CSPI03G30920 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G30920
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Tetratricopeptide-like helical
Location	Chr3 : 28150711 .. 28153895 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGGGTTTCTTATTCTTTATTTTATAAAAAAAAACCCAGCAAGAGGACAACGATTTTCGTACCAGGAAGAAGGAAGGTAAGAAAAACTTCTTCCGTTCTCAATTTCTTATACTAATCCCTTCATACACGACTTCACTTCTCTCAATTTCTTCTCCCTTTTTTTATGAGATTCATTTCCCTTCTTTTAAGTTTTAACCAAATATAGCGTTTCCGGCGCTTCAGAATCTCCCCATATCATAAGGTCAAGGTTTCGGTTCCAGTAATCGAAGCCGTTCAAGTTGTAATACATGGAGATTAGCGGAGCAACAGAGGCCTTGAATCGCGTTCCTTTATCAGAGGTTGTTTCTGATTGCGTCAAAAGATGGTTCAAGGACACTTTGAAGGAAGCCAAAGCTGGCGATATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGGGTTCCTCGAGATGCTCAGAAGGTCAATTTCTTCCCCCATCAATTTATTTAGATCCCATTGCTTTATCAATTCCTCCAAAAATCATGCCTAATTTACTTCACTTCTCGAAAATCTTCCGCTTATGTAGATGTTTTTGGGTATTATTGGTCAACCGTGTGTATCGTATGTACTGTAAAAGTCTGTTATGTTTCGGCTAAAAATAGTTCTCAGTTTTCTCCGTGGTTTTTGGTTCTTTATAATTTCTAGATTTTTTTTTTTGTGAATTTGAGGATGTCTTAAGATCATCAATTGTTCGAGAGTTGGGTTAATGGATTTTTTATAGTTTGTTTACTATTGATTTTAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGATCGTCCGTCTGGAAAGTTAGTGATAAACATCCAGGTTGATTGTTACAATATAAATCTCTTATTTGTTAATGTCTTTTCCTTATCTTATCCATCCTCCTTGAACATCTCTTGCTAATTTCATAAGCTCACATTGATTACAATAGGCTATAATGCCAGTGATTCAGATTCAGATGAATTGACTCGTGATTCTTAACTACTCCAGTGTTGCTGATTTCTCTATGTCATGTCAAAACAACCACTGGTATCTCCTCCACAACATGTCTTTTTAGCAATTTAACTTGTTATTCTTTGTCTTTATGTGTGGCATCAATTATTCTTTCTTGCACACGTGAAAATGCACTAGTAAAAATGATAAAGTTGGCAATATATGACATTTTTGCTCACTGAACAAGTGCTTCGGGATTCAGCTCGAGTGATTAAAGTTTTACAACTATGCTACTATGTGTTTGTGTCATATATAAACACTCGGTGCTTCCTTCTAAACCCTTGGACGCGCCAATCATAATGTTTAGCTTTTTTTCCCTAGATTAGTTATTGTTCTAACCTCCTTGGATGATTTTGGGTGAGGGGATCTTAGATGATTATGCGAATATTAAGTTCATCAAAGTTAATAGTTGTAGGTCATAAACTCTGGCAGCAAAGGATCTTCTACCCTATAGCCTTAGAGGTTATGAGTGCTTTTCAAGATGCTAAACATCCTTTGGGCAATGATGTTATACCATTTGTGCTGAGGATCCTAAAGGATGAATAGGATACACGAATCATAATTTTTAGCTTTGCTTCCCTATATCCAGTTATTGTTCCAACCTCCTTGGGTGATGTTGAGGGAGGGTATCTTAGATGATCATGAATATTAAGTTCATTGAAGTTGATAATTGTTGGTCATAAACTCTGACGACAAAAGGATCTTCTATCTTAGAGCCTTAGAGGTTACGTGTCAGTTGTTTATTGTTCAAGATGCTAAACATCCTTTGGGCATTGATCATGTTATGCAATTTGTGCCGAAGATCCTAAAGGATGTGGATAGGGCACACCAATCTTAACTTTTAGCTTTTCTTTCCTATATCCTGTTATTATTCCGACCTCCTTGGATGATTTTGGGGAGGGATCTTAGATGATTATGAAGATTAAGTTCATTGGAGTTAATTGTTGTAGGTCACAAACTCCGATGACAAAAGGATCTTCTACCTTATTACGTGTCACTTCTTTGTTGTTCAATATGCTAAATATCCTTTGGGTGTTGATCATGTTATGCAATTTGTGCTGACGATCCTAAAGAATGGTTGTTTTATTCTCTAAATACGTTTTCATGTCTTTTTACCAATCCATCTGCTGTTCCTAAGACAACTTAGCCGCATGGTGAAAACATTGCTATGATTTAATATGTTGCAGACCTTCAAATTCACTTATTACAGATGGTAATTTTCTCTTCATATGAATGTGCAATTAGTTGAAATTGTGCTATGGTTGATTCGAAGGATTATAATGTTCACACGATATAAGGATTTCGATATTGCATGGTGGATATTGGAATCAGTTGACTTTAATAATTATGTCTACTCATATTAAGTTATAGATCTTAGGTATTTGTTTCTATACTTCGGCTGGTTAATTGATGATATCTGTTATTTTTTAATATTGTATGAGTACAAATAAAACATGCTGATTGATTGTTAACATTAGTTGTTCCATGAGATTAGTCGAGGAGTGTGAACTAGCCCAGACAATCCCATATTTTTAAAAAATAAAATTGTTGATATTGATGTTGAGCTCTTCTATTTATGGATTTAATGGTGGATATTTTAATTCTGGGTCGATTCTGTGGTTGAAAATGACCTTGCTTGCCCTGTTCTCCTCGAATTGCTTTGCTCAAATAACACTTTTGATCGGGTTTTTATCTCTTGATTTTGTAGGATGTGGTTTTCACTGTGGAAACTCTTCTTGGTCAGCTATCTTTGTAGCTCTACGCATAGTTGCTTCCTGATTGTTGGATTTGAAGGATGTAATATGCTTTGATTTTACCTTTACTCTTCAAGCAATTTATCACACTTTCATGTGGTCTAATTACCTAAATCTTATATTCATTTTTCATTTTCTGTTTAGGTTACCACTTTTTATTGTCTGCAGGAGATTTTCTTTTGATTTTTGCATACATGTCCAAATTTTGAACTTTTTTAGTTGCTATCTCAAATTCTCCTATTAAGCACAGCCTTAAGCCTTTCCAACTATGCTTCTACCTGTCTTCCCTTCTTCCTTCTTGCTACCGTGTAACACCTTTCTTTTATTGTCATTTTCCTTTTCTAGAGAGACAAGATTAGATTAATCACTATATATATGTATATTGCATTTAATTCAAG

mRNA sequence

ATGGAGATTAGCGGAGCAACAGAGGCCTTGAATCGCGTTCCTTTATCAGAGGTTGTTTCTGATTGCGTCAAAAGATGGTTCAAGGACACTTTGAAGGAAGCCAAAGCTGGCGATATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGGGTTCCTCGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGATCGTCCGTCTGGAAAGTTAGTGATAAACATCCAGTGATTCAGATTCAGATGAATTGA

Coding sequence (CDS)

ATGGAGATTAGCGGAGCAACAGAGGCCTTGAATCGCGTTCCTTTATCAGAGGTTGTTTCTGATTGCGTCAAAAGATGGTTCAAGGACACTTTGAAGGAAGCCAAAGCTGGCGATATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGGGTTCCTCGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGATCGTCCGTCTGGAAAGTTAGTGATAAACATCCAGTGATTCAGATTCAGATGAATTGA

Homology

[Close]

BLAST of CSPI03G30920 vs. TrEMBL
Match: A0A0A0LCP0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G730830 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.7e-50
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1


Query: 1   MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60
           MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ
Sbjct: 1   MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60

Query: 61  KGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS 101
           KGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Sbjct: 61  KGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS 100

[Close]

BLAST of CSPI03G30920 vs. TrEMBL
Match: A0A0A0LWU3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G324870 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 6.0e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1


Query: 1  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60
          MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ
Sbjct: 1  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60

Query: 61 KGRIWMTKASRSRSSVWKVSDKHPG 86
          KGRIWMTKASRSRSSVWKVSDKHPG
Sbjct: 61 KGRIWMTKASRSRSSVWKVSDKHPG 85

[Close]

BLAST of CSPI03G30920 vs. TrEMBL
Match: V7AQW5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G062000g PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.3e-41
Identity = 84/100 (84.00%), Postives = 90/100 (90.00%), Query Frame = 1


Query: 1   MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60
           ME S   E  +RVPLSEVV+DCVKRWF+D LKEAKAGDINMQVLVGQMYYSGYGVPRDAQ
Sbjct: 1   MESSVGGERSSRVPLSEVVADCVKRWFRDALKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60

Query: 61  KGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS 101
           KGR+W+TKASR+RSSVWKV DKHPGYNASDSDSDEL  DS
Sbjct: 61  KGRVWLTKASRTRSSVWKVGDKHPGYNASDSDSDELKEDS 100

[Close]

BLAST of CSPI03G30920 vs. TrEMBL
Match: A0A0B0PP79_GOSAR (Putative sel1-like repeat-containing protein L18 OS=Gossypium arboreum GN=F383_10105 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.7e-41
Identity = 86/100 (86.00%), Postives = 92/100 (92.00%), Query Frame = 1


Query: 1   MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60
           ME S A++   R+PLSEVVSDCVKRWFKDTLKEAKAGD+NMQVLVGQMYYSGYGVPRDAQ
Sbjct: 53  MESSSASQ---RLPLSEVVSDCVKRWFKDTLKEAKAGDVNMQVLVGQMYYSGYGVPRDAQ 112

Query: 61  KGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS 101
           KGRIWMT+ASR RSSVWKVSDKHPGYNASDSDSDE+  DS
Sbjct: 113 KGRIWMTRASRLRSSVWKVSDKHPGYNASDSDSDEIKGDS 149

[Close]

BLAST of CSPI03G30920 vs. TrEMBL
Match: A0A059DCN8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00636 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 3.9e-41
Identity = 85/100 (85.00%), Postives = 90/100 (90.00%), Query Frame = 1


Query: 1   MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60
           +E SG  E   RVPLSEVVSDCVKRWFKDTLKEAKAGD+NMQVLVGQMYYSGYGVPRDAQ
Sbjct: 75  VETSGEKEGGARVPLSEVVSDCVKRWFKDTLKEAKAGDVNMQVLVGQMYYSGYGVPRDAQ 134

Query: 61  KGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS 101
           KGRIW+TKASR RSSVWKVSDK PGYNASDSDSDE+  +S
Sbjct: 135 KGRIWITKASRIRSSVWKVSDKRPGYNASDSDSDEIKDNS 174

[Close]

BLAST of CSPI03G30920 vs. TAIR10
Match: AT2G38450.1 (AT2G38450.1 Sel1-like (InterPro:IPR006597))

HSP 1 Score: 147.5 bits (371), Expect = 4.4e-36
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 1


Query: 13  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRS 72
           VPLS VVSDC KRWFKDTL+EAKAG+I MQVL+GQMYYSGYGVP+DA+KGR+W+TKASR 
Sbjct: 55  VPLSSVVSDCAKRWFKDTLEEAKAGNITMQVLLGQMYYSGYGVPKDARKGRLWITKASRV 114

Query: 73  RSSVWKVSDKHPGYNASDSDSD 95
           RSSVWKV DK PGYNASDSDS+
Sbjct: 115 RSSVWKVIDKRPGYNASDSDSE 136

[Close]

BLAST of CSPI03G30920 vs. TAIR10
Match: AT5G05360.1 (AT5G05360.1 unknown protein)

HSP 1 Score: 144.8 bits (364), Expect = 2.8e-35
Identity = 63/92 (68.48%), Postives = 80/92 (86.96%), Query Frame = 1


Query: 4   SGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGR 63
           +  ++ +NRVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR
Sbjct: 69  ASGSDPINRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDENKGR 128

Query: 64  IWMTKASRSRSSVWKVSDKHPGYNASDSDSDE 96
            W+ KASR+RSS W+VSDK PGYNASDSDS++
Sbjct: 129 AWINKASRTRSSAWQVSDKPPGYNASDSDSND 160

[Close]

BLAST of CSPI03G30920 vs. NCBI nr
Match: gi|778683113|ref|XP_011651843.1| (PREDICTED: uncharacterized protein LOC101206121 [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 3.9e-50
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1


Query: 1   MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60
           MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ
Sbjct: 1   MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60

Query: 61  KGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS 101
           KGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Sbjct: 61  KGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS 100

[Close]

BLAST of CSPI03G30920 vs. NCBI nr
Match: gi|659083448|ref|XP_008442362.1| (PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo])

HSP 1 Score: 202.6 bits (514), Expect = 3.3e-49
Identity = 98/100 (98.00%), Postives = 98/100 (98.00%), Query Frame = 1


Query: 1   MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60
           MEISG TE LNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ
Sbjct: 1   MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60

Query: 61  KGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS 101
           KGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Sbjct: 61  KGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS 100

[Close]

BLAST of CSPI03G30920 vs. NCBI nr
Match: gi|700210226|gb|KGN65322.1| (hypothetical protein Csa_1G324870 [Cucumis sativus])

HSP 1 Score: 177.9 bits (450), Expect = 8.6e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1


Query: 1  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60
          MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ
Sbjct: 1  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60

Query: 61 KGRIWMTKASRSRSSVWKVSDKHPG 86
          KGRIWMTKASRSRSSVWKVSDKHPG
Sbjct: 61 KGRIWMTKASRSRSSVWKVSDKHPG 85

[Close]

BLAST of CSPI03G30920 vs. NCBI nr
Match: gi|225439584|ref|XP_002265642.1| (PREDICTED: uncharacterized protein LOC100243041 isoform X1 [Vitis vinifera])

HSP 1 Score: 177.2 bits (448), Expect = 1.5e-41
Identity = 83/100 (83.00%), Postives = 93/100 (93.00%), Query Frame = 1


Query: 1   MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60
           ME S A  + +RVPLSEVVSDCVKRWF+DTL+EAK+GD++MQVLVGQMYYSGYGVPRDAQ
Sbjct: 1   MESSAADRSHHRVPLSEVVSDCVKRWFQDTLREAKSGDVSMQVLVGQMYYSGYGVPRDAQ 60

Query: 61  KGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS 101
           KGR+WMT+ASR+RSSVWKVSDKHPGYNASDSDSDEL  DS
Sbjct: 61  KGRVWMTRASRTRSSVWKVSDKHPGYNASDSDSDELKGDS 100

[Close]

BLAST of CSPI03G30920 vs. NCBI nr
Match: gi|593264878|ref|XP_007134617.1| (hypothetical protein PHAVU_010G062000g [Phaseolus vulgaris])

HSP 1 Score: 176.8 bits (447), Expect = 1.9e-41
Identity = 84/100 (84.00%), Postives = 90/100 (90.00%), Query Frame = 1


Query: 1   MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60
           ME S   E  +RVPLSEVV+DCVKRWF+D LKEAKAGDINMQVLVGQMYYSGYGVPRDAQ
Sbjct: 1   MESSVGGERSSRVPLSEVVADCVKRWFRDALKEAKAGDINMQVLVGQMYYSGYGVPRDAQ 60

Query: 61  KGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS 101
           KGR+W+TKASR+RSSVWKV DKHPGYNASDSDSDEL  DS
Sbjct: 61  KGRVWLTKASRTRSSVWKVGDKHPGYNASDSDSDELKEDS 100

The following BLAST results are available for this feature:

BLAST of CSPI03G30920 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G30920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCP0_CUCSA	2.7e-50	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G730830 PE=4 SV=1	[more]
A0A0A0LWU3_CUCSA	6.0e-42	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G324870 PE=4 SV=1	[more]
V7AQW5_PHAVU	1.3e-41	84.00	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G062000g PE=4 SV=1	[more]
A0A0B0PP79_GOSAR	1.7e-41	86.00	Putative sel1-like repeat-containing protein L18 OS=Gossypium arboreum GN=F383_1...	[more]
A0A059DCN8_EUCGR	3.9e-41	85.00	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00636 PE=4 SV=1	[more]

BLAST of CSPI03G30920 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G38450.1	4.4e-36	82.93	Sel1-like (InterPro:IPR006597)	[more]
AT5G05360.1	2.8e-35	68.48	unknown protein	[more]

BLAST of CSPI03G30920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778683113\|ref\|XP_011651843.1\|	3.9e-50	100.00	PREDICTED: uncharacterized protein LOC101206121 [Cucumis sativus]	[more]
gi\|659083448\|ref\|XP_008442362.1\|	3.3e-49	98.00	PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo]	[more]
gi\|700210226\|gb\|KGN65322.1\|	8.6e-42	100.00	hypothetical protein Csa_1G324870 [Cucumis sativus]	[more]
gi\|225439584\|ref\|XP_002265642.1\|	1.5e-41	83.00	PREDICTED: uncharacterized protein LOC100243041 isoform X1 [Vitis vinifera]	[more]
gi\|593264878\|ref\|XP_007134617.1\|	1.9e-41	84.00	hypothetical protein PHAVU_010G062000g [Phaseolus vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006597	Sel1-like
IPR011990	TPR-like_helical_dom_sf
IPR006597	Sel1-like
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G30920.2	CSPI03G30920.2	mRNA
CSPI03G30920.1	CSPI03G30920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006597	Sel1-like repeat	SMART	SM00671	sel1	coord: 39..74 score: 6.
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 29..73 score: 1.
None	No IPR available	PANTHER	PTHR36792	FAMILY NOT NAMED	coord: 8..84 score: 2.5
None	No IPR available	PANTHER	PTHR36792:SF2	SUBFAMILY NOT NAMED	coord: 8..84 score: 2.5
None	No IPR available	unknown	SSF81901	HCP-like	coord: 31..70 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G30920	Cla018023	Watermelon (97103) v1	cpiwmB199
CSPI03G30920	Csa3G730830	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G30920	MELO3C009130	Melon (DHL92) v3.5.1	cpimeB216
CSPI03G30920	ClCG10G022470	Watermelon (Charleston Gray)	cpiwcgB196
CSPI03G30920	Lsi03G022520	Bottle gourd (USVL1VR-Ls)	cpilsiB185
CSPI03G30920	MELO3C009130.2	Melon (DHL92) v3.6.1	cpimedB210
CSPI03G30920	CsaV3_3G033390	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G30920	Cla97C10G205830	Watermelon (97103) v2	cpiwmbB190
CSPI03G30920	Bhi11G001478	Wax gourd	cpiwgoB219
CSPI03G30920	Cucsa.176750	Cucumber (Gy14) v1	cgycpiB278
CSPI03G30920	CmaCh04G001190	Cucurbita maxima (Rimu)	cmacpiB708
CSPI03G30920	CmaCh14G000340	Cucurbita maxima (Rimu)	cmacpiB242
CSPI03G30920	CmaCh06G002080	Cucurbita maxima (Rimu)	cmacpiB827
CSPI03G30920	CmaCh04G010860	Cucurbita maxima (Rimu)	cmacpiB707
CSPI03G30920	CmoCh06G002000	Cucurbita moschata (Rifu)	cmocpiB815
CSPI03G30920	CmoCh04G011510	Cucurbita moschata (Rifu)	cmocpiB699
CSPI03G30920	CmoCh14G000310	Cucurbita moschata (Rifu)	cmocpiB230
CSPI03G30920	Cp4.1LG08g12530	Cucurbita pepo (Zucchini)	cpecpiB862
CSPI03G30920	Cp4.1LG03g03240	Cucurbita pepo (Zucchini)	cpecpiB600
CSPI03G30920	Cp4.1LG01g11640	Cucurbita pepo (Zucchini)	cpecpiB389
CSPI03G30920	CsGy3G028720	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G30920	Carg12451	Silver-seed gourd	carcpiB1035
CSPI03G30920	Carg01128	Silver-seed gourd	carcpiB0181
CSPI03G30920	Carg00186	Silver-seed gourd	carcpiB0695

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G30920	Cucumber (Chinese Long) v3	cpicucB159
CSPI03G30920	Watermelon (97103) v2	cpiwmbB207
CSPI03G30920	Wax gourd	cpiwgoB331
CSPI03G30920	Wild cucumber (PI 183967)	cpicpiB106
CSPI03G30920	Cucumber (Gy14) v1	cgycpiB182
CSPI03G30920	Cucurbita maxima (Rimu)	cmacpiB665
CSPI03G30920	Cucurbita maxima (Rimu)	cmacpiB872
CSPI03G30920	Cucurbita moschata (Rifu)	cmocpiB452
CSPI03G30920	Cucurbita moschata (Rifu)	cmocpiB657
CSPI03G30920	Cucumber (Chinese Long) v2	cpicuB132
CSPI03G30920	Melon (DHL92) v3.5.1	cpimeB254
CSPI03G30920	Watermelon (Charleston Gray)	cpiwcgB224
CSPI03G30920	Watermelon (97103) v1	cpiwmB266
CSPI03G30920	Cucurbita pepo (Zucchini)	cpecpiB063
CSPI03G30920	Cucurbita pepo (Zucchini)	cpecpiB486
CSPI03G30920	Bottle gourd (USVL1VR-Ls)	cpilsiB168
CSPI03G30920	Melon (DHL92) v3.6.1	cpimedB250
CSPI03G30920	Cucumber (Gy14) v2	cgybcpiB165
CSPI03G30920	Silver-seed gourd	carcpiB0313
CSPI03G30920	Silver-seed gourd	carcpiB0590