Cla021238 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla021238
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Elicitor-responsive protein 1 (AHRD V1 *--- B6T411_MAIZE); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Location	Chr5 : 1494013 .. 1496928 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTGATATTGGGATCGTCTGGAAGTTGTTTTATCAGATACCTTACAAGGATGTTGTTTTGTGGAGTGTCATGATCTCAGCATGCGTGAAAAATGGTCAGTATAATGAAGCATTTGATATTTTCAGAGAGATGCAAAATCAGGGAGGTTCAACCAAACCAAGTAAGTATTTTACCTGCTTGTGCTGATTTTGGTGTGCGTTTTCAATGAGAAGAAAATTGTAAGTCTACTGAATGCTTGTTCTTAATTGGGCGCTCAGGAGCTGGGAGAAAGTATCCAAGCTCATATAACAAAATGGGGGTACTCATCTAATACACATTTGATGTCAGCTTTGGTTGTTTTTTACTGCACACTTGGAAGGATAAAGCTAGGAAAACATGTTTTTGATGAGATTTCAACGAAGGAAGTAATTTGTTTGAGTTCGACGATTAAGGGTACGGAATGAATGGATGTGGGAGTGAGGCACTCAATACATTTTCAGACATGTTAAGTTATGGTTTAAAGCCTAATGGGGTGGTCTTCGTCTCTCTTTTATCTGCTTGTGCTCATTGTGGATTGGAAAAGGAAGGTTGGATATGGTTTCATTCGATGATTGACAAGTATGGCATTACTCCAATGGTGGCACATTATGCTTGTATCGTAGCTCATTCGGCAAGGAAAAATTAGAGAAGCTGTTAAATTTGTGAAGAAATGCCGGTAGAACCTGATACAGGAATCTGGGGTGCTCTTTTTTTCTGGTAGCAAATTAACTCATAGGCCCTGACATTGCAGATTCTTTTGTAAACAGCTCACTGATTGAAAATCCTAACAATATGCAATGTTACTCAACTTTTGTGCCGAGGAAAACAAATGGGAAGATACCCAATAAGGAATTTTGCTACCTTAAGATCGTTATAGTTATGGTCGCTGTTCCTCGGGGCTTCAGTTGCCGGCTCCCCTATTATGAGGTCACCAACTTCTTTGACTTTTTGGCACTGGGAAGGCGTCATACATGGTCTTACGGCTTTGCAAAGTCCTGTGTTTTTGGCAAATAATCGTCTGGGCCTAGTTACTGCAACCCCTTCTTCCATGTCAAGGCTCTTACTGTATCCAGTTGGAAAACTGATGGATGCACGGAAATTTGTCAGGTAACTCATACAGCTGATTTAGTGACTTCAACGTATTCATGTTTACTGATGATCATTGAATTCCATTAAATGTTGTGAGTTTATCTTTAATTTCAATGGAATTAATGACCTTAGTAGTTTTTATTTGCTTGAAACATCACTATGCCATAACACAACCTATCTATTTATGGCGTATGAAAAATGGTAGAGGATGTAGAGGAGCATCACAATAACCTACAAAATCGTTTGTTGAAAACATCTTTGGCCTTCTGCTTGAAGGTTCAAGCTATCCAATACATAATTCATGAAGGGGGGAATTCTTGAAGTGTTTCTTGTCAATGCCAAAGACATCAGACACACCAATCGACTTGGTACTCTCTTCTCTTATAGACTTTTTATTCTCTTATAGACATTTTCCTTTTATGCTGACCCATGTTGAGGAAGCGACTAGAGATGATCACAGCCCGTCTCGGCCCCCTACGTCCATTCTCATCCTTGCAAAATTTTCTGTTTAGTTTTACAAGATCGAGAAATTCATTTCCCGCCGGGATCGAGTTCCTATAGGAAAAAATCTTCATTCTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAATCCTCAACCAAATAAAAATTTCAATAATTTTGATGTATAAGTGGACCCTTTCCAATATAATTTTCACTTAAATAAAACATTATAAAATTTCCTAAAAAAAACAGTGATATTCAATGTGCAAATAAATAATTAAAATCGTCAATCTCCATAATTTCTAAATGTTAAAATTTAAATATTAGAATAACGTAAACCTCTAATTTCAAAGGGCTTTTTATTTATCATATAATAATGATGACAATAATAATAATTGAACCCGTGTAGCCAACAGGGGGAAATTTCTTCCCGCTCGCACCCCCATCCCTTGTGTAATTGAAGATTCCCAACCCTGCAAAAGTTTGACAATCATGGTGTGGGAATCAAACCAATCTGCTTGAATTTGCATATGGTTTAGAGCTCGTAAGTTTGAAAATATCAGTAAATGCTTTAGGTTCCCCAGCATATTACGTGATGGTAGAATGTGGAAATCATGAACGTAGAACAAGAGTATCATCAGGTTAGCTCCTCCTTGCCCATTTCTCCCATGGTAATTTCGAATGCTTTCACGAGGTCAGGGCTTTGATTGTGTTCTGTGAACATAGGTAAACATGAATTTGCTTGTTGGAATGAGAAGTTTTCATTTGAACTCCCTACATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATGGAAACAAAATTGCTGAACAATGAAACCGTCGGAGCTACCGTGTATGAATCTTCTTTTTCTATGTAGAACTTTTATACTTCTACTCATTGAAGCCTTATTTTTTATGTTTTTCATGTTCCAACTTGAACATAGCAGAATCCACCTTGGTGGAATAATTTCAGAGGGTTATGAAAGAGGATTCATAGAAGTTAGGCCAGCTCCATACAACGTGGTGCTCGAGGACGACGACACTTACAAGGGAGAAATAAAAGTAGGATTCAAATTCTTCACCAAAGTAAGATGCATATATTAATCTCGTTATATCCATCAAATAGTTATAATTATTATTGTAAGTTATTGCAATTTCTTTACTTTTCCAGGAAGAAATAACACTAATGGAAGCAAGAGAGTTACTTGCAGATGGGAAGCAGCAAAGAAAACCTATCTGCAGCGAAGTTATGAACTTGTGGAGAATTGTATGGTTAAAGTTATTGTGCCTCATTGGCCACAAGAATTCTTCCAGTGAACGAAAGCAACAGTAA

mRNA sequence

ATGCGTGATATTGGGATCGTCTGGAAGTTGTTTTATCAGATACCTTACAAGGATGTTGTTTTGTGGAGTGTCATGATCTCAGCATGCGTGAAAAATGGTCAGTATAATGAAGCATTTGATATTTTCAGAGAGATGCAAAATCAGGGAGGTTCAACCAAACCAAGTTCCCCAGCATATTACGTGATGGTAGAATGTGGAAATCATGAACGTAGAACAAGAGTATCATCAGGTAAACATGAATTTGCTTGTTGGAATGAGAAGTTTTCATTTGAACTCCCTACATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATGGAAACAAAATTGCTGAACAATGAAACCGTCGGAGCTACCGTAATCCACCTTGGTGGAATAATTTCAGAGGGTTATGAAAGAGGATTCATAGAAGTTAGGCCAGCTCCATACAACGTGGTGCTCGAGGACGACGACACTTACAAGGGAGAAATAAAAGTAGGATTCAAATTCTTCACCAAAGAAGAAATAACACTAATGGAAGCAAGAGAGTTACTTGCAGATGGGAAGCAGCAAAGAAAACCTATCTGCAGCGAAGTTATGAACTTGTGGAGAATTGTATGGTTAAAGTTATTGTGCCTCATTGGCCACAAGAATTCTTCCAGTGAACGAAAGCAACAGTAA

Coding sequence (CDS)

