Cla97C07G133000 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C07G133000
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	LOB domain-containing protein 12-like
Location	Cla97Chr07 : 5316008 .. 5316947 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGCAATTCACCGTGCGCCTCGTGCAAACTCCTCCGGCGACGGTGCGCCAAAGACTGCATTTTTGCTCCCTATTTTCCCTCTGATGACCCCCACAAGTTTGCTATTGTCCATAAAGTTTTTGGTGCCAGCAATGTCAGCAAAATGTTGCAGGTTCTTCTTCTTTAACCATTTCCCTTGTTATTTTGGGTTTCGGGTTTGTTTGCGTGTATTTTCCAAAAAAGACAATTCATGAATTTATAAAAGAGTTTGTAGGGAACAATTTAACACAAGTTTTCTTTATTATTTTCGTGTTTTTAAAAATTTATTCCTATAAAACACTAATTCCATCTCTAAATTTGTTATTTAATATTAAATTTAAAAACAAGAATAGTTTTTAAACATTTTATACATTTTTAAATTTGATTGAGGCTTAAAAAATATGCAAATCATTAACTATTTTCAAAAACCAAAAATAAAAAACGAAATATTTTCTGAAACCCTTTCTCGAGTTGATTAAACCAACCAGTGGACAAAAAATTCATTTTGTTTTTTTTTAAAGAACAAAAATAATGAATTTTGGTATTGATAAAATTTTTAATTATGGAAACAGGAACTGCCAGTGCAGCAAAGAGGCGACGCCGTGATGAGTTTAGTTTATGAGGCAAGTGCAAGAGTGAGGGACCCAGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAATCAAGTTTCACAACTACAAATGCAATTGGCTGTGGCTCAAGCTGAGATTCTTTGCATCCAAATGCAACAAGACAACCCCGTTTTCCCAAATTGCCCTCAGATCCACTCCGATGACAAACCCTCCTCTCTTCTACTCCCGCCGCCGTCTCCTCCGCCCTCTCAGTGCCTCAATTTTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAA

mRNA sequence

ATGGGTGGCAATTCACCGTGCGCCTCGTGCAAACTCCTCCGGCGACGGTGCGCCAAAGACTGCATTTTTGCTCCCTATTTTCCCTCTGATGACCCCCACAAGTTTGCTATTGTCCATAAAGTTTTTGGTGCCAGCAATGTCAGCAAAATGTTGCAGGAACTGCCAGTGCAGCAAAGAGGCGACGCCGTGATGAGTTTAGTTTATGAGGCAAGTGCAAGAGTGAGGGACCCAGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAATCAAGTTTCACAACTACAAATGCAATTGGCTGTGGCTCAAGCTGAGATTCTTTGCATCCAAATGCAACAAGACAACCCCGTTTTCCCAAATTGCCCTCAGATCCACTCCGATGACAAACCCTCCTCTCTTCTACTCCCGCCGCCGTCTCCTCCGCCCTCTCAGTGCCTCAATTTTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAA

Coding sequence (CDS)

ATGGGTGGCAATTCACCGTGCGCCTCGTGCAAACTCCTCCGGCGACGGTGCGCCAAAGACTGCATTTTTGCTCCCTATTTTCCCTCTGATGACCCCCACAAGTTTGCTATTGTCCATAAAGTTTTTGGTGCCAGCAATGTCAGCAAAATGTTGCAGGAACTGCCAGTGCAGCAAAGAGGCGACGCCGTGATGAGTTTAGTTTATGAGGCAAGTGCAAGAGTGAGGGACCCAGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAATCAAGTTTCACAACTACAAATGCAATTGGCTGTGGCTCAAGCTGAGATTCTTTGCATCCAAATGCAACAAGACAACCCCGTTTTCCCAAATTGCCCTCAGATCCACTCCGATGACAAACCCTCCTCTCTTCTACTCCCGCCGCCGTCTCCTCCGCCCTCTCAGTGCCTCAATTTTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAA

Protein sequence

MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDNPVFPNCPQIHSDDKPSSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS

Homology

[Close]

BLAST of Cla97C07G133000 vs. NCBI nr
Match: XP_022957028.1 (LOB domain-containing protein 12-like [Cucurbita moschata])

HSP 1 Score: 302.0 bits (772), Expect = 1.3e-78
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDNPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQD+PVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKXXXXXXXXXXXXXXQCLNFASSPNVIYDTIFGHDIVS 167
           CPQIHSD+ XXXXXXXXXXXXX QCLNFASSPNVIYD IFGHDIVS
Sbjct: 121 CPQIHSDEXXXXXXXXXXXXXXSQCLNFASSPNVIYDAIFGHDIVS 166

[Close]

BLAST of Cla97C07G133000 vs. NCBI nr
Match: XP_004148190.1 (PREDICTED: LOB domain-containing protein 12-like [Cucumis sativus] >KGN50694.1 hypothetical protein Csa_5G215140 [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 2.8e-78
Identity = 164/167 (98.20%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDNPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQD+PVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKXXXXXXXXXXXXXXQCLNF-ASSPNVIYDTIFGHDIVS 167
           CPQIHSDD XXXXXXXXXXXXXXQCLNF ASSPNVIYDTIFGHDIVS
Sbjct: 121 CPQIHSDDXXXXXXXXXXXXXXXQCLNFAASSPNVIYDTIFGHDIVS 167

[Close]

BLAST of Cla97C07G133000 vs. NCBI nr
Match: XP_023536420.1 (LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.8 bits (769), Expect = 2.8e-78
Identity = 161/166 (96.99%), Postives = 162/166 (97.59%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDNPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQD+PVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKXXXXXXXXXXXXXXQCLNFASSPNVIYDTIFGHDIVS 167
           CPQIHSD  XXXXXXXXXXXXX QCLNFASSPNVIYD IFGHDIVS
Sbjct: 121 CPQIHSDXXXXXXXXXXXXXXXSQCLNFASSPNVIYDAIFGHDIVS 166

[Close]

BLAST of Cla97C07G133000 vs. NCBI nr
Match: XP_022977151.1 (LOB domain-containing protein 12-like [Cucurbita maxima])

HSP 1 Score: 299.7 bits (766), Expect = 6.3e-78
Identity = 159/166 (95.78%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDNPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQ+QVSQLQMQLAVAQAEILCIQMQQD+P+FPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQSQVSQLQMQLAVAQAEILCIQMQQDHPIFPN 120

Query: 121 CPQIHSDDKXXXXXXXXXXXXXXQCLNFASSPNVIYDTIFGHDIVS 167
           CPQIHSD+ XXXXXXXXXXXXX QCLNFASSPNVIYD IFGHDIVS
Sbjct: 121 CPQIHSDEXXXXXXXXXXXXXXSQCLNFASSPNVIYDAIFGHDIVS 166

[Close]

BLAST of Cla97C07G133000 vs. NCBI nr
Match: XP_022146841.1 (LOB domain-containing protein 12-like [Momordica charantia])

HSP 1 Score: 292.7 bits (748), Expect = 7.7e-76
Identity = 147/167 (88.02%), Postives = 150/167 (89.82%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPV QRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVSQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDNPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQD+PVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIH-SDDKXXXXXXXXXXXXXXQCLNFASSPNVIYDTIFGHDIVS 167
           CPQIH S DK              QCLNFA+SPNVIYDT+FGHDIVS
Sbjct: 121 CPQIHYSGDK--------LLPPPSQCLNFANSPNVIYDTVFGHDIVS 159

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BLAST of Cla97C07G133000 vs. TrEMBL
Match: tr|A0A0A0KP74|A0A0A0KP74_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G215140 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.9e-78
Identity = 164/167 (98.20%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDNPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQD+PVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKXXXXXXXXXXXXXXQCLNF-ASSPNVIYDTIFGHDIVS 167
           CPQIHSDD XXXXXXXXXXXXXXQCLNF ASSPNVIYDTIFGHDIVS
Sbjct: 121 CPQIHSDDXXXXXXXXXXXXXXXQCLNFAASSPNVIYDTIFGHDIVS 167

[Close]

BLAST of Cla97C07G133000 vs. TrEMBL
Match: tr|A0A1S3BZ14|A0A1S3BZ14_CUCME (LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103495138 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.1e-67
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDNPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQD+PVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDK 130
           CPQIHSDDK
Sbjct: 121 CPQIHSDDK 129

[Close]

BLAST of Cla97C07G133000 vs. TrEMBL
Match: tr|A0A2P4LPU0|A0A2P4LPU0_QUESU (Lob domain-containing protein 12 OS=Quercus suber OX=58331 GN=CFP56_45424 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.9e-62
Identity = 133/171 (77.78%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPV QR 
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVHQRA 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDNPVFPN 120
           DAV SLVYEA+ARVRDPVYGCVGAIS+LQNQVSQLQMQLAVAQAEILCIQMQQ+ PV P 
Sbjct: 61  DAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAQAEILCIQMQQE-PVMPT 120

Query: 121 CPQIHSDDKXXXXXXXXXXXXXXQCLNFASSPNVIYD-----TIFGHDIVS 167
            PQ+  DDK              Q LNF+SS NVI D     +IFGHD+VS
Sbjct: 121 -PQMDPDDK----SSYLFHDSLPQYLNFSSSSNVINDSFKRESIFGHDMVS 165

[Close]

BLAST of Cla97C07G133000 vs. TrEMBL
Match: tr|A0A1Q3D909|A0A1Q3D909_CEPFO (DUF260 domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_32408 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.6e-61
Identity = 127/170 (74.71%), Postives = 137/170 (80.59%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDC+FAPYFPSDDPHKFAIVHKVFGASNVSKMLQELP+ QR 
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCVFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPIHQRA 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDNPVFPN 120
           DAV SLVYEA+ARVRDPVYGCVGAISYLQNQ+SQLQMQLAVAQAEILCIQMQ D P+ P 
Sbjct: 61  DAVSSLVYEANARVRDPVYGCVGAISYLQNQISQLQMQLAVAQAEILCIQMQHD-PIMPI 120

Query: 121 CPQIHSDDKXXXXXXXXXXXXXXQCLNFASSPNVIY-----DTIFGHDIV 166
             Q+  DDK              Q LNF SS NVI+     ++IFGHD+V
Sbjct: 121 TSQLDPDDK-----SFLLHDDLPQYLNFNSSSNVIHESLKRESIFGHDMV 164

[Close]

BLAST of Cla97C07G133000 vs. TrEMBL
Match: tr|A0A2N9GRE8|A0A2N9GRE8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30047 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.1e-61
Identity = 133/171 (77.78%), Postives = 138/171 (80.70%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPV QR 
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVHQRA 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDNPVFPN 120
           DAV SLVYEA+ARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILC QMQQ+ PV P 
Sbjct: 61  DAVSSLVYEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCNQMQQE-PVMPT 120

Query: 121 CPQIHSDDKXXXXXXXXXXXXXXQCLNFASSPNVIYD-----TIFGHDIVS 167
             QI  DDK              Q LNFASS NVI+D     +IFG D+VS
Sbjct: 121 -QQIDPDDK-----SYFLNDNLPQYLNFASSSNVIHDSFKRESIFGQDMVS 164

[Close]

BLAST of Cla97C07G133000 vs. Swiss-Prot
Match: sp|Q8LBW3|LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 1.3e-53
Identity = 103/112 (91.96%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 3   GNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDA 62
           G+SPCASCKLLRRRCAKDCIFAPYFP DDPHKFAIVHKVFGASNVSKMLQELPV QR DA
Sbjct: 5   GSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADA 64

