CmoCh14G020970 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh14G020970
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Calcium-dependent lipid-binding (CaLB domain) family protein, putative
Location	Cmo_Chr14 : 15209443 .. 15211715 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGGAATGCGATGCGAGGTTAACTCTCTTCTCCTCACTCTCTGAATTCCGCTGGTTTTGCATTTCATTCTGTGGGAACGATCCTCAAGCTTTTGTCAATGGAACAAAGATTTGGTATTGATATTATGTTGTGCTTTTCGCGATGTGCACGCAACCTGTTTGTCAAAAGTCCCAAGAGAAAAATTTATACGATGCGTCCTATGATCGATGCTTCTTCAACCAAAATTTCATGCTCAACTAGAGGACGTAATATCTTTGACGACTATATCATTGATTTTGGTAAGAACAGGACAGCCAGAATCTGTTTTTGCCTTCTTCAAGATGATGCTCGCAAATGGGCTCAGGCCAAATCATGTGATGATGCTGAGCGTAATAAGAGCTATTGATGCGTTAAGCTGGGATTCAATGATTGAAGGTTGTGCATGGAGGAGTTATCCAAATGGGTTTTATGTTAGAAGTAGCAGGATTTCGTTAGCCGTTCTTGGGTTTTATACAATGCGTGGAGTGCCATGATCATGGCATTCTTGAAATATGGTCAGCATAGTGAAGCTTTGGATCTTTTCAGAGGGATGCACAATCAGGGAGCTCAGCTAAACATGTAAGCATTGTAAGAATTCTACCTGCTTGTGCTGATTTTTGTGTTTTTGTGAGATCCCACGTCGGTTGGAGAGAGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAACCGTGAGGCTGACAGCGATATGTAACGGGGTCAGCCGATATGTAACGGGCCAAAATGGACAATATCTACCGACAGTGGACTTGAACTAGTAGAATGGTATCAGAGCCAGACACCGGGCGGTGTGCCAGCGGGAACGTTAGACCCCAAGGGAGTGGATTGTGAGATCCTACATCGGGTGGAGAAGGGAACGAAGCATTCCTTGTAAGAGTGTGTAAACTCATCCAATTGAAAAACTGATGGATGGAGGGAAATTTATCAGGTAACTCATACAGCTGAGTAGTAACTTCAACGCATCCATGTTATTGATGATCATTGAATTCCATTAAATGGTCTGAGTTATCTTGAATTTCAATGGAATTGATGGTCTTGGTAGTTTTTTATTTACTTGAAACATCACCACTCCATAACATAACCTATCTATTTATGCTCTTGCTACTTCAACCTATCCAATACGTAAAATTCATGAAGGGTGGGATTCTTGAAGTGCTTCTTGTCAATGCCAGAGACATCAAACACACCAATCTGTTTGGTATTATCTTCTCTTATAGACTTGTTCTTAATGTTAACTCGGGTTGAGCCTCAACCCGAGAAGTACTTTTTGTCTGTTTAGAGCATTTTTTGATCTGTTGACCTTTAAAATGATTATTAGCGTCTTATTCATATGCTCGGATTTGCTTCTTGTTTTAGGTTCCCGGGCATATTATGTGATGGTAGAATGTGGAAATCATGAACACAGAACAAAAGTATCATCAGGTTGGCTCCCCTCTGCTCTTTTCTCGTATGGTAATTTGTAATGCTTCCATGGTCAGGGCTTTCACTATGTTCTGTGGACACAGGTAAACATGAGAAGGTTTGTTGGAATGAGAAGTTTTCATTTGAACTCCCTTCATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATGCAAACAAAATTTCTGAGCAATGAATCTGTTGGTACAATAGTGTATGAATCTTTCATACCTCTGCTTATTTCTTTGAGCAAAAATTTTCTCTATGTTTACATATTTCGACACGAAAATAGCAGAATCCACCTTGGTGGAATAATTTCAGAGGGATACGAAAGAGGATTCATAGAAGTTCGGCCAGCTCCATACAACGTCGTGCTCGAGGAGGACGACACTTACAAAGGAGAAATAAAGATAGGATTCAAATTTTTCACCAAAGTAAGATTTATATACAAAATTTCATTGTATCCATCAGAATAGTTTTTCTTGTAAGTTACTGCAATCTCTACACTTGTTCAGGAAGAAATAGTTCAGATGGAAGCAAGAGAGTTCATTGCAGATGTGAAGCAGGAAAGGAAACCGATCTATGGCAAGGTTATGAACTTGTGGACAAATGTATGGTTAAAGTTGTTGTGCCTCTTTGGCCACAAGAAATTTTCCAGTGGTCGAAAACAACAGTGAACTCATGAAATATTATGTCGGGTCGAAAACAACATTTTCAGTTTCTATTTGGGTTTTCTTCTTCGTAATAAAAAAGATGTCCGATGGATCATATTGCATTCAAA

mRNA sequence

ATGGTTGGAATGCGATGCGAGGATTTCGTTAGCCGTTCTTGGGTTTTATACAATGCGTGGAGTGCCATGATCATGGCATTCTTGAAATATGGTCAGCATAGTAAACATGAGAAGGTTTGTTGGAATGAGAAGTTTTCATTTGAACTCCCTTCATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATGCAAACAAAATTTCTGAGCAATGAATCTGTTGGTACAATAGTAATCCACCTTGGTGGAATAATTTCAGAGGGATACGAAAGAGGATTCATAGAAGTTCGGCCAGCTCCATACAACGTCGTGCTCGAGGAGGACGACACTTACAAAGGAGAAATAAAGATAGGATTCAAATTTTTCACCAAAGAAGAAATAGTTCAGATGGAAGCAAGAGAGTTCATTGCAGATGTGAAGCAGGAAAGGAAACCGATCTATGGCAAGGTTATGAACTTGTGGACAAATGTATGGTTAAAGTTGTTGTGCCTCTTTGGCCACAAGAAATTTTCCAGTGGTCGAAAACAACAGTGAACTCATGAAATATTATGTCGGGTCGAAAACAACATTTTCAGTTTCTATTTGGGTTTTCTTCTTCGTAATAAAAAAGATGTCCGATGGATCATATTGCATTCAAA

Coding sequence (CDS)

ATGGTTGGAATGCGATGCGAGGATTTCGTTAGCCGTTCTTGGGTTTTATACAATGCGTGGAGTGCCATGATCATGGCATTCTTGAAATATGGTCAGCATAGTAAACATGAGAAGGTTTGTTGGAATGAGAAGTTTTCATTTGAACTCCCTTCATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATGCAAACAAAATTTCTGAGCAATGAATCTGTTGGTACAATAGTAATCCACCTTGGTGGAATAATTTCAGAGGGATACGAAAGAGGATTCATAGAAGTTCGGCCAGCTCCATACAACGTCGTGCTCGAGGAGGACGACACTTACAAAGGAGAAATAAAGATAGGATTCAAATTTTTCACCAAAGAAGAAATAGTTCAGATGGAAGCAAGAGAGTTCATTGCAGATGTGAAGCAGGAAAGGAAACCGATCTATGGCAAGGTTATGAACTTGTGGACAAATGTATGGTTAAAGTTGTTGTGCCTCTTTGGCCACAAGAAATTTTCCAGTGGTCGAAAACAACAGTGA

Homology

[Close]

BLAST of CmoCh14G020970 vs. TrEMBL
Match: A0A0A0L8X2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122400 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.1e-57
Identity = 109/144 (75.69%), Postives = 120/144 (83.33%), Query Frame = 1


Query: 35  KHEKVCWNEKFSFELPSSDWKNITHIKFRIMQTKFLSNESVGTIVIHLGGIISEGYERGF 94
           KHE  CWNEKFSFELP+SDW NITHIKFRIM+TK L+NESVG  VIHLGGI+SEGYERG 
Sbjct: 44  KHEHACWNEKFSFELPTSDWNNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGL 103

Query: 95  IEVRPAPYNVVLEEDDTYKGEIKIGFKFFTKEEIVQMEAREFIADVKQERKPIYGKVMNL 154
           IEV PAPYNVVLEED+TYKGEIKIGFKFFTKEEI   EARE IAD K +R+PI  K++NL
Sbjct: 104 IEVLPAPYNVVLEEDNTYKGEIKIGFKFFTKEEIALTEARESIADGKLQRQPICSKILNL 163

Query: 155 WTNVWLKLLCLFGHKKFSSGRKQQ 179
           W  VWLKL C   HK  SSG+K+Q
Sbjct: 164 WRIVWLKLSCFIDHKNSSSGQKKQ 187

[Close]

BLAST of CmoCh14G020970 vs. TrEMBL
Match: A0A061DT98_THECC (Calcium-dependent lipid-binding (CaLB domain) family protein, putative OS=Theobroma cacao GN=TCM_005332 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.8e-33
Identity = 77/143 (53.85%), Postives = 94/143 (65.73%), Query Frame = 1


Query: 35  KHEKVCWNEKFSFELPSSDWKNITHIKFRIMQTKFLS-NESVGTIVIHLGGIISEGYERG 94
           KHEKV WNEKF FE P S+W+N+THI FRIM  +F + N  VG  +IHLGGII+EG +R 
Sbjct: 46  KHEKVLWNEKFKFEFPQSEWENLTHITFRIMDKEFFTDNGFVGKTIIHLGGIIAEGTDRE 105

Query: 95  FIEVRPAPYNVVLEEDDTYKGEIKIGFKFFTKEEIVQMEAREFIADVKQERKPIYGKVMN 154
           FIE+RPAPYNVVL EDDTYKG+IKIGFKF     I   E +EF     + R+     + N
Sbjct: 106 FIELRPAPYNVVL-EDDTYKGQIKIGFKF-----IAHKEMQEFALLPNEPRRSFCSSIRN 165

Query: 155 LWTNVWLKLLCLFGHKKFSSGRK 177
           LW   W K L L+  +K  +  K
Sbjct: 166 LWKFPWWKFLFLYVQRKSKNEHK 182

[Close]

BLAST of CmoCh14G020970 vs. TrEMBL
Match: B9RDS2_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1615260 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.2e-31
Identity = 69/128 (53.91%), Postives = 89/128 (69.53%), Query Frame = 1


Query: 35  KHEKVCWNEKFSFELPSSDWKNITHIKFRIMQTKFLSNES-VGTIVIHLGGIISEGYERG 94
           K ++ CWNEKF FE P  DWK +TH+KFRIM  +F ++   VG  +I+LGGII+EG  +G
Sbjct: 609 KDQEACWNEKFRFEFPLIDWKRMTHLKFRIMDKEFFTDSGFVGETIIYLGGIIAEGINKG 668

Query: 95  FIEVRPAPYNVVLEEDDTYKGEIKIGFKFFTKEEIVQMEAREFIADVKQERKPIYGKVMN 154
            +EV+PAPYNVVL EDDTYKGEIKIG  F   EE   ME REF+A + + R   +  +MN
Sbjct: 669 ILEVKPAPYNVVL-EDDTYKGEIKIGLNFIINEE-EDMETREFVAPLNEPRPSFFRSIMN 728

Query: 155 LWTNVWLK 162
           L  + WL+
Sbjct: 729 LLKSSWLR 734

[Close]

BLAST of CmoCh14G020970 vs. TrEMBL
Match: W9RSW6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017277 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.9e-29
Identity = 70/143 (48.95%), Postives = 92/143 (64.34%), Query Frame = 1


Query: 37  EKVCWNEKFSFELPSSDWKNITHIKFRIMQTKFLSNES-VGTIVIHLGGIISEGYERGFI 96
           EK  WNEKF +E P SDWK  THIKFRIM  +  S+   VG  +I+LGGII+EG +RGF+
Sbjct: 26  EKTWWNEKFIYEFPLSDWKRFTHIKFRIMDKELFSDGGFVGETIIYLGGIITEGCDRGFL 85

Query: 97  EVRPAPYNVVLEEDDTYKGEIKIGFKFFTKEEIVQMEAREFIADVKQERK-PIYGKVMNL 156
           EV+PAPYNVVL EDDTYKG+IKIGFKF   ++I  +         ++E K     +++NL
Sbjct: 86  EVKPAPYNVVL-EDDTYKGQIKIGFKFIASKDIAHVPKTTTRQYTQEENKVEECSRIVNL 145

Query: 157 WTNVWLKLLCLFGHKKFSSGRKQ 178
           W  +W     +F  K+  +  KQ
Sbjct: 146 WRMLW--WWSMFSQKRIDTENKQ 165

[Close]

BLAST of CmoCh14G020970 vs. TrEMBL
Match: A0A0D2PTG2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G121500 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.9e-28
Identity = 64/97 (65.98%), Postives = 75/97 (77.32%), Query Frame = 1


Query: 35  KHEKVCWNEKFSFELPSSDWKNITHIKFRIMQTKFLSNES-VGTIVIHLGGIISEGYERG 94
           KH+KV WNEKF F+ P S+WKN+THIKFRIM  +F  N   VG   IHLGGII EG ++G
Sbjct: 46  KHKKVLWNEKFKFDFPLSEWKNLTHIKFRIMDKEFFKNNGFVGETRIHLGGIIIEGTDKG 105

Query: 95  FIEVRPAPYNVVLEEDDTYKGEIKIGFKFFTKEEIVQ 131
           FI VRPAPYNVVL EDDTYKG+IKIGFKF  K  +++
Sbjct: 106 FIVVRPAPYNVVL-EDDTYKGQIKIGFKFIAKVSLLR 141

[Close]

BLAST of CmoCh14G020970 vs. TAIR10
Match: AT4G00467.1 (AT4G00467.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 114.8 bits (286), Expect = 5.6e-26
Identity = 57/142 (40.14%), Postives = 87/142 (61.27%), Query Frame = 1


Query: 36  HEKVCWNEKFSFELPSSDWKNITHIKFRIMQTKFLSNES-VGTIVIHLGGIISEGYERGF 95
           ++   WN+KF F+ P S WK +T+IK RI+  +  ++   VG  +IHLGGII+EG +RG+
Sbjct: 47  NDNALWNQKFVFDFPMSQWKKLTYIKLRILDKELFNDGGFVGETIIHLGGIITEGRDRGY 106

Query: 96  IEVRPAPYNVVLEEDDTYKGEIKIGFKFFTKEEIVQMEAREFIADVKQERKPIYGKVMNL 155
           IE++PAPYNVVL EDDT+KGE+K+G +F   +++ Q +A E   + K   + +   + NL
Sbjct: 107 IEIKPAPYNVVL-EDDTFKGELKVGLRFIATDKL-QRKAWELKMEAKNSEELMISPIQNL 166

Query: 156 -------WTNVWLKLLCLFGHK 170
                  +   W +  CL   K
Sbjct: 167 MKLPLLRFIAAWARRQCLINAK 186

[Close]

BLAST of CmoCh14G020970 vs. NCBI nr
Match: gi|659077727|ref|XP_008439351.1| (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g01580 [Cucumis melo])

HSP 1 Score: 239.6 bits (610), Expect = 4.2e-60
Identity = 115/144 (79.86%), Postives = 121/144 (84.03%), Query Frame = 1


Query: 35  KHEKVCWNEKFSFELPSSDWKNITHIKFRIMQTKFLSNESVGTIVIHLGGIISEGYERGF 94
           KHE  CWNEKFSFELP+SDWKNITHIKFRIM+TK L+NESVG  VIHLGGI+SEGYERGF
Sbjct: 682 KHELACWNEKFSFELPTSDWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGF 741

Query: 95  IEVRPAPYNVVLEEDDTYKGEIKIGFKFFTKEEIVQMEAREFIADVKQERKPIYGKVMNL 154
           IEVRPAPYNVVLEED+TYKGEIKIGFKFF KEEI  MEARE IAD K +RKPI  K MNL
Sbjct: 742 IEVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRKPICSKAMNL 801

Query: 155 WTNVWLKLLCLFGHKKFSSGRKQQ 179
           W  VWLKL C  GHK  SS RK Q
Sbjct: 802 WRIVWLKLSCFIGHKNSSSERKTQ 825

[Close]

BLAST of CmoCh14G020970 vs. NCBI nr
Match: gi|700201383|gb|KGN56516.1| (hypothetical protein Csa_3G122400 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 1.5e-57
Identity = 109/144 (75.69%), Postives = 120/144 (83.33%), Query Frame = 1


Query: 35  KHEKVCWNEKFSFELPSSDWKNITHIKFRIMQTKFLSNESVGTIVIHLGGIISEGYERGF 94
           KHE  CWNEKFSFELP+SDW NITHIKFRIM+TK L+NESVG  VIHLGGI+SEGYERG 
Sbjct: 44  KHEHACWNEKFSFELPTSDWNNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGL 103

Query: 95  IEVRPAPYNVVLEEDDTYKGEIKIGFKFFTKEEIVQMEAREFIADVKQERKPIYGKVMNL 154
           IEV PAPYNVVLEED+TYKGEIKIGFKFFTKEEI   EARE IAD K +R+PI  K++NL
Sbjct: 104 IEVLPAPYNVVLEEDNTYKGEIKIGFKFFTKEEIALTEARESIADGKLQRQPICSKILNL 163

Query: 155 WTNVWLKLLCLFGHKKFSSGRKQQ 179
           W  VWLKL C   HK  SSG+K+Q
Sbjct: 164 WRIVWLKLSCFIDHKNSSSGQKKQ 187

[Close]

BLAST of CmoCh14G020970 vs. NCBI nr
Match: gi|590722120|ref|XP_007051808.1| (Calcium-dependent lipid-binding (CaLB domain) family protein, putative [Theobroma cacao])

HSP 1 Score: 150.6 bits (379), Expect = 2.6e-33
Identity = 77/143 (53.85%), Postives = 94/143 (65.73%), Query Frame = 1


Query: 35  KHEKVCWNEKFSFELPSSDWKNITHIKFRIMQTKFLS-NESVGTIVIHLGGIISEGYERG 94
           KHEKV WNEKF FE P S+W+N+THI FRIM  +F + N  VG  +IHLGGII+EG +R 
Sbjct: 46  KHEKVLWNEKFKFEFPQSEWENLTHITFRIMDKEFFTDNGFVGKTIIHLGGIIAEGTDRE 105

Query: 95  FIEVRPAPYNVVLEEDDTYKGEIKIGFKFFTKEEIVQMEAREFIADVKQERKPIYGKVMN 154
           FIE+RPAPYNVVL EDDTYKG+IKIGFKF     I   E +EF     + R+     + N
Sbjct: 106 FIELRPAPYNVVL-EDDTYKGQIKIGFKF-----IAHKEMQEFALLPNEPRRSFCSSIRN 165

Query: 155 LWTNVWLKLLCLFGHKKFSSGRK 177
           LW   W K L L+  +K  +  K
Sbjct: 166 LWKFPWWKFLFLYVQRKSKNEHK 182

[Close]

BLAST of CmoCh14G020970 vs. NCBI nr
Match: gi|823208665|ref|XP_012437710.1| (PREDICTED: elicitor-responsive protein 3 isoform X1 [Gossypium raimondii])

HSP 1 Score: 149.1 bits (375), Expect = 7.5e-33
Identity = 82/146 (56.16%), Postives = 101/146 (69.18%), Query Frame = 1


Query: 35  KHEKVCWNEKFSFELPSSDWKNITHIKFRIMQTKFLSNES-VGTIVIHLGGIISEGYERG 94
           KH+KV WNEKF F+ P S+WKN+THIKFRIM  +F  N   VG   IHLGGII EG ++G
Sbjct: 94  KHKKVLWNEKFKFDFPLSEWKNLTHIKFRIMDKEFFKNNGFVGETRIHLGGIIIEGTDKG 153

Query: 95  FIEVRPAPYNVVLEEDDTYKGEIKIGFKFFTKEEIVQMEAREFIADVKQERKPIYGKVMN 154
           FI VRPAPYNVVL EDDTYKG+IKIGFKF  K+E VQ E REF A +  E + I   + N
Sbjct: 154 FIVVRPAPYNVVL-EDDTYKGQIKIGFKFIAKKE-VQNEIREF-AVMPNEPRSICSCIKN 213

Query: 155 LWT-NVWLKLLCLFGHKKFSSGRKQQ 179
           LW    W   +CL+  K+ +S ++ +
Sbjct: 214 LWKFPCW---ICLYPFKQENSKKEHK 233

[Close]

BLAST of CmoCh14G020970 vs. NCBI nr
Match: gi|823208668|ref|XP_012437711.1| (PREDICTED: elicitor-responsive protein 3 isoform X2 [Gossypium raimondii])

HSP 1 Score: 149.1 bits (375), Expect = 7.5e-33
Identity = 82/146 (56.16%), Postives = 101/146 (69.18%), Query Frame = 1


Query: 35  KHEKVCWNEKFSFELPSSDWKNITHIKFRIMQTKFLSNES-VGTIVIHLGGIISEGYERG 94
           KH+KV WNEKF F+ P S+WKN+THIKFRIM  +F  N   VG   IHLGGII EG ++G
Sbjct: 56  KHKKVLWNEKFKFDFPLSEWKNLTHIKFRIMDKEFFKNNGFVGETRIHLGGIIIEGTDKG 115

Query: 95  FIEVRPAPYNVVLEEDDTYKGEIKIGFKFFTKEEIVQMEAREFIADVKQERKPIYGKVMN 154
           FI VRPAPYNVVL EDDTYKG+IKIGFKF  K+E VQ E REF A +  E + I   + N
Sbjct: 116 FIVVRPAPYNVVL-EDDTYKGQIKIGFKFIAKKE-VQNEIREF-AVMPNEPRSICSCIKN 175

Query: 155 LWT-NVWLKLLCLFGHKKFSSGRKQQ 179
           LW    W   +CL+  K+ +S ++ +
Sbjct: 176 LWKFPCW---ICLYPFKQENSKKEHK 195

The following BLAST results are available for this feature:

BLAST of CmoCh14G020970 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh14G020970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8X2_CUCSA	1.1e-57	75.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122400 PE=4 SV=1	[more]
A0A061DT98_THECC	1.8e-33	53.85	Calcium-dependent lipid-binding (CaLB domain) family protein, putative OS=Theobr...	[more]
B9RDS2_RICCO	2.2e-31	53.91	Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO...	[more]
W9RSW6_9ROSA	7.9e-29	48.95	Uncharacterized protein OS=Morus notabilis GN=L484_017277 PE=4 SV=1	[more]
A0A0D2PTG2_GOSRA	3.9e-28	65.98	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G121500 PE=4 SV=1	[more]

BLAST of CmoCh14G020970 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00467.1	5.6e-26	40.14	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]

BLAST of CmoCh14G020970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077727\|ref\|XP_008439351.1\|	4.2e-60	79.86	PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro...	[more]
gi\|700201383\|gb\|KGN56516.1\|	1.5e-57	75.69	hypothetical protein Csa_3G122400 [Cucumis sativus]	[more]
gi\|590722120\|ref\|XP_007051808.1\|	2.6e-33	53.85	Calcium-dependent lipid-binding (CaLB domain) family protein, putative [Theobrom...	[more]
gi\|823208665\|ref\|XP_012437710.1\|	7.5e-33	56.16	PREDICTED: elicitor-responsive protein 3 isoform X1 [Gossypium raimondii]	[more]
gi\|823208668\|ref\|XP_012437711.1\|	7.5e-33	56.16	PREDICTED: elicitor-responsive protein 3 isoform X2 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G020970.1	CmoCh14G020970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	GENE3D	G3DSA:2.60.40.150		coord: 40..123 score: 1.
IPR000008	C2 domain	unknown	SSF49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 40..133 score: 1.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh14G020970	CmaCh14G020370	Cucurbita maxima (Rimu)	cmacmoB245
CmoCh14G020970	Cla021238	Watermelon (97103) v1	cmowmB231
CmoCh14G020970	Csa3G122400	Cucumber (Chinese Long) v2	cmocuB239
CmoCh14G020970	MELO3C006112	Melon (DHL92) v3.5.1	cmomeB230
CmoCh14G020970	ClCG05G001540	Watermelon (Charleston Gray)	cmowcgB219
CmoCh14G020970	Lsi05G020370	Bottle gourd (USVL1VR-Ls)	cmolsiB233
CmoCh14G020970	Cp4.1LG03g16730	Cucurbita pepo (Zucchini)	cmocpeB245
CmoCh14G020970	MELO3C006112.2	Melon (DHL92) v3.6.1	cmomedB260
CmoCh14G020970	CsaV3_3G008920	Cucumber (Chinese Long) v3	cmocucB0283
CmoCh14G020970	Cla97C05G081930	Watermelon (97103) v2	cmowmbB243
CmoCh14G020970	Bhi01G000256	Wax gourd	cmowgoB0321
CmoCh14G020970	CsGy3G008890	Cucumber (Gy14) v2	cgybcmoB290
CmoCh14G020970	Carg21003	Silver-seed gourd	carcmoB0664

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh14G020970	Cucurbita moschata (Rifu)	cmocmoB194
CmoCh14G020970	Cucurbita moschata (Rifu)	cmocmoB201
CmoCh14G020970	Cucurbita moschata (Rifu)	cmocmoB223
CmoCh14G020970	Cucurbita moschata (Rifu)	cmocmoB224
CmoCh14G020970	Cucumber (Gy14) v1	cgycmoB0700
CmoCh14G020970	Cucurbita maxima (Rimu)	cmacmoB794
CmoCh14G020970	Cucurbita maxima (Rimu)	cmacmoB797
CmoCh14G020970	Wild cucumber (PI 183967)	cmocpiB242
CmoCh14G020970	Wild cucumber (PI 183967)	cmocpiB243
CmoCh14G020970	Watermelon (Charleston Gray)	cmowcgB216
CmoCh14G020970	Watermelon (97103) v1	cmowmB228
CmoCh14G020970	Cucurbita pepo (Zucchini)	cmocpeB261
CmoCh14G020970	Cucurbita pepo (Zucchini)	cmocpeB254
CmoCh14G020970	Silver-seed gourd	carcmoB0520
CmoCh14G020970	Cucumber (Chinese Long) v3	cmocucB0282