ATGCGTGATATTGGGATCGTCTGGAAGTTGTTTTATCAGATACCTTACAAGGATGTTGTTTTGTGGAGTGTCATGATCTCAGCATGCGTGAAAAATGGTCAGTATAATGAAGCATTTGATATTTTCAGAGAGATGCAAAATCAGGGAGGTTCAACCAAACCAAGTTCCCCAGCATATTACGTGATGGTAGAATGTGGAAATCATGAACGTAGAACAAGAGTATCATCAGGTAAACATGAATTTGCTTGTTGGAATGAGAAGTTTTCATTTGAACTCCCTACATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATGGAAACAAAATTGCTGAACAATGAAACCGTCGGAGCTACCGTAATCCACCTTGGTGGAATAATTTCAGAGGGTTATGAAAGAGGATTCATAGAAGTTAGGCCAGCTCCATACAACGTGGTGCTCGAGGACGACGACACTTACAAGGGAGAAATAAAAGTAGGATTCAAATTCTTCACCAAAGAAGAAATAACACTAATGGAAGCAAGAGAGTTACTTGCAGATGGGAAGCAGCAAAGAAAACCTATCTGCAGCGAAGTTATGAACTTGTGGAGAATTGTATGGTTAAAGTTATTGTGCCTCATTGGCCACAAGAATTCTTCCAGTGAACGAAAGCAACAGTAA

Protein sequence

MRDIGIVWKLFYQIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGGSTKPSSPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNNETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLMEARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERKQQ

Homology

[Close]

BLAST of Cla021238 vs. Swiss-Prot
Match: ERG3_ORYSI (Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica GN=ERG3 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-07
Identity = 36/112 (32.14%), Postives = 59/112 (52.68%), Query Frame = 1


Query: 60  YVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKL-LNNETV 119
           Y +++C + E+++ V+SGK     WNE F F +      N T +  ++M++    +++ V
Sbjct: 28  YAVLKCRSQEQKSSVASGKGSDPEWNETFMFSVT----HNATELIIKLMDSDSGTDDDFV 87

Query: 120 GATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEE 171
           G   I L  I +EG       + P  YNVV E++  Y+GEIKVG  F  +++
Sbjct: 88  GEATISLEAIYTEG------SIPPTVYNVVKEEE--YRGEIKVGLTFTPEDD 127

[Close]

BLAST of Cla021238 vs. Swiss-Prot
Match: ERG3_ORYSJ (Elicitor-responsive protein 3 OS=Oryza sativa subsp. japonica GN=ERG3 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-07
Identity = 36/112 (32.14%), Postives = 59/112 (52.68%), Query Frame = 1


Query: 60  YVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKL-LNNETV 119
           Y +++C + E+++ V+SGK     WNE F F +      N T +  ++M++    +++ V
Sbjct: 28  YAVLKCRSQEQKSSVASGKGSDPEWNETFMFSVT----HNATELIIKLMDSDSGTDDDFV 87

Query: 120 GATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEE 171
           G   I L  I +EG       + P  YNVV E++  Y+GEIKVG  F  +++
Sbjct: 88  GEATISLEAIYTEG------SIPPTVYNVVKEEE--YRGEIKVGLTFTPEDD 127

[Close]

BLAST of Cla021238 vs. TrEMBL
Match: A0A0A0L8X2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122400 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.0e-78
Identity = 140/166 (84.34%), Postives = 153/166 (92.17%), Query Frame = 1


Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 115
           SPAYYV VECGNHERRT+VSSGKHE ACWNEKFSFELPTSDW NITHIKFRIMETKLLNN
Sbjct: 22  SPAYYVTVECGNHERRTKVSSGKHEHACWNEKFSFELPTSDWNNITHIKFRIMETKLLNN 81

Query: 116 ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLME 175
           E+VGATVIHLGGI+SEGYERG IEV PAPYNVVLE+D+TYKGEIK+GFKFFTKEEI L E
Sbjct: 82  ESVGATVIHLGGIVSEGYERGLIEVLPAPYNVVLEEDNTYKGEIKIGFKFFTKEEIALTE 141

Query: 176 ARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERKQQ 222
           ARE +ADGK QR+PICS+++NLWRIVWLKL C I HKNSSS +K+Q
Sbjct: 142 ARESIADGKLQRQPICSKILNLWRIVWLKLSCFIDHKNSSSGQKKQ 187

[Close]

BLAST of Cla021238 vs. TrEMBL
Match: A0A061DT98_THECC (Calcium-dependent lipid-binding (CaLB domain) family protein, putative OS=Theobroma cacao GN=TCM_005332 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.9e-42
Identity = 87/165 (52.73%), Postives = 114/165 (69.09%), Query Frame = 1


Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLL-N 115
           +PAYYV+++CG  E R++VS GKHE   WNEKF FE P S+W+N+THI FRIM+ +   +
Sbjct: 24  TPAYYVILQCGTQEYRSKVSPGKHEKVLWNEKFKFEFPQSEWENLTHITFRIMDKEFFTD 83

Query: 116 NETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLM 175
           N  VG T+IHLGGII+EG +R FIE+RPAPYNVVLE DDTYKG+IK+GFKF   +E+   
Sbjct: 84  NGFVGKTIIHLGGIIAEGTDREFIELRPAPYNVVLE-DDTYKGQIKIGFKFIAHKEM--- 143

Query: 176 EARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERK 220
             +E      + R+  CS + NLW+  W K L L   + S +E K
Sbjct: 144 --QEFALLPNEPRRSFCSSIRNLWKFPWWKFLFLYVQRKSKNEHK 182

[Close]

BLAST of Cla021238 vs. TrEMBL
Match: B9RDS2_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1615260 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.4e-37
Identity = 80/149 (53.69%), Postives = 102/149 (68.46%), Query Frame = 1


Query: 57  PAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNNE 116
           PAYYV+ +CGN    ++VSSGK + ACWNEKF FE P  DWK +TH+KFRIM+ +   + 
Sbjct: 588 PAYYVITQCGNRVHESKVSSGKDQEACWNEKFRFEFPLIDWKRMTHLKFRIMDKEFFTDS 647

Query: 117 -TVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLME 176
             VG T+I+LGGII+EG  +G +EV+PAPYNVVLE DDTYKGEIK+G  F   EE   ME
Sbjct: 648 GFVGETIIYLGGIIAEGINKGILEVKPAPYNVVLE-DDTYKGEIKIGLNFIINEEED-ME 707

Query: 177 ARELLADGKQQRKPICSEVMNLWRIVWLK 205
            RE +A   + R      +MNL +  WL+
Sbjct: 708 TREFVAPLNEPRPSFFRSIMNLLKSSWLR 734

[Close]

BLAST of Cla021238 vs. TrEMBL
Match: B9RDS2_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1615260 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.3e-04
Identity = 26/47 (55.32%), Postives = 29/47 (61.70%), Query Frame = 1


Query: 3   DIGIVWKLFYQIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQG 50
           D  I  KLF Q  + DVVLWS M+SACVKN +Y E    FR M N G
Sbjct: 59  DFEISLKLFDQKLHNDVVLWSAMVSACVKNAKYREGVQHFRRMLNYG 105

HSP 2 Score: 43.5 bits (101), Expect = 3.9e-01
Identity = 17/40 (42.50%), Postives = 28/40 (70.00%), Query Frame = 1


Query: 8   WKLFYQIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQN 48
           W +F Q+ YKD++ WS MIS   + G+  +A +I+R+MQ+
Sbjct: 266 WLVFDQLNYKDLIAWSAMISVYARGGKPYDALNIYRQMQS 305

HSP 3 Score: 34.7 bits (78), Expect = 1.8e+02
Identity = 16/37 (43.24%), Postives = 23/37 (62.16%), Query Frame = 1


Query: 10  LFYQIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQ 47
           +F +I  KD++ W  +I  CV+N    EA DIF +MQ
Sbjct: 167 IFNRICEKDLISWRTVIRICVENECPREALDIFLKMQ 203

HSP 4 Score: 161.8 bits (408), Expect = 9.7e-37
Identity = 77/165 (46.67%), Postives = 115/165 (69.70%), Query Frame = 1


Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLL-N 115
           SP YYV+++CG  E R+++S G ++ A WN+KF F+ P   WK +THIK RIM+ +L  +
Sbjct: 546 SPVYYVLLQCGTKEYRSKMSKGDNDNALWNQKFVFDFPMYQWKKLTHIKVRIMDKELFKD 605

Query: 116 NETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLM 175
              VG T+IHLGGII+EG +RG+IEV+PAPYNVVL DDDT+KGE+K+GF+F   +++ + 
Sbjct: 606 GGFVGETIIHLGGIITEGRDRGYIEVKPAPYNVVL-DDDTFKGELKLGFRFTAADKLHIN 665

