Cla97C02G031520 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATGGCGCAGTGGTGCGGCGCTGTGGCTAGGGGAGTGATGGCGGCGGAGCGACGGTCTCCTTCTCTAACGTCGTCAATGGTGGTCGAAGGACTGGTGCCAATCCTTTGTGGACGAGGTGACAAGAAGACGAAGAAAGGGAAAAGATTCAAAGGCTCGTACGGAAACGCCAGGCCGAAGAAGGAGAAGAAGATACAGCGAATCAAGGATAAAATTGAGGTTCCTAGTTCCACTCGTTGGCCTCTTCCTTTCAAGCTTATCTGA ATGGCGATGGCGCAGTGGTGCGGCGCTGTGGCTAGGGGAGTGATGGCGGCGGAGCGACGGTCTCCTTCTCTAACGTCGTCAATGGTGGTCGAAGGACTGGTGCCAATCCTTTGTGGACGAGGTGACAAGAAGACGAAGAAAGGGAAAAGATTCAAAGGCTCGTACGGAAACGCCAGGCCGAAGAAGGAGAAGAAGATACAGCGAATCAAGGATAAAATTGAGGTTCCTAGTTCCACTCGTTGGCCTCTTCCTTTCAAGCTTATCTGA ATGGCGATGGCGCAGTGGTGCGGCGCTGTGGCTAGGGGAGTGATGGCGGCGGAGCGACGGTCTCCTTCTCTAACGTCGTCAATGGTGGTCGAAGGACTGGTGCCAATCCTTTGTGGACGAGGTGACAAGAAGACGAAGAAAGGGAAAAGATTCAAAGGCTCGTACGGAAACGCCAGGCCGAAGAAGGAGAAGAAGATACAGCGAATCAAGGATAAAATTGAGGTTCCTAGTTCCACTCGTTGGCCTCTTCCTTTCAAGCTTATCTGA MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI
BLAST of Cla97C02G031520 vs. NCBI nr
Match: XP_022933003.1 (30S ribosomal protein S31, mitochondrial [Cucurbita moschata] >XP_023529502.1 30S ribosomal protein S31, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >XP_023529503.1 30S ribosomal protein S31, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 166.4 bits (420), Expect = 4.4e-38 Identity = 84/88 (95.45%), Postives = 84/88 (95.45%), Query Frame = 0
BLAST of Cla97C02G031520 vs. NCBI nr
Match: XP_008448047.1 (PREDICTED: 30S ribosomal protein S31, mitochondrial [Cucumis melo]) HSP 1 Score: 165.6 bits (418), Expect = 7.5e-38 Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of Cla97C02G031520 vs. NCBI nr
Match: XP_011658557.1 (PREDICTED: 30S ribosomal protein S31, mitochondrial [Cucumis sativus] >KGN43178.1 30S ribosomal protein S31, mitochondrial [Cucumis sativus]) HSP 1 Score: 164.9 bits (416), Expect = 1.3e-37 Identity = 83/88 (94.32%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of Cla97C02G031520 vs. NCBI nr
Match: XP_022952601.1 (30S ribosomal protein S31, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 159.8 bits (403), Expect = 4.1e-36 Identity = 80/86 (93.02%), Postives = 82/86 (95.35%), Query Frame = 0
BLAST of Cla97C02G031520 vs. NCBI nr
Match: XP_022971575.1 (30S ribosomal protein S31, mitochondrial [Cucurbita maxima]) HSP 1 Score: 159.5 bits (402), Expect = 5.4e-36 Identity = 80/86 (93.02%), Postives = 81/86 (94.19%), Query Frame = 0
BLAST of Cla97C02G031520 vs. TrEMBL
Match: tr|A0A1S3BI88|A0A1S3BI88_CUCME (30S ribosomal protein S31, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490344 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 5.0e-38 Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of Cla97C02G031520 vs. TrEMBL
Match: tr|A0A0A0K141|A0A0A0K141_CUCSA (30S ribosomal protein S31, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_7G006280 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 8.4e-38 Identity = 83/88 (94.32%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of Cla97C02G031520 vs. TrEMBL
Match: tr|A0A2N9IYS6|A0A2N9IYS6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58369 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 7.9e-28 Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 0
BLAST of Cla97C02G031520 vs. TrEMBL
Match: tr|A0A218X516|A0A218X516_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr019615 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 2.0e-26 Identity = 65/93 (69.89%), Postives = 75/93 (80.65%), Query Frame = 0
BLAST of Cla97C02G031520 vs. TrEMBL
Match: tr|A0A1R3HVM9|A0A1R3HVM9_COCAP (Putative 30S ribosomal protein S31, mitochondrial OS=Corchorus capsularis OX=210143 GN=CCACVL1_16756 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 2.0e-26 Identity = 69/91 (75.82%), Postives = 72/91 (79.12%), Query Frame = 0
BLAST of Cla97C02G031520 vs. Swiss-Prot
Match: sp|Q9SJU8|RT31_ARATH (30S ribosomal protein S31, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g21290 PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 7.2e-24 Identity = 58/98 (59.18%), Postives = 67/98 (68.37%), Query Frame = 0
BLAST of Cla97C02G031520 vs. Swiss-Prot
Match: sp|P47909|RT31_ORYSJ (30S ribosomal protein S31, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0528100 PE=3 SV=2) HSP 1 Score: 97.4 bits (241), Expect = 8.2e-20 Identity = 44/53 (83.02%), Postives = 50/53 (94.34%), Query Frame = 0
BLAST of Cla97C02G031520 vs. Swiss-Prot
Match: sp|P47910|RR31_SPIOL (30S ribosomal protein S31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS31 PE=1 SV=2) HSP 1 Score: 45.4 bits (106), Expect = 3.7e-04 Identity = 21/30 (70.00%), Postives = 24/30 (80.00%), Query Frame = 0
BLAST of Cla97C02G031520 vs. TAIR10
Match: AT2G21290.1 (unknown protein) HSP 1 Score: 110.9 bits (276), Expect = 4.0e-25 Identity = 58/98 (59.18%), Postives = 67/98 (68.37%), Query Frame = 0
BLAST of Cla97C02G031520 vs. TAIR10
Match: AT2G38140.1 (plastid-specific ribosomal protein 4) HSP 1 Score: 43.5 bits (101), Expect = 7.8e-05 Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |