CmaCh01G019910 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G019910
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	LYR motif-containing 2
Location	Cma_Chr01 : 12790275 .. 12792706 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGAACAACAGAAATAGTTAACGTCAGATTGAACCAGAAATGGAATTCACTTCAGTTTGATCCACCGTGGGCTTGACGAACAGGTAGTAGCACCACCTATTTGTCCTCTCGGTAAGTCCGTACGTTCTGGAAGAAATTTACGTTTACGTTTTGCCCTAGCTTTTGTTTGATATGATTCTGCTAGAAGATATTCATTTTGTCCAACTAGTCTTCAGAGCCAAGAGATTTCGATTATTTGTTCTATAAATTTCTCCACGTTGGAATTTTACTGGTGGAAGAATTTTGTATACAGTCGAATTGTTCCGCTATATCTAACATTGTAGAAATGTTGTACAGGAAGAGAATTCGCCATGGTTCTCTCCCTCGATTTACAGGAATTTATTCTCCGTGCAAGAGTGTTGAAACTGTACAGGCAGGCTTTAAGAATTGCTCAAAAAGCTCCTGTCCACGCTCGAGGTTAAGCTTTTGATTATGATCTTACAATGAAGTATTGTTTTGATGACGAACATCCACTTTCTATGCATTTTTCTTGTCATGATTTCAGATGTCATTTGAATTCGCCCTGGTTTCATTTCGGATTTCGTTAGTTTTGAAATTGTCTGCTTTGAACAGAGGAATTGAGACTTGCAATCAGACAAGAAATGGAGAACAACCGCGGCTGCAATGAGAGACAGAAAGTAAGGTTTCTGCTCAGTGAAGGAATAGAGAGATTGAAGCGTTTAGAGGAGATGTTGGATATGCAGGGTAACTAATAATGATTGTCATCACCGACATCATTCAGTATTCTTTTCAAATCTCTGTTACTTCAGTATGATATTGATACTCAAAGTTGAACATTGTCTTGATGAAATGATTGGATTCTGAAAACAATAATCTACAGCCGTTTGAATTCCTTGCAAAATTTCAATAACAAAAACAGATCTTTTAATTCCAAAAGCCTGGTCTACATTTTAGTAGAGAACAAAACAAAGAAGCTTAAGAAGAGGTTCAAGAGAACCAAACAGCCCCTTGTAATTTGTCCCCTCCTAATTTTAAGTATCTAATCTAGGAACCTTTTGCCTTCTAATATTGTCGTAGACAGCTCTCCCAGCCCACGCAATTTGCAGCCTCAGGCCAATTCACATAGGATCTTAACAAAATCAAAGCAATGACTCCAGCCATACAAACTGCTGGGTGATACTTATAGTTATCAAATGGGGCTTTAACTTCTTCTTGTGTCGGTCGACACTTTGCCAACGTAACTACAACTTCGAGTATAAAAGAAGCCAGGTACTCTAAAGGGGCCGTGAGGCAAAACCTCTCTCGACCATCTTATCCACCAATTCCTCGTGCTTCTTCAACTGTCCCGCCTTTCGCAGCTGCTGCAGAACCATCTCATAGATGGGCATGCTGGGCTTTAAGCATTTCTCCTCAATCATTTCCCTGAAGAACTTGTAGGCATTGTTCCAATGCCCCATCCCACAATATAACGATATCAGTACTTGGTAAGTATTCAAATTAGGCTCAACTTCTTCTTCTTCCATCTCCTTCTTCAACTTGAAAATCATATCAGCAGATTTCGATTCTGCAAACATCCGCATCAAGATATTGTACGTCACTGTATTTGGCTTACAACCCAGATCCTTCATCCTAGCAAACATCCTATGAACACCATTTACATCATGCGACTTCGCGATACACCTAAATATGGGATTAAAGGTCGACGCATTCGGGGTACAGCCTTTCTTAGCCATAGAGTTGAGGACCTTTGTAGCCTCTCCAAGATTATCATCCTTACAATGAGTCTCAATAAGAAAGTTATAAGTAATTATGTCAGCAGCACAACCCAATCTCTTCATTTGATTGTACACTTGCAAAACCTTCTCTGTTCTACCAGCCTTCACGTGGACTCTTATAAGATTGTTGAATGTAACTGAGTTGGGATTGCAACCAGCATCAACCATCTCAGAGAAAACATCATGGGCACGAGTAATTTGGCCACATCTACACAATGCATCAATCACAATGCTGTAAGTATAAACATTAGGGCTAATACCTGCCATCTTCATCTCTTTAAACACCCTCTCGGCCTCTGAGATATCACCGGCTCGACACCAGCCATGGACCAGGCTAGTGTAAACAATAACATCAGGTTCAAATTTATGTTTCAGATTGTCAAAAAATGACTGGGCTTCAGTTGCCCTTCTCTTCTTGGACAGAATGCTGATAACAATGGAGAAAGCAATCTTGTCAGGATTGCAGCCGTAGTCCTCCATGCGATTAAACGCATGAACCGCCTCCGCCGCCAATCCAGCCCTCACATACCGCCGGACAAGAATCGAGAAGGTTTCAACAGTAATTTCTACATTTCTAGCTTTCATCAGATCAATCAAATGCCACGCTAATCCGAATTGTCTCACCTTACCGGCTAGGTCAATCATCTGGTTGTAGG

mRNA sequence

ACTGAACAACAGAAATAGTTAACGTCAGATTGAACCAGAAATGGAATTCACTTCAGTTTGATCCACCGTGGGCTTGACGAACAGGTAGTAGCACCACCTATTTGTCCTCTCGGAAGAGAATTCGCCATGGTTCTCTCCCTCGATTTACAGGAATTTATTCTCCGTGCAAGAGTGTTGAAACTGTACAGGCAGGCTTTAAGAATTGCTCAAAAAGCTCCTGTCCACGCTCGAGAGGAATTGAGACTTGCAATCAGACAAGAAATGGAGAACAACCGCGGCTGCAATGAGAGACAGAAAGTAAGGTTTCTGCTCAGTGAAGGAATAGAGAGATTGAAGCGTTTAGAGGAGATGTTGGATATGCAGGGTAACTAATAATGATTGTCATCACCGACATCATTCAGTATTCTTTTCAAATCTCTGTTACTTCAGTATGATATTGATACTCAAAGTTGAACATTGTCTTGATGAAATGATTGGATTCTGAAAACAATAATCTACAGCCGTTTGAATTCCTTGCAAAATTTCAATAACAAAAACAGATCTTTTAATTCCAAAAGCCTGGTCTACATTTTAGTAGAGAACAAAACAAAGAAGCTTAAGAAGAGGTTCAAGAGAACCAAACAGCCCCTTGTAATTTGTCCCCTCCTAATTTTAAGTATCTAATCTAGGAACCTTTTGCCTTCTAATATTGTCGTAGACAGCTCTCCCAGCCCACGCAATTTGCAGCCTCAGGCCAATTCACATAGGATCTTAACAAAATCAAAGCAATGACTCCAGCCATACAAACTGCTGGGTGATACTTATAGTTATCAAATGGGGCTTTAACTTCTTCTTGTGTCGGTCGACACTTTGCCAACGTAACTACAACTTCGAGTATAAAAGAAGCCAGGTACTCTAAAGGGGCCGTGAGGCAAAACCTCTCTCGACCATCTTATCCACCAATTCCTCGTGCTTCTTCAACTGTCCCGCCTTTCGCAGCTGCTGCAGAACCATCTCATAGATGGGCATGCTGGGCTTTAAGCATTTCTCCTCAATCATTTCCCTGAAGAACTTGTAGGCATTGTTCCAATGCCCCATCCCACAATATAACGATATCAGTACTTGGTAAGTATTCAAATTAGGCTCAACTTCTTCTTCTTCCATCTCCTTCTTCAACTTGAAAATCATATCAGCAGATTTCGATTCTGCAAACATCCGCATCAAGATATTGTACGTCACTGTATTTGGCTTACAACCCAGATCCTTCATCCTAGCAAACATCCTATGAACACCATTTACATCATGCGACTTCGCGATACACCTAAATATGGGATTAAAGGTCGACGCATTCGGGGTACAGCCTTTCTTAGCCATAGAGTTGAGGACCTTTGTAGCCTCTCCAAGATTATCATCCTTACAATGAGTCTCAATAAGAAAGTTATAAGTAATTATGTCAGCAGCACAACCCAATCTCTTCATTTGATTGTACACTTGCAAAACCTTCTCTGTTCTACCAGCCTTCACGTGGACTCTTATAAGATTGTTGAATGTAACTGAGTTGGGATTGCAACCAGCATCAACCATCTCAGAGAAAACATCATGGGCACGAGTAATTTGGCCACATCTACACAATGCATCAATCACAATGCTGTAAGTATAAACATTAGGGCTAATACCTGCCATCTTCATCTCTTTAAACACCCTCTCGGCCTCTGAGATATCACCGGCTCGACACCAGCCATGGACCAGGATTGCAGCCGTAGTCCTCCATGCGATTAAACGCATGAACCGCCTCCGCCGCCAATCCAGCCCTCACATACCGCCGGACAAGAATCGAGAAGGTCAATCATCTGGTTGTAGG

Coding sequence (CDS)

ATGGTTCTCTCCCTCGATTTACAGGAATTTATTCTCCGTGCAAGAGTGTTGAAACTGTACAGGCAGGCTTTAAGAATTGCTCAAAAAGCTCCTGTCCACGCTCGAGAGGAATTGAGACTTGCAATCAGACAAGAAATGGAGAACAACCGCGGCTGCAATGAGAGACAGAAAGTAAGGTTTCTGCTCAGTGAAGGAATAGAGAGATTGAAGCGTTTAGAGGAGATGTTGGATATGCAGGGTAACTAA

Protein sequence

MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN

Homology

[Close]

BLAST of CmaCh01G019910 vs. TrEMBL
Match: W9RMC8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014312 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 5.9e-24
Identity = 61/81 (75.31%), Postives = 70/81 (86.42%), Query Frame = 1


Query: 1  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRF 60
          M LS DLQ+FILRARVLKLYRQALR  ++APVHAR ELR  IRQEMENNR CN++QK+RF
Sbjct: 1  MALSFDLQDFILRARVLKLYRQALRTTRRAPVHARAELRQTIRQEMENNRNCNDKQKIRF 60

Query: 61 LLSEGIERLKRLEEMLDMQGN 82
           +SEG+ERLK L EMLDMQG+
Sbjct: 61 FISEGLERLKDLGEMLDMQGH 81

[Close]

BLAST of CmaCh01G019910 vs. TrEMBL
Match: M5XJM7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024578mg PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 7.7e-24
Identity = 60/81 (74.07%), Postives = 73/81 (90.12%), Query Frame = 1


Query: 1  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRF 60
          M L+LDLQ+F+LRARVLKLYRQALRI +++PV AR ELR  IRQE+ENNR CN+RQ++RF
Sbjct: 1  MALALDLQDFLLRARVLKLYRQALRITRRSPVDARGELRSTIRQELENNRHCNDRQRIRF 60

Query: 61 LLSEGIERLKRLEEMLDMQGN 82
           LSEG+ERLKRL+EMLDMQG+
Sbjct: 61 FLSEGLERLKRLDEMLDMQGH 81

[Close]

BLAST of CmaCh01G019910 vs. TrEMBL
Match: A0A067KAL8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13091 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.0e-23
Identity = 61/81 (75.31%), Postives = 72/81 (88.89%), Query Frame = 1


Query: 1  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRF 60
          MVLS DLQ+FILRARVLKLYRQALR A++AP HAR +L+  IRQEMENNR C ++Q+VRF
Sbjct: 1  MVLSFDLQDFILRARVLKLYRQALRTARRAPDHARVDLKQIIRQEMENNRNCKDKQRVRF 60

Query: 61 LLSEGIERLKRLEEMLDMQGN 82
          L+SEG+ERLK L+EMLDMQGN
Sbjct: 61 LISEGLERLKGLDEMLDMQGN 81

[Close]

BLAST of CmaCh01G019910 vs. TrEMBL
Match: E0CQW2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00870 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-23
Identity = 59/81 (72.84%), Postives = 72/81 (88.89%), Query Frame = 1


Query: 1   MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRF 60
           MVL LDLQ+F+LRARVLKLYRQALR+A +AP HAR ELR  +RQEMENNR CN++Q++RF
Sbjct: 60  MVLLLDLQDFLLRARVLKLYRQALRVAGRAPEHARAELRQTVRQEMENNRNCNDKQRIRF 119

Query: 61  LLSEGIERLKRLEEMLDMQGN 82
           L+SEG+ RLK L+EMLDMQG+
Sbjct: 120 LISEGLARLKGLDEMLDMQGH 140

[Close]

BLAST of CmaCh01G019910 vs. TrEMBL
Match: A0A103XDE9_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_025992 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.5e-22
Identity = 59/81 (72.84%), Postives = 72/81 (88.89%), Query Frame = 1


Query: 1  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRF 60
          MV+S DLQ FILRARVLKLYRQALRIA++APV +R EL   IRQEMENNR CN++Q++R+
Sbjct: 1  MVVSFDLQTFILRARVLKLYRQALRIAKRAPVPSRGELMQTIRQEMENNRACNDKQRIRY 60

Query: 61 LLSEGIERLKRLEEMLDMQGN 82
          L+SEG+ERLK L+EMLDMQG+
Sbjct: 61 LISEGMERLKGLDEMLDMQGH 81

[Close]

BLAST of CmaCh01G019910 vs. TAIR10
Match: AT1G76065.1 (AT1G76065.1 LYR family of Fe/S cluster biogenesis protein)

HSP 1 Score: 111.7 bits (278), Expect = 2.1e-25
Identity = 55/80 (68.75%), Postives = 70/80 (87.50%), Query Frame = 1


Query: 2  VLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFL 61
          ++ LDLQ FILRARVLKLYRQAL+IA +APVH R EL+  +RQEME NR CN++QK+R+L
Sbjct: 1  MVQLDLQSFILRARVLKLYRQALKIAHRAPVHVRGELKQTVRQEMEKNRDCNDKQKIRYL 60

Query: 62 LSEGIERLKRLEEMLDMQGN 82
          +SEG+ER+K L+EMLDMQG+
Sbjct: 61 ISEGLERIKGLDEMLDMQGH 80

[Close]

BLAST of CmaCh01G019910 vs. NCBI nr
Match: gi|645228886|ref|XP_008221204.1| (PREDICTED: uncharacterized protein LOC103321195 [Prunus mume])

HSP 1 Score: 118.6 bits (296), Expect = 5.0e-24
Identity = 61/81 (75.31%), Postives = 73/81 (90.12%), Query Frame = 1


Query: 1  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRF 60
          M L+LDLQ+F+LRARVLKLYRQALRI ++APV AR ELR  IRQE+ENNR CN+RQ++RF
Sbjct: 1  MALALDLQDFLLRARVLKLYRQALRITRRAPVDARGELRSTIRQELENNRHCNDRQRIRF 60

Query: 61 LLSEGIERLKRLEEMLDMQGN 82
           LSEG+ERLKRL+EMLDMQG+
Sbjct: 61 FLSEGLERLKRLDEMLDMQGH 81

[Close]

BLAST of CmaCh01G019910 vs. NCBI nr
Match: gi|703112453|ref|XP_010100121.1| (hypothetical protein L484_014312 [Morus notabilis])

HSP 1 Score: 117.9 bits (294), Expect = 8.5e-24
Identity = 61/81 (75.31%), Postives = 70/81 (86.42%), Query Frame = 1


