BLAST of Carg24643 vs. NCBI nr
Match:
XP_023538701.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023538702.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023538703.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023538704.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1190.6 bits (3079), Expect = 0.0e+00
Identity = 588/604 (97.35%), Postives = 596/604 (98.68%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN 60
MLCFSRCAR LFVKSPQRKNYTIG VID TSAKKQAYYEDPVGFFA+QEDVISWTSKITN
Sbjct: 1 MLCFSRCARYLFVKSPQRKNYTIGLVIDATSAKKQAYYEDPVGFFAQQEDVISWTSKITN 60
Query: 61 LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
LVRTGQPDSAFGFFKMMFANGHRPN+VTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE
Sbjct: 61 LVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
Query: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQ 180
VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQF EAFHLFREMQYQ
Sbjct: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFIEAFHLFREMQYQ 180
Query: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS
Sbjct: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
Query: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV
Sbjct: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
Query: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
DEL+LGLAVHC+ALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI
Sbjct: 301 DELLLGLAVHCHALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
Query: 361 SAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
SAYSHGEEPLSAIQ+FK+MQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS
Sbjct: 361 SAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
Query: 421 SNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480
SNT LMSAL+DFYCILRRVKLGEHVF EIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM
Sbjct: 421 SNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480
Query: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQGK 540
LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWF +MIDEYNITPTVAHYACMVELLARQGK
Sbjct: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAMIDEYNITPTVAHYACMVELLARQGK 540
Query: 541 IREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHN 600
IREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHN
Sbjct: 541 IREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHN 600
Query: 601 FCAE 605
FC E
Sbjct: 601 FCIE 604
BLAST of Carg24643 vs. NCBI nr
Match:
XP_022974593.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita maxima] >XP_022974594.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 1179.9 bits (3051), Expect = 0.0e+00
Identity = 585/604 (96.85%), Postives = 592/604 (98.01%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN 60
MLCFSRCARNLFVK+PQRKNYTIG VID TSAKKQAYYEDPVGFFA+QEDVISWTSKITN
Sbjct: 1 MLCFSRCARNLFVKNPQRKNYTIGPVIDATSAKKQAYYEDPVGFFAQQEDVISWTSKITN 60
Query: 61 LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE
Sbjct: 61 LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
Query: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQ 180
VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVK+GQF EAFHLFREMQYQ
Sbjct: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKNGQFIEAFHLFREMQYQ 180
Query: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS
Sbjct: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
Query: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV
Sbjct: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
Query: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI
Sbjct: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
Query: 361 SAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
SAYSHGEEPLS IQ+FK+MQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS
Sbjct: 361 SAYSHGEEPLSVIQTFKMMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
Query: 421 SNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480
SNTRLMSAL+DFYCILRRVKLGEHVF EI+TKDLVCWSTMIKGYG NG GNEALNTFSDM
Sbjct: 421 SNTRLMSALVDFYCILRRVKLGEHVFDEILTKDLVCWSTMIKGYGMNGYGNEALNTFSDM 480
Query: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQGK 540
LSYGLK NGTLFVSLLSACAQCGLEKEGWMWF SMIDEYNITPTVAHYACMVELLARQGK
Sbjct: 481 LSYGLKLNGTLFVSLLSACAQCGLEKEGWMWFNSMIDEYNITPTVAHYACMVELLARQGK 540
Query: 541 IREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHN 600
IREAVEFV KMAVEPDTRI GALFAGCKL HGFSDIADSIVQQLNALEPNNSDFHAMLHN
Sbjct: 541 IREAVEFVNKMAVEPDTRICGALFAGCKLNHGFSDIADSIVQQLNALEPNNSDFHAMLHN 600
Query: 601 FCAE 605
FCAE
Sbjct: 601 FCAE 604
BLAST of Carg24643 vs. NCBI nr
Match:
XP_022934182.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 1144.4 bits (2959), Expect = 0.0e+00
Identity = 570/586 (97.27%), Postives = 575/586 (98.12%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN 60
MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN
Sbjct: 1 MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN 60
Query: 61 LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
LVRTGQPDSAFGFFKMMFANGHRPN+VTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE
Sbjct: 61 LVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
Query: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQ 180
VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQ SEAFHLFREMQYQ
Sbjct: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQCSEAFHLFREMQYQ 180
Query: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
GV PNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS
Sbjct: 181 GVRPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
Query: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV
Sbjct: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
Query: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI
Sbjct: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
Query: 361 SAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
SAYSHGEEPLSAIQ+FK+MQSTNERPNAITF SLVNACSSLDAQELGESIHAHITKSGYS
Sbjct: 361 SAYSHGEEPLSAIQTFKMMQSTNERPNAITFGSLVNACSSLDAQELGESIHAHITKSGYS 420
Query: 421 SNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480
SNTRLMSAL+DFYCILRRVKLGEHVFYEI+TKDLVCWSTMIKGYG NG G EALNTFSDM
Sbjct: 421 SNTRLMSALVDFYCILRRVKLGEHVFYEILTKDLVCWSTMIKGYGMNGYGKEALNTFSDM 480
Query: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQGK 540
LSYGLKPNGTLFVSLLSACAQCGLEK GWMWF SMIDEYNITPTVAHYACMVELLARQGK
Sbjct: 481 LSYGLKPNGTLFVSLLSACAQCGLEKAGWMWFNSMIDEYNITPTVAHYACMVELLARQGK 540
Query: 541 IREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNA 587
I VEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNA
Sbjct: 541 I---VEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNA 583
BLAST of Carg24643 vs. NCBI nr
Match:
XP_022147491.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X1 [Momordica charantia] >XP_022147492.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X1 [Momordica charantia])
HSP 1 Score: 1056.6 bits (2731), Expect = 3.2e-305
Identity = 516/605 (85.29%), Postives = 559/605 (92.40%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSA-KKQAYYEDPVGFFAKQEDVISWTSKIT 60
MLCFSRCARNLFVKSPQRKNY I +++ TS+ KKQAYYEDPVGF+A++EDVISWTSKIT
Sbjct: 1 MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKIT 60
Query: 61 NLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFES 120
NLVRTGQ ++AFGFFK MFANGHRPNHVTMLSV+RAIDALSWES EV+HGGVIKMGFES
Sbjct: 61 NLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFES 120
Query: 121 EVAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQY 180
EVAVSTALLGFYS RDIG VWKLFYQIPYKD+VLWSA+ISACVK+GQF EA LFREMQY
Sbjct: 121 EVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQY 180
Query: 181 QGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEA 240
QGV PNHVSIVS+LPACAD G +SLGKEIH FSMRRDFYS+VNIQNSLMDMYSKCRNLEA
Sbjct: 181 QGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEA 240
Query: 241 SIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLL 300
SIRVLK MRKKDMVSWRTVT+ACIQNNCPSKAFKIF+RMRSFGFELG+TMML IAAVLL
Sbjct: 241 SIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAAVLL 300
Query: 301 VDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAM 360
V+EL+LGLAVHCYALKGGFLCFI+VGTE+LQMYAKFG LGLAKL FDELVDKDIIAWSAM
Sbjct: 301 VEELLLGLAVHCYALKGGFLCFIAVGTEILQMYAKFGHLGLAKLIFDELVDKDIIAWSAM 360
Query: 361 ISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGY 420
ISAYSHGE+PL+AIQ+FK+MQSTNE+PN ITFVSLVNACSSL AQELGESIHAHI KSG
Sbjct: 361 ISAYSHGEDPLNAIQTFKMMQSTNEKPNEITFVSLVNACSSLGAQELGESIHAHIMKSGC 420
Query: 421 SSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSD 480
SSNT LMSA +D YC L R+K G+HVF EI TKDL+CWSTMIKGYG NGCGNEAL+TFSD
Sbjct: 421 SSNTHLMSAFVDLYCTLGRIKQGKHVFDEISTKDLICWSTMIKGYGMNGCGNEALDTFSD 480
Query: 481 MLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQG 540
MLS GLKPNG LFVSLLSACAQCG+EKEGW+WF SMID+YNITPTVAHYACMV+LL RQG
Sbjct: 481 MLSCGLKPNGVLFVSLLSACAQCGIEKEGWVWFRSMIDKYNITPTVAHYACMVDLLVRQG 540
Query: 541 KIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLH 600
KIREAVEFVKKM VEPDTRIWGALF GCKLTHGF DI DSIV+QL A+EPNNS+F+AML
Sbjct: 541 KIREAVEFVKKMPVEPDTRIWGALFTGCKLTHGFPDIVDSIVEQLTAMEPNNSNFYAMLL 600
Query: 601 NFCAE 605
+FCAE
Sbjct: 601 DFCAE 605
BLAST of Carg24643 vs. NCBI nr
Match:
XP_022147493.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X2 [Momordica charantia])
HSP 1 Score: 995.0 bits (2571), Expect = 1.1e-286
Identity = 493/605 (81.49%), Postives = 531/605 (87.77%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSA-KKQAYYEDPVGFFAKQEDVISWTSKIT 60
MLCFSRCARNLFVKSPQRKNY I +++ TS+ KKQAYYEDPVGF+A++EDVISWTSKIT
Sbjct: 1 MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKIT 60
Query: 61 NLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFES 120
NLVRTGQ ++AFGFFK MFANGHRPNHVTMLSV+RAIDALSWES EV+HGGVIKMGFES
Sbjct: 61 NLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFES 120
Query: 121 EVAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQY 180
EVAVSTALLGFYS RDIG VWKLFYQIPYKD+VLWSA+ISACVK+GQF EA LFREMQY
Sbjct: 121 EVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQY 180
Query: 181 QGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEA 240
QGV PNHVSIVS+LPACAD G +SLGKEIH FSMRRDFYS+VNIQNSLMDMYSKCRNLEA
Sbjct: 181 QGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEA 240
Query: 241 SIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLL 300
SIRVLK MRKKDMVSWRTVT+ACIQNNCPSKAFKIF+RMRSFGFELG+TMML IAAVLL
Sbjct: 241 SIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAAVLL 300
Query: 301 VDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAM 360
V+EL+LGLAVHCYALKGGFLCFI+VGTE+LQMYAKFG LGLAKL FDELVDKDIIAWSAM
Sbjct: 301 VEELLLGLAVHCYALKGGFLCFIAVGTEILQMYAKFGHLGLAKLIFDELVDKDIIAWSAM 360
Query: 361 ISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGY 420
ISAYSH VNACSSL AQELGESIHAHI KSG
Sbjct: 361 ISAYSH-----------------------------VNACSSLGAQELGESIHAHIMKSGC 420
Query: 421 SSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSD 480
SSNT LMSA +D YC L R+K G+HVF EI TKDL+CWSTMIKGYG NGCGNEAL+TFSD
Sbjct: 421 SSNTHLMSAFVDLYCTLGRIKQGKHVFDEISTKDLICWSTMIKGYGMNGCGNEALDTFSD 480
Query: 481 MLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQG 540
MLS GLKPNG LFVSLLSACAQCG+EKEGW+WF SMID+YNITPTVAHYACMV+LL RQG
Sbjct: 481 MLSCGLKPNGVLFVSLLSACAQCGIEKEGWVWFRSMIDKYNITPTVAHYACMVDLLVRQG 540
Query: 541 KIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLH 600
KIREAVEFVKKM VEPDTRIWGALF GCKLTHGF DI DSIV+QL A+EPNNS+F+AML
Sbjct: 541 KIREAVEFVKKMPVEPDTRIWGALFTGCKLTHGFPDIVDSIVEQLTAMEPNNSNFYAMLL 576
Query: 601 NFCAE 605
+FCAE
Sbjct: 601 DFCAE 576
BLAST of Carg24643 vs. TAIR10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 298.9 bits (764), Expect = 7.1e-81
Identity = 160/550 (29.09%), Postives = 294/550 (53.45%), Query Frame = 0
Query: 52 ISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGG 111
+ + + + + D A FF M + P +L+ + + +HG
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 112 VIKMGFESEVAVSTALLGFYS-MRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEA 171
++K GF ++ T L Y+ R + K+F ++P +D+V W+ +++ ++G A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 172 FHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDM 231
+ + M + + P+ ++IVS+LPA + +S+GKEIH ++MR F S+VNI +L+DM
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 232 YSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMM 291
Y+KC +LE + ++ M ++++VSW ++ A +QN P +A IF +M G + + +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 292 LDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVD 351
+ + A + +L G +H +++ G +SV L+ MY K E+ A F +L
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 352 KDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESI 411
+ +++W+AMI ++ P+ A+ F M+S +P+ T+VS++ A + L + I
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 412 HAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCG 471
H + +S N + +AL+D Y + + +F + + + W+ MI GYGT+G G
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 472 NEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYAC 531
AL F +M +KPNG F+S++SAC+ GL + G FY M + Y+I ++ HY
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 532 MVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPN 591
MV+LL R G++ EA +F+ +M V+P ++GA+ C++ H + A+ ++L L P+
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI-HKNVNFAEKAAERLFELNPD 640
Query: 592 NSDFHAMLHN 601
+ +H +L N
Sbjct: 641 DGGYHVLLAN 649
BLAST of Carg24643 vs. TAIR10
Match:
AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 293.5 bits (750), Expect = 3.0e-79
Identity = 166/567 (29.28%), Postives = 292/567 (51.50%), Query Frame = 0
Query: 37 YYEDPVGFFAKQEDVISWTSKITNLVRTGQPDSAFGFF-KMMFANGHRPNHVTMLSVLRA 96
YY + ++ DV + + P S+ F + + +PN T + A
Sbjct: 69 YYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISA 128
Query: 97 IDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFY-SMRDIGIVWKLFYQIPYKDVVLW 156
+ V+HG + G +SE+ + + ++ Y + K+F ++P KD +LW
Sbjct: 129 ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188
Query: 157 SAVISACVKHGQFSEAFHLFREMQYQG-VHPNHVSIVSILPACADFGALSLGKEIHAFSM 216
+ +IS K+ + E+ +FR++ + + +++ ILPA A+ L LG +IH+ +
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLAT 248
Query: 217 RRDFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFK 276
+ YS + + +YSKC ++ + + RK D+V++ + H N +
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLS 308
Query: 277 IFTRMRSFGFELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYA 336
+F + G L + + ++ V + L+L A+H Y LK FL SV T L +Y+
Sbjct: 309 LFKELMLSGARLRSSTL---VSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYS 368
Query: 337 KFGELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVS 396
K E+ A+ FDE +K + +W+AMIS Y+ AI F+ MQ + PN +T
Sbjct: 369 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITC 428
Query: 397 LVNACSSLDAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKD 456
+++AC+ L A LG+ +H + + + S+ + +AL+ Y + +F + K+
Sbjct: 429 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 488
Query: 457 LVCWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFY 516
V W+TMI GYG +G G EALN F +ML+ G+ P F+ +L AC+ GL KEG F
Sbjct: 489 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 548
Query: 517 SMIDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGF 576
SMI Y P+V HYACMV++L R G ++ A++F++ M++EP + +W L C++ H
Sbjct: 549 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI-HKD 608
Query: 577 SDIADSIVQQLNALEPNNSDFHAMLHN 601
+++A ++ ++L L+P+N +H +L N
Sbjct: 609 TNLARTVSEKLFELDPDNVGYHVLLSN 631
BLAST of Carg24643 vs. TAIR10
Match:
AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 290.4 bits (742), Expect = 2.5e-78
Identity = 170/557 (30.52%), Postives = 278/557 (49.91%), Query Frame = 0
Query: 48 QEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEV 107
Q D +++ + I L + G + A FK M +G P+ T+ S++ A A +
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 108 MHGGVIKMGFESEVAVSTALLGFYS-MRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQ 167
+H K+GF S + ALL Y+ DI F + ++VVLW+ ++ A
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 168 FSEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNS 227
+F +FR+MQ + + PN + SIL C G L LG++IH+ ++ +F + +
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 228 LMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELG 287
L+DMY+K L+ + +L KD+VSW T+ Q N KA F +M G
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 288 ETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFD 347
E + + ++A + L G +H A GF + L+ +Y++ G++ + L F+
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE 650
Query: 348 ELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQEL 407
+ D IAW+A++S + A++ F M N TF S V A S +
Sbjct: 651 QTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQ 710
Query: 408 GESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGT 467
G+ +HA ITK+GY S T + +AL+ Y + E F E+ TK+ V W+ +I Y
Sbjct: 711 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770
Query: 468 NGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVA 527
+G G+EAL++F M+ ++PN V +LSAC+ GL +G +F SM EY ++P
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 830
Query: 528 HYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNA 587
HY C+V++L R G + A EF+++M ++PD +W L + C + H +I + L
Sbjct: 831 HYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSAC-VVHKNMEIGEFAAHHLLE 890
Query: 588 LEPNNSDFHAMLHNFCA 604
LEP +S + +L N A
Sbjct: 891 LEPEDSATYVLLSNLYA 906
BLAST of Carg24643 vs. TAIR10
Match:
AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 287.0 bits (733), Expect = 2.8e-77
Identity = 169/579 (29.19%), Postives = 292/579 (50.43%), Query Frame = 0
Query: 28 DDTSAKKQAYYEDPVGFFAKQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHV 87
DD SA ++ + F ++ D + W S +++ +G+ F+ M G PN
Sbjct: 231 DDLSAARRLF-----DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 290
Query: 88 TMLSVLRAIDALSWESTIEVMHGGVIKMG-FESEVAVSTALLGFYS-MRDIGIVWKLFYQ 147
T++S L A D S+ + +H V+K SE+ V AL+ Y+ + ++ Q
Sbjct: 291 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 350
Query: 148 IPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLG 207
+ DVV W+++I V++ + EA F +M G + VS+ SI+ A L G
Sbjct: 351 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 410
Query: 208 KEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQN 267
E+HA+ ++ + S + + N+L+DMYSKC R M KD++SW TV QN
Sbjct: 411 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 470
Query: 268 NCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVG 327
+C +A ++F + E+ E ++ + A ++ +++ +HC+ L+ G L + +
Sbjct: 471 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQ 530
Query: 328 TELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNER 387
EL+ +Y K +G A F+ + KD+++W++MIS+ + A++ F+ M T
Sbjct: 531 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 590
Query: 388 PNAITFVSLVNACSSLDAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHV 447
+++ + +++A +SL A G IH ++ + G+ + A++D Y ++ + V
Sbjct: 591 ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAV 650
Query: 448 FYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLE 507
F I K L+ +++MI YG +GCG A+ F M + P+ F++LL AC+ GL
Sbjct: 651 FDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLL 710
Query: 508 KEGWMWFYSMIDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFA 567
EG + M EY + P HY C+V++L R + EA EFVK M EP +W AL A
Sbjct: 711 DEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLA 770
Query: 568 GCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHNFCAE 605
C+ +H +I + Q+L LEP N ++ N AE
Sbjct: 771 ACR-SHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAE 802
BLAST of Carg24643 vs. TAIR10
Match:
AT3G53360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 285.8 bits (730), Expect = 6.2e-77
Identity = 166/557 (29.80%), Postives = 279/557 (50.09%), Query Frame = 0
Query: 45 FAKQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWEST 104
F + +++S+TS IT + GQ A + M P+ S+++A + S
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 105 IEVMHGGVIKMGFESEVAVSTALLGFY-SMRDIGIVWKLFYQIPYKDVVLWSAVISACVK 164
+ +H VIK+ S + AL+ Y + ++FY IP KD++ WS++I+ +
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 165 HGQFSEAFHLFREMQYQGV-HPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVN 224
G EA +EM GV HPN S L AC+ G +IH ++ +
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306
Query: 225 IQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFG 284
SL DMY++C L ++ RV + + D SW + N +A +F++MRS G
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 285 FELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAK 344
F + + A L G+ +H Y +K GFL ++V LL MY +L
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426
Query: 345 LTFDELVDK-DIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSL 404
F++ + D ++W+ +++A E+P+ ++ FK+M + P+ IT +L+ C +
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 486
Query: 405 DAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMI 464
+ +LG +H + K+G + + + L+D Y + +F + +D+V WST+I
Sbjct: 487 SSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLI 546
Query: 465 KGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNI 524
GY +G G EAL F +M S G++PN FV +L+AC+ GL +EG + +M E+ I
Sbjct: 547 VGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGI 606
Query: 525 TPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIV 584
+PT H +C+V+LLAR G++ EA F+ +M +EPD +W L + CK T G +A
Sbjct: 607 SPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACK-TQGNVHLAQKAA 666
Query: 585 QQLNALEPNNSDFHAML 599
+ + ++P NS H +L
Sbjct: 667 ENILKIDPFNSTAHVLL 682
BLAST of Carg24643 vs. Swiss-Prot
Match:
sp|Q3E6Q1|PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 298.9 bits (764), Expect = 1.3e-79
Identity = 160/550 (29.09%), Postives = 294/550 (53.45%), Query Frame = 0
Query: 52 ISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGG 111
+ + + + + D A FF M + P +L+ + + +HG
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 112 VIKMGFESEVAVSTALLGFYS-MRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEA 171
++K GF ++ T L Y+ R + K+F ++P +D+V W+ +++ ++G A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 172 FHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDM 231
+ + M + + P+ ++IVS+LPA + +S+GKEIH ++MR F S+VNI +L+DM
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 232 YSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMM 291
Y+KC +LE + ++ M ++++VSW ++ A +QN P +A IF +M G + + +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 292 LDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVD 351
+ + A + +L G +H +++ G +SV L+ MY K E+ A F +L
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 352 KDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESI 411
+ +++W+AMI ++ P+ A+ F M+S +P+ T+VS++ A + L + I
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 412 HAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCG 471
H + +S N + +AL+D Y + + +F + + + W+ MI GYGT+G G
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 472 NEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYAC 531
AL F +M +KPNG F+S++SAC+ GL + G FY M + Y+I ++ HY
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 532 MVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPN 591
MV+LL R G++ EA +F+ +M V+P ++GA+ C++ H + A+ ++L L P+
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI-HKNVNFAEKAAERLFELNPD 640
Query: 592 NSDFHAMLHN 601
+ +H +L N
Sbjct: 641 DGGYHVLLAN 649
BLAST of Carg24643 vs. Swiss-Prot
Match:
sp|Q9SUH6|PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)
HSP 1 Score: 293.5 bits (750), Expect = 5.3e-78
Identity = 166/567 (29.28%), Postives = 292/567 (51.50%), Query Frame = 0
Query: 37 YYEDPVGFFAKQEDVISWTSKITNLVRTGQPDSAFGFF-KMMFANGHRPNHVTMLSVLRA 96
YY + ++ DV + + P S+ F + + +PN T + A
Sbjct: 69 YYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISA 128
Query: 97 IDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFY-SMRDIGIVWKLFYQIPYKDVVLW 156
+ V+HG + G +SE+ + + ++ Y + K+F ++P KD +LW
Sbjct: 129 ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188
Query: 157 SAVISACVKHGQFSEAFHLFREMQYQG-VHPNHVSIVSILPACADFGALSLGKEIHAFSM 216
+ +IS K+ + E+ +FR++ + + +++ ILPA A+ L LG +IH+ +
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLAT 248
Query: 217 RRDFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFK 276
+ YS + + +YSKC ++ + + RK D+V++ + H N +
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLS 308
Query: 277 IFTRMRSFGFELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYA 336
+F + G L + + ++ V + L+L A+H Y LK FL SV T L +Y+
Sbjct: 309 LFKELMLSGARLRSSTL---VSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYS 368
Query: 337 KFGELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVS 396
K E+ A+ FDE +K + +W+AMIS Y+ AI F+ MQ + PN +T
Sbjct: 369 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITC 428
Query: 397 LVNACSSLDAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKD 456
+++AC+ L A LG+ +H + + + S+ + +AL+ Y + +F + K+
Sbjct: 429 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 488
Query: 457 LVCWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFY 516
V W+TMI GYG +G G EALN F +ML+ G+ P F+ +L AC+ GL KEG F
Sbjct: 489 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 548
Query: 517 SMIDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGF 576
SMI Y P+V HYACMV++L R G ++ A++F++ M++EP + +W L C++ H
Sbjct: 549 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI-HKD 608
Query: 577 SDIADSIVQQLNALEPNNSDFHAMLHN 601
+++A ++ ++L L+P+N +H +L N
Sbjct: 609 TNLARTVSEKLFELDPDNVGYHVLLSN 631
BLAST of Carg24643 vs. Swiss-Prot
Match:
sp|Q9SVP7|PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 290.4 bits (742), Expect = 4.5e-77
Identity = 170/557 (30.52%), Postives = 278/557 (49.91%), Query Frame = 0
Query: 48 QEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEV 107
Q D +++ + I L + G + A FK M +G P+ T+ S++ A A +
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 108 MHGGVIKMGFESEVAVSTALLGFYS-MRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQ 167
+H K+GF S + ALL Y+ DI F + ++VVLW+ ++ A
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 168 FSEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNS 227
+F +FR+MQ + + PN + SIL C G L LG++IH+ ++ +F + +
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 228 LMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELG 287
L+DMY+K L+ + +L KD+VSW T+ Q N KA F +M G
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 288 ETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFD 347
E + + ++A + L G +H A GF + L+ +Y++ G++ + L F+
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE 650
Query: 348 ELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQEL 407
+ D IAW+A++S + A++ F M N TF S V A S +
Sbjct: 651 QTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQ 710
Query: 408 GESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGT 467
G+ +HA ITK+GY S T + +AL+ Y + E F E+ TK+ V W+ +I Y
Sbjct: 711 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770
Query: 468 NGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVA 527
+G G+EAL++F M+ ++PN V +LSAC+ GL +G +F SM EY ++P
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 830
Query: 528 HYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNA 587
HY C+V++L R G + A EF+++M ++PD +W L + C + H +I + L
Sbjct: 831 HYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSAC-VVHKNMEIGEFAAHHLLE 890
Query: 588 LEPNNSDFHAMLHNFCA 604
LEP +S + +L N A
Sbjct: 891 LEPEDSATYVLLSNLYA 906
BLAST of Carg24643 vs. Swiss-Prot
Match:
sp|Q9M1V3|PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)
HSP 1 Score: 287.0 bits (733), Expect = 5.0e-76
Identity = 169/579 (29.19%), Postives = 292/579 (50.43%), Query Frame = 0
Query: 28 DDTSAKKQAYYEDPVGFFAKQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHV 87
DD SA ++ + F ++ D + W S +++ +G+ F+ M G PN
Sbjct: 231 DDLSAARRLF-----DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 290
Query: 88 TMLSVLRAIDALSWESTIEVMHGGVIKMG-FESEVAVSTALLGFYS-MRDIGIVWKLFYQ 147
T++S L A D S+ + +H V+K SE+ V AL+ Y+ + ++ Q
Sbjct: 291 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 350
Query: 148 IPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLG 207
+ DVV W+++I V++ + EA F +M G + VS+ SI+ A L G
Sbjct: 351 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 410
Query: 208 KEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQN 267
E+HA+ ++ + S + + N+L+DMYSKC R M KD++SW TV QN
Sbjct: 411 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 470
Query: 268 NCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVG 327
+C +A ++F + E+ E ++ + A ++ +++ +HC+ L+ G L + +
Sbjct: 471 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQ 530
Query: 328 TELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNER 387
EL+ +Y K +G A F+ + KD+++W++MIS+ + A++ F+ M T
Sbjct: 531 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 590
Query: 388 PNAITFVSLVNACSSLDAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHV 447
+++ + +++A +SL A G IH ++ + G+ + A++D Y ++ + V
Sbjct: 591 ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAV 650
Query: 448 FYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLE 507
F I K L+ +++MI YG +GCG A+ F M + P+ F++LL AC+ GL
Sbjct: 651 FDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLL 710
Query: 508 KEGWMWFYSMIDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFA 567
EG + M EY + P HY C+V++L R + EA EFVK M EP +W AL A
Sbjct: 711 DEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLA 770
Query: 568 GCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHNFCAE 605
C+ +H +I + Q+L LEP N ++ N AE
Sbjct: 771 ACR-SHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAE 802
BLAST of Carg24643 vs. Swiss-Prot
Match:
sp|Q9LFI1|PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E86 PE=2 SV=1)
HSP 1 Score: 285.8 bits (730), Expect = 1.1e-75
Identity = 166/557 (29.80%), Postives = 279/557 (50.09%), Query Frame = 0
Query: 45 FAKQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWEST 104
F + +++S+TS IT + GQ A + M P+ S+++A + S
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 105 IEVMHGGVIKMGFESEVAVSTALLGFY-SMRDIGIVWKLFYQIPYKDVVLWSAVISACVK 164
+ +H VIK+ S + AL+ Y + ++FY IP KD++ WS++I+ +
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 165 HGQFSEAFHLFREMQYQGV-HPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVN 224
G EA +EM GV HPN S L AC+ G +IH ++ +
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306
Query: 225 IQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFG 284
SL DMY++C L ++ RV + + D SW + N +A +F++MRS G
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 285 FELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAK 344
F + + A L G+ +H Y +K GFL ++V LL MY +L
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426
Query: 345 LTFDELVDK-DIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSL 404
F++ + D ++W+ +++A E+P+ ++ FK+M + P+ IT +L+ C +
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 486
Query: 405 DAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMI 464
+ +LG +H + K+G + + + L+D Y + +F + +D+V WST+I
Sbjct: 487 SSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLI 546
Query: 465 KGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNI 524
GY +G G EAL F +M S G++PN FV +L+AC+ GL +EG + +M E+ I
Sbjct: 547 VGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGI 606
Query: 525 TPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIV 584
+PT H +C+V+LLAR G++ EA F+ +M +EPD +W L + CK T G +A
Sbjct: 607 SPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACK-TQGNVHLAQKAA 666
Query: 585 QQLNALEPNNSDFHAML 599
+ + ++P NS H +L
Sbjct: 667 ENILKIDPFNSTAHVLL 682
BLAST of Carg24643 vs. TrEMBL
Match:
tr|A0A1S4DSI8|A0A1S4DSI8_CUCME (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucumis melo OX=3656 GN=LOC103484166 PE=4 SV=1)
HSP 1 Score: 936.0 bits (2418), Expect = 4.2e-269
Identity = 459/571 (80.39%), Postives = 507/571 (88.79%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN 60
MLCFSRCARNLFV SP RKNYTI S++D TS KK+ Y+EDPV F+A++EDVISWTSKITN
Sbjct: 1 MLCFSRCARNLFVISPNRKNYTIRSMMDATSTKKRGYFEDPVEFYAQREDVISWTSKITN 60
Query: 61 LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
LVR GQP+SAFGFFKMMF+NGHRPN+VTMLSV+RAIDALSW+S IEVMHG IKMGFESE
Sbjct: 61 LVRAGQPESAFGFFKMMFSNGHRPNYVTMLSVIRAIDALSWDSMIEVMHGVTIKMGFESE 120
Query: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQ 180
VAVSTALLGFYS+RDI VWKLF QIP KDVV WSA+ISACVK+GQ+SEAF L REMQ Q
Sbjct: 121 VAVSTALLGFYSIRDIETVWKLFNQIPCKDVVFWSAIISACVKNGQYSEAFDLLREMQDQ 180
Query: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
GV PN VSIVSILPACADFG LSLGKE+HAFSMR+DFYS+V+IQNSLMDMYSKCR EAS
Sbjct: 181 GVQPNQVSIVSILPACADFGVLSLGKELHAFSMRKDFYSMVDIQNSLMDMYSKCRMFEAS 240
Query: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
I+VLK MRKKD VSW+ +THACIQNN PS+ FKIF+RMRS GFEL ETM+LD I+AVLLV
Sbjct: 241 IKVLKLMRKKDAVSWKIITHACIQNNYPSEVFKIFSRMRSLGFELSETMVLDMISAVLLV 300
Query: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
DEL+LGLAVHCYALKGGFLCFI VGTELLQMYAKFG+L LAKL FDELVDKDIIAWSAMI
Sbjct: 301 DELLLGLAVHCYALKGGFLCFILVGTELLQMYAKFGDLRLAKLVFDELVDKDIIAWSAMI 360
Query: 361 SAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
S YSHGE+PL+AIQ+FK+MQSTNE+PN TFVSL++ACSSL A+ELGESI AH K GY+
Sbjct: 361 SVYSHGEDPLNAIQTFKMMQSTNEKPNERTFVSLMDACSSLGAKELGESIQAHTIKCGYT 420
Query: 421 SNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480
SNT LMSAL+ FYC L R+KLGEHVF EI TKDL+CW+ MIKGYG NGCGN+ALNTFSDM
Sbjct: 421 SNTHLMSALVGFYCTLGRIKLGEHVFDEISTKDLICWNAMIKGYGLNGCGNKALNTFSDM 480
Query: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQGK 540
LSYGLKPNG +F SLLSACAQCGLEKE MWF SMID+Y ITPT AHYAC+V+LL R+GK
Sbjct: 481 LSYGLKPNGVVFASLLSACAQCGLEKEVRMWFRSMIDKYGITPTEAHYACIVDLLVRKGK 540
Query: 541 IREAVEFVKKMAVEPDTRIWGALFAGCKLTH 572
I EAVEFVK M VEPDTRIWGAL GCKLTH
Sbjct: 541 IGEAVEFVKXMPVEPDTRIWGALLLGCKLTH 571
BLAST of Carg24643 vs. TrEMBL
Match:
tr|A0A0A0L489|A0A0A0L489_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122420 PE=4 SV=1)
HSP 1 Score: 903.3 bits (2333), Expect = 3.0e-259
Identity = 442/550 (80.36%), Postives = 494/550 (89.82%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN 60
MLCFSRCARNLFV S +RK+YTI S++D TS KK+ Y+EDPV F+A++EDVISWTSKITN
Sbjct: 1 MLCFSRCARNLFVVSSKRKDYTIRSMVDATSTKKRVYFEDPVEFYAQREDVISWTSKITN 60
Query: 61 LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
LVRTGQP+SAFGFFKMMF+NGHRPN+VTMLSV+RAIDALSW+S IEVMHG VIKMGFESE
Sbjct: 61 LVRTGQPESAFGFFKMMFSNGHRPNYVTMLSVIRAIDALSWDSMIEVMHGVVIKMGFESE 120
Query: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQ 180
VAVSTALLGFYS+RDI VWKLF QIP KDVVLWSA+IS CVK+GQ++EAF L REMQ Q
Sbjct: 121 VAVSTALLGFYSIRDIETVWKLFNQIPSKDVVLWSAIISVCVKNGQYNEAFDLLREMQDQ 180
Query: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
GV PN V+IVSILPACADFG LSLGKE+HAFSMRRDFYS+V++QNSLMDMYSKCR EAS
Sbjct: 181 GVQPNQVTIVSILPACADFGVLSLGKELHAFSMRRDFYSMVDLQNSLMDMYSKCRKFEAS 240
Query: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
IRVLK MRKKD VSW+ +THACIQNNCPSK FKIF+RMRSFGFEL ETMMLD I+AVLL+
Sbjct: 241 IRVLKLMRKKDAVSWKIITHACIQNNCPSKVFKIFSRMRSFGFELSETMMLDMISAVLLL 300
Query: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
DEL+LGLAVHCYALKGGFLCFI VGTELLQMYAKFG+L LAKL FD LVDKDIIAWSAMI
Sbjct: 301 DELLLGLAVHCYALKGGFLCFILVGTELLQMYAKFGDLRLAKLVFDGLVDKDIIAWSAMI 360
Query: 361 SAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
SAYSHGE+PL+AIQ+FK+MQSTNE+PN TFVSL++ACSSL A+ELGE+I AH K GY+
Sbjct: 361 SAYSHGEDPLNAIQTFKMMQSTNEKPNERTFVSLMDACSSLGAKELGETIQAHTIKCGYT 420
Query: 421 SNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480
SNT LMSAL+ FYC L R+KLGEHVF EI KD++CW+ +IKGYG NGCGN+ALNTFSDM
Sbjct: 421 SNTHLMSALVGFYCKLGRIKLGEHVFDEISRKDVICWNALIKGYGLNGCGNKALNTFSDM 480
Query: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQGK 540
LSYGLKPNG +F SLLSACAQCGLEKE MWF SM DEY ITPT+AHYAC+V+LL RQGK
Sbjct: 481 LSYGLKPNGVVFASLLSACAQCGLEKEVRMWFRSMNDEYGITPTMAHYACIVDLLVRQGK 540
Query: 541 IREAVEFVKK 551
IREAVEFVKK
Sbjct: 541 IREAVEFVKK 550
BLAST of Carg24643 vs. TrEMBL
Match:
tr|A0A2N9F7C2|A0A2N9F7C2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14708 PE=4 SV=1)
HSP 1 Score: 711.8 bits (1836), Expect = 1.3e-201
Identity = 346/569 (60.81%), Postives = 427/569 (75.04%), Query Frame = 0
Query: 36 AYYEDPVGFFAKQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRA 95
AYYEDPV F+A++E+VISWTSKI+ LVR QP+ A G FK M N RPN VT+LSV+RA
Sbjct: 20 AYYEDPVDFYAQRENVISWTSKISGLVRKNQPNEAVGLFKKMLENEERPNFVTVLSVIRA 79
Query: 96 IDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWS 155
+ AL E+ I V+H VIK+GFESEV+V TALLG YSM D+GIVWKLFY+IP KDVVLWS
Sbjct: 80 VGALDCEAMIRVVHALVIKIGFESEVSVLTALLGCYSMYDMGIVWKLFYRIPSKDVVLWS 139
Query: 156 AVISACVKHGQFSEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRR 215
A++SACV++GQ+ EA FR+MQ GV PNHVSIVSILPACAD G LSLGKEIH FS++
Sbjct: 140 AMVSACVRNGQYFEALEFFRDMQCHGVQPNHVSIVSILPACADLGVLSLGKEIHGFSIKS 199
Query: 216 DFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIF 275
FY + N+QNSL+ MY+KCRNLEASIRV K + KKD +SWRT+ CI+N CP KA IF
Sbjct: 200 VFYCLRNVQNSLVVMYAKCRNLEASIRVFKVIWKKDTISWRTIIRGCIENECPKKALSIF 259
Query: 276 TRMRSFGFELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKF 335
+MR FE ET++ D + A +E GLA HCY LKGGFL F+SVGT L+QMY+KF
Sbjct: 260 LKMRLSCFEPNETIIRDIVVASSQAEEHKFGLAFHCYILKGGFLAFVSVGTVLMQMYSKF 319
Query: 336 GELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLV 395
GE A+ FD+L D+IAWS MIS Y+ G P +A + K MQS NE+PN ITFVSL+
Sbjct: 320 GEESSARTIFDQLNHIDLIAWSVMISVYAQGRNPHNAFDTLKQMQSMNEKPNEITFVSLL 379
Query: 396 NACSSLDAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLV 455
ACSS+ +QELGESIHAH+ K+GYS N L S L+D YC R+K G+ +F EI TKDL+
Sbjct: 380 QACSSIGSQELGESIHAHVIKAGYSMNAYLQSTLIDLYCKFGRIKQGKALFDEIPTKDLI 439
Query: 456 CWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSM 515
CWS+MIKGYG NGCG EAL T S+ML G+KPN +F+S+LSAC QCGLE EG WF+SM
Sbjct: 440 CWSSMIKGYGMNGCGTEALKTLSNMLDCGVKPNDIVFISVLSACGQCGLEYEGRSWFHSM 499
Query: 516 IDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSD 575
+Y ITP + HYACMV LL+R+GKI EA+EFV+KM V+PD RIWG L A C+ THG +
Sbjct: 500 AAKYGITPKLPHYACMVGLLSRRGKIEEALEFVRKMPVKPDKRIWGTLLACCRSTHGSIE 559
Query: 576 IADSIVQQLNALEPNNSDFHAMLHNFCAE 605
IA+ +++QL AL+P+N+ + L + AE
Sbjct: 560 IAEFVIEQLVALDPHNTSHYVFLSDLYAE 588
BLAST of Carg24643 vs. TrEMBL
Match:
tr|A5C4V9|A5C4V9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_040403 PE=4 SV=1)
HSP 1 Score: 684.5 bits (1765), Expect = 2.2e-193
Identity = 326/569 (57.29%), Postives = 424/569 (74.52%), Query Frame = 0
Query: 36 AYYEDPVGFFAKQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRA 95
AYYE+PV F ++++VISWTSKI++LV+ Q + A G FKMM RPNHVT+LSV+RA
Sbjct: 39 AYYEEPVEFHGEKDNVISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRA 98
Query: 96 IDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWS 155
I L E + V+ G VIK+GFESEV+V+TAL+GFYS D+GIVWK+F Q P KD+VLWS
Sbjct: 99 ISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDYDMGIVWKIFNQTPIKDLVLWS 158
Query: 156 AVISACVKHGQFSEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRR 215
A++SACVK GQ+ EAF +FR MQY GV PNHVSIVSILPACA+ GAL GKEIH FS+++
Sbjct: 159 AMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKK 218
Query: 216 DFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIF 275
F+ + N+ NSL+DMY+KCRN +AS+ V + +KD++SW T+ CI+N+CP +AFK F
Sbjct: 219 MFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAF 278
Query: 276 TRMRSFGFELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKF 335
+RM+ F ET++ D I A++ DE G+A H + LK G L F+S+GT LLQMYAKF
Sbjct: 279 SRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKF 338
Query: 336 GELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLV 395
GEL A + FD+L KD I+WSAMIS ++H P +A+++FK MQST+ERPN ITFVSL+
Sbjct: 339 GELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLL 398
Query: 396 NACSSLDAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLV 455
ACS + AQELGESI AH TK+GY SN L SAL+D YC R+ G +F EI TKDLV
Sbjct: 399 QACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLV 458
Query: 456 CWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSM 515
CWS+MI GYG NGCG+EAL TFS+ML+ G+KPN +F+S+LSAC+ CGLE EGW F SM
Sbjct: 459 CWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSM 518
Query: 516 IDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSD 575
+Y I P + HYACMV+L++R+G I A++FV KM +EPD RIWGAL AGC+ THG +
Sbjct: 519 EQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIE 578
Query: 576 IADSIVQQLNALEPNNSDFHAMLHNFCAE 605
IA+ + ++L L+P N+ ++ +L N AE
Sbjct: 579 IAELVAERLIGLDPQNTSYYVILSNLYAE 607
BLAST of Carg24643 vs. TrEMBL
Match:
tr|A0A2R6Q8X4|A0A2R6Q8X4_ACTCH (Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc20204 PE=4 SV=1)
HSP 1 Score: 653.7 bits (1685), Expect = 4.1e-184
Identity = 313/602 (51.99%), Postives = 431/602 (71.59%), Query Frame = 0
Query: 6 RCARNLFVKSPQRKNYTIGSV---IDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITNLV 65
R LF + QR + SV T K +Y+EDP+ FF + ++VISWTSKI++LV
Sbjct: 6 RNTHKLFEEITQRWAFMRNSVHYLSHSTLHKTHSYFEDPIEFFGENQNVISWTSKISSLV 65
Query: 66 RTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESEVA 125
R +P+ A G FK+M NG PN VT+LSV+RAI+ L +++ + +HG ++KMGFESEV+
Sbjct: 66 RRDKPEEAIGLFKIMLVNGQSPNFVTILSVIRAIENLGFDNLTQAIHGLLLKMGFESEVS 125
Query: 126 VSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQGV 185
V T LLG YS+ D + WKLF ++P +D+ LW+A++S CVK GQ+ +AF +FR M Y V
Sbjct: 126 VVTCLLGAYSVGDDEVAWKLFDEMPNRDLFLWNAILSVCVKSGQYFKAFEIFRGMHYNCV 185
Query: 186 HPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEASIR 245
PNHVSIVS+LPACA G + G++IH FS++ +++ N+QNSL+DMY+KC LE SIR
Sbjct: 186 QPNHVSIVSMLPACAALGNSAFGRQIHGFSIKLVCHALTNVQNSLVDMYAKCGYLETSIR 245
Query: 246 VLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLVDE 305
V T+ KKD++SWRT+ H C++N CP A +F+RM+S F E ++LD I A ++
Sbjct: 246 VFDTIEKKDLISWRTMIHGCVKNECPRTALHMFSRMKSCSFIPDEVIILDAIGASAEAEK 305
Query: 306 LVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMISA 365
+ GL H Y LK GF+ F+SV T LLQMY KFG A + F+++ KD+IAWSAMISA
Sbjct: 306 VSFGLGFHGYTLKSGFINFVSVMTALLQMYVKFGIFESATIIFNQIQWKDLIAWSAMISA 365
Query: 366 YSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYSSN 425
Y+ PL+A+ +FK MQSTNE PN +T VS++ ACSS+ Q+LGE+IHAH+TK GYSSN
Sbjct: 366 YAQSGHPLNALDTFKEMQSTNEEPNEVTLVSVLQACSSMGVQDLGENIHAHVTKVGYSSN 425
Query: 426 TRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDMLS 485
L+SAL+DFYC R++ G+ +F EI+ KDLVCWS+MI GYG NG G EAL TFS ML+
Sbjct: 426 AFLISALIDFYCKFGRIRQGKALFDEILVKDLVCWSSMINGYGINGRGVEALETFSKMLN 485
Query: 486 YGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQGKIR 545
G+ PN +F+SLLSAC+ CGLE EGW WFY+M + Y I+P +AHYACMV+LL+R+G +
Sbjct: 486 CGVMPNEVVFISLLSACSHCGLENEGWNWFYAMEEIYGISPKLAHYACMVDLLSRRGNVE 545
Query: 546 EAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHNFC 605
EA+EFV+ M ++PD RIWGAL AGC+ ++G ++A+ +V+QL L+P+N+ + +L N
Sbjct: 546 EALEFVRSMPIKPDKRIWGALLAGCRSSYGSIEMAEFVVEQLIGLDPDNTSCYVVLSNLY 605
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023538701.1 | 0.0e+00 | 97.35 | pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita ... | [more] |
XP_022974593.1 | 0.0e+00 | 96.85 | pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita ... | [more] |
XP_022934182.1 | 0.0e+00 | 97.27 | pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita ... | [more] |
XP_022147491.1 | 3.2e-305 | 85.29 | pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X1 [Momo... | [more] |
XP_022147493.1 | 1.1e-286 | 81.49 | pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X2 [Momo... | [more] |
Match Name | E-value | Identity | Description | |
AT1G11290.1 | 7.1e-81 | 29.09 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G30700.1 | 3.0e-79 | 29.28 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G13650.1 | 2.5e-78 | 30.52 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G63370.1 | 2.8e-77 | 29.19 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G53360.1 | 6.2e-77 | 29.80 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |