BLAST of Cp4.1LG08g01180 vs. Swiss-Prot
Match:
PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)
HSP 1 Score: 322.4 bits (825), Expect = 1.1e-86
Identity = 181/561 (32.26%), Postives = 298/561 (53.12%), Query Frame = 1
Query: 49 EDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRAIDALSWESTIEVM 108
E + W + L ++G + G FK M ++G + T V ++ +L E +
Sbjct: 158 EKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQL 217
Query: 109 HGGVIKMGFESEVAVSTALLGFYSMRD-IGIVWKLFYQIPYKDVVLWSAVISACVKHGQF 168
HG ++K GF +V +L+ FY + K+F ++ +DV+ W+++I+ V +G
Sbjct: 218 HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 277
Query: 169 IEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSL 228
+ +F +M G+ + +IVS+ CAD +SLG+ +H+ ++ F N+L
Sbjct: 278 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 337
Query: 229 MDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFE--- 288
+DMYSKC +L+++ V + M + +VS+ ++ + +A K+F M G
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397
Query: 289 LGETMMLDFIAAVLLVDELLLGLAVHCHALKGGFLCFISVGTELLQMYAKFGELGLAKLT 348
T +L+ A L+DE G VH + I V L+ MYAK G + A+L
Sbjct: 398 YTVTAVLNCCARYRLLDE---GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 457
Query: 349 FDELVDKDIIAWSAMISAYSHGEEPLSAIQTFKMM-QSTNERPNAITFVSLVNACSSLDA 408
F E+ KDII+W+ +I YS A+ F ++ + P+ T ++ AC+SL A
Sbjct: 458 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 517
Query: 409 QELGESIHAHITKSGYSSNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIKG 468
+ G IH +I ++GY S+ + ++LVD Y + L +FD+I +KDLV W+ MI G
Sbjct: 518 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 577
Query: 469 YGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAMIDEYNITP 528
YG +G G EA+ F+ M G++ + FVSLL AC+ GL EGW +FN M E I P
Sbjct: 578 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 637
Query: 529 TVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQ 588
TV HYAC+V++LAR G + +A F++ M + PD IWGAL GC++ H +A+ + ++
Sbjct: 638 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVK-LAEKVAEK 697
Query: 589 LNALEPNNSDFHAMLHNFCIE 605
+ LEP N+ ++ ++ N E
Sbjct: 698 VFELEPENTGYYVLMANIYAE 714
BLAST of Cp4.1LG08g01180 vs. Swiss-Prot
Match:
PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1)
HSP 1 Score: 303.1 bits (775), Expect = 6.6e-81
Identity = 167/567 (29.45%), Postives = 295/567 (52.03%), Query Frame = 1
Query: 37 YYEDPVGFFAQQEDVISWTSKITNLVRTGQPDSAFGFFK-MMFANGHRPNYVTMLSVLRA 96
YY + Q+ DV + + P S+ F + + +PN T + A
Sbjct: 69 YYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISA 128
Query: 97 IDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFY-SMRDIGIVWKLFYQIPYKDVVLW 156
+ V+HG + G +SE+ + + ++ Y + K+F ++P KD +LW
Sbjct: 129 ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188
Query: 157 SAVISACVKHGQFIEAFHLFREMQYQG-VHPNHVSIVSILPACADFGALSLGKEIHAFSM 216
+ +IS K+ ++E+ +FR++ + + +++ ILPA A+ L LG +IH+ +
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLAT 248
Query: 217 RRDFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFK 276
+ YS + + +YSKC ++ + + RK D+V++ + H N +
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLS 308
Query: 277 IFTRMRSFGFELGETMMLDFIAAVLLVDELLLGLAVHCHALKGGFLCFISVGTELLQMYA 336
+F + G L + + ++ V + L+L A+H + LK FL SV T L +Y+
Sbjct: 309 LFKELMLSGARLRSSTL---VSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYS 368
Query: 337 KFGELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQTFKMMQSTNERPNAITFVS 396
K E+ A+ FDE +K + +W+AMIS Y+ AI F+ MQ + PN +T
Sbjct: 369 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITC 428
Query: 397 LVNACSSLDAQELGESIHAHITKSGYSSNTCLMSALVDFYCILRRVKLGEHVFDEIVTKD 456
+++AC+ L A LG+ +H + + + S+ + +AL+ Y + +FD + K+
Sbjct: 429 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 488
Query: 457 LVCWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFN 516
V W+TMI GYG +G G EALN F +ML+ G+ P F+ +L AC+ GL KEG FN
Sbjct: 489 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 548
Query: 517 AMIDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGF 576
+MI Y P+V HYACMV++L R G ++ A++F++ M++EP + +W L C++ H
Sbjct: 549 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI-HKD 608
Query: 577 SDIADSIVQQLNALEPNNSDFHAMLHN 601
+++A ++ ++L L+P+N +H +L N
Sbjct: 609 TNLARTVSEKLFELDPDNVGYHVLLSN 631
BLAST of Cp4.1LG08g01180 vs. Swiss-Prot
Match:
PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 302.0 bits (772), Expect = 1.5e-80
Identity = 161/550 (29.27%), Postives = 294/550 (53.45%), Query Frame = 1
Query: 52 ISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRAIDALSWESTIEVMHGG 111
+ + + + + D A FF M + P +L+ + + +HG
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 112 VIKMGFESEVAVSTALLGFYSM-RDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFIEA 171
++K GF ++ T L Y+ R + K+F ++P +D+V W+ +++ ++G A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 172 FHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDM 231
+ + M + + P+ ++IVS+LPA + +S+GKEIH ++MR F S+VNI +L+DM
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 232 YSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMM 291
Y+KC +LE + ++ M ++++VSW ++ A +QN P +A IF +M G + + +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 292 LDFIAAVLLVDELLLGLAVHCHALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVD 351
+ + A + +L G +H +++ G +SV L+ MY K E+ A F +L
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 352 KDIIAWSAMISAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLVNACSSLDAQELGESI 411
+ +++W+AMI ++ P+ A+ F M+S +P+ T+VS++ A + L + I
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 412 HAHITKSGYSSNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIKGYGTNGCG 471
H + +S N + +ALVD Y + + +FD + + + W+ MI GYGT+G G
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 472 NEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAMIDEYNITPTVAHYAC 531
AL F +M +KPNG F+S++SAC+ GL + G F M + Y+I ++ HY
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 532 MVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPN 591
MV+LL R G++ EA +F+ +M V+P ++GA+ C++ H + A+ ++L L P+
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI-HKNVNFAEKAAERLFELNPD 640
Query: 592 NSDFHAMLHN 601
+ +H +L N
Sbjct: 641 DGGYHVLLAN 649
BLAST of Cp4.1LG08g01180 vs. Swiss-Prot
Match:
PP359_ARATH (Pentatricopeptide repeat-containing protein At4g39952, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2 SV=2)
HSP 1 Score: 300.8 bits (769), Expect = 3.3e-80
Identity = 172/556 (30.94%), Postives = 290/556 (52.16%), Query Frame = 1
Query: 50 DVISWTSKITNLVRTGQPDSAFGFFKMMFANGH---RPNYVTMLSVLRAIDALSWESTIE 109
DV++WT+ I+ V+ G+ + G+ M + G +PN T+ +A L
Sbjct: 191 DVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGR 250
Query: 110 VMHGGVIKMGFESEVAVSTALLGFYSMR-DIGIVWKLFYQIPYKDVVLWSAVISACVKHG 169
+HG +K G S V +++ FYS + + F ++ +D+ W+++I++ + G
Sbjct: 251 CLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSG 310
Query: 170 QFIEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQN 229
E+F +F EMQ +G+HP+ V I ++ + GK H F +R F + N
Sbjct: 311 DMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCN 370
Query: 230 SLMDMYSKCRNLEASIRVL-KTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFE 289
SL+ MY K L + ++ + + + +W T+ + C K ++F ++++ G E
Sbjct: 371 SLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIE 430
Query: 290 LGETMMLDFIAAVLLVDELLLGLAVHCHALKGGFLCFISVGTELLQMYAKFGELGLAKLT 349
+ I++ + +LLG ++HC+ +K ISV L+ +Y K G+L +A
Sbjct: 431 IDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRM 490
Query: 350 FDELVDKDIIAWSAMISAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLVNACSSLDAQ 409
F E D ++I W+AMI++Y H E+ AI F M S N +P++IT V+L+ AC + +
Sbjct: 491 FCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSL 550
Query: 410 ELGESIHAHITKSGYSSNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIKGY 469
E G+ IH +IT++ + N L +AL+D Y ++ +FD KD VCW+ MI GY
Sbjct: 551 ERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGY 610
Query: 470 GTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAMIDEYNITPT 529
G +G A+ F M +KP G F++LLSAC GL ++G F M +Y++ P
Sbjct: 611 GMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPN 670
Query: 530 VAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQL 589
+ HY+C+V+LL+R G + EA V M PD IWG L + C +THG ++ + ++
Sbjct: 671 LKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSC-MTHGEFEMGIRMAERA 730
Query: 590 NALEPNNSDFHAMLHN 601
A +P N ++ ML N
Sbjct: 731 VASDPQNDGYYIMLAN 743
BLAST of Cp4.1LG08g01180 vs. Swiss-Prot
Match:
PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2)
HSP 1 Score: 294.7 bits (753), Expect = 2.4e-78
Identity = 168/562 (29.89%), Postives = 285/562 (50.71%), Query Frame = 1
Query: 45 FAQQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRAIDALSWEST 104
F ++ D + W S +++ +G+ F+ M G PN T++S L A D S+
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 302
Query: 105 IEVMHGGVIKMG-FESEVAVSTALLGFYSM-RDIGIVWKLFYQIPYKDVVLWSAVISACV 164
+ +H V+K SE+ V AL+ Y+ + ++ Q+ DVV W+++I V
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362
Query: 165 KHGQFIEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVN 224
++ + EA F +M G + VS+ SI+ A L G E+HA+ ++ + S +
Sbjct: 363 QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ 422
Query: 225 IQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFG 284
+ N+L+DMYSKC R M KD++SW TV QN+C +A ++F +
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 482
Query: 285 FELGETMMLDFIAAVLLVDELLLGLAVHCHALKGGFLCFISVGTELLQMYAKFGELGLAK 344
E+ E ++ + A ++ +L+ +HCH L+ G L + + EL+ +Y K +G A
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYAT 542
Query: 345 LTFDELVDKDIIAWSAMISAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLVNACSSLD 404
F+ + KD+++W++MIS+ + A++ F+ M T +++ + +++A +SL
Sbjct: 543 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLS 602
Query: 405 AQELGESIHAHITKSGYSSNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIK 464
A G IH ++ + G+ + A+VD Y ++ + VFD I K L+ +++MI
Sbjct: 603 ALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMIN 662
Query: 465 GYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAMIDEYNIT 524
YG +GCG A+ F M + P+ F++LL AC+ GL EG + M EY +
Sbjct: 663 AYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELE 722
Query: 525 PTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQ 584
P HY C+V++L R + EA EFVK M EP +W AL A C+ +H +I + Q
Sbjct: 723 PWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACR-SHSEKEIGEIAAQ 782
Query: 585 QLNALEPNNSDFHAMLHNFCIE 605
+L LEP N ++ N E
Sbjct: 783 RLLELEPKNPGNLVLVSNVFAE 802
BLAST of Cp4.1LG08g01180 vs. TrEMBL
Match:
A0A0A0L489_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122420 PE=4 SV=1)
HSP 1 Score: 909.1 bits (2348), Expect = 2.9e-261
Identity = 446/550 (81.09%), Postives = 493/550 (89.64%), Query Frame = 1
Query: 1 MLCFSRCARYLFVKSPQRKNYTIGLVIDATSAKKQAYYEDPVGFFAQQEDVISWTSKITN 60
MLCFSRCAR LFV S +RK+YTI ++DATS KK+ Y+EDPV F+AQ+EDVISWTSKITN
Sbjct: 1 MLCFSRCARNLFVVSSKRKDYTIRSMVDATSTKKRVYFEDPVEFYAQREDVISWTSKITN 60
Query: 61 LVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
LVRTGQP+SAFGFFKMMF+NGHRPNYVTMLSV+RAIDALSW+S IEVMHG VIKMGFESE
Sbjct: 61 LVRTGQPESAFGFFKMMFSNGHRPNYVTMLSVIRAIDALSWDSMIEVMHGVVIKMGFESE 120
Query: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFIEAFHLFREMQYQ 180
VAVSTALLGFYS+RDI VWKLF QIP KDVVLWSA+IS CVK+GQ+ EAF L REMQ Q
Sbjct: 121 VAVSTALLGFYSIRDIETVWKLFNQIPSKDVVLWSAIISVCVKNGQYNEAFDLLREMQDQ 180
Query: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
GV PN V+IVSILPACADFG LSLGKE+HAFSMRRDFYS+V++QNSLMDMYSKCR EAS
Sbjct: 181 GVQPNQVTIVSILPACADFGVLSLGKELHAFSMRRDFYSMVDLQNSLMDMYSKCRKFEAS 240
Query: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
IRVLK MRKKD VSW+ +THACIQNNCPSK FKIF+RMRSFGFEL ETMMLD I+AVLL+
Sbjct: 241 IRVLKLMRKKDAVSWKIITHACIQNNCPSKVFKIFSRMRSFGFELSETMMLDMISAVLLL 300
Query: 301 DELLLGLAVHCHALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
DELLLGLAVHC+ALKGGFLCFI VGTELLQMYAKFG+L LAKL FD LVDKDIIAWSAMI
Sbjct: 301 DELLLGLAVHCYALKGGFLCFILVGTELLQMYAKFGDLRLAKLVFDGLVDKDIIAWSAMI 360
Query: 361 SAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
SAYSHGE+PL+AIQTFKMMQSTNE+PN TFVSL++ACSSL A+ELGE+I AH K GY+
Sbjct: 361 SAYSHGEDPLNAIQTFKMMQSTNEKPNERTFVSLMDACSSLGAKELGETIQAHTIKCGYT 420
Query: 421 SNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480
SNT LMSALV FYC L R+KLGEHVFDEI KD++CW+ +IKGYG NGCGN+ALNTFSDM
Sbjct: 421 SNTHLMSALVGFYCKLGRIKLGEHVFDEISRKDVICWNALIKGYGLNGCGNKALNTFSDM 480
Query: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAMIDEYNITPTVAHYACMVELLARQGK 540
LSYGLKPNG +F SLLSACAQCGLEKE MWF +M DEY ITPT+AHYAC+V+LL RQGK
Sbjct: 481 LSYGLKPNGVVFASLLSACAQCGLEKEVRMWFRSMNDEYGITPTMAHYACIVDLLVRQGK 540
Query: 541 IREAVEFVKK 551
IREAVEFVKK
Sbjct: 541 IREAVEFVKK 550
BLAST of Cp4.1LG08g01180 vs. TrEMBL
Match:
A5C4V9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040403 PE=4 SV=1)
HSP 1 Score: 683.7 bits (1763), Expect = 2.0e-193
Identity = 324/569 (56.94%), Postives = 424/569 (74.52%), Query Frame = 1
Query: 36 AYYEDPVGFFAQQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRA 95
AYYE+PV F ++++VISWTSKI++LV+ Q + A G FKMM RPN+VT+LSV+RA
Sbjct: 39 AYYEEPVEFHGEKDNVISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRA 98
Query: 96 IDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWS 155
I L E + V+ G VIK+GFESEV+V+TAL+GFYS D+GIVWK+F Q P KD+VLWS
Sbjct: 99 ISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDYDMGIVWKIFNQTPIKDLVLWS 158
Query: 156 AVISACVKHGQFIEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRR 215
A++SACVK GQ+ EAF +FR MQY GV PNHVSIVSILPACA+ GAL GKEIH FS+++
Sbjct: 159 AMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKK 218
Query: 216 DFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIF 275
F+ + N+ NSL+DMY+KCRN +AS+ V + +KD++SW T+ CI+N+CP +AFK F
Sbjct: 219 MFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAF 278
Query: 276 TRMRSFGFELGETMMLDFIAAVLLVDELLLGLAVHCHALKGGFLCFISVGTELLQMYAKF 335
+RM+ F ET++ D I A++ DE G+A H LK G L F+S+GT LLQMYAKF
Sbjct: 279 SRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKF 338
Query: 336 GELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLV 395
GEL A + FD+L KD I+WSAMIS ++H P +A++TFK MQST+ERPN ITFVSL+
Sbjct: 339 GELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLL 398
Query: 396 NACSSLDAQELGESIHAHITKSGYSSNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLV 455
ACS + AQELGESI AH TK+GY SN L SAL+D YC R+ G +F+EI TKDLV
Sbjct: 399 QACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLV 458
Query: 456 CWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAM 515
CWS+MI GYG NGCG+EAL TFS+ML+ G+KPN +F+S+LSAC+ CGLE EGW F++M
Sbjct: 459 CWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSM 518
Query: 516 IDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSD 575
+Y I P + HYACMV+L++R+G I A++FV KM +EPD RIWGAL AGC+ THG +
Sbjct: 519 EQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIE 578
Query: 576 IADSIVQQLNALEPNNSDFHAMLHNFCIE 605
IA+ + ++L L+P N+ ++ +L N E
Sbjct: 579 IAELVAERLIGLDPQNTSYYVILSNLYAE 607
BLAST of Cp4.1LG08g01180 vs. TrEMBL
Match:
A0A061DV61_THECC (Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_005333 PE=4 SV=1)
HSP 1 Score: 613.6 bits (1581), Expect = 2.6e-172
Identity = 305/589 (51.78%), Postives = 411/589 (69.78%), Query Frame = 1
Query: 15 SPQRKNYTIGLVIDATSAKKQAYYEDPVGFFAQQEDVISWTSKITNLVRTGQPDSAFGFF 74
SP R ++ L +T + ++DPV +A ++ VISWTS ++ LVR GQP+ A G F
Sbjct: 668 SPTR--ISVALSRYSTLCYRNPNHDDPVDPYADKDHVISWTSVLSKLVRQGQPEEAIGLF 727
Query: 75 KMMFANGHRPNYVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFYSMR 134
K M + RPNYVT+LS+++A D L WE+ ++HG VIKMGFESE +V TAL+G YS+
Sbjct: 728 KTMLMSNQRPNYVTILSLVKAFDTLDWEALRMMVHGLVIKMGFESEPSVLTALIGSYSVY 787
Query: 135 DIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFIEAFHLFREMQYQGVHPNHVSIVSILP 194
+G+ W LF QIP KDVVL SA++SACVK+G ++EA LFR MQ G+ NHVSIVSILP
Sbjct: 788 GMGVCWSLFNQIPNKDVVLRSAMVSACVKNGDYVEALELFRRMQVLGLKANHVSIVSILP 847
Query: 195 ACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVS 254
ACA+ GAL LG+EIH F +RR + +QNSL+DMY+KCR+L+ +I V M KKD+VS
Sbjct: 848 ACANLGALQLGREIHGFIIRRMICYVNTVQNSLVDMYAKCRSLQTAICVFNGMLKKDLVS 907
Query: 255 WRTVTHACIQNNCPSKAFKIFTRMRSFG-FELGETMMLDFIAAVLLVDELLLGLAVHCHA 314
WRT+ ++N C KA F++M+ F L E ++ D I AVL E +G A HC+
Sbjct: 908 WRTLIRGYVENECGIKALDAFSKMQRLSFFALDEFVVRDMIMAVLQSGESKIGSAFHCYI 967
Query: 315 LKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAI 374
LK GFL F+S+ T LLQMYAKF + A+ FD + +KD+IAW+AMISAY+ P +AI
Sbjct: 968 LKTGFLAFVSIATALLQMYAKFSMVASARNVFDHISNKDVIAWNAMISAYAQTGLPFNAI 1027
Query: 375 QTFKMMQSTNERPNAITFVSLVNACSSLDAQE----LGESIHAHITKSGYSSNTCLMSAL 434
TF+ M NE+P+ + VSL+ CS + +QE +GE+IHA + K GYS N L SAL
Sbjct: 1028 NTFRQMLLMNEKPSEFSLVSLLQICSLMASQEVSDKVGETIHAFVAKVGYSRNVYLSSAL 1087
Query: 435 VDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNG 494
+DFYC RVK G+ +FDE+ TKDL+CWS+MI GY NG G EAL TF++ML G+KPN
Sbjct: 1088 IDFYCRFGRVKQGKALFDEVPTKDLICWSSMINGYVLNGYGIEALETFANMLDCGIKPND 1147
Query: 495 TLFVSLLSACAQCGLEKEGWMWFNAMIDEYNITPTVAHYACMVELLARQGKIREAVEFVK 554
+F+S+LSAC+ CGL+ EGW WF +M ++Y ITP +AHYACMV+LL+RQG I +A+ FVK
Sbjct: 1148 IIFLSVLSACSHCGLKNEGWNWFYSMKEKYGITPKLAHYACMVDLLSRQGHIEQALHFVK 1207
Query: 555 KMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAML 599
KM +EPD RIWGAL AGC+++ G I + +V++L+ L+P NS + M+
Sbjct: 1208 KMPMEPDKRIWGALLAGCRVSPGPIKIVEFVVERLSTLDPQNSTHYYMI 1254
BLAST of Cp4.1LG08g01180 vs. TrEMBL
Match:
A0A0D2RE34_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G121600 PE=4 SV=1)
HSP 1 Score: 610.9 bits (1574), Expect = 1.7e-171
Identity = 312/600 (52.00%), Postives = 418/600 (69.67%), Query Frame = 1
Query: 1 MLCFSRCARYLFVKSPQRKNYTIGLVIDATSAKKQAYYEDPVGFFAQQEDV-ISWTSKIT 60
M SR AR LF + QR + I AT + + ++D V A+ + V +SWTSK++
Sbjct: 1 MFSQSRNARKLFAEITQRIKSS-PTRISATLFHRNSSHDDTVEPNAENDHVLVSWTSKLS 60
Query: 61 NLVRTGQPDSAFGFFKMMFA--NGHRPNYVTMLSVLRAIDALSWESTIEVMHGGVIKMGF 120
LV+ GQP+ A FK M + RPNYVT+LS+++A+DAL W+ + ++HG V+KMGF
Sbjct: 61 KLVKQGQPEEAICLFKRMLLLKSNQRPNYVTILSLIKALDALHWDVLVMMVHGLVVKMGF 120
Query: 121 ESEVAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFIEAFHLFREM 180
SE +V TAL+G YS+ +G W LF+QI KDVVLWSAV+ ACVK+ ++EA LFR M
Sbjct: 121 ISEPSVLTALIGSYSVYGMGTCWSLFHQIRDKDVVLWSAVVYACVKNKDYLEALELFRRM 180
Query: 181 QYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNL 240
Q+ G+ NHVSIVSILPACA+ GAL LG+EIH F ++R F ++++QNSL+DMY+KCRNL
Sbjct: 181 QFIGLKVNHVSIVSILPACANLGALRLGREIHGFIIKRMFSHVISVQNSLVDMYAKCRNL 240
Query: 241 EASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFEL-GETMMLDFIAA 300
E+ IRV M +KD+VSWRTV I+N +A IF++M+ F E ++ D I A
Sbjct: 241 ESGIRVFDGMLEKDLVSWRTVIRGYIENEFGIEAINIFSKMQLLSFFAPDEFVVRDMIMA 300
Query: 301 VLLVDELLLGLAVHCHALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAW 360
VL E LG A HC+ +K GFL F+SV T LLQMYAKFG + A+ FD + +KD+IAW
Sbjct: 301 VLQSGENKLGSAFHCYIMKNGFLAFVSVATALLQMYAKFGMVCSARSVFDHIGNKDVIAW 360
Query: 361 SAMISAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLVNACSSLDAQE----LGESIHA 420
+AMISAY+ + P +A+ TF M N +PN + +SL+ CS + +QE LG+SIHA
Sbjct: 361 NAMISAYTQSKLPFNAVDTFTQMLHMNAKPNEFSLISLLQMCSLMASQEVSHELGDSIHA 420
Query: 421 HITKSGYSSNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIKGYGTNGCGNE 480
I K GYS N L SAL+DFYC RVK G+ +FDE+ KDL+CWS++I GYG NG G E
Sbjct: 421 FIEKVGYSRNVYLSSALIDFYCRSGRVKQGKALFDEVPVKDLICWSSLINGYGLNGYGIE 480
Query: 481 ALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAMIDEYNITPTVAHYACMV 540
AL TFS+ML G+KPN +F+S+LSAC+ CGLE EGW WF +M ++YN+TP +AHYACMV
Sbjct: 481 ALETFSNMLDCGIKPNEIIFLSVLSACSHCGLEYEGWNWFYSMKEKYNVTPKLAHYACMV 540
Query: 541 ELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNS 593
+LL+RQG I +A++FVKKM +EPD RIWGA+ AGC+LT G +I + +V+QL L+P NS
Sbjct: 541 DLLSRQGNIEQALDFVKKMPMEPDKRIWGAILAGCRLTPGPIEIVEFVVEQLATLDPQNS 599
BLAST of Cp4.1LG08g01180 vs. TrEMBL
Match:
A0A0J8D8C3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g004700 PE=4 SV=1)
HSP 1 Score: 594.7 bits (1532), Expect = 1.2e-166
Identity = 283/569 (49.74%), Postives = 392/569 (68.89%), Query Frame = 1
Query: 36 AYYEDPVGFFAQQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRA 95
++ +DP+ + + ++V+ WTS I+ LV+ +P A FK+M + RPNYVT+++VLR+
Sbjct: 45 SFLKDPIENYGEYKEVVYWTSIISGLVKQNRPKDAIAKFKLMLLSEQRPNYVTLVTVLRS 104
Query: 96 IDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWS 155
I AL +++ V+HG +IKMGF SE+ V TAL+G Y + WKLF +P KD+V+WS
Sbjct: 105 ISALRFKTPAFVVHGLMIKMGFGSEIRVLTALIGVYGNMHLPFAWKLFSDMPMKDLVMWS 164
Query: 156 AVISACVKHGQFIEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRR 215
A++S CVK G+F+ A +FR M +G+ PN VSIV++LPACA +L+LGK++H F+++
Sbjct: 165 AMVSICVKSGEFMGAIEVFRNMICEGIVPNFVSIVNVLPACAKLDSLALGKQVHGFALKT 224
Query: 216 DFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIF 275
F+ ++ IQNSL+DMY+KC + RV + +KD+V+W+T+ CI+ P KA IF
Sbjct: 225 SFHYVIYIQNSLIDMYAKCGGFMYAARVFARVARKDVVTWKTMIRGCIETGNPGKALVIF 284
Query: 276 TRMRSFGFELGETMMLDFIAAVLLVDELLLGLAVHCHALKGGFLCFISVGTELLQMYAKF 335
M E+ ++ D I +E GL +HC++LK G +SVGT LLQMYAKF
Sbjct: 285 AGMHQSCSEIDCGIICDVIGVTSDSEEFTFGLGLHCYSLKSGLAESVSVGTALLQMYAKF 344
Query: 336 GELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLV 395
GE+ ++L FD+L KD+IAW+AMISAY+ A+ TFK MQ T+E+PN ITFVSL+
Sbjct: 345 GEVHPSQLLFDQLHPKDLIAWTAMISAYAQSGYTSEALDTFKHMQLTSEKPNEITFVSLL 404
Query: 396 NACSSLDAQELGESIHAHITKSGYSSNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLV 455
ACSS QE GESIH ++TK+GY N+ L+SAL+D YC R+K G +FDE KDL+
Sbjct: 405 QACSSSGTQEFGESIHGYVTKAGYLPNSFLISALIDLYCKFGRIKQGRALFDEHHIKDLI 464
Query: 456 CWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAM 515
WS+MI GYG NG NEAL FS+ML+ G+KPN +FVS+LS+C+ CGLE EGW WFN M
Sbjct: 465 IWSSMINGYGLNGFANEALEIFSNMLASGVKPNDVIFVSVLSSCSHCGLEDEGWYWFNCM 524
Query: 516 IDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSD 575
D+Y I P +AHYACMV+LL+RQG + EAV+FV M VEPD RIWG+L AGCK THG D
Sbjct: 525 QDKYGIVPKIAHYACMVDLLSRQGNVEEAVDFVYNMQVEPDKRIWGSLLAGCKSTHGSID 584
Query: 576 IADSIVQQLNALEPNNSDFHAMLHNFCIE 605
+A+ +VQQL L+P N+ ++ +L N E
Sbjct: 585 VAELVVQQLIRLDPKNTSYYVVLSNMYAE 613
BLAST of Cp4.1LG08g01180 vs. TAIR10
Match:
AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 322.4 bits (825), Expect = 6.0e-88
Identity = 181/561 (32.26%), Postives = 298/561 (53.12%), Query Frame = 1
Query: 49 EDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRAIDALSWESTIEVM 108
E + W + L ++G + G FK M ++G + T V ++ +L E +
Sbjct: 158 EKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQL 217
Query: 109 HGGVIKMGFESEVAVSTALLGFYSMRD-IGIVWKLFYQIPYKDVVLWSAVISACVKHGQF 168
HG ++K GF +V +L+ FY + K+F ++ +DV+ W+++I+ V +G
Sbjct: 218 HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 277
Query: 169 IEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSL 228
+ +F +M G+ + +IVS+ CAD +SLG+ +H+ ++ F N+L
Sbjct: 278 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 337
Query: 229 MDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFE--- 288
+DMYSKC +L+++ V + M + +VS+ ++ + +A K+F M G
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397
Query: 289 LGETMMLDFIAAVLLVDELLLGLAVHCHALKGGFLCFISVGTELLQMYAKFGELGLAKLT 348
T +L+ A L+DE G VH + I V L+ MYAK G + A+L
Sbjct: 398 YTVTAVLNCCARYRLLDE---GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 457
Query: 349 FDELVDKDIIAWSAMISAYSHGEEPLSAIQTFKMM-QSTNERPNAITFVSLVNACSSLDA 408
F E+ KDII+W+ +I YS A+ F ++ + P+ T ++ AC+SL A
Sbjct: 458 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 517
Query: 409 QELGESIHAHITKSGYSSNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIKG 468
+ G IH +I ++GY S+ + ++LVD Y + L +FD+I +KDLV W+ MI G
Sbjct: 518 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 577
Query: 469 YGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAMIDEYNITP 528
YG +G G EA+ F+ M G++ + FVSLL AC+ GL EGW +FN M E I P
Sbjct: 578 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 637
Query: 529 TVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQ 588
TV HYAC+V++LAR G + +A F++ M + PD IWGAL GC++ H +A+ + ++
Sbjct: 638 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVK-LAEKVAEK 697
Query: 589 LNALEPNNSDFHAMLHNFCIE 605
+ LEP N+ ++ ++ N E
Sbjct: 698 VFELEPENTGYYVLMANIYAE 714
BLAST of Cp4.1LG08g01180 vs. TAIR10
Match:
AT4G30700.1 (AT4G30700.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 303.1 bits (775), Expect = 3.7e-82
Identity = 167/567 (29.45%), Postives = 295/567 (52.03%), Query Frame = 1
Query: 37 YYEDPVGFFAQQEDVISWTSKITNLVRTGQPDSAFGFFK-MMFANGHRPNYVTMLSVLRA 96
YY + Q+ DV + + P S+ F + + +PN T + A
Sbjct: 69 YYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISA 128
Query: 97 IDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFY-SMRDIGIVWKLFYQIPYKDVVLW 156
+ V+HG + G +SE+ + + ++ Y + K+F ++P KD +LW
Sbjct: 129 ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188
Query: 157 SAVISACVKHGQFIEAFHLFREMQYQG-VHPNHVSIVSILPACADFGALSLGKEIHAFSM 216
+ +IS K+ ++E+ +FR++ + + +++ ILPA A+ L LG +IH+ +
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLAT 248
Query: 217 RRDFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFK 276
+ YS + + +YSKC ++ + + RK D+V++ + H N +
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLS 308
Query: 277 IFTRMRSFGFELGETMMLDFIAAVLLVDELLLGLAVHCHALKGGFLCFISVGTELLQMYA 336
+F + G L + + ++ V + L+L A+H + LK FL SV T L +Y+
Sbjct: 309 LFKELMLSGARLRSSTL---VSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYS 368
Query: 337 KFGELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQTFKMMQSTNERPNAITFVS 396
K E+ A+ FDE +K + +W+AMIS Y+ AI F+ MQ + PN +T
Sbjct: 369 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITC 428
Query: 397 LVNACSSLDAQELGESIHAHITKSGYSSNTCLMSALVDFYCILRRVKLGEHVFDEIVTKD 456
+++AC+ L A LG+ +H + + + S+ + +AL+ Y + +FD + K+
Sbjct: 429 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 488
Query: 457 LVCWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFN 516
V W+TMI GYG +G G EALN F +ML+ G+ P F+ +L AC+ GL KEG FN
Sbjct: 489 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 548
Query: 517 AMIDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGF 576
+MI Y P+V HYACMV++L R G ++ A++F++ M++EP + +W L C++ H
Sbjct: 549 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI-HKD 608
Query: 577 SDIADSIVQQLNALEPNNSDFHAMLHN 601
+++A ++ ++L L+P+N +H +L N
Sbjct: 609 TNLARTVSEKLFELDPDNVGYHVLLSN 631
BLAST of Cp4.1LG08g01180 vs. TAIR10
Match:
AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 302.0 bits (772), Expect = 8.3e-82
Identity = 161/550 (29.27%), Postives = 294/550 (53.45%), Query Frame = 1
Query: 52 ISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRAIDALSWESTIEVMHGG 111
+ + + + + D A FF M + P +L+ + + +HG
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 112 VIKMGFESEVAVSTALLGFYSM-RDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFIEA 171
++K GF ++ T L Y+ R + K+F ++P +D+V W+ +++ ++G A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 172 FHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDM 231
+ + M + + P+ ++IVS+LPA + +S+GKEIH ++MR F S+VNI +L+DM
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 232 YSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMM 291
Y+KC +LE + ++ M ++++VSW ++ A +QN P +A IF +M G + + +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 292 LDFIAAVLLVDELLLGLAVHCHALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVD 351
+ + A + +L G +H +++ G +SV L+ MY K E+ A F +L
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 352 KDIIAWSAMISAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLVNACSSLDAQELGESI 411
+ +++W+AMI ++ P+ A+ F M+S +P+ T+VS++ A + L + I
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 412 HAHITKSGYSSNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIKGYGTNGCG 471
H + +S N + +ALVD Y + + +FD + + + W+ MI GYGT+G G
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 472 NEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAMIDEYNITPTVAHYAC 531
AL F +M +KPNG F+S++SAC+ GL + G F M + Y+I ++ HY
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 532 MVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPN 591
MV+LL R G++ EA +F+ +M V+P ++GA+ C++ H + A+ ++L L P+
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI-HKNVNFAEKAAERLFELNPD 640
Query: 592 NSDFHAMLHN 601
+ +H +L N
Sbjct: 641 DGGYHVLLAN 649
BLAST of Cp4.1LG08g01180 vs. TAIR10
Match:
AT4G39952.1 (AT4G39952.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 300.8 bits (769), Expect = 1.9e-81
Identity = 172/556 (30.94%), Postives = 290/556 (52.16%), Query Frame = 1
Query: 50 DVISWTSKITNLVRTGQPDSAFGFFKMMFANGH---RPNYVTMLSVLRAIDALSWESTIE 109
DV++WT+ I+ V+ G+ + G+ M + G +PN T+ +A L
Sbjct: 191 DVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGR 250
Query: 110 VMHGGVIKMGFESEVAVSTALLGFYSMR-DIGIVWKLFYQIPYKDVVLWSAVISACVKHG 169
+HG +K G S V +++ FYS + + F ++ +D+ W+++I++ + G
Sbjct: 251 CLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSG 310
Query: 170 QFIEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQN 229
E+F +F EMQ +G+HP+ V I ++ + GK H F +R F + N
Sbjct: 311 DMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCN 370
Query: 230 SLMDMYSKCRNLEASIRVL-KTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFE 289
SL+ MY K L + ++ + + + +W T+ + C K ++F ++++ G E
Sbjct: 371 SLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIE 430
Query: 290 LGETMMLDFIAAVLLVDELLLGLAVHCHALKGGFLCFISVGTELLQMYAKFGELGLAKLT 349
+ I++ + +LLG ++HC+ +K ISV L+ +Y K G+L +A
Sbjct: 431 IDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRM 490
Query: 350 FDELVDKDIIAWSAMISAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLVNACSSLDAQ 409
F E D ++I W+AMI++Y H E+ AI F M S N +P++IT V+L+ AC + +
Sbjct: 491 FCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSL 550
Query: 410 ELGESIHAHITKSGYSSNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIKGY 469
E G+ IH +IT++ + N L +AL+D Y ++ +FD KD VCW+ MI GY
Sbjct: 551 ERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGY 610
Query: 470 GTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAMIDEYNITPT 529
G +G A+ F M +KP G F++LLSAC GL ++G F M +Y++ P
Sbjct: 611 GMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPN 670
Query: 530 VAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQL 589
+ HY+C+V+LL+R G + EA V M PD IWG L + C +THG ++ + ++
Sbjct: 671 LKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSC-MTHGEFEMGIRMAERA 730
Query: 590 NALEPNNSDFHAMLHN 601
A +P N ++ ML N
Sbjct: 731 VASDPQNDGYYIMLAN 743
BLAST of Cp4.1LG08g01180 vs. TAIR10
Match:
AT3G63370.1 (AT3G63370.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 294.7 bits (753), Expect = 1.3e-79
Identity = 168/562 (29.89%), Postives = 285/562 (50.71%), Query Frame = 1
Query: 45 FAQQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRAIDALSWEST 104
F ++ D + W S +++ +G+ F+ M G PN T++S L A D S+
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 302
Query: 105 IEVMHGGVIKMG-FESEVAVSTALLGFYSM-RDIGIVWKLFYQIPYKDVVLWSAVISACV 164
+ +H V+K SE+ V AL+ Y+ + ++ Q+ DVV W+++I V
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362
Query: 165 KHGQFIEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVN 224
++ + EA F +M G + VS+ SI+ A L G E+HA+ ++ + S +
Sbjct: 363 QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ 422
Query: 225 IQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFG 284
+ N+L+DMYSKC R M KD++SW TV QN+C +A ++F +
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 482
Query: 285 FELGETMMLDFIAAVLLVDELLLGLAVHCHALKGGFLCFISVGTELLQMYAKFGELGLAK 344
E+ E ++ + A ++ +L+ +HCH L+ G L + + EL+ +Y K +G A
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYAT 542
Query: 345 LTFDELVDKDIIAWSAMISAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLVNACSSLD 404
F+ + KD+++W++MIS+ + A++ F+ M T +++ + +++A +SL
Sbjct: 543 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLS 602
Query: 405 AQELGESIHAHITKSGYSSNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIK 464
A G IH ++ + G+ + A+VD Y ++ + VFD I K L+ +++MI
Sbjct: 603 ALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMIN 662
Query: 465 GYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAMIDEYNIT 524
YG +GCG A+ F M + P+ F++LL AC+ GL EG + M EY +
Sbjct: 663 AYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELE 722
Query: 525 PTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQ 584
P HY C+V++L R + EA EFVK M EP +W AL A C+ +H +I + Q
Sbjct: 723 PWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACR-SHSEKEIGEIAAQ 782
Query: 585 QLNALEPNNSDFHAMLHNFCIE 605
+L LEP N ++ N E
Sbjct: 783 RLLELEPKNPGNLVLVSNVFAE 802
BLAST of Cp4.1LG08g01180 vs. NCBI nr
Match:
gi|659077727|ref|XP_008439351.1| (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g01580 [Cucumis melo])
HSP 1 Score: 941.0 bits (2431), Expect = 1.0e-270
Identity = 462/571 (80.91%), Postives = 506/571 (88.62%), Query Frame = 1
Query: 1 MLCFSRCARYLFVKSPQRKNYTIGLVIDATSAKKQAYYEDPVGFFAQQEDVISWTSKITN 60
MLCFSRCAR LFV SP RKNYTI ++DATS KK+ Y+EDPV F+AQ+EDVISWTSKITN
Sbjct: 1 MLCFSRCARNLFVISPNRKNYTIRSMMDATSTKKRGYFEDPVEFYAQREDVISWTSKITN 60
Query: 61 LVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
LVR GQP+SAFGFFKMMF+NGHRPNYVTMLSV+RAIDALSW+S IEVMHG IKMGFESE
Sbjct: 61 LVRAGQPESAFGFFKMMFSNGHRPNYVTMLSVIRAIDALSWDSMIEVMHGVTIKMGFESE 120
Query: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFIEAFHLFREMQYQ 180
VAVSTALLGFYS+RDI VWKLF QIP KDVV WSA+ISACVK+GQ+ EAF L REMQ Q
Sbjct: 121 VAVSTALLGFYSIRDIETVWKLFNQIPCKDVVFWSAIISACVKNGQYSEAFDLLREMQDQ 180
Query: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
GV PN VSIVSILPACADFG LSLGKE+HAFSMR+DFYS+V+IQNSLMDMYSKCR EAS
Sbjct: 181 GVQPNQVSIVSILPACADFGVLSLGKELHAFSMRKDFYSMVDIQNSLMDMYSKCRMFEAS 240
Query: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
I+VLK MRKKD VSW+ +THACIQNN PS+ FKIF+RMRS GFEL ETM+LD I+AVLLV
Sbjct: 241 IKVLKLMRKKDAVSWKIITHACIQNNYPSEVFKIFSRMRSLGFELSETMVLDMISAVLLV 300
Query: 301 DELLLGLAVHCHALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
DELLLGLAVHC+ALKGGFLCFI VGTELLQMYAKFG+L LAKL FDELVDKDIIAWSAMI
Sbjct: 301 DELLLGLAVHCYALKGGFLCFILVGTELLQMYAKFGDLRLAKLVFDELVDKDIIAWSAMI 360
Query: 361 SAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
S YSHGE+PL+AIQTFKMMQSTNE+PN TFVSL++ACSSL A+ELGESI AH K GY+
Sbjct: 361 SVYSHGEDPLNAIQTFKMMQSTNEKPNERTFVSLMDACSSLGAKELGESIQAHTIKCGYT 420
Query: 421 SNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480
SNT LMSALV FYC L R+KLGEHVFDEI TKDL+CW+ MIKGYG NGCGN+ALNTFSDM
Sbjct: 421 SNTHLMSALVGFYCTLGRIKLGEHVFDEISTKDLICWNAMIKGYGLNGCGNKALNTFSDM 480
Query: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAMIDEYNITPTVAHYACMVELLARQGK 540
LSYGLKPNG +F SLLSACAQCGLEKE MWF +MID+Y ITPT AHYAC+V+LL R+GK
Sbjct: 481 LSYGLKPNGVVFASLLSACAQCGLEKEVRMWFRSMIDKYGITPTEAHYACIVDLLVRKGK 540
Query: 541 IREAVEFVKKMAVEPDTRIWGALFAGCKLTH 572
I EAVEFVK M VEPDTRIWGAL GCKLTH
Sbjct: 541 IGEAVEFVKXMPVEPDTRIWGALLLGCKLTH 571
BLAST of Cp4.1LG08g01180 vs. NCBI nr
Match:
gi|700201385|gb|KGN56518.1| (hypothetical protein Csa_3G122420 [Cucumis sativus])
HSP 1 Score: 909.1 bits (2348), Expect = 4.2e-261
Identity = 446/550 (81.09%), Postives = 493/550 (89.64%), Query Frame = 1
Query: 1 MLCFSRCARYLFVKSPQRKNYTIGLVIDATSAKKQAYYEDPVGFFAQQEDVISWTSKITN 60
MLCFSRCAR LFV S +RK+YTI ++DATS KK+ Y+EDPV F+AQ+EDVISWTSKITN
Sbjct: 1 MLCFSRCARNLFVVSSKRKDYTIRSMVDATSTKKRVYFEDPVEFYAQREDVISWTSKITN 60
Query: 61 LVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
LVRTGQP+SAFGFFKMMF+NGHRPNYVTMLSV+RAIDALSW+S IEVMHG VIKMGFESE
Sbjct: 61 LVRTGQPESAFGFFKMMFSNGHRPNYVTMLSVIRAIDALSWDSMIEVMHGVVIKMGFESE 120
Query: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFIEAFHLFREMQYQ 180
VAVSTALLGFYS+RDI VWKLF QIP KDVVLWSA+IS CVK+GQ+ EAF L REMQ Q
Sbjct: 121 VAVSTALLGFYSIRDIETVWKLFNQIPSKDVVLWSAIISVCVKNGQYNEAFDLLREMQDQ 180
Query: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
GV PN V+IVSILPACADFG LSLGKE+HAFSMRRDFYS+V++QNSLMDMYSKCR EAS
Sbjct: 181 GVQPNQVTIVSILPACADFGVLSLGKELHAFSMRRDFYSMVDLQNSLMDMYSKCRKFEAS 240
Query: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
IRVLK MRKKD VSW+ +THACIQNNCPSK FKIF+RMRSFGFEL ETMMLD I+AVLL+
Sbjct: 241 IRVLKLMRKKDAVSWKIITHACIQNNCPSKVFKIFSRMRSFGFELSETMMLDMISAVLLL 300
Query: 301 DELLLGLAVHCHALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
DELLLGLAVHC+ALKGGFLCFI VGTELLQMYAKFG+L LAKL FD LVDKDIIAWSAMI
Sbjct: 301 DELLLGLAVHCYALKGGFLCFILVGTELLQMYAKFGDLRLAKLVFDGLVDKDIIAWSAMI 360
Query: 361 SAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
SAYSHGE+PL+AIQTFKMMQSTNE+PN TFVSL++ACSSL A+ELGE+I AH K GY+
Sbjct: 361 SAYSHGEDPLNAIQTFKMMQSTNEKPNERTFVSLMDACSSLGAKELGETIQAHTIKCGYT 420
Query: 421 SNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480
SNT LMSALV FYC L R+KLGEHVFDEI KD++CW+ +IKGYG NGCGN+ALNTFSDM
Sbjct: 421 SNTHLMSALVGFYCKLGRIKLGEHVFDEISRKDVICWNALIKGYGLNGCGNKALNTFSDM 480
Query: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAMIDEYNITPTVAHYACMVELLARQGK 540
LSYGLKPNG +F SLLSACAQCGLEKE MWF +M DEY ITPT+AHYAC+V+LL RQGK
Sbjct: 481 LSYGLKPNGVVFASLLSACAQCGLEKEVRMWFRSMNDEYGITPTMAHYACIVDLLVRQGK 540
Query: 541 IREAVEFVKK 551
IREAVEFVKK
Sbjct: 541 IREAVEFVKK 550
BLAST of Cp4.1LG08g01180 vs. NCBI nr
Match:
gi|147834193|emb|CAN75306.1| (hypothetical protein VITISV_040403 [Vitis vinifera])
HSP 1 Score: 683.7 bits (1763), Expect = 2.9e-193
Identity = 324/569 (56.94%), Postives = 424/569 (74.52%), Query Frame = 1
Query: 36 AYYEDPVGFFAQQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRA 95
AYYE+PV F ++++VISWTSKI++LV+ Q + A G FKMM RPN+VT+LSV+RA
Sbjct: 39 AYYEEPVEFHGEKDNVISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRA 98
Query: 96 IDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWS 155
I L E + V+ G VIK+GFESEV+V+TAL+GFYS D+GIVWK+F Q P KD+VLWS
Sbjct: 99 ISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDYDMGIVWKIFNQTPIKDLVLWS 158
Query: 156 AVISACVKHGQFIEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRR 215
A++SACVK GQ+ EAF +FR MQY GV PNHVSIVSILPACA+ GAL GKEIH FS+++
Sbjct: 159 AMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKK 218
Query: 216 DFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIF 275
F+ + N+ NSL+DMY+KCRN +AS+ V + +KD++SW T+ CI+N+CP +AFK F
Sbjct: 219 MFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAF 278
Query: 276 TRMRSFGFELGETMMLDFIAAVLLVDELLLGLAVHCHALKGGFLCFISVGTELLQMYAKF 335
+RM+ F ET++ D I A++ DE G+A H LK G L F+S+GT LLQMYAKF
Sbjct: 279 SRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKF 338
Query: 336 GELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLV 395
GEL A + FD+L KD I+WSAMIS ++H P +A++TFK MQST+ERPN ITFVSL+
Sbjct: 339 GELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLL 398
Query: 396 NACSSLDAQELGESIHAHITKSGYSSNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLV 455
ACS + AQELGESI AH TK+GY SN L SAL+D YC R+ G +F+EI TKDLV
Sbjct: 399 QACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLV 458
Query: 456 CWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAM 515
CWS+MI GYG NGCG+EAL TFS+ML+ G+KPN +F+S+LSAC+ CGLE EGW F++M
Sbjct: 459 CWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSM 518
Query: 516 IDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSD 575
+Y I P + HYACMV+L++R+G I A++FV KM +EPD RIWGAL AGC+ THG +
Sbjct: 519 EQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIE 578
Query: 576 IADSIVQQLNALEPNNSDFHAMLHNFCIE 605
IA+ + ++L L+P N+ ++ +L N E
Sbjct: 579 IAELVAERLIGLDPQNTSYYVILSNLYAE 607
BLAST of Cp4.1LG08g01180 vs. NCBI nr
Match:
gi|731421553|ref|XP_010661790.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g01580 [Vitis vinifera])
HSP 1 Score: 683.7 bits (1763), Expect = 2.9e-193
Identity = 324/569 (56.94%), Postives = 424/569 (74.52%), Query Frame = 1
Query: 36 AYYEDPVGFFAQQEDVISWTSKITNLVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRA 95
AYYE+PV F ++++VISWTSKI++LV+ Q + A G FKMM RPN+VT+LSV+RA
Sbjct: 39 AYYEEPVEFHGEKDNVISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRA 98
Query: 96 IDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWS 155
I L E + V+ G VIK+GFESEV+V+TAL+GFYS D+GIVWK+F Q P KD+VLWS
Sbjct: 99 ISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDYDMGIVWKIFNQTPIKDLVLWS 158
Query: 156 AVISACVKHGQFIEAFHLFREMQYQGVHPNHVSIVSILPACADFGALSLGKEIHAFSMRR 215
A++SACVK GQ+ EAF +FR MQY GV PNHVSIVSILPACA+ GAL GKEIH FS+++
Sbjct: 159 AMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKK 218
Query: 216 DFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIF 275
F+ + N+ NSL+DMY+KCRN +AS+ V + +KD++SW T+ CI+N+CP +AFK F
Sbjct: 219 MFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAF 278
Query: 276 TRMRSFGFELGETMMLDFIAAVLLVDELLLGLAVHCHALKGGFLCFISVGTELLQMYAKF 335
+RM+ F ET++ D I A++ DE G+A H LK G L F+S+GT LLQMYAKF
Sbjct: 279 SRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKF 338
Query: 336 GELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLV 395
GEL A + FD+L KD I+WSAMIS ++H P +A++TFK MQST+ERPN ITFVSL+
Sbjct: 339 GELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLL 398
Query: 396 NACSSLDAQELGESIHAHITKSGYSSNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLV 455
ACS + AQELGESI AH TK+GY SN L SAL+D YC R+ G +F+EI TKDLV
Sbjct: 399 QACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLV 458
Query: 456 CWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAM 515
CWS+MI GYG NGCG+EAL TFS+ML+ G+KPN +F+S+LSAC+ CGLE EGW F++M
Sbjct: 459 CWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSM 518
Query: 516 IDEYNITPTVAHYACMVELLARQGKIREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSD 575
+Y I P + HYACMV+L++R+G I A++FV KM +EPD RIWGAL AGC+ THG +
Sbjct: 519 EQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIE 578
Query: 576 IADSIVQQLNALEPNNSDFHAMLHNFCIE 605
IA+ + ++L L+P N+ ++ +L N E
Sbjct: 579 IAELVAERLIGLDPQNTSYYVILSNLYAE 607
BLAST of Cp4.1LG08g01180 vs. NCBI nr
Match:
gi|590722123|ref|XP_007051809.1| (Basic helix-loop-helix DNA-binding superfamily protein [Theobroma cacao])
HSP 1 Score: 613.6 bits (1581), Expect = 3.7e-172
Identity = 305/589 (51.78%), Postives = 411/589 (69.78%), Query Frame = 1
Query: 15 SPQRKNYTIGLVIDATSAKKQAYYEDPVGFFAQQEDVISWTSKITNLVRTGQPDSAFGFF 74
SP R ++ L +T + ++DPV +A ++ VISWTS ++ LVR GQP+ A G F
Sbjct: 668 SPTR--ISVALSRYSTLCYRNPNHDDPVDPYADKDHVISWTSVLSKLVRQGQPEEAIGLF 727
Query: 75 KMMFANGHRPNYVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESEVAVSTALLGFYSMR 134
K M + RPNYVT+LS+++A D L WE+ ++HG VIKMGFESE +V TAL+G YS+
Sbjct: 728 KTMLMSNQRPNYVTILSLVKAFDTLDWEALRMMVHGLVIKMGFESEPSVLTALIGSYSVY 787
Query: 135 DIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFIEAFHLFREMQYQGVHPNHVSIVSILP 194
+G+ W LF QIP KDVVL SA++SACVK+G ++EA LFR MQ G+ NHVSIVSILP
Sbjct: 788 GMGVCWSLFNQIPNKDVVLRSAMVSACVKNGDYVEALELFRRMQVLGLKANHVSIVSILP 847
Query: 195 ACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEASIRVLKTMRKKDMVS 254
ACA+ GAL LG+EIH F +RR + +QNSL+DMY+KCR+L+ +I V M KKD+VS
Sbjct: 848 ACANLGALQLGREIHGFIIRRMICYVNTVQNSLVDMYAKCRSLQTAICVFNGMLKKDLVS 907
Query: 255 WRTVTHACIQNNCPSKAFKIFTRMRSFG-FELGETMMLDFIAAVLLVDELLLGLAVHCHA 314
WRT+ ++N C KA F++M+ F L E ++ D I AVL E +G A HC+
Sbjct: 908 WRTLIRGYVENECGIKALDAFSKMQRLSFFALDEFVVRDMIMAVLQSGESKIGSAFHCYI 967
Query: 315 LKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMISAYSHGEEPLSAI 374
LK GFL F+S+ T LLQMYAKF + A+ FD + +KD+IAW+AMISAY+ P +AI
Sbjct: 968 LKTGFLAFVSIATALLQMYAKFSMVASARNVFDHISNKDVIAWNAMISAYAQTGLPFNAI 1027
Query: 375 QTFKMMQSTNERPNAITFVSLVNACSSLDAQE----LGESIHAHITKSGYSSNTCLMSAL 434
TF+ M NE+P+ + VSL+ CS + +QE +GE+IHA + K GYS N L SAL
Sbjct: 1028 NTFRQMLLMNEKPSEFSLVSLLQICSLMASQEVSDKVGETIHAFVAKVGYSRNVYLSSAL 1087
Query: 435 VDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDMLSYGLKPNG 494
+DFYC RVK G+ +FDE+ TKDL+CWS+MI GY NG G EAL TF++ML G+KPN
Sbjct: 1088 IDFYCRFGRVKQGKALFDEVPTKDLICWSSMINGYVLNGYGIEALETFANMLDCGIKPND 1147
Query: 495 TLFVSLLSACAQCGLEKEGWMWFNAMIDEYNITPTVAHYACMVELLARQGKIREAVEFVK 554
+F+S+LSAC+ CGL+ EGW WF +M ++Y ITP +AHYACMV+LL+RQG I +A+ FVK
Sbjct: 1148 IIFLSVLSACSHCGLKNEGWNWFYSMKEKYGITPKLAHYACMVDLLSRQGHIEQALHFVK 1207
Query: 555 KMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAML 599
KM +EPD RIWGAL AGC+++ G I + +V++L+ L+P NS + M+
Sbjct: 1208 KMPMEPDKRIWGALLAGCRVSPGPIKIVEFVVERLSTLDPQNSTHYYMI 1254
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP320_ARATH | 1.1e-86 | 32.26 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
| PP341_ARATH | 6.6e-81 | 29.45 | Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN... | [more] |
| PPR32_ARATH | 1.5e-80 | 29.27 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
| PP359_ARATH | 3.3e-80 | 30.94 | Pentatricopeptide repeat-containing protein At4g39952, mitochondrial OS=Arabidop... | [more] |
| PP296_ARATH | 2.4e-78 | 29.89 | Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L489_CUCSA | 2.9e-261 | 81.09 | Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122420 PE=4 SV=1 | [more] |
| A5C4V9_VITVI | 2.0e-193 | 56.94 | Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040403 PE=4 SV=1 | [more] |
| A0A061DV61_THECC | 2.6e-172 | 51.78 | Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM... | [more] |
| A0A0D2RE34_GOSRA | 1.7e-171 | 52.00 | Uncharacterized protein OS=Gossypium raimondii GN=B456_008G121600 PE=4 SV=1 | [more] |
| A0A0J8D8C3_BETVU | 1.2e-166 | 49.74 | Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g004700 PE=4 S... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G18750.1 | 6.0e-88 | 32.26 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G30700.1 | 3.7e-82 | 29.45 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G11290.1 | 8.3e-82 | 29.27 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G39952.1 | 1.9e-81 | 30.94 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G63370.1 | 1.3e-79 | 29.89 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