Query: 1  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRF 60
          M LS DLQ+FILRARVLKLYRQALR  ++APVHAR ELR  IRQEMENNR CN++QK+RF
Sbjct: 1  MALSFDLQDFILRARVLKLYRQALRTTRRAPVHARAELRQTIRQEMENNRNCNDKQKIRF 60

Query: 61 LLSEGIERLKRLEEMLDMQGN 82
           +SEG+ERLK L EMLDMQG+
Sbjct: 61 FISEGLERLKDLGEMLDMQGH 81

[Close]

BLAST of CmaCh01G019910 vs. NCBI nr
Match: gi|596245317|ref|XP_007224542.1| (hypothetical protein PRUPE_ppa024578mg [Prunus persica])

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-23
Identity = 60/81 (74.07%), Postives = 73/81 (90.12%), Query Frame = 1


Query: 1  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRF 60
          M L+LDLQ+F+LRARVLKLYRQALRI +++PV AR ELR  IRQE+ENNR CN+RQ++RF
Sbjct: 1  MALALDLQDFLLRARVLKLYRQALRITRRSPVDARGELRSTIRQELENNRHCNDRQRIRF 60

Query: 61 LLSEGIERLKRLEEMLDMQGN 82
           LSEG+ERLKRL+EMLDMQG+
Sbjct: 61 FLSEGLERLKRLDEMLDMQGH 81

[Close]

BLAST of CmaCh01G019910 vs. NCBI nr
Match: gi|802633912|ref|XP_012077740.1| (PREDICTED: uncharacterized protein LOC105638528 [Jatropha curcas])

HSP 1 Score: 117.1 bits (292), Expect = 1.4e-23
Identity = 61/81 (75.31%), Postives = 72/81 (88.89%), Query Frame = 1


Query: 1  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRF 60
          MVLS DLQ+FILRARVLKLYRQALR A++AP HAR +L+  IRQEMENNR C ++Q+VRF
Sbjct: 1  MVLSFDLQDFILRARVLKLYRQALRTARRAPDHARVDLKQIIRQEMENNRNCKDKQRVRF 60

Query: 61 LLSEGIERLKRLEEMLDMQGN 82
          L+SEG+ERLK L+EMLDMQGN
Sbjct: 61 LISEGLERLKGLDEMLDMQGN 81

[Close]

BLAST of CmaCh01G019910 vs. NCBI nr
Match: gi|731427839|ref|XP_002285901.2| (PREDICTED: uncharacterized protein LOC100242024 [Vitis vinifera])

HSP 1 Score: 116.7 bits (291), Expect = 1.9e-23
Identity = 59/81 (72.84%), Postives = 72/81 (88.89%), Query Frame = 1


Query: 1   MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRF 60
           MVL LDLQ+F+LRARVLKLYRQALR+A +AP HAR ELR  +RQEMENNR CN++Q++RF
Sbjct: 60  MVLLLDLQDFLLRARVLKLYRQALRVAGRAPEHARAELRQTVRQEMENNRNCNDKQRIRF 119

Query: 61  LLSEGIERLKRLEEMLDMQGN 82
           L+SEG+ RLK L+EMLDMQG+
Sbjct: 120 LISEGLARLKGLDEMLDMQGH 140

The following BLAST results are available for this feature:

BLAST of CmaCh01G019910 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh01G019910 vs. TrEMBL


Match Name	E-value	Identity	Description
W9RMC8_9ROSA	5.9e-24	75.31	Uncharacterized protein OS=Morus notabilis GN=L484_014312 PE=3 SV=1	[more]
M5XJM7_PRUPE	7.7e-24	74.07	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024578mg PE=3 SV=1	[more]
A0A067KAL8_JATCU	1.0e-23	75.31	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13091 PE=3 SV=1	[more]
E0CQW2_VITVI	1.3e-23	72.84	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00870 PE=3 SV=...	[more]
A0A103XDE9_CYNCS	1.5e-22	72.84	Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_025992 PE=3 ...	[more]

BLAST of CmaCh01G019910 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76065.1	2.1e-25	68.75	LYR family of Fe/S cluster biogenesis protein	[more]

BLAST of CmaCh01G019910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|645228886\|ref\|XP_008221204.1\|	5.0e-24	75.31	PREDICTED: uncharacterized protein LOC103321195 [Prunus mume]	[more]
gi\|703112453\|ref\|XP_010100121.1\|	8.5e-24	75.31	hypothetical protein L484_014312 [Morus notabilis]	[more]
gi\|596245317\|ref\|XP_007224542.1\|	1.1e-23	74.07	hypothetical protein PRUPE_ppa024578mg [Prunus persica]	[more]
gi\|802633912\|ref\|XP_012077740.1\|	1.4e-23	75.31	PREDICTED: uncharacterized protein LOC105638528 [Jatropha curcas]	[more]
gi\|731427839\|ref\|XP_002285901.2\|	1.9e-23	72.84	PREDICTED: uncharacterized protein LOC100242024 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008011	Complex1_LYR
IPR026868	Lyrm2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G019910.1	CmaCh01G019910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008011	Complex 1 LYR protein	PFAM	PF05347	Complex1_LYR	coord: 15..70 score: 1.3
IPR026868	LYR motif-containing protein 2	PANTHER	PTHR13675	FAMILY NOT NAMED	coord: 1..81 score: 1.6
None	No IPR available	PANTHER	PTHR13675:SF0	LYR MOTIF-CONTAINING PROTEIN 2	coord: 1..81 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh01G019910	Cucsa.343250	Cucumber (Gy14) v1	cgycmaB0934
CmaCh01G019910	Cla007422	Watermelon (97103) v1	cmawmB444
CmaCh01G019910	Csa3G874410	Cucumber (Chinese Long) v2	cmacuB444
CmaCh01G019910	MELO3C003728	Melon (DHL92) v3.5.1	cmameB424
CmaCh01G019910	ClCG05G015420	Watermelon (Charleston Gray)	cmawcgB415
CmaCh01G019910	CSPI03G43670	Wild cucumber (PI 183967)	cmacpiB447
CmaCh01G019910	CmoCh01G020490	Cucurbita moschata (Rifu)	cmacmoB469
CmaCh01G019910	CmoCh09G000840	Cucurbita moschata (Rifu)	cmacmoB435
CmaCh01G019910	Lsi04G017780	Bottle gourd (USVL1VR-Ls)	cmalsiB424
CmaCh01G019910	Cp4.1LG06g00370	Cucurbita pepo (Zucchini)	cmacpeB507
CmaCh01G019910	MELO3C003728.2	Melon (DHL92) v3.6.1	cmamedB487
CmaCh01G019910	CsaV3_3G046120	Cucumber (Chinese Long) v3	cmacucB0536
CmaCh01G019910	Cla97C05G096470	Watermelon (97103) v2	cmawmbB483
CmaCh01G019910	CsGy3G041190	Cucumber (Gy14) v2	cgybcmaB358
CmaCh01G019910	Carg17217	Silver-seed gourd	carcmaB1293

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh01G019910	CmaCh09G000860	Cucurbita maxima (Rimu)	cmacmaB051

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh01G019910	Cucumber (Gy14) v1	cgycmaB0890
CmaCh01G019910	Watermelon (97103) v1	cmawmB440
CmaCh01G019910	Cucurbita pepo (Zucchini)	cmacpeB490
CmaCh01G019910	Bottle gourd (USVL1VR-Ls)	cmalsiB407
CmaCh01G019910	Bottle gourd (USVL1VR-Ls)	cmalsiB452
CmaCh01G019910	Melon (DHL92) v3.6.1	cmamedB498
CmaCh01G019910	Silver-seed gourd	carcmaB0136
CmaCh01G019910	Silver-seed gourd	carcmaB0187
CmaCh01G019910	Silver-seed gourd	carcmaB0909
CmaCh01G019910	Watermelon (97103) v2	cmawmbB446
CmaCh01G019910	Cucurbita moschata (Rifu)	cmacmoB483
CmaCh01G019910	Cucurbita maxima (Rimu)	cmacmaB427
CmaCh01G019910	Cucurbita maxima (Rimu)	cmacmaB438