Carg24643 (gene) Silver-seed gourd

NameCarg24643
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat-containing protein
LocationCucurbita_argyrosperma_scaffold_269 : 47920 .. 49734 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGTGCTTTTCAAGATGTGCACGCAACCTGTTTGTCAAAAGTCCCCAAAGAAAAAATTACACGATAGGTTCTGTGATCGATGATACTTCAGCCAAAAAACAAGCATATTACGAAGACCCAGTTGGATTCTTCGCAAAACAAGAGGATGTAATATCTTGGACGTCTAAAATCACCAATTTGGTAAGAACAGGCCAGCCGGATTCGGCTTTTGGCTTCTTCAAGATGATGTTCGCAAATGGGCACAGGCCAAATCATGTGACAATGCTGAGCGTATTAAGAGCGATTGACGCATTAAGCTGGGAATCAACGATTGAGGTGATGCATGGAGGAGTGATCAAAATGGGGTTTGAATCAGAAGTGGCAGTTTCAACGGCTCTTCTTGGGTTTTACTCAATGCGTGATATTGGGATCGTTTGGAAGTTGTTTTATCAGATACCTTATAAGGATGTTGTTTTGTGGAGTGCTGTGATCTCGGCATGCGTGAAACATGGCCAGTTTAGTGAAGCATTTCATCTTTTCAGAGAGATGCAATATCAAGGTGTTCATCCAAACCATGTAAGCATTGTAAGCATTCTACCTGCTTGTGCTGATTTTGGTGCTCTATCTTTGGGTAAAGAGATTCATGCGTTTTCAATGAGAAGGGATTTTTATTCTATAGTTAACATTCAGAACTCACTCATGGATATGTATTCAAAATGTAGAAATCTTGAGGCATCAATTAGAGTTTTGAAAACGATGAGGAAAAAGGACATGGTGTCATGGAGAACTGTAACTCATGCGTGTATCCAGAACAATTGTCCTAGTAAAGCCTTTAAAATTTTCACAAGGATGCGGTCTTTTGGATTCGAATTGGGCGAAACGATGATGCTGGACTTTATAGCTGCTGTGTTATTAGTTGATGAACTTGTACTTGGCTTGGCTGTTCATTGTTATGCGCTGAAAGGTGGTTTTCTCTGTTTTATTTCAGTTGGAACTGAACTGCTCCAAATGTATGCTAAATTTGGTGAATTGGGGTTGGCCAAACTTACATTTGATGAGCTTGTTGACAAAGATATCATTGCATGGAGCGCAATGATCTCAGCATACTCTCATGGTGAAGAACCACTTAGTGCCATCCAGTCATTTAAAGTGATGCAATCAACTAATGAAAGGCCTAATGCCATAACTTTTGTAAGTCTAGTGAATGCCTGTTCTTCATTGGATGCTCAGGAACTGGGAGAAAGTATACACGCTCATATAACGAAATCTGGTTACTCGTCTAATACACGTTTGATGTCTGCTCTGCTTGATTTTTACTGCATACTTAGAAGGGTAAAGCTAGGAGAACATGTTTTTTATGAGATTGTGACAAAGGATTTAGTTTGTTGGAGTACGATGATTAAAGGGTATGGTACGAATGGCTGCGGGAATGAGGCACTCAATACATTCTCAGACATGTTAAGTTATGGTTTGAAGCCGAATGGGACGCTCTTCGTTTCTCTTTTATCTGCTTGTGCTCAATGTGGATTGGAAAAGGAAGGTTGGATGTGGTTTTATTCAATGATTGACGAGTATAACATTACTCCAACAGTGGCACATTATGCTTGTATGGTGGAGTTGCTTGCTAGGCAGGGAAAAATTAGAGAAGCTGTTGAATTTGTAAAGAAAATGGCAGTAGAACCTGATACAAGAATCTGGGGTGCTCTTTTTGCTGGTTGTAAATTAACTCATGGGTTCTCTGACATCGCTGATTCTATTGTTCAACAGCTCAATGCTTTAGAACCAAACAATTCTGACTTTCATGCAATGTTGCACAACTTTTGTGCTGAGTAA

mRNA sequence

ATGCTGTGCTTTTCAAGATGTGCACGCAACCTGTTTGTCAAAAGTCCCCAAAGAAAAAATTACACGATAGGTTCTGTGATCGATGATACTTCAGCCAAAAAACAAGCATATTACGAAGACCCAGTTGGATTCTTCGCAAAACAAGAGGATGTAATATCTTGGACGTCTAAAATCACCAATTTGGTAAGAACAGGCCAGCCGGATTCGGCTTTTGGCTTCTTCAAGATGATGTTCGCAAATGGGCACAGGCCAAATCATGTGACAATGCTGAGCGTATTAAGAGCGATTGACGCATTAAGCTGGGAATCAACGATTGAGGTGATGCATGGAGGAGTGATCAAAATGGGGTTTGAATCAGAAGTGGCAGTTTCAACGGCTCTTCTTGGGTTTTACTCAATGCGTGATATTGGGATCGTTTGGAAGTTGTTTTATCAGATACCTTATAAGGATGTTGTTTTGTGGAGTGCTGTGATCTCGGCATGCGTGAAACATGGCCAGTTTAGTGAAGCATTTCATCTTTTCAGAGAGATGCAATATCAAGGTGTTCATCCAAACCATGTAAGCATTGTAAGCATTCTACCTGCTTGTGCTGATTTTGGTGCTCTATCTTTGGGTAAAGAGATTCATGCGTTTTCAATGAGAAGGGATTTTTATTCTATAGTTAACATTCAGAACTCACTCATGGATATGTATTCAAAATGTAGAAATCTTGAGGCATCAATTAGAGTTTTGAAAACGATGAGGAAAAAGGACATGGTGTCATGGAGAACTGTAACTCATGCGTGTATCCAGAACAATTGTCCTAGTAAAGCCTTTAAAATTTTCACAAGGATGCGGTCTTTTGGATTCGAATTGGGCGAAACGATGATGCTGGACTTTATAGCTGCTGTGTTATTAGTTGATGAACTTGTACTTGGCTTGGCTGTTCATTGTTATGCGCTGAAAGGTGGTTTTCTCTGTTTTATTTCAGTTGGAACTGAACTGCTCCAAATGTATGCTAAATTTGGTGAATTGGGGTTGGCCAAACTTACATTTGATGAGCTTGTTGACAAAGATATCATTGCATGGAGCGCAATGATCTCAGCATACTCTCATGGTGAAGAACCACTTAGTGCCATCCAGTCATTTAAAGTGATGCAATCAACTAATGAAAGGCCTAATGCCATAACTTTTGTAAGTCTAGTGAATGCCTGTTCTTCATTGGATGCTCAGGAACTGGGAGAAAGTATACACGCTCATATAACGAAATCTGGTTACTCGTCTAATACACGTTTGATGTCTGCTCTGCTTGATTTTTACTGCATACTTAGAAGGGTAAAGCTAGGAGAACATGTTTTTTATGAGATTGTGACAAAGGATTTAGTTTGTTGGAGTACGATGATTAAAGGGTATGGTACGAATGGCTGCGGGAATGAGGCACTCAATACATTCTCAGACATGTTAAGTTATGGTTTGAAGCCGAATGGGACGCTCTTCGTTTCTCTTTTATCTGCTTGTGCTCAATGTGGATTGGAAAAGGAAGGTTGGATGTGGTTTTATTCAATGATTGACGAGTATAACATTACTCCAACAGTGGCACATTATGCTTGTATGGTGGAGTTGCTTGCTAGGCAGGGAAAAATTAGAGAAGCTGTTGAATTTGTAAAGAAAATGGCAGTAGAACCTGATACAAGAATCTGGGGTGCTCTTTTTGCTGGTTGTAAATTAACTCATGGGTTCTCTGACATCGCTGATTCTATTGTTCAACAGCTCAATGCTTTAGAACCAAACAATTCTGACTTTCATGCAATGTTGCACAACTTTTGTGCTGAGTAA

Coding sequence (CDS)

ATGCTGTGCTTTTCAAGATGTGCACGCAACCTGTTTGTCAAAAGTCCCCAAAGAAAAAATTACACGATAGGTTCTGTGATCGATGATACTTCAGCCAAAAAACAAGCATATTACGAAGACCCAGTTGGATTCTTCGCAAAACAAGAGGATGTAATATCTTGGACGTCTAAAATCACCAATTTGGTAAGAACAGGCCAGCCGGATTCGGCTTTTGGCTTCTTCAAGATGATGTTCGCAAATGGGCACAGGCCAAATCATGTGACAATGCTGAGCGTATTAAGAGCGATTGACGCATTAAGCTGGGAATCAACGATTGAGGTGATGCATGGAGGAGTGATCAAAATGGGGTTTGAATCAGAAGTGGCAGTTTCAACGGCTCTTCTTGGGTTTTACTCAATGCGTGATATTGGGATCGTTTGGAAGTTGTTTTATCAGATACCTTATAAGGATGTTGTTTTGTGGAGTGCTGTGATCTCGGCATGCGTGAAACATGGCCAGTTTAGTGAAGCATTTCATCTTTTCAGAGAGATGCAATATCAAGGTGTTCATCCAAACCATGTAAGCATTGTAAGCATTCTACCTGCTTGTGCTGATTTTGGTGCTCTATCTTTGGGTAAAGAGATTCATGCGTTTTCAATGAGAAGGGATTTTTATTCTATAGTTAACATTCAGAACTCACTCATGGATATGTATTCAAAATGTAGAAATCTTGAGGCATCAATTAGAGTTTTGAAAACGATGAGGAAAAAGGACATGGTGTCATGGAGAACTGTAACTCATGCGTGTATCCAGAACAATTGTCCTAGTAAAGCCTTTAAAATTTTCACAAGGATGCGGTCTTTTGGATTCGAATTGGGCGAAACGATGATGCTGGACTTTATAGCTGCTGTGTTATTAGTTGATGAACTTGTACTTGGCTTGGCTGTTCATTGTTATGCGCTGAAAGGTGGTTTTCTCTGTTTTATTTCAGTTGGAACTGAACTGCTCCAAATGTATGCTAAATTTGGTGAATTGGGGTTGGCCAAACTTACATTTGATGAGCTTGTTGACAAAGATATCATTGCATGGAGCGCAATGATCTCAGCATACTCTCATGGTGAAGAACCACTTAGTGCCATCCAGTCATTTAAAGTGATGCAATCAACTAATGAAAGGCCTAATGCCATAACTTTTGTAAGTCTAGTGAATGCCTGTTCTTCATTGGATGCTCAGGAACTGGGAGAAAGTATACACGCTCATATAACGAAATCTGGTTACTCGTCTAATACACGTTTGATGTCTGCTCTGCTTGATTTTTACTGCATACTTAGAAGGGTAAAGCTAGGAGAACATGTTTTTTATGAGATTGTGACAAAGGATTTAGTTTGTTGGAGTACGATGATTAAAGGGTATGGTACGAATGGCTGCGGGAATGAGGCACTCAATACATTCTCAGACATGTTAAGTTATGGTTTGAAGCCGAATGGGACGCTCTTCGTTTCTCTTTTATCTGCTTGTGCTCAATGTGGATTGGAAAAGGAAGGTTGGATGTGGTTTTATTCAATGATTGACGAGTATAACATTACTCCAACAGTGGCACATTATGCTTGTATGGTGGAGTTGCTTGCTAGGCAGGGAAAAATTAGAGAAGCTGTTGAATTTGTAAAGAAAATGGCAGTAGAACCTGATACAAGAATCTGGGGTGCTCTTTTTGCTGGTTGTAAATTAACTCATGGGTTCTCTGACATCGCTGATTCTATTGTTCAACAGCTCAATGCTTTAGAACCAAACAATTCTGACTTTCATGCAATGTTGCACAACTTTTGTGCTGAGTAA

Protein sequence

MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHNFCAE
BLAST of Carg24643 vs. NCBI nr
Match: XP_023538701.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023538702.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023538703.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023538704.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1190.6 bits (3079), Expect = 0.0e+00
Identity = 588/604 (97.35%), Postives = 596/604 (98.68%), Query Frame = 0

Query: 1   MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN 60
           MLCFSRCAR LFVKSPQRKNYTIG VID TSAKKQAYYEDPVGFFA+QEDVISWTSKITN
Sbjct: 1   MLCFSRCARYLFVKSPQRKNYTIGLVIDATSAKKQAYYEDPVGFFAQQEDVISWTSKITN 60

Query: 61  LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
           LVRTGQPDSAFGFFKMMFANGHRPN+VTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE
Sbjct: 61  LVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120

Query: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQ 180
           VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQF EAFHLFREMQYQ
Sbjct: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFIEAFHLFREMQYQ 180

Query: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
           GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS
Sbjct: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240

Query: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
           IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV
Sbjct: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300

Query: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
           DEL+LGLAVHC+ALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI
Sbjct: 301 DELLLGLAVHCHALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360

Query: 361 SAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
           SAYSHGEEPLSAIQ+FK+MQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS
Sbjct: 361 SAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420

Query: 421 SNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480
           SNT LMSAL+DFYCILRRVKLGEHVF EIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM
Sbjct: 421 SNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480

Query: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQGK 540
           LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWF +MIDEYNITPTVAHYACMVELLARQGK
Sbjct: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAMIDEYNITPTVAHYACMVELLARQGK 540

Query: 541 IREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHN 600
           IREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHN
Sbjct: 541 IREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHN 600

Query: 601 FCAE 605
           FC E
Sbjct: 601 FCIE 604

BLAST of Carg24643 vs. NCBI nr
Match: XP_022974593.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita maxima] >XP_022974594.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 1179.9 bits (3051), Expect = 0.0e+00
Identity = 585/604 (96.85%), Postives = 592/604 (98.01%), Query Frame = 0

Query: 1   MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN 60
           MLCFSRCARNLFVK+PQRKNYTIG VID TSAKKQAYYEDPVGFFA+QEDVISWTSKITN
Sbjct: 1   MLCFSRCARNLFVKNPQRKNYTIGPVIDATSAKKQAYYEDPVGFFAQQEDVISWTSKITN 60

Query: 61  LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
           LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE
Sbjct: 61  LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120

Query: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQ 180
           VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVK+GQF EAFHLFREMQYQ
Sbjct: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKNGQFIEAFHLFREMQYQ 180

Query: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
           GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS
Sbjct: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240

Query: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
           IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV
Sbjct: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300

Query: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
           DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI
Sbjct: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360

Query: 361 SAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
           SAYSHGEEPLS IQ+FK+MQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS
Sbjct: 361 SAYSHGEEPLSVIQTFKMMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420

Query: 421 SNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480
           SNTRLMSAL+DFYCILRRVKLGEHVF EI+TKDLVCWSTMIKGYG NG GNEALNTFSDM
Sbjct: 421 SNTRLMSALVDFYCILRRVKLGEHVFDEILTKDLVCWSTMIKGYGMNGYGNEALNTFSDM 480

Query: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQGK 540
           LSYGLK NGTLFVSLLSACAQCGLEKEGWMWF SMIDEYNITPTVAHYACMVELLARQGK
Sbjct: 481 LSYGLKLNGTLFVSLLSACAQCGLEKEGWMWFNSMIDEYNITPTVAHYACMVELLARQGK 540

Query: 541 IREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHN 600
           IREAVEFV KMAVEPDTRI GALFAGCKL HGFSDIADSIVQQLNALEPNNSDFHAMLHN
Sbjct: 541 IREAVEFVNKMAVEPDTRICGALFAGCKLNHGFSDIADSIVQQLNALEPNNSDFHAMLHN 600

Query: 601 FCAE 605
           FCAE
Sbjct: 601 FCAE 604

BLAST of Carg24643 vs. NCBI nr
Match: XP_022934182.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 1144.4 bits (2959), Expect = 0.0e+00
Identity = 570/586 (97.27%), Postives = 575/586 (98.12%), Query Frame = 0

Query: 1   MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN 60
           MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN
Sbjct: 1   MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN 60

Query: 61  LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
           LVRTGQPDSAFGFFKMMFANGHRPN+VTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE
Sbjct: 61  LVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120

Query: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQ 180
           VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQ SEAFHLFREMQYQ
Sbjct: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQCSEAFHLFREMQYQ 180

Query: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
           GV PNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS
Sbjct: 181 GVRPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240

Query: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
           IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV
Sbjct: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300

Query: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
           DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI
Sbjct: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360

Query: 361 SAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
           SAYSHGEEPLSAIQ+FK+MQSTNERPNAITF SLVNACSSLDAQELGESIHAHITKSGYS
Sbjct: 361 SAYSHGEEPLSAIQTFKMMQSTNERPNAITFGSLVNACSSLDAQELGESIHAHITKSGYS 420

Query: 421 SNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480
           SNTRLMSAL+DFYCILRRVKLGEHVFYEI+TKDLVCWSTMIKGYG NG G EALNTFSDM
Sbjct: 421 SNTRLMSALVDFYCILRRVKLGEHVFYEILTKDLVCWSTMIKGYGMNGYGKEALNTFSDM 480

Query: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQGK 540
           LSYGLKPNGTLFVSLLSACAQCGLEK GWMWF SMIDEYNITPTVAHYACMVELLARQGK
Sbjct: 481 LSYGLKPNGTLFVSLLSACAQCGLEKAGWMWFNSMIDEYNITPTVAHYACMVELLARQGK 540

Query: 541 IREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNA 587
           I   VEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNA
Sbjct: 541 I---VEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNA 583

BLAST of Carg24643 vs. NCBI nr
Match: XP_022147491.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X1 [Momordica charantia] >XP_022147492.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 1056.6 bits (2731), Expect = 3.2e-305
Identity = 516/605 (85.29%), Postives = 559/605 (92.40%), Query Frame = 0

Query: 1   MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSA-KKQAYYEDPVGFFAKQEDVISWTSKIT 60
           MLCFSRCARNLFVKSPQRKNY I  +++ TS+ KKQAYYEDPVGF+A++EDVISWTSKIT
Sbjct: 1   MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKIT 60

Query: 61  NLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFES 120
           NLVRTGQ ++AFGFFK MFANGHRPNHVTMLSV+RAIDALSWES  EV+HGGVIKMGFES
Sbjct: 61  NLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFES 120

Query: 121 EVAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQY 180
           EVAVSTALLGFYS RDIG VWKLFYQIPYKD+VLWSA+ISACVK+GQF EA  LFREMQY
Sbjct: 121 EVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQY 180

Query: 181 QGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEA 240
           QGV PNHVSIVS+LPACAD G +SLGKEIH FSMRRDFYS+VNIQNSLMDMYSKCRNLEA
Sbjct: 181 QGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEA 240

Query: 241 SIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLL 300
           SIRVLK MRKKDMVSWRTVT+ACIQNNCPSKAFKIF+RMRSFGFELG+TMML  IAAVLL
Sbjct: 241 SIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAAVLL 300

Query: 301 VDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAM 360
           V+EL+LGLAVHCYALKGGFLCFI+VGTE+LQMYAKFG LGLAKL FDELVDKDIIAWSAM
Sbjct: 301 VEELLLGLAVHCYALKGGFLCFIAVGTEILQMYAKFGHLGLAKLIFDELVDKDIIAWSAM 360

Query: 361 ISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGY 420
           ISAYSHGE+PL+AIQ+FK+MQSTNE+PN ITFVSLVNACSSL AQELGESIHAHI KSG 
Sbjct: 361 ISAYSHGEDPLNAIQTFKMMQSTNEKPNEITFVSLVNACSSLGAQELGESIHAHIMKSGC 420

Query: 421 SSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSD 480
           SSNT LMSA +D YC L R+K G+HVF EI TKDL+CWSTMIKGYG NGCGNEAL+TFSD
Sbjct: 421 SSNTHLMSAFVDLYCTLGRIKQGKHVFDEISTKDLICWSTMIKGYGMNGCGNEALDTFSD 480

Query: 481 MLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQG 540
           MLS GLKPNG LFVSLLSACAQCG+EKEGW+WF SMID+YNITPTVAHYACMV+LL RQG
Sbjct: 481 MLSCGLKPNGVLFVSLLSACAQCGIEKEGWVWFRSMIDKYNITPTVAHYACMVDLLVRQG 540

Query: 541 KIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLH 600
           KIREAVEFVKKM VEPDTRIWGALF GCKLTHGF DI DSIV+QL A+EPNNS+F+AML 
Sbjct: 541 KIREAVEFVKKMPVEPDTRIWGALFTGCKLTHGFPDIVDSIVEQLTAMEPNNSNFYAMLL 600

Query: 601 NFCAE 605
           +FCAE
Sbjct: 601 DFCAE 605

BLAST of Carg24643 vs. NCBI nr
Match: XP_022147493.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 995.0 bits (2571), Expect = 1.1e-286
Identity = 493/605 (81.49%), Postives = 531/605 (87.77%), Query Frame = 0

Query: 1   MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSA-KKQAYYEDPVGFFAKQEDVISWTSKIT 60
           MLCFSRCARNLFVKSPQRKNY I  +++ TS+ KKQAYYEDPVGF+A++EDVISWTSKIT
Sbjct: 1   MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKIT 60

Query: 61  NLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFES 120
           NLVRTGQ ++AFGFFK MFANGHRPNHVTMLSV+RAIDALSWES  EV+HGGVIKMGFES
Sbjct: 61  NLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFES 120

Query: 121 EVAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQY 180
           EVAVSTALLGFYS RDIG VWKLFYQIPYKD+VLWSA+ISACVK+GQF EA  LFREMQY
Sbjct: 121 EVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQY 180

Query: 181 QGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEA 240
           QGV PNHVSIVS+LPACAD G +SLGKEIH FSMRRDFYS+VNIQNSLMDMYSKCRNLEA
Sbjct: 181 QGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEA 240

Query: 241 SIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLL 300
           SIRVLK MRKKDMVSWRTVT+ACIQNNCPSKAFKIF+RMRSFGFELG+TMML  IAAVLL
Sbjct: 241 SIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAAVLL 300

Query: 301 VDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAM 360
           V+EL+LGLAVHCYALKGGFLCFI+VGTE+LQMYAKFG LGLAKL FDELVDKDIIAWSAM
Sbjct: 301 VEELLLGLAVHCYALKGGFLCFIAVGTEILQMYAKFGHLGLAKLIFDELVDKDIIAWSAM 360

Query: 361 ISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGY 420
           ISAYSH                             VNACSSL AQELGESIHAHI KSG 
Sbjct: 361 ISAYSH-----------------------------VNACSSLGAQELGESIHAHIMKSGC 420

Query: 421 SSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSD 480
           SSNT LMSA +D YC L R+K G+HVF EI TKDL+CWSTMIKGYG NGCGNEAL+TFSD
Sbjct: 421 SSNTHLMSAFVDLYCTLGRIKQGKHVFDEISTKDLICWSTMIKGYGMNGCGNEALDTFSD 480

Query: 481 MLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQG 540
           MLS GLKPNG LFVSLLSACAQCG+EKEGW+WF SMID+YNITPTVAHYACMV+LL RQG
Sbjct: 481 MLSCGLKPNGVLFVSLLSACAQCGIEKEGWVWFRSMIDKYNITPTVAHYACMVDLLVRQG 540

Query: 541 KIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLH 600
           KIREAVEFVKKM VEPDTRIWGALF GCKLTHGF DI DSIV+QL A+EPNNS+F+AML 
Sbjct: 541 KIREAVEFVKKMPVEPDTRIWGALFTGCKLTHGFPDIVDSIVEQLTAMEPNNSNFYAMLL 576

Query: 601 NFCAE 605
           +FCAE
Sbjct: 601 DFCAE 576

BLAST of Carg24643 vs. TAIR10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 298.9 bits (764), Expect = 7.1e-81
Identity = 160/550 (29.09%), Postives = 294/550 (53.45%), Query Frame = 0

Query: 52  ISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGG 111
           + + + +    +    D A  FF  M  +   P       +L+     +     + +HG 
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160

Query: 112 VIKMGFESEVAVSTALLGFYS-MRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEA 171
           ++K GF  ++   T L   Y+  R +    K+F ++P +D+V W+ +++   ++G    A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220

Query: 172 FHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDM 231
             + + M  + + P+ ++IVS+LPA +    +S+GKEIH ++MR  F S+VNI  +L+DM
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280

Query: 232 YSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMM 291
           Y+KC +LE + ++   M ++++VSW ++  A +QN  P +A  IF +M   G +  +  +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340

Query: 292 LDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVD 351
           +  + A   + +L  G  +H  +++ G    +SV   L+ MY K  E+  A   F +L  
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400

Query: 352 KDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESI 411
           + +++W+AMI  ++    P+ A+  F  M+S   +P+  T+VS++ A + L      + I
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460

Query: 412 HAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCG 471
           H  + +S    N  + +AL+D Y     + +   +F  +  + +  W+ MI GYGT+G G
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520

Query: 472 NEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYAC 531
             AL  F +M    +KPNG  F+S++SAC+  GL + G   FY M + Y+I  ++ HY  
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580

Query: 532 MVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPN 591
           MV+LL R G++ EA +F+ +M V+P   ++GA+   C++ H   + A+   ++L  L P+
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI-HKNVNFAEKAAERLFELNPD 640

Query: 592 NSDFHAMLHN 601
           +  +H +L N
Sbjct: 641 DGGYHVLLAN 649

BLAST of Carg24643 vs. TAIR10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 293.5 bits (750), Expect = 3.0e-79
Identity = 166/567 (29.28%), Postives = 292/567 (51.50%), Query Frame = 0

Query: 37  YYEDPVGFFAKQEDVISWTSKITNLVRTGQPDSAFGFF-KMMFANGHRPNHVTMLSVLRA 96
           YY   +    ++ DV  +   +        P S+   F  +  +   +PN  T    + A
Sbjct: 69  YYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISA 128

Query: 97  IDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFY-SMRDIGIVWKLFYQIPYKDVVLW 156
                 +    V+HG  +  G +SE+ + + ++  Y     +    K+F ++P KD +LW
Sbjct: 129 ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188

Query: 157 SAVISACVKHGQFSEAFHLFREMQYQG-VHPNHVSIVSILPACADFGALSLGKEIHAFSM 216
           + +IS   K+  + E+  +FR++  +     +  +++ ILPA A+   L LG +IH+ + 
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLAT 248

Query: 217 RRDFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFK 276
           +   YS   +    + +YSKC  ++    + +  RK D+V++  + H    N     +  
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLS 308

Query: 277 IFTRMRSFGFELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYA 336
           +F  +   G  L  + +   ++ V +   L+L  A+H Y LK  FL   SV T L  +Y+
Sbjct: 309 LFKELMLSGARLRSSTL---VSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYS 368

Query: 337 KFGELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVS 396
           K  E+  A+  FDE  +K + +W+AMIS Y+       AI  F+ MQ +   PN +T   
Sbjct: 369 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITC 428

Query: 397 LVNACSSLDAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKD 456
           +++AC+ L A  LG+ +H  +  + + S+  + +AL+  Y     +     +F  +  K+
Sbjct: 429 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 488

Query: 457 LVCWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFY 516
            V W+TMI GYG +G G EALN F +ML+ G+ P    F+ +L AC+  GL KEG   F 
Sbjct: 489 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 548

Query: 517 SMIDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGF 576
           SMI  Y   P+V HYACMV++L R G ++ A++F++ M++EP + +W  L   C++ H  
Sbjct: 549 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI-HKD 608

Query: 577 SDIADSIVQQLNALEPNNSDFHAMLHN 601
           +++A ++ ++L  L+P+N  +H +L N
Sbjct: 609 TNLARTVSEKLFELDPDNVGYHVLLSN 631

BLAST of Carg24643 vs. TAIR10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 290.4 bits (742), Expect = 2.5e-78
Identity = 170/557 (30.52%), Postives = 278/557 (49.91%), Query Frame = 0

Query: 48  QEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEV 107
           Q D +++ + I  L + G  + A   FK M  +G  P+  T+ S++ A  A       + 
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410

Query: 108 MHGGVIKMGFESEVAVSTALLGFYS-MRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQ 167
           +H    K+GF S   +  ALL  Y+   DI      F +   ++VVLW+ ++ A      
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470

Query: 168 FSEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNS 227
              +F +FR+MQ + + PN  +  SIL  C   G L LG++IH+  ++ +F     + + 
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530

Query: 228 LMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELG 287
           L+DMY+K   L+ +  +L     KD+VSW T+     Q N   KA   F +M   G    
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590

Query: 288 ETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFD 347
           E  + + ++A   +  L  G  +H  A   GF   +     L+ +Y++ G++  + L F+
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE 650

Query: 348 ELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQEL 407
           +    D IAW+A++S +        A++ F  M       N  TF S V A S     + 
Sbjct: 651 QTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQ 710

Query: 408 GESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGT 467
           G+ +HA ITK+GY S T + +AL+  Y     +   E  F E+ TK+ V W+ +I  Y  
Sbjct: 711 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770

Query: 468 NGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVA 527
           +G G+EAL++F  M+   ++PN    V +LSAC+  GL  +G  +F SM  EY ++P   
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 830

Query: 528 HYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNA 587
           HY C+V++L R G +  A EF+++M ++PD  +W  L + C + H   +I +     L  
Sbjct: 831 HYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSAC-VVHKNMEIGEFAAHHLLE 890

Query: 588 LEPNNSDFHAMLHNFCA 604
           LEP +S  + +L N  A
Sbjct: 891 LEPEDSATYVLLSNLYA 906

BLAST of Carg24643 vs. TAIR10
Match: AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 287.0 bits (733), Expect = 2.8e-77
Identity = 169/579 (29.19%), Postives = 292/579 (50.43%), Query Frame = 0

Query: 28  DDTSAKKQAYYEDPVGFFAKQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHV 87
           DD SA ++ +       F ++ D + W S +++   +G+       F+ M   G  PN  
Sbjct: 231 DDLSAARRLF-----DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 290

Query: 88  TMLSVLRAIDALSWESTIEVMHGGVIKMG-FESEVAVSTALLGFYS-MRDIGIVWKLFYQ 147
           T++S L A D  S+    + +H  V+K     SE+ V  AL+  Y+    +    ++  Q
Sbjct: 291 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 350

Query: 148 IPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLG 207
           +   DVV W+++I   V++  + EA   F +M   G   + VS+ SI+ A      L  G
Sbjct: 351 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 410

Query: 208 KEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQN 267
            E+HA+ ++  + S + + N+L+DMYSKC       R    M  KD++SW TV     QN
Sbjct: 411 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 470

Query: 268 NCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVG 327
           +C  +A ++F  +     E+ E ++   + A  ++  +++   +HC+ L+ G L  + + 
Sbjct: 471 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQ 530

Query: 328 TELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNER 387
            EL+ +Y K   +G A   F+ +  KD+++W++MIS+ +       A++ F+ M  T   
Sbjct: 531 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 590

Query: 388 PNAITFVSLVNACSSLDAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHV 447
            +++  + +++A +SL A   G  IH ++ + G+     +  A++D Y     ++  + V
Sbjct: 591 ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAV 650

Query: 448 FYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLE 507
           F  I  K L+ +++MI  YG +GCG  A+  F  M    + P+   F++LL AC+  GL 
Sbjct: 651 FDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLL 710

Query: 508 KEGWMWFYSMIDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFA 567
            EG  +   M  EY + P   HY C+V++L R   + EA EFVK M  EP   +W AL A
Sbjct: 711 DEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLA 770

Query: 568 GCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHNFCAE 605
            C+ +H   +I +   Q+L  LEP N     ++ N  AE
Sbjct: 771 ACR-SHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAE 802

BLAST of Carg24643 vs. TAIR10
Match: AT3G53360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 285.8 bits (730), Expect = 6.2e-77
Identity = 166/557 (29.80%), Postives = 279/557 (50.09%), Query Frame = 0

Query: 45  FAKQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWEST 104
           F  + +++S+TS IT   + GQ   A   +  M      P+     S+++A  + S    
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186

Query: 105 IEVMHGGVIKMGFESEVAVSTALLGFY-SMRDIGIVWKLFYQIPYKDVVLWSAVISACVK 164
            + +H  VIK+   S +    AL+  Y     +    ++FY IP KD++ WS++I+   +
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246

Query: 165 HGQFSEAFHLFREMQYQGV-HPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVN 224
            G   EA    +EM   GV HPN     S L AC+       G +IH   ++ +      
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306

Query: 225 IQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFG 284
              SL DMY++C  L ++ RV   + + D  SW  +      N    +A  +F++MRS G
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366

Query: 285 FELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAK 344
           F      +   + A      L  G+ +H Y +K GFL  ++V   LL MY    +L    
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426

Query: 345 LTFDELVDK-DIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSL 404
             F++  +  D ++W+ +++A    E+P+  ++ FK+M  +   P+ IT  +L+  C  +
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 486

Query: 405 DAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMI 464
            + +LG  +H +  K+G +    + + L+D Y     +     +F  +  +D+V WST+I
Sbjct: 487 SSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLI 546

Query: 465 KGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNI 524
            GY  +G G EAL  F +M S G++PN   FV +L+AC+  GL +EG   + +M  E+ I
Sbjct: 547 VGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGI 606

Query: 525 TPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIV 584
           +PT  H +C+V+LLAR G++ EA  F+ +M +EPD  +W  L + CK T G   +A    
Sbjct: 607 SPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACK-TQGNVHLAQKAA 666

Query: 585 QQLNALEPNNSDFHAML 599
           + +  ++P NS  H +L
Sbjct: 667 ENILKIDPFNSTAHVLL 682

BLAST of Carg24643 vs. Swiss-Prot
Match: sp|Q3E6Q1|PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.3e-79
Identity = 160/550 (29.09%), Postives = 294/550 (53.45%), Query Frame = 0

Query: 52  ISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGG 111
           + + + +    +    D A  FF  M  +   P       +L+     +     + +HG 
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160

Query: 112 VIKMGFESEVAVSTALLGFYS-MRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEA 171
           ++K GF  ++   T L   Y+  R +    K+F ++P +D+V W+ +++   ++G    A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220

Query: 172 FHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDM 231
             + + M  + + P+ ++IVS+LPA +    +S+GKEIH ++MR  F S+VNI  +L+DM
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280

Query: 232 YSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMM 291
           Y+KC +LE + ++   M ++++VSW ++  A +QN  P +A  IF +M   G +  +  +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340

Query: 292 LDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVD 351
           +  + A   + +L  G  +H  +++ G    +SV   L+ MY K  E+  A   F +L  
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400

Query: 352 KDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESI 411
           + +++W+AMI  ++    P+ A+  F  M+S   +P+  T+VS++ A + L      + I
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460

Query: 412 HAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCG 471
           H  + +S    N  + +AL+D Y     + +   +F  +  + +  W+ MI GYGT+G G
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520

Query: 472 NEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYAC 531
             AL  F +M    +KPNG  F+S++SAC+  GL + G   FY M + Y+I  ++ HY  
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580

Query: 532 MVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPN 591
           MV+LL R G++ EA +F+ +M V+P   ++GA+   C++ H   + A+   ++L  L P+
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI-HKNVNFAEKAAERLFELNPD 640

Query: 592 NSDFHAMLHN 601
           +  +H +L N
Sbjct: 641 DGGYHVLLAN 649

BLAST of Carg24643 vs. Swiss-Prot
Match: sp|Q9SUH6|PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.3e-78
Identity = 166/567 (29.28%), Postives = 292/567 (51.50%), Query Frame = 0

Query: 37  YYEDPVGFFAKQEDVISWTSKITNLVRTGQPDSAFGFF-KMMFANGHRPNHVTMLSVLRA 96
           YY   +    ++ DV  +   +        P S+   F  +  +   +PN  T    + A
Sbjct: 69  YYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISA 128

Query: 97  IDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFY-SMRDIGIVWKLFYQIPYKDVVLW 156
                 +    V+HG  +  G +SE+ + + ++  Y     +    K+F ++P KD +LW
Sbjct: 129 ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188

Query: 157 SAVISACVKHGQFSEAFHLFREMQYQG-VHPNHVSIVSILPACADFGALSLGKEIHAFSM 216
           + +IS   K+  + E+  +FR++  +     +  +++ ILPA A+   L LG +IH+ + 
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLAT 248

Query: 217 RRDFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFK 276
           +   YS   +    + +YSKC  ++    + +  RK D+V++  + H    N     +  
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLS 308

Query: 277 IFTRMRSFGFELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYA 336
           +F  +   G  L  + +   ++ V +   L+L  A+H Y LK  FL   SV T L  +Y+
Sbjct: 309 LFKELMLSGARLRSSTL---VSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYS 368

Query: 337 KFGELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVS 396
           K  E+  A+  FDE  +K + +W+AMIS Y+       AI  F+ MQ +   PN +T   
Sbjct: 369 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITC 428

Query: 397 LVNACSSLDAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKD 456
           +++AC+ L A  LG+ +H  +  + + S+  + +AL+  Y     +     +F  +  K+
Sbjct: 429 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 488

Query: 457 LVCWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFY 516
            V W+TMI GYG +G G EALN F +ML+ G+ P    F+ +L AC+  GL KEG   F 
Sbjct: 489 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 548

Query: 517 SMIDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGF 576
           SMI  Y   P+V HYACMV++L R G ++ A++F++ M++EP + +W  L   C++ H  
Sbjct: 549 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI-HKD 608

Query: 577 SDIADSIVQQLNALEPNNSDFHAMLHN 601
           +++A ++ ++L  L+P+N  +H +L N
Sbjct: 609 TNLARTVSEKLFELDPDNVGYHVLLSN 631

BLAST of Carg24643 vs. Swiss-Prot
Match: sp|Q9SVP7|PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 290.4 bits (742), Expect = 4.5e-77
Identity = 170/557 (30.52%), Postives = 278/557 (49.91%), Query Frame = 0

Query: 48  QEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEV 107
           Q D +++ + I  L + G  + A   FK M  +G  P+  T+ S++ A  A       + 
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410

Query: 108 MHGGVIKMGFESEVAVSTALLGFYS-MRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQ 167
           +H    K+GF S   +  ALL  Y+   DI      F +   ++VVLW+ ++ A      
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470

Query: 168 FSEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNS 227
              +F +FR+MQ + + PN  +  SIL  C   G L LG++IH+  ++ +F     + + 
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530

Query: 228 LMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELG 287
           L+DMY+K   L+ +  +L     KD+VSW T+     Q N   KA   F +M   G    
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590

Query: 288 ETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFD 347
           E  + + ++A   +  L  G  +H  A   GF   +     L+ +Y++ G++  + L F+
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE 650

Query: 348 ELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQEL 407
           +    D IAW+A++S +        A++ F  M       N  TF S V A S     + 
Sbjct: 651 QTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQ 710

Query: 408 GESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGT 467
           G+ +HA ITK+GY S T + +AL+  Y     +   E  F E+ TK+ V W+ +I  Y  
Sbjct: 711 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770

Query: 468 NGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVA 527
           +G G+EAL++F  M+   ++PN    V +LSAC+  GL  +G  +F SM  EY ++P   
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 830

Query: 528 HYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNA 587
           HY C+V++L R G +  A EF+++M ++PD  +W  L + C + H   +I +     L  
Sbjct: 831 HYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSAC-VVHKNMEIGEFAAHHLLE 890

Query: 588 LEPNNSDFHAMLHNFCA 604
           LEP +S  + +L N  A
Sbjct: 891 LEPEDSATYVLLSNLYA 906

BLAST of Carg24643 vs. Swiss-Prot
Match: sp|Q9M1V3|PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)

HSP 1 Score: 287.0 bits (733), Expect = 5.0e-76
Identity = 169/579 (29.19%), Postives = 292/579 (50.43%), Query Frame = 0

Query: 28  DDTSAKKQAYYEDPVGFFAKQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHV 87
           DD SA ++ +       F ++ D + W S +++   +G+       F+ M   G  PN  
Sbjct: 231 DDLSAARRLF-----DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 290

Query: 88  TMLSVLRAIDALSWESTIEVMHGGVIKMG-FESEVAVSTALLGFYS-MRDIGIVWKLFYQ 147
           T++S L A D  S+    + +H  V+K     SE+ V  AL+  Y+    +    ++  Q
Sbjct: 291 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 350

Query: 148 IPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLG 207
           +   DVV W+++I   V++  + EA   F +M   G   + VS+ SI+ A      L  G
Sbjct: 351 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 410

Query: 208 KEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQN 267
            E+HA+ ++  + S + + N+L+DMYSKC       R    M  KD++SW TV     QN
Sbjct: 411 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 470

Query: 268 NCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVG 327
           +C  +A ++F  +     E+ E ++   + A  ++  +++   +HC+ L+ G L  + + 
Sbjct: 471 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQ 530

Query: 328 TELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNER 387
            EL+ +Y K   +G A   F+ +  KD+++W++MIS+ +       A++ F+ M  T   
Sbjct: 531 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 590

Query: 388 PNAITFVSLVNACSSLDAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHV 447
            +++  + +++A +SL A   G  IH ++ + G+     +  A++D Y     ++  + V
Sbjct: 591 ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAV 650

Query: 448 FYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLE 507
           F  I  K L+ +++MI  YG +GCG  A+  F  M    + P+   F++LL AC+  GL 
Sbjct: 651 FDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLL 710

Query: 508 KEGWMWFYSMIDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFA 567
            EG  +   M  EY + P   HY C+V++L R   + EA EFVK M  EP   +W AL A
Sbjct: 711 DEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLA 770

Query: 568 GCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHNFCAE 605
            C+ +H   +I +   Q+L  LEP N     ++ N  AE
Sbjct: 771 ACR-SHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAE 802

BLAST of Carg24643 vs. Swiss-Prot
Match: sp|Q9LFI1|PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E86 PE=2 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.1e-75
Identity = 166/557 (29.80%), Postives = 279/557 (50.09%), Query Frame = 0

Query: 45  FAKQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWEST 104
           F  + +++S+TS IT   + GQ   A   +  M      P+     S+++A  + S    
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186

Query: 105 IEVMHGGVIKMGFESEVAVSTALLGFY-SMRDIGIVWKLFYQIPYKDVVLWSAVISACVK 164
            + +H  VIK+   S +    AL+  Y     +    ++FY IP KD++ WS++I+   +
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246

Query: 165 HGQFSEAFHLFREMQYQGV-HPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVN 224
            G   EA    +EM   GV HPN     S L AC+       G +IH   ++ +      
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306

Query: 225 IQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFG 284
              SL DMY++C  L ++ RV   + + D  SW  +      N    +A  +F++MRS G
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366

Query: 285 FELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAK 344
           F      +   + A      L  G+ +H Y +K GFL  ++V   LL MY    +L    
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426

Query: 345 LTFDELVDK-DIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSL 404
             F++  +  D ++W+ +++A    E+P+  ++ FK+M  +   P+ IT  +L+  C  +
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 486

Query: 405 DAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMI 464
            + +LG  +H +  K+G +    + + L+D Y     +     +F  +  +D+V WST+I
Sbjct: 487 SSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLI 546

Query: 465 KGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNI 524
            GY  +G G EAL  F +M S G++PN   FV +L+AC+  GL +EG   + +M  E+ I
Sbjct: 547 VGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGI 606

Query: 525 TPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIV 584
           +PT  H +C+V+LLAR G++ EA  F+ +M +EPD  +W  L + CK T G   +A    
Sbjct: 607 SPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACK-TQGNVHLAQKAA 666

Query: 585 QQLNALEPNNSDFHAML 599
           + +  ++P NS  H +L
Sbjct: 667 ENILKIDPFNSTAHVLL 682

BLAST of Carg24643 vs. TrEMBL
Match: tr|A0A1S4DSI8|A0A1S4DSI8_CUCME (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucumis melo OX=3656 GN=LOC103484166 PE=4 SV=1)

HSP 1 Score: 936.0 bits (2418), Expect = 4.2e-269
Identity = 459/571 (80.39%), Postives = 507/571 (88.79%), Query Frame = 0

Query: 1   MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN 60
           MLCFSRCARNLFV SP RKNYTI S++D TS KK+ Y+EDPV F+A++EDVISWTSKITN
Sbjct: 1   MLCFSRCARNLFVISPNRKNYTIRSMMDATSTKKRGYFEDPVEFYAQREDVISWTSKITN 60

Query: 61  LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
           LVR GQP+SAFGFFKMMF+NGHRPN+VTMLSV+RAIDALSW+S IEVMHG  IKMGFESE
Sbjct: 61  LVRAGQPESAFGFFKMMFSNGHRPNYVTMLSVIRAIDALSWDSMIEVMHGVTIKMGFESE 120

Query: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQ 180
           VAVSTALLGFYS+RDI  VWKLF QIP KDVV WSA+ISACVK+GQ+SEAF L REMQ Q
Sbjct: 121 VAVSTALLGFYSIRDIETVWKLFNQIPCKDVVFWSAIISACVKNGQYSEAFDLLREMQDQ 180

Query: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
           GV PN VSIVSILPACADFG LSLGKE+HAFSMR+DFYS+V+IQNSLMDMYSKCR  EAS
Sbjct: 181 GVQPNQVSIVSILPACADFGVLSLGKELHAFSMRKDFYSMVDIQNSLMDMYSKCRMFEAS 240

Query: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
           I+VLK MRKKD VSW+ +THACIQNN PS+ FKIF+RMRS GFEL ETM+LD I+AVLLV
Sbjct: 241 IKVLKLMRKKDAVSWKIITHACIQNNYPSEVFKIFSRMRSLGFELSETMVLDMISAVLLV 300

Query: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
           DEL+LGLAVHCYALKGGFLCFI VGTELLQMYAKFG+L LAKL FDELVDKDIIAWSAMI
Sbjct: 301 DELLLGLAVHCYALKGGFLCFILVGTELLQMYAKFGDLRLAKLVFDELVDKDIIAWSAMI 360

Query: 361 SAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
           S YSHGE+PL+AIQ+FK+MQSTNE+PN  TFVSL++ACSSL A+ELGESI AH  K GY+
Sbjct: 361 SVYSHGEDPLNAIQTFKMMQSTNEKPNERTFVSLMDACSSLGAKELGESIQAHTIKCGYT 420

Query: 421 SNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480
           SNT LMSAL+ FYC L R+KLGEHVF EI TKDL+CW+ MIKGYG NGCGN+ALNTFSDM
Sbjct: 421 SNTHLMSALVGFYCTLGRIKLGEHVFDEISTKDLICWNAMIKGYGLNGCGNKALNTFSDM 480

Query: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQGK 540
           LSYGLKPNG +F SLLSACAQCGLEKE  MWF SMID+Y ITPT AHYAC+V+LL R+GK
Sbjct: 481 LSYGLKPNGVVFASLLSACAQCGLEKEVRMWFRSMIDKYGITPTEAHYACIVDLLVRKGK 540

Query: 541 IREAVEFVKKMAVEPDTRIWGALFAGCKLTH 572
           I EAVEFVK M VEPDTRIWGAL  GCKLTH
Sbjct: 541 IGEAVEFVKXMPVEPDTRIWGALLLGCKLTH 571

BLAST of Carg24643 vs. TrEMBL
Match: tr|A0A0A0L489|A0A0A0L489_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122420 PE=4 SV=1)

HSP 1 Score: 903.3 bits (2333), Expect = 3.0e-259
Identity = 442/550 (80.36%), Postives = 494/550 (89.82%), Query Frame = 0

Query: 1   MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN 60
           MLCFSRCARNLFV S +RK+YTI S++D TS KK+ Y+EDPV F+A++EDVISWTSKITN
Sbjct: 1   MLCFSRCARNLFVVSSKRKDYTIRSMVDATSTKKRVYFEDPVEFYAQREDVISWTSKITN 60

Query: 61  LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
           LVRTGQP+SAFGFFKMMF+NGHRPN+VTMLSV+RAIDALSW+S IEVMHG VIKMGFESE
Sbjct: 61  LVRTGQPESAFGFFKMMFSNGHRPNYVTMLSVIRAIDALSWDSMIEVMHGVVIKMGFESE 120

Query: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQ 180
           VAVSTALLGFYS+RDI  VWKLF QIP KDVVLWSA+IS CVK+GQ++EAF L REMQ Q
Sbjct: 121 VAVSTALLGFYSIRDIETVWKLFNQIPSKDVVLWSAIISVCVKNGQYNEAFDLLREMQDQ 180

Query: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
           GV PN V+IVSILPACADFG LSLGKE+HAFSMRRDFYS+V++QNSLMDMYSKCR  EAS
Sbjct: 181 GVQPNQVTIVSILPACADFGVLSLGKELHAFSMRRDFYSMVDLQNSLMDMYSKCRKFEAS 240

Query: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
           IRVLK MRKKD VSW+ +THACIQNNCPSK FKIF+RMRSFGFEL ETMMLD I+AVLL+
Sbjct: 241 IRVLKLMRKKDAVSWKIITHACIQNNCPSKVFKIFSRMRSFGFELSETMMLDMISAVLLL 300

Query: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
           DEL+LGLAVHCYALKGGFLCFI VGTELLQMYAKFG+L LAKL FD LVDKDIIAWSAMI
Sbjct: 301 DELLLGLAVHCYALKGGFLCFILVGTELLQMYAKFGDLRLAKLVFDGLVDKDIIAWSAMI 360

Query: 361 SAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
           SAYSHGE+PL+AIQ+FK+MQSTNE+PN  TFVSL++ACSSL A+ELGE+I AH  K GY+
Sbjct: 361 SAYSHGEDPLNAIQTFKMMQSTNEKPNERTFVSLMDACSSLGAKELGETIQAHTIKCGYT 420

Query: 421 SNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480
           SNT LMSAL+ FYC L R+KLGEHVF EI  KD++CW+ +IKGYG NGCGN+ALNTFSDM
Sbjct: 421 SNTHLMSALVGFYCKLGRIKLGEHVFDEISRKDVICWNALIKGYGLNGCGNKALNTFSDM 480

Query: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQGK 540
           LSYGLKPNG +F SLLSACAQCGLEKE  MWF SM DEY ITPT+AHYAC+V+LL RQGK
Sbjct: 481 LSYGLKPNGVVFASLLSACAQCGLEKEVRMWFRSMNDEYGITPTMAHYACIVDLLVRQGK 540

Query: 541 IREAVEFVKK 551
           IREAVEFVKK
Sbjct: 541 IREAVEFVKK 550

BLAST of Carg24643 vs. TrEMBL
Match: tr|A0A2N9F7C2|A0A2N9F7C2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14708 PE=4 SV=1)

HSP 1 Score: 711.8 bits (1836), Expect = 1.3e-201
Identity = 346/569 (60.81%), Postives = 427/569 (75.04%), Query Frame = 0

Query: 36  AYYEDPVGFFAKQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRA 95
           AYYEDPV F+A++E+VISWTSKI+ LVR  QP+ A G FK M  N  RPN VT+LSV+RA
Sbjct: 20  AYYEDPVDFYAQRENVISWTSKISGLVRKNQPNEAVGLFKKMLENEERPNFVTVLSVIRA 79

Query: 96  IDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWS 155
           + AL  E+ I V+H  VIK+GFESEV+V TALLG YSM D+GIVWKLFY+IP KDVVLWS
Sbjct: 80  VGALDCEAMIRVVHALVIKIGFESEVSVLTALLGCYSMYDMGIVWKLFYRIPSKDVVLWS 139

Query: 156 AVISACVKHGQFSEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRR 215
           A++SACV++GQ+ EA   FR+MQ  GV PNHVSIVSILPACAD G LSLGKEIH FS++ 
Sbjct: 140 AMVSACVRNGQYFEALEFFRDMQCHGVQPNHVSIVSILPACADLGVLSLGKEIHGFSIKS 199

Query: 216 DFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIF 275
            FY + N+QNSL+ MY+KCRNLEASIRV K + KKD +SWRT+   CI+N CP KA  IF
Sbjct: 200 VFYCLRNVQNSLVVMYAKCRNLEASIRVFKVIWKKDTISWRTIIRGCIENECPKKALSIF 259

Query: 276 TRMRSFGFELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKF 335
            +MR   FE  ET++ D + A    +E   GLA HCY LKGGFL F+SVGT L+QMY+KF
Sbjct: 260 LKMRLSCFEPNETIIRDIVVASSQAEEHKFGLAFHCYILKGGFLAFVSVGTVLMQMYSKF 319

Query: 336 GELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLV 395
           GE   A+  FD+L   D+IAWS MIS Y+ G  P +A  + K MQS NE+PN ITFVSL+
Sbjct: 320 GEESSARTIFDQLNHIDLIAWSVMISVYAQGRNPHNAFDTLKQMQSMNEKPNEITFVSLL 379

Query: 396 NACSSLDAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLV 455
            ACSS+ +QELGESIHAH+ K+GYS N  L S L+D YC   R+K G+ +F EI TKDL+
Sbjct: 380 QACSSIGSQELGESIHAHVIKAGYSMNAYLQSTLIDLYCKFGRIKQGKALFDEIPTKDLI 439

Query: 456 CWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSM 515
           CWS+MIKGYG NGCG EAL T S+ML  G+KPN  +F+S+LSAC QCGLE EG  WF+SM
Sbjct: 440 CWSSMIKGYGMNGCGTEALKTLSNMLDCGVKPNDIVFISVLSACGQCGLEYEGRSWFHSM 499

Query: 516 IDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSD 575
             +Y ITP + HYACMV LL+R+GKI EA+EFV+KM V+PD RIWG L A C+ THG  +
Sbjct: 500 AAKYGITPKLPHYACMVGLLSRRGKIEEALEFVRKMPVKPDKRIWGTLLACCRSTHGSIE 559

Query: 576 IADSIVQQLNALEPNNSDFHAMLHNFCAE 605
           IA+ +++QL AL+P+N+  +  L +  AE
Sbjct: 560 IAEFVIEQLVALDPHNTSHYVFLSDLYAE 588

BLAST of Carg24643 vs. TrEMBL
Match: tr|A5C4V9|A5C4V9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_040403 PE=4 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 2.2e-193
Identity = 326/569 (57.29%), Postives = 424/569 (74.52%), Query Frame = 0

Query: 36  AYYEDPVGFFAKQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRA 95
           AYYE+PV F  ++++VISWTSKI++LV+  Q + A G FKMM     RPNHVT+LSV+RA
Sbjct: 39  AYYEEPVEFHGEKDNVISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRA 98

Query: 96  IDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWS 155
           I  L  E  + V+ G VIK+GFESEV+V+TAL+GFYS  D+GIVWK+F Q P KD+VLWS
Sbjct: 99  ISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDYDMGIVWKIFNQTPIKDLVLWS 158

Query: 156 AVISACVKHGQFSEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRR 215
           A++SACVK GQ+ EAF +FR MQY GV PNHVSIVSILPACA+ GAL  GKEIH FS+++
Sbjct: 159 AMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKK 218

Query: 216 DFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIF 275
            F+ + N+ NSL+DMY+KCRN +AS+ V   + +KD++SW T+   CI+N+CP +AFK F
Sbjct: 219 MFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAF 278

Query: 276 TRMRSFGFELGETMMLDFIAAVLLVDELVLGLAVHCYALKGGFLCFISVGTELLQMYAKF 335
           +RM+   F   ET++ D I A++  DE   G+A H + LK G L F+S+GT LLQMYAKF
Sbjct: 279 SRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKF 338

Query: 336 GELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLV 395
           GEL  A + FD+L  KD I+WSAMIS ++H   P +A+++FK MQST+ERPN ITFVSL+
Sbjct: 339 GELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLL 398

Query: 396 NACSSLDAQELGESIHAHITKSGYSSNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLV 455
            ACS + AQELGESI AH TK+GY SN  L SAL+D YC   R+  G  +F EI TKDLV
Sbjct: 399 QACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLV 458

Query: 456 CWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSM 515
           CWS+MI GYG NGCG+EAL TFS+ML+ G+KPN  +F+S+LSAC+ CGLE EGW  F SM
Sbjct: 459 CWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSM 518

Query: 516 IDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSD 575
             +Y I P + HYACMV+L++R+G I  A++FV KM +EPD RIWGAL AGC+ THG  +
Sbjct: 519 EQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIE 578

Query: 576 IADSIVQQLNALEPNNSDFHAMLHNFCAE 605
           IA+ + ++L  L+P N+ ++ +L N  AE
Sbjct: 579 IAELVAERLIGLDPQNTSYYVILSNLYAE 607

BLAST of Carg24643 vs. TrEMBL
Match: tr|A0A2R6Q8X4|A0A2R6Q8X4_ACTCH (Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc20204 PE=4 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 4.1e-184
Identity = 313/602 (51.99%), Postives = 431/602 (71.59%), Query Frame = 0

Query: 6   RCARNLFVKSPQRKNYTIGSV---IDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITNLV 65
           R    LF +  QR  +   SV      T  K  +Y+EDP+ FF + ++VISWTSKI++LV
Sbjct: 6   RNTHKLFEEITQRWAFMRNSVHYLSHSTLHKTHSYFEDPIEFFGENQNVISWTSKISSLV 65

Query: 66  RTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESEVA 125
           R  +P+ A G FK+M  NG  PN VT+LSV+RAI+ L +++  + +HG ++KMGFESEV+
Sbjct: 66  RRDKPEEAIGLFKIMLVNGQSPNFVTILSVIRAIENLGFDNLTQAIHGLLLKMGFESEVS 125

Query: 126 VSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQGV 185
           V T LLG YS+ D  + WKLF ++P +D+ LW+A++S CVK GQ+ +AF +FR M Y  V
Sbjct: 126 VVTCLLGAYSVGDDEVAWKLFDEMPNRDLFLWNAILSVCVKSGQYFKAFEIFRGMHYNCV 185

Query: 186 HPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEASIR 245
            PNHVSIVS+LPACA  G  + G++IH FS++   +++ N+QNSL+DMY+KC  LE SIR
Sbjct: 186 QPNHVSIVSMLPACAALGNSAFGRQIHGFSIKLVCHALTNVQNSLVDMYAKCGYLETSIR 245

Query: 246 VLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLVDE 305
           V  T+ KKD++SWRT+ H C++N CP  A  +F+RM+S  F   E ++LD I A    ++
Sbjct: 246 VFDTIEKKDLISWRTMIHGCVKNECPRTALHMFSRMKSCSFIPDEVIILDAIGASAEAEK 305

Query: 306 LVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMISA 365
           +  GL  H Y LK GF+ F+SV T LLQMY KFG    A + F+++  KD+IAWSAMISA
Sbjct: 306 VSFGLGFHGYTLKSGFINFVSVMTALLQMYVKFGIFESATIIFNQIQWKDLIAWSAMISA 365

Query: 366 YSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYSSN 425
           Y+    PL+A+ +FK MQSTNE PN +T VS++ ACSS+  Q+LGE+IHAH+TK GYSSN
Sbjct: 366 YAQSGHPLNALDTFKEMQSTNEEPNEVTLVSVLQACSSMGVQDLGENIHAHVTKVGYSSN 425

Query: 426 TRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDMLS 485
             L+SAL+DFYC   R++ G+ +F EI+ KDLVCWS+MI GYG NG G EAL TFS ML+
Sbjct: 426 AFLISALIDFYCKFGRIRQGKALFDEILVKDLVCWSSMINGYGINGRGVEALETFSKMLN 485

Query: 486 YGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQGKIR 545
            G+ PN  +F+SLLSAC+ CGLE EGW WFY+M + Y I+P +AHYACMV+LL+R+G + 
Sbjct: 486 CGVMPNEVVFISLLSACSHCGLENEGWNWFYAMEEIYGISPKLAHYACMVDLLSRRGNVE 545

Query: 546 EAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHNFC 605
           EA+EFV+ M ++PD RIWGAL AGC+ ++G  ++A+ +V+QL  L+P+N+  + +L N  
Sbjct: 546 EALEFVRSMPIKPDKRIWGALLAGCRSSYGSIEMAEFVVEQLIGLDPDNTSCYVVLSNLY 605

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023538701.10.0e+0097.35pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita ... [more]
XP_022974593.10.0e+0096.85pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita ... [more]
XP_022934182.10.0e+0097.27pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita ... [more]
XP_022147491.13.2e-30585.29pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X1 [Momo... [more]
XP_022147493.11.1e-28681.49pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X2 [Momo... [more]
Match NameE-valueIdentityDescription
AT1G11290.17.1e-8129.09Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G30700.13.0e-7929.28Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G13650.12.5e-7830.52Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G63370.12.8e-7729.19Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G53360.16.2e-7729.80Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q3E6Q1|PPR32_ARATH1.3e-7929.09Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
sp|Q9SUH6|PP341_ARATH5.3e-7829.28Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... [more]
sp|Q9SVP7|PP307_ARATH4.5e-7730.52Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... [more]
sp|Q9M1V3|PP296_ARATH5.0e-7629.19Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... [more]
sp|Q9LFI1|PP280_ARATH1.1e-7529.80Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
tr|A0A1S4DSI8|A0A1S4DSI8_CUCME4.2e-26980.39LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56... [more]
tr|A0A0A0L489|A0A0A0L489_CUCSA3.0e-25980.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122420 PE=4 SV=1[more]
tr|A0A2N9F7C2|A0A2N9F7C2_FAGSY1.3e-20160.81Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14708 PE=4 SV=1[more]
tr|A5C4V9|A5C4V9_VITVI2.2e-19357.29Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_040403 PE=4 SV=1[more]
tr|A0A2R6Q8X4|A0A2R6Q8X4_ACTCH4.1e-18451.99Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensi... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24643-RACarg24643-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 149..197
e-value: 2.8E-11
score: 43.3
coord: 452..500
e-value: 1.3E-7
score: 31.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 253..283
e-value: 0.0016
score: 18.4
coord: 225..251
e-value: 0.038
score: 14.2
coord: 355..381
e-value: 0.2
score: 11.9
coord: 53..81
e-value: 0.27
score: 11.5
coord: 528..551
e-value: 0.18
score: 12.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 152..185
e-value: 6.9E-8
score: 30.2
coord: 455..488
e-value: 5.2E-7
score: 27.5
coord: 253..285
e-value: 4.4E-4
score: 18.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 524..554
score: 7.563
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 352..386
score: 8.835
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 453..487
score: 11.224
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 251..285
score: 9.591
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 387..421
score: 6.752
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 150..184
score: 12.934
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 220..250
score: 6.873
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 488..523
score: 7.136
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 422..452
score: 5.755
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 50..84
score: 10.052
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 46..100
e-value: 3.9E-6
score: 28.3
coord: 113..218
e-value: 1.5E-14
score: 55.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 219..355
e-value: 1.3E-12
score: 49.8
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 389..601
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 23..200
coord: 202..399
NoneNo IPR availablePANTHERPTHR24015:SF75SUBFAMILY NOT NAMEDcoord: 106..280
NoneNo IPR availablePANTHERPTHR24015:SF75SUBFAMILY NOT NAMEDcoord: 23..200
coord: 202..399
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 106..280
NoneNo IPR availablePANTHERPTHR24015:SF75SUBFAMILY NOT NAMEDcoord: 389..601