

[Close]

BLAST of Csa5G218760 vs. TrEMBL
Match: M5X2M1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012708mg PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.1e-37
Identity = 84/151 (55.63%), Postives = 107/151 (70.86%), Query Frame = 1


Query: 1   MAKSLPSPARFQQFAKLVFSSK---NPQSQPKKSRIRASPSETPISGSVRVISEPNKNKY 60
           M K+LP+  RFQ+F ++V + K    P+   + S++R SP + P S S RV  E  K K 
Sbjct: 1   MGKALPTATRFQEFTRVVSADKLPGRPRRTKQVSQVRISPPQAPKSESFRVDPERIKLKM 60

Query: 61  MEEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLA 120
              E ++R PLA VVSDCVKRWFQDTLKEAKAGD+SMQVLVGQM+ SGYGV ++ KKG A
Sbjct: 61  ESSEGQSRVPLARVVSDCVKRWFQDTLKEAKAGDSSMQVLVGQMYYSGYGVSRDAKKGQA 120

Query: 121 WIYRASKYQASVWKASDRHPGYLATDSESSD 149
           W+ RASK + SVWK S++ PGY A+DS S +
Sbjct: 121 WMNRASKSRTSVWKVSNKPPGYNASDSNSDE 151

[Close]

BLAST of Csa5G218760 vs. TrEMBL
Match: F6HC95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02170 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-35
Identity = 84/150 (56.00%), Postives = 103/150 (68.67%), Query Frame = 1


Query: 1   MAKSLPSPARFQQFAKLVFSSK--NPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYM 60
           M KSLP+  R Q+FA++V S K  +P+     SR R SP ET      R+ SE  + K  
Sbjct: 1   MGKSLPTTTRLQEFARVVTSEKFQSPKHAKPISRNRVSPPETTKLRGARLGSERVRLKME 60

Query: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120
             E + R PLA VVSDC KRWFQDTLKEAKAGDT+MQVLVGQM+ SGYGV ++ +KG AW
Sbjct: 61  SSEGQRRMPLAQVVSDCAKRWFQDTLKEAKAGDTTMQVLVGQMYFSGYGVSRDAQKGRAW 120

Query: 121 IYRASKYQASVWKASDRHPGYLATDSESSD 149
           I RASK ++S  K  D+HPGY A+DS+S D
Sbjct: 121 ISRASKSRSSALKVGDKHPGYNASDSDSDD 150

[Close]

BLAST of Csa5G218760 vs. TrEMBL
Match: A0A0V0HET3_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.5e-35
Identity = 83/170 (48.82%), Postives = 104/170 (61.18%), Query Frame = 1


Query: 1   MAKSLPSPARFQQFAKLVFSSK--NPQSQPKKSRIRASPSETPISGSVRVI--------- 60
           M KSLPSP R Q FA+++ S++   P      SRIR+ PS  P++   R +         
Sbjct: 1   MGKSLPSPNRIQDFARIISSNRIQRPTQVKPASRIRSVPS--PVAAKSRAVVDGDSSERR 60

Query: 61  -----------SEPNKNKYMEEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLV 120
                      S  N N       + R PLADVV+DCVKRWF DTLKEAKAGD +MQVLV
Sbjct: 61  LKLKKSMEEASSNSNSNSNTSSSNQRRLPLADVVADCVKRWFHDTLKEAKAGDANMQVLV 120

Query: 121 GQMFCSGYGVPKNTKKGLAWIYRASKYQASVWKASDRHPGYLATDSESSD 149
           GQM+ SGYG+ K+ +KG AWI RASK ++S WK SD+ PGY A+DS+S D
Sbjct: 121 GQMYFSGYGISKDAQKGRAWITRASKSRSSAWKVSDKRPGYNASDSDSDD 168

[Close]

BLAST of Csa5G218760 vs. TrEMBL
Match: K4C5L7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.2e-34
Identity = 81/170 (47.65%), Postives = 105/170 (61.76%), Query Frame = 1


Query: 1   MAKSLPSPARFQQFAKLVFSSK--NPQSQPKKSRIRASPSETPISGSVRVI--------- 60
           M KSLPSP R Q FA+++ S++  +P      +RIR+ PS  P++   R +         
Sbjct: 1   MGKSLPSPNRIQDFARIINSNRIHHPTQVKPATRIRSVPS--PVAAKSRAVVDGDSSERR 60

Query: 61  -----------SEPNKNKYMEEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLV 120
                      S  N N       + R PLADVV+DCVKRWF DTLKEAKAGD +MQVLV
Sbjct: 61  LKLKKNMEEASSNSNSNSNTSSSNQRRLPLADVVADCVKRWFHDTLKEAKAGDANMQVLV 120

Query: 121 GQMFCSGYGVPKNTKKGLAWIYRASKYQASVWKASDRHPGYLATDSESSD 149
           GQM+ SGYG+ ++ +KG AWI RASK ++S WK SD+ PGY A+DS+S D
Sbjct: 121 GQMYFSGYGIARDAQKGRAWITRASKSRSSAWKVSDKRPGYNASDSDSDD 168

[Close]

BLAST of Csa5G218760 vs. TAIR10
Match: AT5G05360.1 (AT5G05360.1 unknown protein)

HSP 1 Score: 132.1 bits (331), Expect = 3.0e-31
Identity = 73/160 (45.62%), Postives = 95/160 (59.38%), Query Frame = 1


Query: 7   SPARFQQFAKLVFSSKNPQSQPK-----------KSRIRASPSETPISGSVRVI-----S 66
           S  RF +FA +  SS+NP    +           K   R + S    S  V++      S
Sbjct: 4   SMVRFAEFA-IRLSSENPTRPHRPSPSPRNKVFVKKTTRDTTSHLDYSNLVKLEKAGSHS 63

Query: 67  EPNKNKYMEEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPK 126
             N       +  NR PLA VV DCV+RWFQDTLKEAK+GD  MQVLVGQM+CSGYG+PK
Sbjct: 64  GSNPAPASGSDPINRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPK 123

Query: 127 NTKKGLAWIYRASKYQASVWKASDRHPGYLATDSESSDRR 151
           +  KG AWI +AS+ ++S W+ SD+ PGY A+DS+S+D++
Sbjct: 124 DENKGRAWINKASRTRSSAWQVSDKPPGYNASDSDSNDKK 162

[Close]

BLAST of Csa5G218760 vs. TAIR10
Match: AT2G38450.1 (AT2G38450.1 Sel1-like (InterPro:IPR006597))

HSP 1 Score: 119.4 bits (298), Expect = 2.0e-27
Identity = 57/114 (50.00%), Postives = 76/114 (66.67%), Query Frame = 1


Query: 33  IRASPSETPISGSVRVISEPNKNKYMEEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDT 92
           I++S    PIS       + +      E  +   PL+ VVSDC KRWF+DTL+EAKAG+ 
Sbjct: 22  IKSSKPIRPISSMDSSDKDSSSTTTTSETTRRFVPLSSVVSDCAKRWFKDTLEEAKAGNI 81

Query: 93  SMQVLVGQMFCSGYGVPKNTKKGLAWIYRASKYQASVWKASDRHPGYLATDSES 147
           +MQVL+GQM+ SGYGVPK+ +KG  WI +AS+ ++SVWK  D+ PGY A+DS+S
Sbjct: 82  TMQVLLGQMYYSGYGVPKDARKGRLWITKASRVRSSVWKVIDKRPGYNASDSDS 135

[Close]

BLAST of Csa5G218760 vs. NCBI nr
Match: gi|449457439|ref|XP_004146456.1| (PREDICTED: uncharacterized protein LOC101213931 isoform X2 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 6.4e-84
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60
           MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120
           EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY
Sbjct: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120

Query: 121 RASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 158
           RASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR
Sbjct: 121 RASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 157

[Close]

BLAST of Csa5G218760 vs. NCBI nr
Match: gi|449457437|ref|XP_004146455.1| (PREDICTED: uncharacterized protein LOC101213931 isoform X1 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 7.3e-80
Identity = 157/181 (86.74%), Postives = 157/181 (86.74%), Query Frame = 1