Query: 63  VMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQD 115
           V SLV+EA+ARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ +
Sbjct: 65  VNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNE 116

[Close]

BLAST of Cla97C07G133000 vs. Swiss-Prot
Match: sp|Q9SHE9|LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.5e-43
Identity = 84/123 (68.29%), Postives = 103/123 (83.74%), Query Frame = 0


Query: 2   GGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGD 61
           G  SPCA+CKLLRRRCA+DC+F+PYFP+D+P KFA VH+VFGASNV+KMLQELP+ QRGD
Sbjct: 9   GAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGD 68

Query: 62  AVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDN--PVFP 121
           AV S+VYEA+ARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++++Q    P   
Sbjct: 69  AVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHG 128

Query: 122 NCP 123
            CP
Sbjct: 129 LCP 131

[Close]

BLAST of Cla97C07G133000 vs. Swiss-Prot
Match: sp|Q9FML4|LOB_ARATH (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.0e-36
Identity = 72/103 (69.90%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 4   NSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAV 63
           NSPCA+CK LRR+C   CIFAPYFP ++PHKFA VHK+FGASNV+K+L EL   QR DAV
Sbjct: 9   NSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAV 68

Query: 64  MSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 107
            SL YEA ARVRDPVYGCVGAISYLQ QV +LQ +L  A A++
Sbjct: 69  NSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADL 111

[Close]

BLAST of Cla97C07G133000 vs. Swiss-Prot
Match: sp|Q9SA51|LBD3_ARATH (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.3e-36
Identity = 73/107 (68.22%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 5   SPCASCKLLRRRCAKD-CIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAV 64
           SPCA CKLLRR+C KD C+FAPYFP+ +P+KFAIVHK+FGASNV+KMLQEL    R DAV
Sbjct: 13  SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAV 72

Query: 65  MSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQ 111
            S+VYEA+AR++DPVYGCVG IS L  Q+  LQ QLA AQAE++ I+
Sbjct: 73  DSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR 119

[Close]

BLAST of Cla97C07G133000 vs. Swiss-Prot
Match: sp|O04479|AS2_ARATH (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 3.8e-34
Identity = 68/103 (66.02%), Postives = 82/103 (79.61%), Query Frame = 0


Query: 4   NSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAV 63
           NSPCA+CK LRR+C  +C+FAPYFP D P KFA VHKVFGASNV+K+L EL   QR DAV
Sbjct: 7   NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAV 66

Query: 64  MSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 107
            SL YEA  R+RDPVYGCVG IS LQ+Q+ QLQ+ L+ A++E+
Sbjct: 67  NSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSEL 109

[Close]

BLAST of Cla97C07G133000 vs. TAIR10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 210.7 bits (535), Expect = 6.9e-55
Identity = 103/112 (91.96%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 3   GNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDA 62
           G+SPCASCKLLRRRCAKDCIFAPYFP DDPHKFAIVHKVFGASNVSKMLQELPV QR DA
Sbjct: 5   GSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADA 64

Query: 63  VMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQD 115
           V SLV+EA+ARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ +
Sbjct: 65  VNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNE 116

[Close]

BLAST of Cla97C07G133000 vs. TAIR10
Match: AT1G31320.1 (LOB domain-containing protein 4)

HSP 1 Score: 175.6 bits (444), Expect = 2.5e-44
Identity = 84/123 (68.29%), Postives = 103/123 (83.74%), Query Frame = 0


Query: 2   GGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGD 61
           G  SPCA+CKLLRRRCA+DC+F+PYFP+D+P KFA VH+VFGASNV+KMLQELP+ QRGD
Sbjct: 9   GAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGD 68

Query: 62  AVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDN--PVFP 121
           AV S+VYEA+ARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++++Q    P   
Sbjct: 69  AVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHG 128

Query: 122 NCP 123
            CP
Sbjct: 129 LCP 131

[Close]

BLAST of Cla97C07G133000 vs. TAIR10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 152.5 bits (384), Expect = 2.2e-37
Identity = 72/103 (69.90%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 4   NSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAV 63
           NSPCA+CK LRR+C   CIFAPYFP ++PHKFA VHK+FGASNV+K+L EL   QR DAV
Sbjct: 9   NSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAV 68

Query: 64  MSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 107
            SL YEA ARVRDPVYGCVGAISYLQ QV +LQ +L  A A++
Sbjct: 69  NSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADL 111

[Close]

BLAST of Cla97C07G133000 vs. TAIR10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9)

HSP 1 Score: 152.1 bits (383), Expect = 2.9e-37
Identity = 73/107 (68.22%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 5   SPCASCKLLRRRCAKD-CIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAV 64
           SPCA CKLLRR+C KD C+FAPYFP+ +P+KFAIVHK+FGASNV+KMLQEL    R DAV
Sbjct: 13  SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAV 72

Query: 65  MSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQ 111
            S+VYEA+AR++DPVYGCVG IS L  Q+  LQ QLA AQAE++ I+
Sbjct: 73  DSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR 119

[Close]

BLAST of Cla97C07G133000 vs. TAIR10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 146.0 bits (367), Expect = 2.1e-35
Identity = 68/103 (66.02%), Postives = 82/103 (79.61%), Query Frame = 0


Query: 4   NSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAV 63
           NSPCA+CK LRR+C  +C+FAPYFP D P KFA VHKVFGASNV+K+L EL   QR DAV
Sbjct: 7   NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAV 66

Query: 64  MSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 107
            SL YEA  R+RDPVYGCVG IS LQ+Q+ QLQ+ L+ A++E+
Sbjct: 67  NSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSEL 109

The following BLAST results are available for this feature:

BLAST of Cla97C07G133000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957028.1	1.3e-78	96.99	LOB domain-containing protein 12-like [Cucurbita moschata]	[more]
XP_004148190.1	2.8e-78	98.20	PREDICTED: LOB domain-containing protein 12-like [Cucumis sativus] >KGN50694.1 h...	[more]
XP_023536420.1	2.8e-78	96.99	LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo]	[more]
XP_022977151.1	6.3e-78	95.78	LOB domain-containing protein 12-like [Cucurbita maxima]	[more]
XP_022146841.1	7.7e-76	88.02	LOB domain-containing protein 12-like [Momordica charantia]	[more]

BLAST of Cla97C07G133000 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KP74\|A0A0A0KP74_CUCSA	1.9e-78	98.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G215140 PE=4 SV=1	[more]
tr\|A0A1S3BZ14\|A0A1S3BZ14_CUCME	1.1e-67	99.22	LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103495138 PE...	[more]
tr\|A0A2P4LPU0\|A0A2P4LPU0_QUESU	1.9e-62	77.78	Lob domain-containing protein 12 OS=Quercus suber OX=58331 GN=CFP56_45424 PE=4 S...	[more]
tr\|A0A1Q3D909\|A0A1Q3D909_CEPFO	1.6e-61	74.71	DUF260 domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 G...	[more]
tr\|A0A2N9GRE8\|A0A2N9GRE8_FAGSY	2.1e-61	77.78	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30047 PE=4 SV=1	[more]

BLAST of Cla97C07G133000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LBW3\|LBD12_ARATH	1.3e-53	91.96	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
sp\|Q9SHE9\|LBD4_ARATH	4.5e-43	68.29	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
sp\|Q9FML4\|LOB_ARATH	4.0e-36	69.90	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
sp\|Q9SA51\|LBD3_ARATH	5.3e-36	68.22	LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=...	[more]
sp\|O04479\|AS2_ARATH	3.8e-34	66.02	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]

BLAST of Cla97C07G133000 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30130.1	6.9e-55	91.96	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	2.5e-44	68.29	LOB domain-containing protein 4	[more]
AT5G63090.2	2.2e-37	69.90	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G16530.1	2.9e-37	68.22	ASYMMETRIC LEAVES 2-like 9	[more]
AT1G65620.1	2.1e-35	66.02	Lateral organ boundaries (LOB) domain family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004883	LOB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005951	carbamoyl-phosphate synthase complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G133000.1	Cla97C07G133000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 85..105
None	No IPR available	PANTHER	PTHR31301:SF61	SUBFAMILY NOT NAMED	coord: 1..166
None	No IPR available	PANTHER	PTHR31301	FAMILY NOT NAMED	coord: 1..166
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 6..103 e-value: 1.5E-42 score: 144.1
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 5..106 score: 26.691

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C07G133000	Cla007240	Watermelon (97103) v1	wmwmbB167
Cla97C07G133000	Cla013390	Watermelon (97103) v1	wmwmbB346
Cla97C07G133000	Csa5G215140	Cucumber (Chinese Long) v2	cuwmbB392
Cla97C07G133000	Csa6G181550	Cucumber (Chinese Long) v2	cuwmbB484
Cla97C07G133000	MELO3C018380	Melon (DHL92) v3.5.1	mewmbB069
Cla97C07G133000	ClCG07G004530	Watermelon (Charleston Gray)	wcgwmbB307
Cla97C07G133000	ClCG02G019310	Watermelon (Charleston Gray)	wcgwmbB165
Cla97C07G133000	CSPI05G11050	Wild cucumber (PI 183967)	cpiwmbB412
Cla97C07G133000	CSPI06G13500	Wild cucumber (PI 183967)	cpiwmbB510
Cla97C07G133000	Cucsa.144430	Cucumber (Gy14) v1	cgywmbB244
Cla97C07G133000	Cucsa.139480	Cucumber (Gy14) v1	cgywmbB236
Cla97C07G133000	CmaCh04G011020	Cucurbita maxima (Rimu)	cmawmbB780
Cla97C07G133000	CmaCh04G001340	Cucurbita maxima (Rimu)	cmawmbB781
Cla97C07G133000	CmaCh02G007250	Cucurbita maxima (Rimu)	cmawmbB658
Cla97C07G133000	CmaCh20G003290	Cucurbita maxima (Rimu)	cmawmbB596
Cla97C07G133000	CmoCh02G007260	Cucurbita moschata (Rifu)	cmowmbB633
Cla97C07G133000	CmoCh20G003540	Cucurbita moschata (Rifu)	cmowmbB571
Cla97C07G133000	CmoCh04G011660	Cucurbita moschata (Rifu)	cmowmbB754
Cla97C07G133000	CmoCh04G001290	Cucurbita moschata (Rifu)	cmowmbB755
Cla97C07G133000	Lsi10G014580	Bottle gourd (USVL1VR-Ls)	lsiwmbB069
Cla97C07G133000	Lsi04G010660	Bottle gourd (USVL1VR-Ls)	lsiwmbB298
Cla97C07G133000	CsGy6G013490	Cucumber (Gy14) v2	cgybwmbB461
Cla97C07G133000	CsGy5G008370	Cucumber (Gy14) v2	cgybwmbB375
Cla97C07G133000	MELO3C018380.2	Melon (DHL92) v3.6.1	medwmbB064
Cla97C07G133000	Carg18389	Silver-seed gourd	carwmbB0091
Cla97C07G133000	Carg23873	Silver-seed gourd	carwmbB0540
Cla97C07G133000	Carg00202	Silver-seed gourd	carwmbB0700
Cla97C07G133000	CsaV3_6G015930	Cucumber (Chinese Long) v3	cucwmbB502
Cla97C07G133000	CsaV3_5G010470	Cucumber (Chinese Long) v3	cucwmbB407
Cla97C07G133000	Bhi07G000470	Wax gourd	wgowmbB538

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla97C07G133000	Cla97C02G045290	Watermelon (97103) v2	wmbwmbB107

The following block(s) are covering this gene:

None