Cla97C01G006130 (gene) Watermelon (97103) v2

Overview
NameCla97C01G006130
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Description50S ribosomal protein-related, putative
LocationCla97Chr01 : 6011131 .. 6011586 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGCGTCGCTCAGAGTCCCACTTTAAGTCCTAGGACCAGTCCTCTTGTTCATCTCCGACGCCGGAAAACCACTCTACGGATGCTTCTCACTCTGAATTCCGGCCGTCGGTCTCCTCGCCGCCGCGCCTTGCCGGAGAAGAAGAGAGACGACCATAAGGATTTTTCCCGGAGCAATACGTTGAAGGATTTGTTCGTTTCGTCGCCGCCCTATGTTGGAACTGACGGCGATGTTCACGAGACGACGGTCGCGGCTCCGTCCCGGAACGTGACTCCGGTTTGTAAGGAGAAGGAGTATGGTGAGGTTGGATCAGCCGGTTGGAATCCCGGTTCACCTAGACCCGGTTGGACCGGTTTCCGATACAAATACCTTCTTCGGAAAACTTGGCGGCCGGTACTCGCCGGAATCCCCGAGTAA

mRNA sequence

ATGGCGTCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGCGTCGCTCAGAGTCCCACTTTAAGTCCTAGGACCAGTCCTCTTGTTCATCTCCGACGCCGGAAAACCACTCTACGGATGCTTCTCACTCTGAATTCCGGCCGTCGGTCTCCTCGCCGCCGCGCCTTGCCGGAGAAGAAGAGAGACGACCATAAGGATTTTTCCCGGAGCAATACGTTGAAGGATTTGTTCGTTTCGTCGCCGCCCTATGTTGGAACTGACGGCGATGTTCACGAGACGACGGTCGCGGCTCCGTCCCGGAACGTGACTCCGGTTTGTAAGGAGAAGGAGTATGGTGAGGTTGGATCAGCCGGTTGGAATCCCGGTTCACCTAGACCCGGTTGGACCGGTTTCCGATACAAATACCTTCTTCGGAAAACTTGGCGGCCGGTACTCGCCGGAATCCCCGAGTAA

Coding sequence (CDS)

ATGGCGTCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGCGTCGCTCAGAGTCCCACTTTAAGTCCTAGGACCAGTCCTCTTGTTCATCTCCGACGCCGGAAAACCACTCTACGGATGCTTCTCACTCTGAATTCCGGCCGTCGGTCTCCTCGCCGCCGCGCCTTGCCGGAGAAGAAGAGAGACGACCATAAGGATTTTTCCCGGAGCAATACGTTGAAGGATTTGTTCGTTTCGTCGCCGCCCTATGTTGGAACTGACGGCGATGTTCACGAGACGACGGTCGCGGCTCCGTCCCGGAACGTGACTCCGGTTTGTAAGGAGAAGGAGTATGGTGAGGTTGGATCAGCCGGTTGGAATCCCGGTTCACCTAGACCCGGTTGGACCGGTTTCCGATACAAATACCTTCTTCGGAAAACTTGGCGGCCGGTACTCGCCGGAATCCCCGAGTAA

Protein sequence

MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRRRALPEKKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVCKEKEYGEVGSAGWNPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE
Homology
[Close]
BLAST of Cla97C01G006130 vs. NCBI nr
Match: XP_011655483.1 (PREDICTED: uncharacterized protein LOC105435544 [Cucumis sativus] >KGN51540.1 hypothetical protein Csa_5G576820 [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 6.3e-69
Identity = 135/153 (88.24%), Postives = 139/153 (90.85%), Query Frame = 0 

Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRRRALPE- 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT NSGRRSPRRR+LPE 
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN 60

Query: 61  KKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVC-KEKEYGEVGSA 120
           K RDD K  SRSNTLKDLFVSSPPY+GTD DVH+T V AP+RNVTPVC KEKE G VGS 
Sbjct: 61  KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP 120

Query: 121 GWNPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE 152
           GWNPGSPRPGWTGFRYKYLLRKTWRPVL GIPE
Sbjct: 121 GWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 153

[Close]
BLAST of Cla97C01G006130 vs. NCBI nr
Match: XP_008467191.1 (PREDICTED: uncharacterized protein LOC103504599 [Cucumis melo])

HSP 1 Score: 265.8 bits (678), Expect = 9.1e-68
Identity = 138/155 (89.03%), Postives = 140/155 (90.32%), Query Frame = 0 

Query: 1   MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRR-RALP 60
           MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT NSGRRSPRR RALP
Sbjct: 1   MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALP 60

Query: 61  E-KKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVC-KEKEYGEVG 120
           E KKRDDHK  SRSNTLKDLFVSSPPYVGTD DVHET V AP++N TPVC KEKE G VG
Sbjct: 61  ENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAPTQNATPVCEKEKEEGRVG 120

Query: 121 SAGWNPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE 152
           S GWNPGSPRPGWTGFRYKYLLRKTWRPVL GIPE
Sbjct: 121 SPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 155

[Close]
BLAST of Cla97C01G006130 vs. NCBI nr
Match: XP_023513243.1 (uncharacterized protein LOC111777755 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262.3 bits (669), Expect = 1.0e-66
Identity = 127/151 (84.11%), Postives = 139/151 (92.05%), Query Frame = 0 

Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRRRALPEK 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT NS RRSPRRRALP+K
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSARRSPRRRALPDK 60

Query: 61  KRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVCKEKEYGEVGSAGW 120
           KRDDHKD SRSNTLKDLFVSSPPY  ++ +++ET  AAP RNVTPVC+E++ GE+G  GW
Sbjct: 61  KRDDHKDLSRSNTLKDLFVSSPPYDESECEINETVAAAPIRNVTPVCREED-GEIGPTGW 120

Query: 121 NPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE 152
           +PGSPRPGWTGFRYKYLLRKTWRP+LAGIPE
Sbjct: 121 HPGSPRPGWTGFRYKYLLRKTWRPLLAGIPE 150

[Close]
BLAST of Cla97C01G006130 vs. NCBI nr
Match: XP_022963063.1 (uncharacterized protein LOC111463373 [Cucurbita moschata])

HSP 1 Score: 260.8 bits (665), Expect = 2.9e-66
Identity = 126/151 (83.44%), Postives = 138/151 (91.39%), Query Frame = 0 

Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRRRALPEK 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT NS RRSPRRRALP+K
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSARRSPRRRALPDK 60

Query: 61  KRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVCKEKEYGEVGSAGW 120
           KRDDHKD SRSNTLKDLFVSSPPY  +DG+++ET  AAP RNVTPVC+E++ GE+G   W
Sbjct: 61  KRDDHKDLSRSNTLKDLFVSSPPYDESDGEINETVAAAPIRNVTPVCREED-GEIGPTSW 120

Query: 121 NPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE 152
           +PGSPRPGWTGFR+KYLLRKTWRP+LA IPE
Sbjct: 121 HPGSPRPGWTGFRHKYLLRKTWRPLLASIPE 150

[Close]
BLAST of Cla97C01G006130 vs. NCBI nr
Match: XP_022152317.1 (uncharacterized protein LOC111020064 [Momordica charantia])

HSP 1 Score: 254.6 bits (649), Expect = 2.1e-64
Identity = 128/152 (84.21%), Postives = 133/152 (87.50%), Query Frame = 0 

Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRRRALPEK 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT NSGRRSPRRRALP+K
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPDK 60

Query: 61  KRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHE-TTVAAPSRNVTPVCKEKEYGEVGSAG 120
           KR DH D +RSNTLKDLFVSSPPY G DG++ E    A  S N+ PVCKEKE GEVGS G
Sbjct: 61  KR-DHTDLARSNTLKDLFVSSPPYDGNDGEIKEAAATATASPNLIPVCKEKEDGEVGSTG 120

Query: 121 WNPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE 152
           W PGSPRP WTGFRYKYLLRKTWRPVLAGIPE
Sbjct: 121 WKPGSPRPAWTGFRYKYLLRKTWRPVLAGIPE 151

[Close]
BLAST of Cla97C01G006130 vs. TrEMBL
Match: tr|A0A0A0KPK6|A0A0A0KPK6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576820 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.2e-69
Identity = 135/153 (88.24%), Postives = 139/153 (90.85%), Query Frame = 0 

Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRRRALPE- 60
           MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT NSGRRSPRRR+LPE 
Sbjct: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRSLPEN 60

Query: 61  KKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVC-KEKEYGEVGSA 120
           K RDD K  SRSNTLKDLFVSSPPY+GTD DVH+T V AP+RNVTPVC KEKE G VGS 
Sbjct: 61  KNRDDRKGLSRSNTLKDLFVSSPPYLGTDCDVHQTAVTAPTRNVTPVCEKEKEEGHVGSP 120

Query: 121 GWNPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE 152
           GWNPGSPRPGWTGFRYKYLLRKTWRPVL GIPE
Sbjct: 121 GWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 153

[Close]
BLAST of Cla97C01G006130 vs. TrEMBL
Match: tr|A0A1S3CSY3|A0A1S3CSY3_CUCME (uncharacterized protein LOC103504599 OS=Cucumis melo OX=3656 GN=LOC103504599 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 6.0e-68
Identity = 138/155 (89.03%), Postives = 140/155 (90.32%), Query Frame = 0 

Query: 1   MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRR-RALP 60
           MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLT NSGRRSPRR RALP
Sbjct: 1   MASLLKFKLLPTHYCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRPRALP 60

Query: 61  E-KKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVC-KEKEYGEVG 120
           E KKRDDHK  SRSNTLKDLFVSSPPYVGTD DVHET V AP++N TPVC KEKE G VG
Sbjct: 61  ENKKRDDHKGLSRSNTLKDLFVSSPPYVGTDCDVHETAVTAPTQNATPVCEKEKEEGRVG 120

Query: 121 SAGWNPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE 152
           S GWNPGSPRPGWTGFRYKYLLRKTWRPVL GIPE
Sbjct: 121 SPGWNPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE 155

[Close]
BLAST of Cla97C01G006130 vs. TrEMBL
Match: tr|A0A2P6R1J5|A0A2P6R1J5_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0434621 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-28
Identity = 80/152 (52.63%), Postives = 96/152 (63.16%), Query Frame = 0 

Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGRRSPRRRALPEK 60
           MA+L KFKLL  HCG AQSPT SPRTSPL+ L RRK +L MLL+ +  RRS RR+  P  
Sbjct: 12  MATLQKFKLLALHCGAAQSPTRSPRTSPLIQLPRRKPSLLMLLSRSGSRRSTRRQDQPVP 71

Query: 61  KRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTPVCKEKEYGEVGSAGW 120
            +   +   R N+LKDLFVSSPP+  ++                 + K +E+G V  AG 
Sbjct: 72  VQPPPE---RRNSLKDLFVSSPPFEESE----------------KIEKRREFGLVVVAGG 131

Query: 121 -NPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE 152
             PGSPRPGWTGFRYK LLR+ WRPVL  IPE
Sbjct: 132 VGPGSPRPGWTGFRYKSLLRRAWRPVLVTIPE 144

[Close]
BLAST of Cla97C01G006130 vs. TrEMBL
Match: tr|A0A2C9VNL8|A0A2C9VNL8_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G065600 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-28
Identity = 86/166 (51.81%), Postives = 97/166 (58.43%), Query Frame = 0 

Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLN--SGRRSPRRR--- 60
           MA+L KFKLL T CGVAQSPT SPRTSPLVHLRR+KTTLRMLLT +  SGR SP R    
Sbjct: 1   MATLQKFKLLATQCGVAQSPTRSPRTSPLVHLRRKKTTLRMLLTRSSGSGRLSPPRHEPP 60

Query: 61  ----------ALPEKKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVTP 120
                      LPEKKRD         TLKDLFVSSPP    +G   E       +    
Sbjct: 61  PVHRQPAILAPLPEKKRD---------TLKDLFVSSPPPFENEGSKGEAREVIGGK---- 120

Query: 121 VCKEKEYGEVGSAGWNPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE 152
            C+       G      GSPRPGW GFR++ L+R+ WRP+LA IPE
Sbjct: 121 -CEVFRMRVNGLLVEPAGSPRPGWVGFRHRSLIRRAWRPLLAAIPE 152

[Close]
BLAST of Cla97C01G006130 vs. TrEMBL
Match: tr|A0A067K324|A0A067K324_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_18374 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.7e-28
Identity = 85/167 (50.90%), Postives = 99/167 (59.28%), Query Frame = 0 

Query: 1   MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLR-RRKTTLRMLLTLN--SGRRSPRRR-- 60
           MA+L KFKLL T CGVA+SPT SPRTSP+VHLR R+KTTLRMLLT +  SGRRSPRR   
Sbjct: 1   MATLQKFKLLATQCGVAESPTRSPRTSPIVHLRSRKKTTLRMLLTRSSGSGRRSPRRHEP 60

Query: 61  -----------ALPEKKRDDHKDFSRSNTLKDLFVSSPPYVGTDGDVHETTVAAPSRNVT 120
                       LPEKKRD         TLKDLFVSSP +     +  E         + 
Sbjct: 61  SPIPHQQRLLPPLPEKKRD---------TLKDLFVSSPSF-----EEEEENKDKVREMIG 120

Query: 121 PVCKEKEYGEVGSAGWNPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE 152
             C+       G      GSPRPGW GFR++YL+R+ WRP+L GIPE
Sbjct: 121 GKCEVFRMRVNGLGAELAGSPRPGWIGFRHRYLIRRAWRPMLVGIPE 153

[Close]
BLAST of Cla97C01G006130 vs. TAIR10
Match: AT1G66890.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 71.2 bits (173), Expect = 6.0e-13
Identity = 73/166 (43.98%), Postives = 90/166 (54.22%), Query Frame = 0 

Query: 3   SLLKFKLLPTHCG-VAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNSGR-RSPR-RRALPE 62
           SL KFKLL THC  VA+SPT     SP++HLRRRK TLR+LLT +S R R P  +  + E
Sbjct: 2   SLQKFKLLATHCSTVAESPT----RSPVIHLRRRK-TLRLLLTRSSDRWRLPEIQNNVDE 61

Query: 63  KKRDDHKDFSRSN-TLKDLFVSSPPYV----------GTDGDVHETTVAAPSRNVTPVCK 122
            K+ D +   RS+  L DLFVSSP             GT  +V E     P   V  V  
Sbjct: 62  SKKTDKRGKIRSSRKLGDLFVSSPXXXXXXXXXXXXKGTKMEV-EMERDVP---VNGVSN 121

Query: 123 EKEYGEVGSA---GWNPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE 152
              +GE  +A   G+N GS RP  +      LLR++WRPVL  IPE
Sbjct: 122 NAGFGEEITARRVGFN-GSVRPMSSVTLRCRLLRRSWRPVLVTIPE 157

[Close]
BLAST of Cla97C01G006130 vs. TAIR10
Match: AT5G16200.1 (50S ribosomal protein-related)

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-10
Identity = 67/176 (38.07%), Postives = 85/176 (48.30%), Query Frame = 0 

Query: 1   MASLLKFKLLPTH----CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTLNS-GRRSPRRR 60
           ++ L KFKL   H       A SPT+SP  SP+ +LRRRK TLRML   +S  RR   R+
Sbjct: 3   LSRLHKFKLFAAHRSLEASTAGSPTMSPTKSPVFNLRRRK-TLRMLFDKSSDSRRRNLRQ 62

Query: 61  ALPE----------KKRDDHKDFSRSNTLKDLFVS--SPPYVG---TDGDVHETTVAAPS 120
            L E          KKR +H+   R   L++L V+  SPPY G    DG   E +  +P 
Sbjct: 63  ILEESPESDGNSGNKKRGNHRATRRK--LRELLVTSPSPPYKGREDIDGIGEERSEISP- 122

Query: 121 RNVTPVCKEKE-----YGEVGSAGWNPGSPRPGWTGFRYKYLLRKTWRPVLAGIPE 152
            NVT     +E     +G  GS              FR + +LRK WRPVL  IPE
Sbjct: 123 LNVTSNGDGRELTARRFGSSGSV-----------QSFRLR-ILRKPWRPVLVSIPE 162

[Close]
BLAST of Cla97C01G006130 vs. TAIR10
Match: AT1G68430.1 (unknown protein)

HSP 1 Score: 41.6 bits (96), Expect = 5.1e-04
Identity = 25/36 (69.44%), Postives = 27/36 (75.00%), Query Frame = 0 

Query: 1  MASLLKFKLLPTHCGV-AQSPTL--SPRTSPLVHLR 34
          MA+L +FK L T CGV AQSPT   SPRTSPLV LR
Sbjct: 1  MATLQRFKFLGTQCGVAAQSPTRSPSPRTSPLVQLR 36

The following BLAST results are available for this feature:
BLAST of Cla97C01G006130 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011655483.16.3e-6988.24PREDICTED: uncharacterized protein LOC105435544 [Cucumis sativus] >KGN51540.1 hy... [more]
XP_008467191.19.1e-6889.03PREDICTED: uncharacterized protein LOC103504599 [Cucumis melo][more]
XP_023513243.11.0e-6684.11uncharacterized protein LOC111777755 [Cucurbita pepo subsp. pepo][more]
XP_022963063.12.9e-6683.44uncharacterized protein LOC111463373 [Cucurbita moschata][more]
XP_022152317.12.1e-6484.21uncharacterized protein LOC111020064 [Momordica charantia][more]
BLAST of Cla97C01G006130 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KPK6|A0A0A0KPK6_CUCSA4.2e-6988.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576820 PE=4 SV=1[more]
tr|A0A1S3CSY3|A0A1S3CSY3_CUCME6.0e-6889.03uncharacterized protein LOC103504599 OS=Cucumis melo OX=3656 GN=LOC103504599 PE=... [more]
tr|A0A2P6R1J5|A0A2P6R1J5_ROSCH1.2e-2852.63Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0434621 PE=4... [more]
tr|A0A2C9VNL8|A0A2C9VNL8_MANES1.2e-2851.81Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G065600 PE=4 SV=... [more]
tr|A0A067K324|A0A067K324_JATCU2.7e-2850.90Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_18374 PE=4 SV=1[more]
BLAST of Cla97C01G006130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C01G006130 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G66890.16.0e-1343.98FUNCTIONS IN: molecular_function unknown[more]
AT5G16200.11.2e-1038.0750S ribosomal protein-related[more]
AT1G68430.15.1e-0469.44unknown protein[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005840 ribosome
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G006130.1Cla97C01G006130.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..72
NoneNo IPR availablePANTHERPTHR34542:SF150S RIBOSOMAL PROTEIN RELATED PROTEINcoord: 1..151
NoneNo IPR availablePANTHERPTHR34542FAMILY NOT NAMEDcoord: 1..151

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C01G006130Cla003888Watermelon (97103) v1wmwmbB236
Cla97C01G006130Csa5G576820Cucumber (Chinese Long) v2cuwmbB344
Cla97C01G006130MELO3C005343Melon (DHL92) v3.5.1mewmbB009
Cla97C01G006130ClCG01G005860Watermelon (Charleston Gray)wcgwmbB089
Cla97C01G006130CSPI05G20030Wild cucumber (PI 183967)cpiwmbB358
Cla97C01G006130Cucsa.280750Cucumber (Gy14) v1cgywmbB485
Cla97C01G006130CmaCh04G020760Cucurbita maxima (Rimu)cmawmbB705
Cla97C01G006130CmaCh15G009250Cucurbita maxima (Rimu)cmawmbB286
Cla97C01G006130CmoCh15G009640Cucurbita moschata (Rifu)cmowmbB268
Cla97C01G006130CmoCh04G021710Cucurbita moschata (Rifu)cmowmbB676
Cla97C01G006130Lsi09G006200Bottle gourd (USVL1VR-Ls)lsiwmbB007
Cla97C01G006130MELO3C005343.2Melon (DHL92) v3.6.1medwmbB007
Cla97C01G006130Carg26600Silver-seed gourdcarwmbB0282
Cla97C01G006130Carg24927Silver-seed gourdcarwmbB0830
Cla97C01G006130CsaV3_5G028830Cucumber (Chinese Long) v3cucwmbB359
Cla97C01G006130Bhi12G000730Wax gourdwgowmbB054
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cla97C01G006130Cla97C11G215680Watermelon (97103) v2wmbwmbB004
The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C01G006130Watermelon (97103) v2wmbwmbB025
Cla97C01G006130Silver-seed gourdcarwmbB0870
Cla97C01G006130Silver-seed gourdcarwmbB1108
Cla97C01G006130Cucumber (Gy14) v2cgybwmbB324
Cla97C01G006130Cucumber (Gy14) v2cgybwmbB327
Cla97C01G006130Cucumber (Gy14) v1cgywmbB493
Cla97C01G006130Cucurbita maxima (Rimu)cmawmbB404
Cla97C01G006130Cucurbita maxima (Rimu)cmawmbB711
Cla97C01G006130Cucurbita moschata (Rifu)cmowmbB388
Cla97C01G006130Cucurbita moschata (Rifu)cmowmbB680
Cla97C01G006130Cucurbita moschata (Rifu)cmowmbB683
Cla97C01G006130Wild cucumber (PI 183967)cpiwmbB352
Cla97C01G006130Cucumber (Chinese Long) v3cucwmbB356
Cla97C01G006130Cucumber (Chinese Long) v2cuwmbB341
Cla97C01G006130Bottle gourd (USVL1VR-Ls)lsiwmbB258
Cla97C01G006130Melon (DHL92) v3.6.1medwmbB038
Cla97C01G006130Melon (DHL92) v3.5.1mewmbB042
Cla97C01G006130Watermelon (Charleston Gray)wcgwmbB216
Cla97C01G006130Watermelon (97103) v1wmwmbB195
Cla97C01G006130Wax gourdwgowmbB511