Query: 176 EARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERK 220
           +A E+  +GK   +P+ S V+NL ++  L+ L     K +  + K
Sbjct: 666 KAWEVKIEGKNSEEPMISPVLNLMKLPLLRFLIYCFRKTTKYQLK 709

[Close]

BLAST of Cla021238 vs. TrEMBL
Match: A0A078EYN7_BRANA (BnaCnng02300D protein OS=Brassica napus GN=BnaCnng02300D PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.4e-35
Identity = 77/166 (46.39%), Postives = 117/166 (70.48%), Query Frame = 1


Query: 56  SPAYYVMVECGNHERRTRVS-SGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLN 115
           SP YYV+++CG  E R+++S +G ++ A WN+KF F+ P   WK +THIK RIM+ +L  
Sbjct: 27  SPVYYVLLQCGTKEYRSKMSKAGDNDNALWNQKFVFDFPMYQWKKLTHIKVRIMDKELFK 86

Query: 116 NET-VGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITL 175
           +   VG T+IHLGGII+EG +RG+IEV+PAPYNVVL DDDT+KGE+K+GF+F   +++ +
Sbjct: 87  DGGFVGETIIHLGGIITEGRDRGYIEVKPAPYNVVL-DDDTFKGELKLGFRFTAADKLHI 146

Query: 176 MEARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERK 220
            +A E+  +GK + +P+ S V+NL ++  L+ L     K +  + K
Sbjct: 147 NKAWEVKIEGKNREEPMISPVLNLMKLPLLRFLIYCFRKTTKYQLK 191

[Close]

BLAST of Cla021238 vs. NCBI nr
Match: gi|659077727|ref|XP_008439351.1| (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g01580 [Cucumis melo])

HSP 1 Score: 312.8 bits (800), Expect = 4.9e-82
Identity = 147/166 (88.55%), Postives = 155/166 (93.37%), Query Frame = 1


Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 115
           SPAYYV VECGNHE RT+VSSGKHE ACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN
Sbjct: 660 SPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 719

Query: 116 ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLME 175
           E+VGATVIHLGGI+SEGYERGFIEVRPAPYNVVLE+D+TYKGEIK+GFKFF KEEI LME
Sbjct: 720 ESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEEIALME 779

Query: 176 ARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERKQQ 222
           ARE +ADGK QRKPICS+ MNLWRIVWLKL C IGHKNSSSERK Q
Sbjct: 780 ARESIADGKLQRKPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ 825

[Close]

BLAST of Cla021238 vs. NCBI nr
Match: gi|659077727|ref|XP_008439351.1| (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g01580 [Cucumis melo])

HSP 1 Score: 81.6 bits (200), Expect = 1.8e-12
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 1


Query: 1   MRDIGIVWKLFYQIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQG 50
           +RDI  VWKLF QIP KDVV WS +ISACVKNGQY+EAFD+ REMQ+QG
Sbjct: 133 IRDIETVWKLFNQIPCKDVVFWSAIISACVKNGQYSEAFDLLREMQDQG 181

HSP 2 Score: 299.7 bits (766), Expect = 4.3e-78
Identity = 140/166 (84.34%), Postives = 153/166 (92.17%), Query Frame = 1


Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 115
           SPAYYV VECGNHERRT+VSSGKHE ACWNEKFSFELPTSDW NITHIKFRIMETKLLNN
Sbjct: 22  SPAYYVTVECGNHERRTKVSSGKHEHACWNEKFSFELPTSDWNNITHIKFRIMETKLLNN 81

Query: 116 ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLME 175
           E+VGATVIHLGGI+SEGYERG IEV PAPYNVVLE+D+TYKGEIK+GFKFFTKEEI L E
Sbjct: 82  ESVGATVIHLGGIVSEGYERGLIEVLPAPYNVVLEEDNTYKGEIKIGFKFFTKEEIALTE 141

Query: 176 ARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERKQQ 222
           ARE +ADGK QR+PICS+++NLWRIVWLKL C I HKNSSS +K+Q
Sbjct: 142 ARESIADGKLQRQPICSKILNLWRIVWLKLSCFIDHKNSSSGQKKQ 187

[Close]

BLAST of Cla021238 vs. NCBI nr
Match: gi|1009163052|ref|XP_015899757.1| (PREDICTED: elicitor-responsive protein 3 [Ziziphus jujuba])

