Cp4.1LG01g05740 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g05740
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Tetratricopeptide-like helical
Location	Cp4.1LG01 : 567741 .. 569075 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAATCGCTTCCATTGGCGTCTCGCCTTCAACAATTCGCCAAGGTCGTCGTCTCCTCCAAAAAGCCCCAATCACCCACGGCGAGGCAGAAGCCCAAGATCCGAGTTTCGCCGCCTGAAACTCCGATCTCCGATTCCGTCCGAGTCATCTCGGAACCGGCGCAGCCGAAGAAGAACATGGAGGTGAAGAATCGGATTCCGTTGGCCGATGTGGTGTCGGACTGCGCCAAACGGTGGTTCCAGGACACGCTCAAGGAGGCAAATGCCGGCGATACGGCAATGCAGGTCTTGGTAGGGCAGATGTTTTGCTCTGGCTATGGAGTTCCCAAGGACACTCGGAAGGTTTGCTTTTCGTTTTGATTTCTACATTTTGAGTATTCGTGTTGATTTCTTGCGGATGAATAGATTTGGGGAATTAGAGACGATTTTTGTGTGATTTGAGAGGAACCTTGAAGGATTGTTATTATATTTCGGTTAATCTGTTGGTTAAGAGAATGTAGGTTCTTACTGGATTAAGTTCATTCAAGAATTCCATTCAATTAGTGGGTGTATTTTAGTGCTGCTGAGATTATTCTATAGGTTGTATTGTTCGATATTGAATCGAGATTGGGGGAGGCTCTTTAATGGGCATTGTTCTTGCTATTACGTAATTTTTGGCTTGGGAGAAACAAGAGGCCTTTCATGGTGTTTGACTCTAAAGGTTTTGCCTCTTATTCTTTATAATTAGAGTCATTTTTGCCAATACGGACATACCTCAACTAGTTAAGGCAGTTTAAATCCCCACACCCACCTACCATTGAACCAAAATATAACTAGAGTCGTTTTTATGACCAACTTCCTTTCGTAGTACCCTACCCAGGGGAAGTTGAATCCCTACTGCCTCCTTGAAAGAGAGATGTCGTGAACCACTAGACGATGGGGGCATACTTGCCCGACTGCCACAACACTTCTTTTTGTGGTGATTTTTTCTTTACTTTTTCCCATGAACTATCCTGATTTTCAGAATCCCTTTTGAATATATAAATTAAATTTCTCTAGAGGAAAAAGTAATATCATTCTAATGTTTAAATGAATGTTGGGTTTCTGAATTAAGGGGCTTGCTTGGATCAATCGAGCTTCGAAATATCAGGCATCAGTTTGGAAAGCAAGCGATAGACATCCAGGTATTCCAGTCCTCCGCGTAGTCAATTGAGATAGTAATCTTTTCGAATTGCTTCCTAAGTTTTCCAAACTTTTTGTTGTTCTTTAGCTTACTTAGCCACCGATTCGGAATCAAGCGATAGGAGAGTCAAACGAGATGACATCAGACGATCCTTTTCTCAACTTCACTAA

mRNA sequence

ATGGCAAAATCGCTTCCATTGGCGTCTCGCCTTCAACAATTCGCCAAGGTCGTCGTCTCCTCCAAAAAGCCCCAATCACCCACGGCGAGGCAGAAGCCCAAGATCCGAGTTTCGCCGCCTGAAACTCCGATCTCCGATTCCGTCCGAGTCATCTCGGAACCGGCGCAGCCGAAGAAGAACATGGAGGTGAAGAATCGGATTCCGTTGGCCGATGTGGTGTCGGACTGCGCCAAACGGTGGTTCCAGGACACGCTCAAGGAGGCAAATGCCGGCGATACGGCAATGCAGGTCTTGGTAGGGCAGATGTTTTGCTCTGGCTATGGAGTTCCCAAGGACACTCGGAAGGGGCTTGCTTGGATCAATCGAGCTTCGAAATATCAGGCATCAGTTTGGAAAGCAAGCGATAGACATCCAGCTTACTTAGCCACCGATTCGGAATCAAGCGATAGGAGAGTCAAACGAGATGACATCAGACGATCCTTTTCTCAACTTCACTAA

Coding sequence (CDS)

ATGGCAAAATCGCTTCCATTGGCGTCTCGCCTTCAACAATTCGCCAAGGTCGTCGTCTCCTCCAAAAAGCCCCAATCACCCACGGCGAGGCAGAAGCCCAAGATCCGAGTTTCGCCGCCTGAAACTCCGATCTCCGATTCCGTCCGAGTCATCTCGGAACCGGCGCAGCCGAAGAAGAACATGGAGGTGAAGAATCGGATTCCGTTGGCCGATGTGGTGTCGGACTGCGCCAAACGGTGGTTCCAGGACACGCTCAAGGAGGCAAATGCCGGCGATACGGCAATGCAGGTCTTGGTAGGGCAGATGTTTTGCTCTGGCTATGGAGTTCCCAAGGACACTCGGAAGGGGCTTGCTTGGATCAATCGAGCTTCGAAATATCAGGCATCAGTTTGGAAAGCAAGCGATAGACATCCAGCTTACTTAGCCACCGATTCGGAATCAAGCGATAGGAGAGTCAAACGAGATGACATCAGACGATCCTTTTCTCAACTTCACTAA

Protein sequence

MAKSLPLASRLQQFAKVVVSSKKPQSPTARQKPKIRVSPPETPISDSVRVISEPAQPKKNMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAWINRASKYQASVWKASDRHPAYLATDSESSDRRVKRDDIRRSFSQLH

Homology

[Close]

BLAST of Cp4.1LG01g05740 vs. TrEMBL
Match: A0A0A0KM25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218760 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.4e-58
Identity = 124/159 (77.99%), Postives = 134/159 (84.28%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTARQKPKIRVSPPETPISDSVRVISEPAQPK-K 60
           MAKSLP  +R QQFAK+V SSK PQS    +K +IR SP ETPIS SVRVISEP + K  
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQP--KKSRIRASPSETPISGSVRVISEPNKNKYM 60

Query: 61  NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120
             E KNR PLADVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120

Query: 121 INRASKYQASVWKASDRHPAYLATDSESSDRRVKRDDIR 159
           I RASKYQASVWKASDRHP YLATDSESSDRRVKRD++R
Sbjct: 121 IYRASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 157

[Close]

BLAST of Cp4.1LG01g05740 vs. TrEMBL
Match: M5X2M1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012708mg PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.7e-36
Identity = 83/151 (54.97%), Postives = 111/151 (73.51%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPT-ARQKPKIRVSPPETPISDSVRVISEPAQPK- 60
           M K+LP A+R Q+F +VV + K P  P   +Q  ++R+SPP+ P S+S RV  E  + K 
Sbjct: 1   MGKALPTATRFQEFTRVVSADKLPGRPRRTKQVSQVRISPPQAPKSESFRVDPERIKLKM 60

Query: 61  KNMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLA 120
           ++ E ++R+PLA VVSDC KRWFQDTLKEA AGD++MQVLVGQM+ SGYGV +D +KG A
Sbjct: 61  ESSEGQSRVPLARVVSDCVKRWFQDTLKEAKAGDSSMQVLVGQMYYSGYGVSRDAKKGQA 120

Query: 121 WINRASKYQASVWKASDRHPAYLATDSESSD 150
           W+NRASK + SVWK S++ P Y A+DS S +
Sbjct: 121 WMNRASKSRTSVWKVSNKPPGYNASDSNSDE 151

[Close]

BLAST of Cp4.1LG01g05740 vs. TrEMBL
Match: F6HC95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02170 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.3e-35
Identity = 88/157 (56.05%), Postives = 110/157 (70.06%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTARQKPKIRVSPPETPISDSVRVISEPAQPK-K 60
           M KSLP  +RLQ+FA+VV S K      A+   + RVSPPET      R+ SE  + K +
Sbjct: 1   MGKSLPTTTRLQEFARVVTSEKFQSPKHAKPISRNRVSPPETTKLRGARLGSERVRLKME 60

