Carg21003 (gene) Silver-seed gourd

Overview
NameCarg21003
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionelicitor-responsive protein 3
LocationCucurbita_argyrosperma_scaffold_170 : 290454 .. 292686 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACAGCCAGAATCTGTTTTTGCCTTCTTCAAGATGATGCTCGCAAATGGGCTCAGGCCAAATCATGTGATGATGCTGAGCGTAATAAGAGCTATTGATGCGTTAAGCTGGGATTCAATGATTGAAGGTTGTGCATGGAGGAGTTATCCAAATGGGTTTTATGTTAGAAGTAGCAGGATTTCGTTAGCCGTTCTTGGGTTTTAATACAATGCGTGGAGTGCCATGATCATGGCATTCTTGAAATATGGTCGGCATAGTGAAGCTTTGGATCTTTTCAGAGGGATGCACAATCAGGGAGCTCCGCTAAACATGTAAGCATTGTAAGAATTCTACCTGTTTGTGCTGATTTTTGTGTTTTTGTGAGATCCCACGTCGGTTGGAGAGAGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACATGTTTTAAAACCATGAGGCTGACAGCAATATGTAACGAGCCAAAATGGACAATATCTATCAACGGTGGACTTGGACTATTACGAATGGTATCAGAGCCAGACACCGGGCGGTGTGCCAGCGGGAACGTTGGACCCCAAGGGAGTGGATTGTGAGATCCTACCTCGGGCGGAGAAGGGAACAAAGCATTCCTGGTAAGAGTGTAAACTTATCCAATTGAAAAACTGATGAATGCAGGGAAATTTATCAGGTAACTCATACAGCTGAGTAGTAACTTCAACGCATCCATGTTATTGATGATCATTGAATTCCATTAAATGGTCTGAGTTATCTTGAATTTCAATGGAATTGATGGTCTTGGTAGTTTTTTATTTACTTGAAACATCACCACTCCATAACATAACCTATCTATTTATGCTCTTGCTACTTCAACCTATCCAATACGTAAAATTCATGAAGGGTGGGATTCTTGAAGTGCTTCTTGTCAATGCCAGAGACATCAAACACACCAATCTGTTTGGTATTATCTTCTCTTATAGACTTGTTCTTAATGTTAACTCGGTTTGAGGCTCAACCCGAGAAGTACTTTTTGTCCGTTTAGAGCATTTTTTTGGTTTAACAATTGTAATAGTGGGTTTGATCTGTTGACCTTTGAAATGATTATTAGCGTCTTATTCATATTCATATGCTCGGATTTGCTTCTCGTTTTAGGTTCCCGGGCATTTTATGTGATGGTAGAATGTGGAAATCATGAACATAGAACAAAAGTATCATCAGGTTGGCTCCCCTCTGCCCTTTTCTCGTATGGTAATTTGTAATGCTTCCATGGTCAGGGCTTTCACTATGTTCTGTGGACACAGGTAAACATGAGAAGGTTTGTTGGAATGAGAAGTTTTCGTTTGAATTCCCTTCATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATGCAAACAAAATTTCTGAGCAATGAATCTGTTGGTGCAATAGTGTATGAATCTTTCATGCTTCTGCTTATTTCTTTGAGCAAAAATTTTCTCCGTGTTTTACATATTTCGACACGAAAATAGCAGAATCCACCTTGGTGGAATAATTTCAGAGGGATACAAAAGAGGATTCATAGAAGTTCGGCCAGCTCCATACAACGTCGTGCTCGAGGAGGACGACACTTACAAGGGAGAAATAAAGATAGGATTCAAATTTTTCACCAAAGTAAGATTTATATACAAAATTTCATTGTATCCATCAGAATAGTTTTTCTTGTAAGTTACTGCAATCTCTACACTTCTTCAGGAAGAAATAGTTCAGATGGAAGCAAGAGAGTTCATTGCAGATGTGAAGCAGGAAAGGAAGCCGATCTATGGCAAGGTTATGAACTTGTGGACAAATGTATGGTTAAAGTTATTGTGCCTCTTTGGCCACAAGAATTTTTCCAGTGGTCGAAAACAACAGTGAAATGATATTATGTCGGGTCGAAAACAACATTTTCGGTTTCTATTCGAGTTTTCTCCTTCGTAATAAAAAAGATGTCCGATGGATCATATTGCATTCAAAGAGTTATTATGGTTCTCCTATCAACACTATAGGGGTGAGAGGTCAAACATCGACCACTTTACAATGATACTCTATCCACTAATCAATACTCGAATTAGAACAGACAATCAATATCAATTCATAAGCAACTGATATTTGGTCATTAGAAATTTATGTCCTTATTCTTTTTCAACAGATAAATTTGCATCATTCCATAATTCATATAATATAGTTTTTTTATAAATAATATTCATCATCCTCTTT

mRNA sequence

GACAGCCAGAATCTGTTTTTGCCTTCTTCAAGATGATGCTCGCAAATGGGCTCAGGCCAAATCATGTGATGATGCTGAGCGTAATAAGAGCTATTGATGCGTTAAGCTGGGATTCAATGATTGAAGGTTGTGCATGGAGGAGTTATCCAAATGGGTTTTATGGTGGGATTCTTGAAGTGCTTCTTGTCAATGCCAGAGACATCAAACACACCAATCTGTTTGGTTCCCGGGCATTTTATGTGATGGTAGAATGTGGAAATCATGAACATAGAACAAAAGTATCATCAGGTTGGCTCCCCTCTGCCCTTTTCTCGTATGGGCTTTCACTATGTTCTGTGGACACAGGTAAACATGAGAAGGTTTGTTGGAATGAGAAGTTTTCGTTTGAATTCCCTTCATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATGCAAACAAAATTTCTGAGCAATGAATCTGTTGGTGCAATAAATCCACCTTGGTGGAATAATTTCAGAGGGATACAAAAGAGGATTCATAGAAGTTCGGCCAGCTCCATACAACGTCGTGCTCGAGGAGGACGACACTTACAAGGGAGAAATAAAGATAGGATTCAAATTTTTCACCAAAGTAAGATTTATATACAAAATTTCATTGTATCCATCAGAATAGTTTTTCTTGTAAGTTACTGCAATCTCTACACTTCTTCAGGAAGAAATAGTTCAGATGGAAGCAAGAGAGTTCATTGCAGATGTGAAGCAGGAAAGGAAGCCGATCTATGGCAAGGTTATGAACTTGTGGACAAATGTATGGTTAAAGTTATTGTGCCTCTTTGGCCACAAGAATTTTTCCAGTGGTCGAAAACAACAGTGAAATGATATTATGTCGGGTCGAAAACAACATTTTCGGTTTCTATTCGAGTTTTCTCCTTCGTAATAAAAAAGATGTCCGATGGATCATATTGCATTCAAAGAGTTATTATGGTTCTCCTATCAACACTATAGGGGTGAGAGGTCAAACATCGACCACTTTACAATGATACTCTATCCACTAATCAATACTCGAATTAGAACAGACAATCAATATCAATTCATAAGCAACTGATATTTGGTCATTAGAAATTTATGTCCTTATTCTTTTTCAACAGATAAATTTGCATCATTCCATAATTCATATAATATAGTTTTTTTATAAATAATATTCATCATCCTCTTT

Coding sequence (CDS)

ATGATGCTCGCAAATGGGCTCAGGCCAAATCATGTGATGATGCTGAGCGTAATAAGAGCTATTGATGCGTTAAGCTGGGATTCAATGATTGAAGGTTGTGCATGGAGGAGTTATCCAAATGGGTTTTATGGTGGGATTCTTGAAGTGCTTCTTGTCAATGCCAGAGACATCAAACACACCAATCTGTTTGGTTCCCGGGCATTTTATGTGATGGTAGAATGTGGAAATCATGAACATAGAACAAAAGTATCATCAGGTTGGCTCCCCTCTGCCCTTTTCTCGTATGGGCTTTCACTATGTTCTGTGGACACAGGTAAACATGAGAAGGTTTGTTGGAATGAGAAGTTTTCGTTTGAATTCCCTTCATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATGCAAACAAAATTTCTGAGCAATGAATCTGTTGGTGCAATAAATCCACCTTGGTGGAATAATTTCAGAGGGATACAAAAGAGGATTCATAGAAGTTCGGCCAGCTCCATACAACGTCGTGCTCGAGGAGGACGACACTTACAAGGGAGAAATAAAGATAGGATTCAAATTTTTCACCAAAGTAAGATTTATATACAAAATTTCATTGTATCCATCAGAATAGTTTTTCTTGTAAGTTACTGCAATCTCTACACTTCTTCAGGAAGAAATAGTTCAGATGGAAGCAAGAGAGTTCATTGCAGATGTGAAGCAGGAAAGGAAGCCGATCTATGGCAAGGTTATGAACTTGTGGACAAATGTATGGTTAAAGTTATTGTGCCTCTTTGGCCACAAGAATTTTTCCAGTGGTCGAAAACAACAGTGAAATGA

Protein sequence

MMLANGLRPNHVMMLSVIRAIDALSWDSMIEGCAWRSYPNGFYGGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSNESVGAINPPWWNNFRGIQKRIHRSSASSIQRRARGGRHLQGRNKDRIQIFHQSKIYIQNFIVSIRIVFLVSYCNLYTSSGRNSSDGSKRVHCRCEAGKEADLWQGYELVDKCMVKVIVPLWPQEFFQWSKTTVK
Homology
[Close]
BLAST of Carg21003 vs. NCBI nr
Match: XP_023528824.1 (uncharacterized protein LOC111791648 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528825.1 uncharacterized protein LOC111791648 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528826.1 uncharacterized protein LOC111791648 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528827.1 uncharacterized protein LOC111791648 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528828.1 uncharacterized protein LOC111791648 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.2 bits (487), Expect = 2.4e-45
Identity = 92/106 (86.79%), Postives = 94/106 (88.68%), Query Frame = 0 

Query: 44  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVD 103
           GGILEV LVNARDIKHTNLFGSRA+YVMVECGNHEHRT+VSS          GLSLCSVD
Sbjct: 40  GGILEVFLVNARDIKHTNLFGSRAYYVMVECGNHEHRTRVSS----------GLSLCSVD 99

Query: 104 TGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSNESVGAI 150
           TGKHEKVCWNEKFSFE PSSDWKNITHIKFRIMQTKFLSNESVGAI
Sbjct: 100 TGKHEKVCWNEKFSFELPSSDWKNITHIKFRIMQTKFLSNESVGAI 135

[Close]
BLAST of Carg21003 vs. NCBI nr
Match: XP_022979209.1 (uncharacterized protein LOC111479016 isoform X1 [Cucurbita maxima] >XP_022979210.1 uncharacterized protein LOC111479016 isoform X1 [Cucurbita maxima] >XP_022979211.1 uncharacterized protein LOC111479016 isoform X1 [Cucurbita maxima] >XP_022979212.1 uncharacterized protein LOC111479016 isoform X1 [Cucurbita maxima] >XP_022979213.1 uncharacterized protein LOC111479016 isoform X1 [Cucurbita maxima])

HSP 1 Score: 188.3 bits (477), Expect = 3.4e-44
Identity = 91/106 (85.85%), Postives = 93/106 (87.74%), Query Frame = 0 

Query: 44  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVD 103
           GGILEVLLVNARDIKHTNLFGSRA+YVMVECGN EHRTKVSS          GLSLCSVD
Sbjct: 40  GGILEVLLVNARDIKHTNLFGSRAYYVMVECGNQEHRTKVSS----------GLSLCSVD 99

Query: 104 TGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSNESVGAI 150
           TGKHEKVCWNEKFSFE PSSDWKNITHIKFRIM+ KFLSNESVGAI
Sbjct: 100 TGKHEKVCWNEKFSFELPSSDWKNITHIKFRIMEIKFLSNESVGAI 135

[Close]
BLAST of Carg21003 vs. NCBI nr
Match: XP_023528829.1 (uncharacterized protein LOC111791648 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 170.6 bits (431), Expect = 7.3e-39
Identity = 83/106 (78.30%), Postives = 85/106 (80.19%), Query Frame = 0 

Query: 44  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVD 103
           GGILEV LVNARDIKHTNLFGSRA+YVMVECGNHEHRT+VSS                  
Sbjct: 40  GGILEVFLVNARDIKHTNLFGSRAYYVMVECGNHEHRTRVSS------------------ 99

Query: 104 TGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSNESVGAI 150
            GKHEKVCWNEKFSFE PSSDWKNITHIKFRIMQTKFLSNESVGAI
Sbjct: 100 -GKHEKVCWNEKFSFELPSSDWKNITHIKFRIMQTKFLSNESVGAI 126

[Close]
BLAST of Carg21003 vs. NCBI nr
Match: XP_022979215.1 (uncharacterized protein LOC111479016 isoform X2 [Cucurbita maxima])

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37
Identity = 82/106 (77.36%), Postives = 84/106 (79.25%), Query Frame = 0 

Query: 44  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVD 103
           GGILEVLLVNARDIKHTNLFGSRA+YVMVECGN EHRTKVSS                  
Sbjct: 40  GGILEVLLVNARDIKHTNLFGSRAYYVMVECGNQEHRTKVSS------------------ 99

Query: 104 TGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSNESVGAI 150
            GKHEKVCWNEKFSFE PSSDWKNITHIKFRIM+ KFLSNESVGAI
Sbjct: 100 -GKHEKVCWNEKFSFELPSSDWKNITHIKFRIMEIKFLSNESVGAI 126

[Close]
BLAST of Carg21003 vs. NCBI nr
Match: XP_023528831.1 (uncharacterized protein LOC111791648 isoform X4 [Cucurbita pepo subsp. pepo] >XP_023528832.1 uncharacterized protein LOC111791648 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 157.1 bits (396), Expect = 8.4e-35
Identity = 75/89 (84.27%), Postives = 77/89 (86.52%), Query Frame = 0 

Query: 61  NLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDTGKHEKVCWNEKFSFEF 120
           NL GSRA+YVMVECGNHEHRT+VSS          GLSLCSVDTGKHEKVCWNEKFSFE 
Sbjct: 4   NLSGSRAYYVMVECGNHEHRTRVSS----------GLSLCSVDTGKHEKVCWNEKFSFEL 63

Query: 121 PSSDWKNITHIKFRIMQTKFLSNESVGAI 150
           PSSDWKNITHIKFRIMQTKFLSNESVGAI
Sbjct: 64  PSSDWKNITHIKFRIMQTKFLSNESVGAI 82

[Close]
BLAST of Carg21003 vs. TAIR10
Match: AT4G00467.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 82.0 bits (201), Expect = 6.2e-16
Identity = 36/99 (36.36%), Postives = 56/99 (56.57%), Query Frame = 0 

Query: 45  GILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDT 104
           GILEV L++A  I HTN  G+  +YV+++CG  E+R+K+S                    
Sbjct: 4   GILEVFLIDAHGITHTNFIGTPVYYVLLQCGTKEYRSKMSK------------------- 63

Query: 105 GKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN 144
           G ++   WN+KF F+FP S WK +T+IK RI+  +  ++
Sbjct: 64  GDNDNALWNQKFVFDFPMSQWKKLTYIKLRILDKELFND 83

[Close]
BLAST of Carg21003 vs. TrEMBL
Match: tr|A0A1S4DSI8|A0A1S4DSI8_CUCME (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucumis melo OX=3656 GN=LOC103484166 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 72/105 (68.57%), Postives = 78/105 (74.29%), Query Frame = 0 

Query: 44  GGILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVD 103
           GGILEVLLVNA+DI+HTN  GS A+YV VECGNHEHRTKVSS                  
Sbjct: 638 GGILEVLLVNAKDIRHTNRLGSPAYYVTVECGNHEHRTKVSS------------------ 697

Query: 104 TGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSNESVGA 149
            GKHE  CWNEKFSFE P+SDWKNITHIKFRIM+TK L+NESVGA
Sbjct: 698 -GKHELACWNEKFSFELPTSDWKNITHIKFRIMETKLLNNESVGA 723


HSP 2 Score: 54.7 bits (130), Expect = 3.9e-04
Identity = 26/31 (83.87%), Postives = 28/31 (90.32%), Query Frame = 0 

Query: 1   MMLANGLRPNHVMMLSVIRAIDALSWDSMIE 32
           MM +NG RPN+V MLSVIRAIDALSWDSMIE
Sbjct: 76  MMFSNGHRPNYVTMLSVIRAIDALSWDSMIE 106

[Close]
BLAST of Carg21003 vs. TrEMBL
Match: tr|A0A2P5QB28|A0A2P5QB28_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD31388 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 6.4e-23
Identity = 57/112 (50.89%), Postives = 70/112 (62.50%), Query Frame = 0 

Query: 36  RSYPNGFYG----GILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSA 95
           RSY N        GILEVL+VNA DI+HTNL G  A+YV+++CG  E+RTK+S       
Sbjct: 3   RSYSNCLISLMKEGILEVLIVNAEDIRHTNLIGRPAYYVILQCGTKEYRTKIS------- 62

Query: 96  LFSYGLSLCSVDTGKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN 144
                        GKH+KV WNEKF F+FP S+WKN+THIKFRIM  +F  N
Sbjct: 63  ------------PGKHKKVLWNEKFKFDFPLSEWKNLTHIKFRIMDKEFFKN 95

[Close]
BLAST of Carg21003 vs. TrEMBL
Match: tr|A0A0D2PTG2|A0A0D2PTG2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_008G121500 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.9e-22
Identity = 53/99 (53.54%), Postives = 66/99 (66.67%), Query Frame = 0 

Query: 45  GILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDT 104
           GILEVL+VNA DI+HTNL G  A+YV+++CG  E+RTK+S                    
Sbjct: 4   GILEVLIVNAEDIRHTNLIGRPAYYVILQCGTKEYRTKIS-------------------P 63

Query: 105 GKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN 144
           GKH+KV WNEKF F+FP S+WKN+THIKFRIM  +F  N
Sbjct: 64  GKHKKVLWNEKFKFDFPLSEWKNLTHIKFRIMDKEFFKN 83

[Close]
BLAST of Carg21003 vs. TrEMBL
Match: tr|A0A061DT98|A0A061DT98_THECC (Calcium-dependent lipid-binding (CaLB domain) family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_005332 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.1e-22
Identity = 53/99 (53.54%), Postives = 67/99 (67.68%), Query Frame = 0 

Query: 45  GILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDT 104
           GILEVLLVNA DI+HTNL G+ A+YV+++CG  E+R+KVS                    
Sbjct: 4   GILEVLLVNAEDIRHTNLIGTPAYYVILQCGTQEYRSKVS-------------------P 63

Query: 105 GKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN 144
           GKHEKV WNEKF FEFP S+W+N+THI FRIM  +F ++
Sbjct: 64  GKHEKVLWNEKFKFEFPQSEWENLTHITFRIMDKEFFTD 83

[Close]
BLAST of Carg21003 vs. TrEMBL
Match: tr|A0A0B0PGG9|A0A0B0PGG9_GOSAR (Elicitor-responsive 3 OS=Gossypium arboreum OX=29729 GN=F383_06671 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 7.0e-22
Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 0 

Query: 45  GILEVLLVNARDIKHTNLFGSRAFYVMVECGNHEHRTKVSSGWLPSALFSYGLSLCSVDT 104
           GILEVL+VNA DI+HTNL G  A+YV+++CG  E+RTK S                    
Sbjct: 67  GILEVLIVNAEDIRHTNLIGRPAYYVILQCGTKEYRTKTS-------------------P 126

Query: 105 GKHEKVCWNEKFSFEFPSSDWKNITHIKFRIMQTKFLSN 144
           GKH+KV WNEKF F FP S+WKN+THIKFRIM  +F  N
Sbjct: 127 GKHKKVLWNEKFKFNFPLSEWKNLTHIKFRIMDKEFFKN 146

The following BLAST results are available for this feature:
BLAST of Carg21003 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023528824.12.4e-4586.79uncharacterized protein LOC111791648 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022979209.13.4e-4485.85uncharacterized protein LOC111479016 isoform X1 [Cucurbita maxima] >XP_022979210... [more]
XP_023528829.17.3e-3978.30uncharacterized protein LOC111791648 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022979215.11.1e-3777.36uncharacterized protein LOC111479016 isoform X2 [Cucurbita maxima][more]
XP_023528831.18.4e-3584.27uncharacterized protein LOC111791648 isoform X4 [Cucurbita pepo subsp. pepo] >XP... [more]
BLAST of Carg21003 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G00467.16.2e-1636.36Calcium-dependent lipid-binding (CaLB domain) family protein[more]
BLAST of Carg21003 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg21003 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DSI8|A0A1S4DSI8_CUCME1.2e-3268.57LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56... [more]
tr|A0A2P5QB28|A0A2P5QB28_GOSBA6.4e-2350.89Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD31388 PE=4 SV... [more]
tr|A0A0D2PTG2|A0A0D2PTG2_GOSRA1.9e-2253.54Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_008G121500 PE=4 ... [more]
tr|A0A061DT98|A0A061DT98_THECC4.1e-2253.54Calcium-dependent lipid-binding (CaLB domain) family protein, putative OS=Theobr... [more]
tr|A0A0B0PGG9|A0A0B0PGG9_GOSAR7.0e-2253.54Elicitor-responsive 3 OS=Gossypium arboreum OX=29729 GN=F383_06671 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg21003-RACarg21003-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3DG3DSA:2.60.40.150coord: 44..177
e-value: 1.2E-8
score: 37.2
IPR000008C2 domainPFAMPF00168C2coord: 45..150
e-value: 3.9E-5
score: 23.8
NoneNo IPR availableSUPERFAMILYSSF49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 38..155