HSP 1 Score: 183.7 bits (465), Expect = 3.4e-43
Identity = 89/167 (53.29%), Postives = 124/167 (74.25%), Query Frame = 1


Query: 57  PAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLL-NN 116
           PAYYV++ECG H  R+++S GK E ACWNEKF+FELP SDWKN+TH+KFRIM+T+L  + 
Sbjct: 27  PAYYVLIECGAHIFRSKMSRGKDEKACWNEKFTFELPFSDWKNLTHLKFRIMDTELFTDG 86

Query: 117 ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFT----KEEI 176
             VG ++I+LGGI+ EGYERG IE++PAPYNVVLE DDTYKG+IKVG KF T    ++++
Sbjct: 87  GFVGDSIIYLGGIVREGYERGTIEIKPAPYNVVLE-DDTYKGQIKVGIKFTTNLSIQKDM 146

Query: 177 TLMEARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSER 219
            +++  E +A   + RK +CS ++NLWR +  + L L   K+   ++
Sbjct: 147 HIIDTMEEIAKENKPRKSMCSSIINLWRFLRSRSLVLCKRKHYRKQK 192

[Close]

BLAST of Cla021238 vs. NCBI nr
Match: gi|590722120|ref|XP_007051808.1| (Calcium-dependent lipid-binding (CaLB domain) family protein, putative [Theobroma cacao])

HSP 1 Score: 179.1 bits (453), Expect = 8.5e-42
Identity = 87/165 (52.73%), Postives = 114/165 (69.09%), Query Frame = 1


Query: 56  SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLL-N 115
           +PAYYV+++CG  E R++VS GKHE   WNEKF FE P S+W+N+THI FRIM+ +   +
Sbjct: 24  TPAYYVILQCGTQEYRSKVSPGKHEKVLWNEKFKFEFPQSEWENLTHITFRIMDKEFFTD 83

Query: 116 NETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLM 175
           N  VG T+IHLGGII+EG +R FIE+RPAPYNVVLE DDTYKG+IK+GFKF   +E+   
Sbjct: 84  NGFVGKTIIHLGGIIAEGTDREFIELRPAPYNVVLE-DDTYKGQIKIGFKFIAHKEM--- 143

Query: 176 EARELLADGKQQRKPICSEVMNLWRIVWLKLLCLIGHKNSSSERK 220
             +E      + R+  CS + NLW+  W K L L   + S +E K
Sbjct: 144 --QEFALLPNEPRRSFCSSIRNLWKFPWWKFLFLYVQRKSKNEHK 182

[Close]

BLAST of Cla021238 vs. NCBI nr
Match: gi|823208671|ref|XP_012437712.1| (PREDICTED: elicitor-responsive protein 3 isoform X3 [Gossypium raimondii])

HSP 1 Score: 173.7 bits (439), Expect = 3.6e-40
Identity = 90/167 (53.89%), Postives = 116/167 (69.46%), Query Frame = 1


Query: 57  PAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLL-NN 116
           PAYYV+++CG  E RT++S GKH+   WNEKF F+ P S+WKN+THIKFRIM+ +   NN
Sbjct: 25  PAYYVILQCGTKEYRTKISPGKHKKVLWNEKFKFDFPLSEWKNLTHIKFRIMDKEFFKNN 84

Query: 117 ETVGATVIHLGGIISEGYERGFIEVRPAPYNVVLEDDDTYKGEIKVGFKFFTKEEITLME 176
             VG T IHLGGII EG ++GFI VRPAPYNVVLE DDTYKG+IK+GFKF  K+E+   E
Sbjct: 85  GFVGETRIHLGGIIIEGTDKGFIVVRPAPYNVVLE-DDTYKGQIKIGFKFIAKKEVQ-NE 144

Query: 177 ARELLADGKQQRKPICSEVMNLWRI-VWLKLLCLIGHKNSSSERKQQ 222
            RE      + R  ICS + NLW+   W   +CL   K  +S+++ +
Sbjct: 145 IREFAVMPNEPRS-ICSCIKNLWKFPCW---ICLYPFKQENSKKEHK 185

The following BLAST results are available for this feature:

BLAST of Cla021238 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERG3_ORYSI	1.8e-07	32.14	Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica GN=ERG3 PE=2 SV=1	[more]
ERG3_ORYSJ	1.8e-07	32.14	Elicitor-responsive protein 3 OS=Oryza sativa subsp. japonica GN=ERG3 PE=2 SV=1	[more]

BLAST of Cla021238 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8X2_CUCSA	3.0e-78	84.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122400 PE=4 SV=1	[more]
A0A061DT98_THECC	5.9e-42	52.73	Calcium-dependent lipid-binding (CaLB domain) family protein, putative OS=Theobr...	[more]
B9RDS2_RICCO	4.4e-37	53.69	Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO...	[more]
B9RDS2_RICCO	8.3e-04	55.32	Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO...	[more]
A0A078EYN7_BRANA	1.4e-35	46.39	BnaCnng02300D protein OS=Brassica napus GN=BnaCnng02300D PE=4 SV=1	[more]

BLAST of Cla021238 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077727\|ref\|XP_008439351.1\|	4.9e-82	88.55	PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro...	[more]
gi\|659077727\|ref\|XP_008439351.1\|	1.8e-12	75.51	PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro...	[more]
gi\|1009163052\|ref\|XP_015899757.1\|	3.4e-43	53.29	PREDICTED: elicitor-responsive protein 3 [Ziziphus jujuba]	[more]
gi\|590722120\|ref\|XP_007051808.1\|	8.5e-42	52.73	Calcium-dependent lipid-binding (CaLB domain) family protein, putative [Theobrom...	[more]
gi\|823208671\|ref\|XP_012437712.1\|	3.6e-40	53.89	PREDICTED: elicitor-responsive protein 3 isoform X3 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom
IPR002885	Pentatricopeptide_repeat

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla021238	Cla021238.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	GENE3D	G3DSA:2.60.40.150		coord: 55..166 score: 7.
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 54..131 score: 4.
IPR000008	C2 domain	unknown	SSF49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 55..174 score: 1.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 17..63 score: 1.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 20..49 score: 8.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 18..52 score: 11
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 1..49 score: 2.0
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..29 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla021238	Cla97C05G081930	Watermelon (97103) v2	wmwmbB206
Cla021238	Csa3G122400	Cucumber (Chinese Long) v2	cuwmB233
Cla021238	MELO3C006112	Melon (DHL92) v3.5.1	mewmB461
Cla021238	ClCG05G001540	Watermelon (Charleston Gray)	wcgwmB286
Cla021238	CSPI03G08800	Wild cucumber (PI 183967)	cpiwmB231
Cla021238	Cucsa.258350	Cucumber (Gy14) v1	cgywmB479
Cla021238	CmaCh14G020370	Cucurbita maxima (Rimu)	cmawmB242
Cla021238	CmaCh06G010650	Cucurbita maxima (Rimu)	cmawmB802
Cla021238	CmoCh14G020970	Cucurbita moschata (Rifu)	cmowmB231
Cla021238	CmoCh06G010870	Cucurbita moschata (Rifu)	cmowmB794
Cla021238	Lsi05G020360	Bottle gourd (USVL1VR-Ls)	lsiwmB365
Cla021238	Cp4.1LG03g16730	Cucurbita pepo (Zucchini)	cpewmB613
Cla021238	Cp4.1LG08g01180	Cucurbita pepo (Zucchini)	cpewmB844
Cla021238	CsGy3G008890	Cucumber (Gy14) v2	cgybwmB217
Cla021238	MELO3C006112.2	Melon (DHL92) v3.6.1	medwmB447
Cla021238	Carg24643	Silver-seed gourd	carwmB0378
Cla021238	Carg21003	Silver-seed gourd	carwmB0487
Cla021238	CsaV3_3G008920	Cucumber (Chinese Long) v3	cucwmB239
Cla021238	Bhi01G000256	Wax gourd	wgowmB204

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla021238	Cucurbita maxima (Rimu)	cmawmB798
Cla021238	Cucurbita moschata (Rifu)	cmowmB793
Cla021238	Melon (DHL92) v3.5.1	mewmB470
Cla021238	Cucurbita pepo (Zucchini)	cpewmB845
Cla021238	Watermelon (97103) v1	wmwmB118