Query: 61  NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120
           + E + R+PLA VVSDCAKRWFQDTLKEA AGDT MQVLVGQM+ SGYGV +D +KG AW
Sbjct: 61  SSEGQRRMPLAQVVSDCAKRWFQDTLKEAKAGDTTMQVLVGQMYFSGYGVSRDAQKGRAW 120

Query: 121 INRASKYQASVWKASDRHPAYLATDSESSDRRVKRDD 157
           I+RASK ++S  K  D+HP Y A+DS+S D  +K D+
Sbjct: 121 ISRASKSRSSALKVGDKHPGYNASDSDSDD--LKNDE 155

[Close]

BLAST of Cp4.1LG01g05740 vs. TrEMBL
Match: A0A059A9L5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00156 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.7e-33
Identity = 89/170 (52.35%), Postives = 109/170 (64.12%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPT-ARQKPKIRVSPPETPI----------SDSVR 60
           M KS+P A+RLQ FA+ V SS K + P  A+   +IRVS PET               VR
Sbjct: 1   MGKSIPSATRLQDFARAVSSSDKLRLPKQAKPISRIRVSTPETSRPGGSGGGGGGGGGVR 60

Query: 61  VISEPAQPKKNMEV----------KNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLV 120
                  PKK MEV            R+PLA VVSDCA+RWFQDTL+EA AGD AMQVLV
Sbjct: 61  T-----DPKKKMEVGRAKSLELERNTRLPLAQVVSDCARRWFQDTLREAKAGDGAMQVLV 120

Query: 121 GQMFCSGYGVPKDTRKGLAWINRASKYQASVWKASDRHPAYLATDSESSD 150
           GQM+ SGYGVP+D +KG AWIN+ASK ++SVW+ SD+ P Y A+DS+S +
Sbjct: 121 GQMYNSGYGVPRDPQKGRAWINKASKARSSVWRVSDKQPGYNASDSDSGE 165

[Close]

BLAST of Cp4.1LG01g05740 vs. TrEMBL
Match: A0A103Y988_CYNCS (Tetratricopeptide-like helical OS=Cynara cardunculus var. scolymus GN=Ccrd_016856 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 9.2e-32
Identity = 73/159 (45.91%), Postives = 105/159 (66.04%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTARQKPKIR----VSPPETPISDSVRVISEPAQ 60
           M KS+P ++RLQ FA+V+ S +  Q      KP       V PPE   S  +R++    Q
Sbjct: 1   MGKSVPSSARLQDFARVITSDRIQQQSKRGPKPVFNRTRVVPPPEPAKSKGIRIVQSEKQ 60

Query: 61  PKK------NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVP 120
            ++      N  +  RIPLA+VV +C++RWFQ+TL++A  GDT+MQVLVGQM+CSGYGV 
Sbjct: 61  QQRVKIMEENSSMDRRIPLAEVVLECSRRWFQETLRDAKTGDTSMQVLVGQMYCSGYGVV 120

Query: 121 KDTRKGLAWINRASKYQASVWKASDRHPAYLATDSESSD 150
           KD +KG AWIN+AS+ ++SVW+  D+ P Y A+DS++ +
Sbjct: 121 KDAQKGQAWINKASRSRSSVWRVGDKRPGYDASDSDTDE 159

[Close]

BLAST of Cp4.1LG01g05740 vs. TAIR10
Match: AT5G05360.1 (AT5G05360.1 unknown protein)

HSP 1 Score: 134.0 bits (336), Expect = 8.2e-32
Identity = 60/100 (60.00%), Postives = 77/100 (77.00%), Query Frame = 1


Query: 52  SEPAQPKKNMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPK 111
           S PA P    +  NR+PLA VV DC +RWFQDTLKEA +GD  MQVLVGQM+CSGYG+PK
Sbjct: 64  SNPA-PASGSDPINRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPK 123

Query: 112 DTRKGLAWINRASKYQASVWKASDRHPAYLATDSESSDRR 152
           D  KG AWIN+AS+ ++S W+ SD+ P Y A+DS+S+D++
Sbjct: 124 DENKGRAWINKASRTRSSAWQVSDKPPGYNASDSDSNDKK 162

[Close]

BLAST of Cp4.1LG01g05740 vs. TAIR10
Match: AT2G38450.1 (AT2G38450.1 Sel1-like (InterPro:IPR006597))

HSP 1 Score: 118.6 bits (296), Expect = 3.6e-27
Identity = 66/150 (44.00%), Postives = 90/150 (60.00%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVV---VSSKKPQSPTARQKPKIRVSPPETPISDSVRVISEPAQP 60
           M KS+P+ + L+  +  V   + S KP  P +      + S   T  S++ R        
Sbjct: 1   MGKSIPVKTGLRGASAAVAGFIKSSKPIRPISSMDSSDKDSSSTTTTSETTRRF------ 60

Query: 61  KKNMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGL 120
                    +PL+ VVSDCAKRWF+DTL+EA AG+  MQVL+GQM+ SGYGVPKD RKG 
Sbjct: 61  ---------VPLSSVVSDCAKRWFKDTLEEAKAGNITMQVLLGQMYYSGYGVPKDARKGR 120

Query: 121 AWINRASKYQASVWKASDRHPAYLATDSES 148
            WI +AS+ ++SVWK  D+ P Y A+DS+S
Sbjct: 121 LWITKASRVRSSVWKVIDKRPGYNASDSDS 135

[Close]

BLAST of Cp4.1LG01g05740 vs. NCBI nr
Match: gi|449457439|ref|XP_004146456.1| (PREDICTED: uncharacterized protein LOC101213931 isoform X2 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 4.8e-58
Identity = 124/159 (77.99%), Postives = 134/159 (84.28%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTARQKPKIRVSPPETPISDSVRVISEPAQPK-K 60
           MAKSLP  +R QQFAK+V SSK PQS    +K +IR SP ETPIS SVRVISEP + K  
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQP--KKSRIRASPSETPISGSVRVISEPNKNKYM 60

Query: 61  NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120
             E KNR PLADVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120

Query: 121 INRASKYQASVWKASDRHPAYLATDSESSDRRVKRDDIR 159
           I RASKYQASVWKASDRHP YLATDSESSDRRVKRD++R
Sbjct: 121 IYRASKYQASVWKASDRHPGYLATDSESSDRRVKRDNVR 157

[Close]

BLAST of Cp4.1LG01g05740 vs. NCBI nr
Match: gi|659114090|ref|XP_008456900.1| (PREDICTED: uncharacterized protein LOC103496713 isoform X2 [Cucumis melo])

HSP 1 Score: 224.6 bits (571), Expect = 1.3e-55
Identity = 120/159 (75.47%), Postives = 132/159 (83.02%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTARQKPKIRVSPPETPISDSVRVISEPAQPKKN 60
           MAKSLP  +R QQFAK+V SSK PQSP   +K +IR SP ETPIS SVRVI EP + K  
Sbjct: 1   MAKSLPSPTRFQQFAKLVFSSKNPQSPP--KKSRIRASPSETPISGSVRVILEPNKNKYM 60

Query: 61  MEV-KNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120
            E  KNR PL+DVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  EEKEKNRTPLSDVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120

Query: 121 INRASKYQASVWKASDRHPAYLATDSESSDRRVKRDDIR 159
           I RASKYQ SVWKAS+RHP YLATDSESS+RRVKR+D R
Sbjct: 121 IYRASKYQPSVWKASERHPGYLATDSESSNRRVKRNDFR 157

[Close]

BLAST of Cp4.1LG01g05740 vs. NCBI nr
Match: gi|449457437|ref|XP_004146455.1| (PREDICTED: uncharacterized protein LOC101213931 isoform X1 [Cucumis sativus])

HSP 1 Score: 219.2 bits (557), Expect = 5.5e-54
Identity = 124/183 (67.76%), Postives = 134/183 (73.22%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTARQKPKIRVSPPETPISDSVRVISEPAQPK-K 60
           MAKSLP  +R QQFAK+V SSK PQS    +K +IR SP ETPIS SVRVISEP + K  
Sbjct: 1   MAKSLPSPARFQQFAKLVFSSKNPQSQP--KKSRIRASPSETPISGSVRVISEPNKNKYM 60

Query: 61  NMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120
             E KNR PLADVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  EEEEKNRTPLADVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120

Query: 121 INRASKYQASVWKASDRHP------------------------AYLATDSESSDRRVKRD 159
           I RASKYQASVWKASDRHP                         YLATDSESSDRRVKRD
Sbjct: 121 IYRASKYQASVWKASDRHPGIQILQSLIGNNLSTLHFYFFCSLGYLATDSESSDRRVKRD 180

[Close]

BLAST of Cp4.1LG01g05740 vs. NCBI nr
Match: gi|659114088|ref|XP_008456899.1| (PREDICTED: uncharacterized protein LOC103496713 isoform X1 [Cucumis melo])

HSP 1 Score: 211.1 bits (536), Expect = 1.5e-51
Identity = 120/183 (65.57%), Postives = 132/183 (72.13%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPTARQKPKIRVSPPETPISDSVRVISEPAQPKKN 60
           MAKSLP  +R QQFAK+V SSK PQSP   +K +IR SP ETPIS SVRVI EP + K  
Sbjct: 1   MAKSLPSPTRFQQFAKLVFSSKNPQSPP--KKSRIRASPSETPISGSVRVILEPNKNKYM 60

Query: 61  MEV-KNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLAW 120
            E  KNR PL+DVVSDC KRWFQDTLKEA AGDT+MQVLVGQMFCSGYGVPK+T+KGLAW
Sbjct: 61  EEKEKNRTPLSDVVSDCVKRWFQDTLKEAKAGDTSMQVLVGQMFCSGYGVPKNTKKGLAW 120

Query: 121 INRASKYQASVWKASDRHP------------------------AYLATDSESSDRRVKRD 159
           I RASKYQ SVWKAS+RHP                         YLATDSESS+RRVKR+
Sbjct: 121 IYRASKYQPSVWKASERHPGIQIVRSLIDNNLSASLFNFFCSLGYLATDSESSNRRVKRN 180

[Close]

BLAST of Cp4.1LG01g05740 vs. NCBI nr
Match: gi|596009719|ref|XP_007218537.1| (hypothetical protein PRUPE_ppa012708mg [Prunus persica])

HSP 1 Score: 159.1 bits (401), Expect = 6.8e-36
Identity = 83/151 (54.97%), Postives = 111/151 (73.51%), Query Frame = 1


Query: 1   MAKSLPLASRLQQFAKVVVSSKKPQSPT-ARQKPKIRVSPPETPISDSVRVISEPAQPK- 60
           M K+LP A+R Q+F +VV + K P  P   +Q  ++R+SPP+ P S+S RV  E  + K 
Sbjct: 1   MGKALPTATRFQEFTRVVSADKLPGRPRRTKQVSQVRISPPQAPKSESFRVDPERIKLKM 60

Query: 61  KNMEVKNRIPLADVVSDCAKRWFQDTLKEANAGDTAMQVLVGQMFCSGYGVPKDTRKGLA 120
           ++ E ++R+PLA VVSDC KRWFQDTLKEA AGD++MQVLVGQM+ SGYGV +D +KG A
Sbjct: 61  ESSEGQSRVPLARVVSDCVKRWFQDTLKEAKAGDSSMQVLVGQMYYSGYGVSRDAKKGQA 120

Query: 121 WINRASKYQASVWKASDRHPAYLATDSESSD 150
           W+NRASK + SVWK S++ P Y A+DS S +
Sbjct: 121 WMNRASKSRTSVWKVSNKPPGYNASDSNSDE 151

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g05740 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g05740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM25_CUCSA	3.4e-58	77.99	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218760 PE=4 SV=1	[more]
M5X2M1_PRUPE	4.7e-36	54.97	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012708mg PE=4 SV=1	[more]
F6HC95_VITVI	2.3e-35	56.05	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02170 PE=4 SV=...	[more]
A0A059A9L5_EUCGR	3.7e-33	52.35	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00156 PE=4 SV=1	[more]
A0A103Y988_CYNCS	9.2e-32	45.91	Tetratricopeptide-like helical OS=Cynara cardunculus var. scolymus GN=Ccrd_01685...	[more]

BLAST of Cp4.1LG01g05740 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G05360.1	8.2e-32	60.00	unknown protein	[more]
AT2G38450.1	3.6e-27	44.00	Sel1-like (InterPro:IPR006597)	[more]

BLAST of Cp4.1LG01g05740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457439\|ref\|XP_004146456.1\|	4.8e-58	77.99	PREDICTED: uncharacterized protein LOC101213931 isoform X2 [Cucumis sativus]	[more]
gi\|659114090\|ref\|XP_008456900.1\|	1.3e-55	75.47	PREDICTED: uncharacterized protein LOC103496713 isoform X2 [Cucumis melo]	[more]
gi\|449457437\|ref\|XP_004146455.1\|	5.5e-54	67.76	PREDICTED: uncharacterized protein LOC101213931 isoform X1 [Cucumis sativus]	[more]
gi\|659114088\|ref\|XP_008456899.1\|	1.5e-51	65.57	PREDICTED: uncharacterized protein LOC103496713 isoform X1 [Cucumis melo]	[more]
gi\|596009719\|ref\|XP_007218537.1\|	6.8e-36	54.97	hypothetical protein PRUPE_ppa012708mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g05740.1	Cp4.1LG01g05740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 85..125 score: 2.
None	No IPR available	PANTHER	PTHR36792	FAMILY NOT NAMED	coord: 61..160 score: 5.7
None	No IPR available	PANTHER	PTHR36792:SF2	SUBFAMILY NOT NAMED	coord: 61..160 score: 5.7
None	No IPR available	unknown	SSF81901	HCP-like	coord: 79..125 score: 5.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g05740	Cucsa.144200	Cucumber (Gy14) v1	cgycpeB0388
Cp4.1LG01g05740	CmaCh04G001190	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g05740	CmaCh04G010860	Cucurbita maxima (Rimu)	cmacpeB723
Cp4.1LG01g05740	CmoCh04G011510	Cucurbita moschata (Rifu)	cmocpeB675
Cp4.1LG01g05740	CmoCh04G001150	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g05740	Cla007261	Watermelon (97103) v1	cpewmB418
Cp4.1LG01g05740	Csa5G218760	Cucumber (Chinese Long) v2	cpecuB438
Cp4.1LG01g05740	MELO3C020102	Melon (DHL92) v3.5.1	cpemeB366
Cp4.1LG01g05740	ClCG07G004760	Watermelon (Charleston Gray)	cpewcgB410
Cp4.1LG01g05740	CSPI05G11270	Wild cucumber (PI 183967)	cpecpiB438
Cp4.1LG01g05740	Lsi04G010460	Bottle gourd (USVL1VR-Ls)	cpelsiB355
Cp4.1LG01g05740	MELO3C020102.2	Melon (DHL92) v3.6.1	cpemedB442
Cp4.1LG01g05740	MELO3C009130.2	Melon (DHL92) v3.6.1	cpemedB477
Cp4.1LG01g05740	CsaV3_5G010680	Cucumber (Chinese Long) v3	cpecucB0542
Cp4.1LG01g05740	CsGy5G008550	Cucumber (Gy14) v2	cgybcpeB647
Cp4.1LG01g05740	Carg00186	Silver-seed gourd	carcpeB0939
Cp4.1LG01g05740	Carg24488	Silver-seed gourd	carcpeB1258
Cp4.1LG01g05740	Carg12451	Silver-seed gourd	carcpeB1387

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g05740	Cp4.1LG01g11640	Cucurbita pepo (Zucchini)	cpecpeB374

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g05740	Cucurbita pepo (Zucchini)	cpecpeB401
Cp4.1LG01g05740	Wax gourd	cpewgoB0554