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60
           MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120
           EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY
Sbjct: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120

Query: 121 RASKYQASVWKASDRHP------------------------GYLATDSESSDRRVKRDNV 158
           RASKYQASVWKASDRHP                        GYLATDSESSDRRVKRDNV
Sbjct: 121 RASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRRVKRDNV 180

[Close]

BLAST of Csa5G218760 vs. NCBI nr
Match: gi|659114090|ref|XP_008456900.1| (PREDICTED: uncharacterized protein LOC103496713 isoform X2 [Cucumis melo])

HSP 1 Score: 298.5 bits (763), Expect = 6.8e-78
Identity = 146/157 (92.99%), Postives = 152/157 (96.82%), Query Frame = 1


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60
           MAKSLPSP RFQQFAKLVFSSKNPQS PKKSRIRASPSETPISGSVRVI EPNKNKYMEE
Sbjct: 1   MAKSLPSPTRFQQFAKLVFSSKNPQSPPKKSRIRASPSETPISGSVRVILEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120
           +EKNRTPL+DVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY
Sbjct: 61  KEKNRTPLSDVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120

Query: 121 RASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 158
           RASKYQ SVWKAS+RHPGYLATDSESS+RRVKR++ R
Sbjct: 121 RASKYQPSVWKASERHPGYLATDSESSNRRVKRNDFR 157

[Close]

BLAST of Csa5G218760 vs. NCBI nr
Match: gi|659114088|ref|XP_008456899.1| (PREDICTED: uncharacterized protein LOC103496713 isoform X1 [Cucumis melo])

HSP 1 Score: 285.0 bits (728), Expect = 7.8e-74
Identity = 146/181 (80.66%), Postives = 152/181 (83.98%), Query Frame = 1


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60
           MAKSLPSP RFQQFAKLVFSSKNPQS PKKSRIRASPSETPISGSVRVI EPNKNKYMEE
Sbjct: 1   MAKSLPSPTRFQQFAKLVFSSKNPQSPPKKSRIRASPSETPISGSVRVILEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120
           +EKNRTPL+DVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY
Sbjct: 61  KEKNRTPLSDVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAWIY 120

Query: 121 RASKYQASVWKASDRHP------------------------GYLATDSESSDRRVKRDNV 158
           RASKYQ SVWKAS+RHP                        GYLATDSESS+RRVKR++ 
Sbjct: 121 RASKYQPSVWKASERHPGIQIVRSLIDNNLSASLFNFFCSLGYLATDSESSNRRVKRNDF 180

[Close]

BLAST of Csa5G218760 vs. NCBI nr
Match: gi|778701442|ref|XP_011655024.1| (PREDICTED: uncharacterized protein LOC101213931 isoform X3 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 1.8e-57
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1


Query: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60
           MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQPKKSRIRASPSETPISGSVRVISEPNKNKYMEE 60

Query: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKK 115
           EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKK
Sbjct: 61  EEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKK 114

The following BLAST results are available for this feature:

BLAST of Csa5G218760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM25_CUCSA	4.4e-84	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218760 PE=4 SV=1	[more]
M5X2M1_PRUPE	4.1e-37	55.63	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012708mg PE=4 SV=1	[more]
F6HC95_VITVI	1.0e-35	56.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02170 PE=4 SV=...	[more]
A0A0V0HET3_SOLCH	8.5e-35	48.82	Putative ovule protein OS=Solanum chacoense PE=4 SV=1	[more]
K4C5L7_SOLLC	4.2e-34	47.65	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of Csa5G218760 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G05360.1	3.0e-31	45.63	unknown protein	[more]
AT2G38450.1	2.0e-27	50.00	Sel1-like (InterPro:IPR006597)	[more]

BLAST of Csa5G218760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457439\|ref\|XP_004146456.1\|	6.4e-84	100.00	PREDICTED: uncharacterized protein LOC101213931 isoform X2 [Cucumis sativus]	[more]
gi\|449457437\|ref\|XP_004146455.1\|	7.3e-80	86.74	PREDICTED: uncharacterized protein LOC101213931 isoform X1 [Cucumis sativus]	[more]
gi\|659114090\|ref\|XP_008456900.1\|	6.8e-78	92.99	PREDICTED: uncharacterized protein LOC103496713 isoform X2 [Cucumis melo]	[more]
gi\|659114088\|ref\|XP_008456899.1\|	7.8e-74	80.66	PREDICTED: uncharacterized protein LOC103496713 isoform X1 [Cucumis melo]	[more]
gi\|778701442\|ref\|XP_011655024.1\|	1.8e-57	100.00	PREDICTED: uncharacterized protein LOC101213931 isoform X3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU090802	cucumber EST collection version 3.0	transcribed_cluster
CU094546	cucumber EST collection version 3.0	transcribed_cluster
CU094608	cucumber EST collection version 3.0	transcribed_cluster
CU131515	cucumber EST collection version 3.0	transcribed_cluster
CU152290	cucumber EST collection version 3.0	transcribed_cluster
CU173592	cucumber EST collection version 3.0	transcribed_cluster
CU174528	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G218760.2	Csa5G218760.2	mRNA
Csa5G218760.1	Csa5G218760.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU094608	CU094608	transcribed_cluster
CU173592	CU173592	transcribed_cluster
CU174528	CU174528	transcribed_cluster
CU094546	CU094546	transcribed_cluster
CU090802	CU090802	transcribed_cluster
CU152290	CU152290	transcribed_cluster
CU131515	CU131515	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 84..124 score: 4.
None	No IPR available	PANTHER	PTHR36792	FAMILY NOT NAMED	coord: 60..156 score: 2.0
None	No IPR available	PANTHER	PTHR36792:SF2	SUBFAMILY NOT NAMED	coord: 60..156 score: 2.0
None	No IPR available	unknown	SSF81901	HCP-like	coord: 84..125 score: 7.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G218760	Cla007261	Watermelon (97103) v1	cuwmB387
Csa5G218760	MELO3C020102	Melon (DHL92) v3.5.1	cumeB369
Csa5G218760	ClCG07G004760	Watermelon (Charleston Gray)	cuwcgB402
Csa5G218760	Lsi04G010460	Bottle gourd (USVL1VR-Ls)	culsiB369
Csa5G218760	MELO3C020102.2	Melon (DHL92) v3.6.1	cumedB349
Csa5G218760	Cla97C07G133190	Watermelon (97103) v2	cuwmbB392
Csa5G218760	Bhi07G000449	Wax gourd	cuwgoB513
Csa5G218760	CSPI05G11270	Wild cucumber (PI 183967)	cpicuB240
Csa5G218760	Cucsa.144200	Cucumber (Gy14) v1	cgycuB209
Csa5G218760	CmaCh04G001190	Cucurbita maxima (Rimu)	cmacuB747
Csa5G218760	CmaCh04G010860	Cucurbita maxima (Rimu)	cmacuB746
Csa5G218760	CmoCh04G011510	Cucurbita moschata (Rifu)	cmocuB736
Csa5G218760	CmoCh04G001150	Cucurbita moschata (Rifu)	cmocuB737
Csa5G218760	Cp4.1LG01g05740	Cucurbita pepo (Zucchini)	cpecuB438
Csa5G218760	Cp4.1LG01g11640	Cucurbita pepo (Zucchini)	cpecuB437
Csa5G218760	CsGy5G008550	Cucumber (Gy14) v2	cgybcuB224
Csa5G218760	Carg00186	Silver-seed gourd	carcuB0694
Csa5G218760	Carg24488	Silver-seed gourd	carcuB0926

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa5G218760	Watermelon (Charleston Gray)	cuwcgB361
Csa5G218760	Bottle gourd (USVL1VR-Ls)	culsiB361
Csa5G218760	Cucumber (Gy14) v2	cgybcuB277
Csa5G218760	Watermelon (97103) v2	cuwmbB365
Csa5G218760	Cucumber (Chinese Long) v2	cucuB163